Query 005747
Match_columns 679
No_of_seqs 672 out of 3521
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 06:21:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005747.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005747hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 3E-40 2.2E-44 328.0 19.0 244 129-387 19-277 (277)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 2.3E-20 1.7E-24 188.7 12.1 224 440-676 50-287 (313)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.8 5.6E-20 4.1E-24 181.0 13.7 194 441-671 11-208 (266)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.8 5.4E-19 3.9E-23 177.9 16.9 223 440-676 31-260 (305)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 1.2E-18 8.5E-23 173.4 14.2 216 444-672 15-239 (284)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.8E-18 1.3E-22 170.0 12.3 155 440-602 31-188 (266)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 9.8E-19 7.1E-23 176.6 8.9 219 440-673 76-307 (313)
8 d2omza2 c.10.2.1 (A:33-416) In 99.7 2E-17 1.5E-21 171.9 17.4 215 440-675 66-368 (384)
9 d2omza2 c.10.2.1 (A:33-416) In 99.7 2.5E-17 1.8E-21 171.2 16.4 218 440-674 44-345 (384)
10 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.5E-16 1.1E-20 152.2 16.3 186 440-667 41-226 (227)
11 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1E-16 7.6E-21 151.1 13.5 147 440-600 46-192 (210)
12 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.5E-16 1.1E-20 159.6 15.0 220 441-677 11-238 (305)
13 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.8E-16 1.3E-20 149.4 13.6 167 460-667 43-209 (210)
14 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.4E-16 1E-20 148.8 12.1 126 440-579 40-165 (199)
15 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 2.3E-16 1.7E-20 156.5 13.7 194 440-641 32-236 (284)
16 d2omxa2 c.10.2.1 (A:37-235) In 99.6 4.2E-16 3.1E-20 145.6 13.7 126 462-600 39-164 (199)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 7.1E-16 5.1E-20 147.4 11.8 186 448-675 27-212 (227)
18 d1dcea3 c.10.2.2 (A:444-567) R 99.6 2.1E-15 1.5E-19 128.4 10.5 103 466-577 1-103 (124)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 4.8E-15 3.5E-19 143.1 13.5 219 443-675 11-240 (242)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 2.3E-15 1.7E-19 139.5 10.6 127 443-579 11-141 (192)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 9.2E-15 6.7E-19 149.4 14.9 94 441-545 39-132 (353)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.6 7.5E-15 5.5E-19 124.9 10.8 120 443-569 1-122 (124)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 3.6E-15 2.6E-19 133.5 8.0 114 459-580 14-128 (162)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 4.3E-15 3.2E-19 133.0 7.4 126 440-570 18-145 (162)
25 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 5.7E-14 4.1E-18 143.4 16.6 215 440-675 58-341 (353)
26 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 1.4E-14 1E-18 139.8 9.5 192 440-639 29-234 (242)
27 d1m9la_ c.10.3.1 (A:) Outer ar 99.4 1.9E-15 1.4E-19 140.4 -4.2 130 441-579 24-155 (198)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 1.4E-13 1E-17 127.3 8.2 108 465-582 10-120 (192)
29 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.9E-13 1.4E-17 126.6 -1.6 128 440-570 48-180 (198)
30 d2astb2 c.10.1.3 (B:2136-2419) 99.2 1.1E-12 8.3E-17 129.1 3.6 154 440-597 46-211 (284)
31 d2astb2 c.10.1.3 (B:2136-2419) 99.2 1.8E-12 1.3E-16 127.7 4.7 149 444-597 27-186 (284)
32 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.2 2.1E-11 1.6E-15 119.6 9.8 200 125-338 7-257 (283)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 3.7E-11 2.7E-15 106.1 8.6 105 486-597 9-114 (156)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.1 1.7E-11 1.3E-15 124.3 6.0 230 440-673 31-317 (344)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 1.6E-10 1.1E-14 102.0 10.2 101 443-545 11-115 (156)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.0 8.7E-11 6.3E-15 123.7 3.9 39 631-671 370-410 (460)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 6.1E-11 4.4E-15 124.9 0.2 34 464-497 85-124 (460)
38 d1sxjb2 c.37.1.20 (B:7-230) Re 98.9 4.2E-09 3.1E-13 99.1 12.6 186 126-326 11-199 (224)
39 d1sxjc2 c.37.1.20 (C:12-238) R 98.9 6.5E-09 4.7E-13 98.0 13.6 181 127-323 11-194 (227)
40 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.8 4.8E-10 3.5E-14 113.4 3.5 218 454-672 22-287 (344)
41 d1iqpa2 c.37.1.20 (A:2-232) Re 98.8 1E-08 7.5E-13 96.9 11.1 181 127-324 21-205 (231)
42 d1njfa_ c.37.1.20 (A:) delta p 98.8 1.2E-07 8.4E-12 89.8 18.6 185 127-329 9-217 (239)
43 d1fnna2 c.37.1.20 (A:1-276) CD 98.7 4E-07 2.9E-11 87.9 20.2 171 129-300 15-206 (276)
44 d1r6bx2 c.37.1.20 (X:169-436) 98.7 2.4E-07 1.7E-11 87.7 16.2 155 131-299 19-194 (268)
45 d1sxjd2 c.37.1.20 (D:26-262) R 98.7 3.1E-08 2.3E-12 93.8 9.9 191 127-323 9-203 (237)
46 d1sxje2 c.37.1.20 (E:4-255) Re 98.6 8.1E-08 5.9E-12 91.8 11.2 193 127-325 8-229 (252)
47 d1sxja2 c.37.1.20 (A:295-547) 98.5 3.5E-07 2.5E-11 87.3 12.4 188 127-327 11-225 (253)
48 d1w5sa2 c.37.1.20 (A:7-293) CD 98.5 2.9E-06 2.1E-10 82.2 18.5 172 129-300 15-223 (287)
49 d1in4a2 c.37.1.20 (A:17-254) H 98.4 1E-05 7.6E-10 75.9 21.5 174 127-329 6-206 (238)
50 d1a5ta2 c.37.1.20 (A:1-207) de 98.4 2.7E-06 2E-10 77.9 16.7 170 134-326 6-201 (207)
51 d1ixza_ c.37.1.20 (A:) AAA dom 98.4 8.4E-07 6.1E-11 83.6 13.3 176 126-323 5-214 (247)
52 d1lv7a_ c.37.1.20 (A:) AAA dom 98.4 2.2E-06 1.6E-10 80.9 14.4 174 129-324 11-218 (256)
53 d1ixsb2 c.37.1.20 (B:4-242) Ho 98.4 8.6E-06 6.3E-10 76.5 18.7 176 127-330 6-208 (239)
54 d1jbka_ c.37.1.20 (A:) ClpB, A 98.3 8.9E-07 6.5E-11 78.8 10.1 150 131-294 23-193 (195)
55 d1e32a2 c.37.1.20 (A:201-458) 98.3 4.6E-06 3.4E-10 79.2 14.6 173 130-324 4-208 (258)
56 d1koha1 c.10.2.3 (A:201-362) m 98.2 3.4E-08 2.5E-12 87.3 -3.3 88 482-570 62-152 (162)
57 d1qvra2 c.37.1.20 (A:149-535) 98.2 9.9E-06 7.2E-10 80.9 14.2 155 131-299 23-197 (387)
58 d1koha1 c.10.2.3 (A:201-362) m 98.2 2.9E-08 2.1E-12 87.7 -4.1 119 464-592 23-152 (162)
59 d1r7ra3 c.37.1.20 (A:471-735) 98.1 4.5E-06 3.3E-10 79.5 9.8 151 151-323 41-213 (265)
60 d1l8qa2 c.37.1.20 (A:77-289) C 98.0 2.1E-05 1.5E-09 72.0 12.4 130 152-300 37-179 (213)
61 d1d2na_ c.37.1.20 (A:) Hexamer 97.8 3.1E-05 2.3E-09 72.5 10.4 91 131-240 10-110 (246)
62 d1pgva_ c.10.1.1 (A:) Tropomod 97.8 7.8E-06 5.7E-10 72.0 5.7 93 481-573 40-140 (167)
63 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 4.4E-05 3.2E-09 67.0 6.1 104 440-544 15-142 (167)
64 d2gnoa2 c.37.1.20 (A:11-208) g 97.5 0.00035 2.6E-08 62.6 11.2 130 139-286 3-138 (198)
65 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 0.0002 1.4E-08 62.5 5.1 111 461-574 15-142 (166)
66 d1io0a_ c.10.1.1 (A:) Tropomod 97.0 0.00033 2.4E-08 61.0 5.5 105 440-545 17-144 (166)
67 d1mo6a1 c.37.1.11 (A:1-269) Re 96.9 0.0028 2.1E-07 59.1 11.0 84 151-241 60-149 (269)
68 d1qvra3 c.37.1.20 (A:536-850) 96.8 0.00084 6.1E-08 64.9 6.6 105 131-242 24-137 (315)
69 d1xp8a1 c.37.1.11 (A:15-282) R 96.7 0.0035 2.6E-07 58.5 10.3 84 151-241 57-146 (268)
70 d1okkd2 c.37.1.10 (D:97-303) G 96.6 0.0058 4.2E-07 54.4 10.8 60 149-210 4-64 (207)
71 d2qy9a2 c.37.1.10 (A:285-495) 96.6 0.0069 5E-07 54.0 11.2 61 148-211 6-68 (211)
72 d1np6a_ c.37.1.10 (A:) Molybdo 96.6 0.00059 4.3E-08 59.4 3.7 28 151-178 2-29 (170)
73 d1r6bx3 c.37.1.20 (X:437-751) 96.6 0.0019 1.4E-07 62.4 7.7 102 131-242 23-133 (315)
74 d1kaga_ c.37.1.2 (A:) Shikimat 96.6 0.00051 3.7E-08 59.4 3.2 25 152-176 3-27 (169)
75 d1m8pa3 c.37.1.15 (A:391-573) 96.5 0.00094 6.8E-08 58.6 4.8 38 150-188 5-42 (183)
76 d1u94a1 c.37.1.11 (A:6-268) Re 96.5 0.0056 4.1E-07 57.0 10.4 83 151-240 54-142 (263)
77 d1ls1a2 c.37.1.10 (A:89-295) G 96.5 0.007 5.1E-07 54.0 10.5 59 150-210 9-68 (207)
78 d1lw7a2 c.37.1.1 (A:220-411) T 96.5 0.00066 4.8E-08 60.1 3.6 26 151-176 7-32 (192)
79 d1yj5a2 c.37.1.1 (A:351-522) 5 96.4 0.0015 1.1E-07 56.9 5.3 26 149-174 12-37 (172)
80 d1vmaa2 c.37.1.10 (A:82-294) G 96.3 0.011 7.8E-07 52.9 10.6 60 149-210 9-69 (213)
81 d1ly1a_ c.37.1.1 (A:) Polynucl 96.3 0.001 7.5E-08 56.6 3.6 24 152-175 3-26 (152)
82 d1tf7a2 c.37.1.11 (A:256-497) 96.3 0.0082 5.9E-07 55.3 10.3 41 150-192 25-65 (242)
83 d2bdta1 c.37.1.25 (A:1-176) Hy 96.3 0.0011 7.8E-08 57.8 3.7 25 152-176 3-27 (176)
84 d1rz3a_ c.37.1.6 (A:) Hypothet 96.3 0.0025 1.9E-07 56.7 6.2 31 148-178 19-49 (198)
85 d1j8yf2 c.37.1.10 (F:87-297) G 96.2 0.012 8.8E-07 52.4 10.3 60 149-210 10-70 (211)
86 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.2 0.0015 1.1E-07 58.2 4.0 29 148-176 3-31 (194)
87 d1rkba_ c.37.1.1 (A:) Adenylat 96.1 0.0013 9.3E-08 57.3 3.2 25 152-176 5-29 (173)
88 d1knqa_ c.37.1.17 (A:) Glucona 96.1 0.0017 1.3E-07 56.3 4.1 28 149-176 4-31 (171)
89 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.1 0.0018 1.3E-07 57.0 4.2 27 152-178 2-28 (189)
90 d1xjca_ c.37.1.10 (A:) Molybdo 96.1 0.0019 1.4E-07 55.8 4.1 27 152-178 2-28 (165)
91 d1ofha_ c.37.1.20 (A:) HslU {H 96.0 0.0025 1.8E-07 61.4 4.8 46 131-176 15-74 (309)
92 d1qhxa_ c.37.1.3 (A:) Chloramp 95.9 0.0023 1.7E-07 55.8 3.8 26 151-176 3-28 (178)
93 d1khta_ c.37.1.1 (A:) Adenylat 95.9 0.0023 1.7E-07 56.3 3.8 27 152-178 2-28 (190)
94 d1x6va3 c.37.1.4 (A:34-228) Ad 95.9 0.0019 1.4E-07 57.4 3.3 28 151-178 19-46 (195)
95 d1ukza_ c.37.1.1 (A:) Uridylat 95.8 0.0026 1.9E-07 56.7 4.0 29 148-176 5-33 (196)
96 d1viaa_ c.37.1.2 (A:) Shikimat 95.8 0.0023 1.7E-07 55.1 3.4 24 154-177 3-26 (161)
97 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.8 0.0033 2.4E-07 54.7 4.5 27 150-176 3-29 (176)
98 d1ihua2 c.37.1.10 (A:308-586) 95.8 0.005 3.7E-07 58.2 6.1 52 139-192 8-59 (279)
99 d2iyva1 c.37.1.2 (A:2-166) Shi 95.8 0.0024 1.8E-07 55.1 3.5 24 154-177 4-27 (165)
100 d2jdid3 c.37.1.11 (D:82-357) C 95.7 0.018 1.3E-06 53.3 9.6 100 141-241 57-179 (276)
101 d1e6ca_ c.37.1.2 (A:) Shikimat 95.7 0.0024 1.7E-07 55.5 3.2 26 152-177 3-28 (170)
102 d1gvnb_ c.37.1.21 (B:) Plasmid 95.7 0.0054 3.9E-07 57.7 5.8 28 150-177 31-58 (273)
103 d1y63a_ c.37.1.1 (A:) Probable 95.6 0.0036 2.7E-07 54.3 4.1 27 150-176 4-30 (174)
104 d1bifa1 c.37.1.7 (A:37-249) 6- 95.5 0.0035 2.6E-07 56.5 3.7 26 152-177 3-28 (213)
105 d1szpa2 c.37.1.11 (A:145-395) 95.4 0.023 1.7E-06 52.1 9.2 47 151-197 34-84 (251)
106 d1ye8a1 c.37.1.11 (A:1-178) Hy 95.4 0.0041 3E-07 54.2 3.5 24 154-177 3-26 (178)
107 d1nksa_ c.37.1.1 (A:) Adenylat 95.3 0.0053 3.8E-07 54.1 3.9 27 152-178 2-28 (194)
108 d1sq5a_ c.37.1.6 (A:) Pantothe 95.3 0.046 3.4E-06 51.6 10.8 47 150-196 79-125 (308)
109 d2qm8a1 c.37.1.10 (A:5-327) Me 95.2 0.012 8.9E-07 56.4 6.6 56 139-194 37-94 (323)
110 d1w44a_ c.37.1.11 (A:) NTPase 95.2 0.013 9.1E-07 55.9 6.5 70 152-241 124-193 (321)
111 d2p67a1 c.37.1.10 (A:1-327) LA 95.2 0.012 8.8E-07 56.5 6.5 56 148-203 51-106 (327)
112 d1cp2a_ c.37.1.10 (A:) Nitroge 95.2 0.0095 6.9E-07 55.9 5.6 38 152-191 2-39 (269)
113 d1ckea_ c.37.1.1 (A:) CMP kina 95.1 0.0061 4.4E-07 55.4 3.8 41 151-204 3-43 (225)
114 d1ihua1 c.37.1.10 (A:1-296) Ar 95.0 0.014 9.9E-07 55.6 6.4 47 148-196 5-51 (296)
115 d1teva_ c.37.1.1 (A:) UMP/CMP 95.0 0.0068 5E-07 53.7 3.7 25 152-176 2-26 (194)
116 d1m7ga_ c.37.1.4 (A:) Adenosin 95.0 0.011 7.8E-07 53.0 5.0 30 147-176 20-49 (208)
117 d1uj2a_ c.37.1.6 (A:) Uridine- 95.0 0.007 5.1E-07 54.6 3.8 27 151-177 2-28 (213)
118 d1g8pa_ c.37.1.20 (A:) ATPase 94.9 0.0068 5E-07 59.0 3.9 48 127-174 4-51 (333)
119 d1lvga_ c.37.1.1 (A:) Guanylat 94.8 0.0073 5.3E-07 53.4 3.3 25 153-177 2-26 (190)
120 d1znwa1 c.37.1.1 (A:20-201) Gu 94.7 0.0086 6.3E-07 52.4 3.7 25 152-176 3-27 (182)
121 d1q3ta_ c.37.1.1 (A:) CMP kina 94.7 0.0085 6.2E-07 54.4 3.7 41 153-206 5-45 (223)
122 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.6 0.0099 7.2E-07 52.4 3.9 26 150-176 3-28 (190)
123 d1gkya_ c.37.1.1 (A:) Guanylat 94.6 0.008 5.8E-07 52.9 3.1 26 152-177 2-27 (186)
124 d3adka_ c.37.1.1 (A:) Adenylat 94.5 0.011 8.2E-07 52.3 3.8 27 150-176 7-33 (194)
125 d1xpua3 c.37.1.11 (A:129-417) 94.4 0.016 1.1E-06 54.1 4.8 98 141-242 32-142 (289)
126 d1zina1 c.37.1.1 (A:1-125,A:16 94.4 0.01 7.5E-07 51.8 3.4 23 154-176 3-25 (182)
127 d1kgda_ c.37.1.1 (A:) Guanylat 94.4 0.011 8.3E-07 51.4 3.6 26 151-176 3-28 (178)
128 d1zaka1 c.37.1.1 (A:3-127,A:15 94.4 0.01 7.6E-07 52.2 3.4 25 152-176 4-28 (189)
129 d1odfa_ c.37.1.6 (A:) Hypothet 94.2 0.043 3.2E-06 51.1 7.5 79 151-229 27-113 (286)
130 d2ak3a1 c.37.1.1 (A:0-124,A:16 94.2 0.012 9E-07 51.7 3.4 24 153-176 8-31 (189)
131 d2cdna1 c.37.1.1 (A:1-181) Ade 94.2 0.013 9.4E-07 51.2 3.5 23 154-176 3-25 (181)
132 d1s3ga1 c.37.1.1 (A:1-125,A:16 94.1 0.014 9.9E-07 51.1 3.4 23 154-176 3-25 (182)
133 d2afhe1 c.37.1.10 (E:1-289) Ni 94.0 0.023 1.7E-06 53.8 5.3 40 151-192 2-41 (289)
134 d1hyqa_ c.37.1.10 (A:) Cell di 93.9 0.024 1.7E-06 51.5 5.0 39 151-191 1-40 (232)
135 d1akya1 c.37.1.1 (A:3-130,A:16 93.7 0.017 1.3E-06 50.3 3.5 23 154-176 5-27 (180)
136 d1pzna2 c.37.1.11 (A:96-349) D 93.7 0.068 5E-06 48.9 7.9 48 151-198 36-87 (254)
137 d1e4va1 c.37.1.1 (A:1-121,A:15 93.6 0.019 1.4E-06 50.0 3.4 23 154-176 3-25 (179)
138 d1s96a_ c.37.1.1 (A:) Guanylat 93.6 0.022 1.6E-06 50.7 3.8 25 152-176 3-27 (205)
139 d1uf9a_ c.37.1.1 (A:) Dephosph 93.4 0.018 1.3E-06 50.6 3.1 22 151-172 3-24 (191)
140 d1um8a_ c.37.1.20 (A:) ClpX {H 93.4 0.033 2.4E-06 54.3 5.2 26 150-175 67-92 (364)
141 d1g2912 c.37.1.12 (1:1-240) Ma 93.2 0.023 1.7E-06 51.6 3.4 25 151-175 29-53 (240)
142 d1ny5a2 c.37.1.20 (A:138-384) 93.2 0.062 4.5E-06 49.2 6.5 45 132-176 2-48 (247)
143 d2awna2 c.37.1.12 (A:4-235) Ma 93.1 0.025 1.8E-06 51.1 3.3 25 151-175 26-50 (232)
144 d1l2ta_ c.37.1.12 (A:) MJ0796 93.0 0.022 1.6E-06 51.4 2.8 25 151-175 31-55 (230)
145 d1yrba1 c.37.1.10 (A:1-244) AT 93.0 0.032 2.3E-06 51.0 4.2 25 153-177 2-26 (244)
146 d1sgwa_ c.37.1.12 (A:) Putativ 92.9 0.018 1.3E-06 51.0 2.3 26 151-176 27-52 (200)
147 d3dhwc1 c.37.1.12 (C:1-240) Me 92.8 0.023 1.6E-06 51.6 2.7 25 152-176 32-56 (240)
148 d2vp4a1 c.37.1.1 (A:12-208) De 92.8 0.021 1.5E-06 50.5 2.5 27 149-175 7-33 (197)
149 d1v43a3 c.37.1.12 (A:7-245) Hy 92.8 0.028 2E-06 50.9 3.3 26 151-176 32-57 (239)
150 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.8 0.03 2.2E-06 47.2 3.4 22 154-175 3-24 (160)
151 d1fx0a3 c.37.1.11 (A:97-372) C 92.7 0.099 7.2E-06 48.3 7.1 89 152-242 68-171 (276)
152 d2pmka1 c.37.1.12 (A:467-707) 92.6 0.029 2.1E-06 51.1 3.2 25 152-176 30-54 (241)
153 d2onka1 c.37.1.12 (A:1-240) Mo 92.6 0.032 2.3E-06 50.5 3.3 25 152-176 25-49 (240)
154 d1v5wa_ c.37.1.11 (A:) Meiotic 92.4 0.11 8E-06 47.5 7.3 47 151-197 37-87 (258)
155 d1b0ua_ c.37.1.12 (A:) ATP-bin 92.4 0.028 2E-06 51.8 2.8 25 151-175 28-52 (258)
156 d1g3qa_ c.37.1.10 (A:) Cell di 92.4 0.054 3.9E-06 49.1 4.9 37 152-190 3-40 (237)
157 d1a7ja_ c.37.1.6 (A:) Phosphor 92.4 0.022 1.6E-06 53.2 2.0 27 150-176 3-29 (288)
158 d3b60a1 c.37.1.12 (A:329-581) 92.3 0.031 2.3E-06 51.3 3.1 25 151-175 41-65 (253)
159 d3d31a2 c.37.1.12 (A:1-229) Su 92.3 0.028 2E-06 50.6 2.6 26 151-176 26-51 (229)
160 d1jj7a_ c.37.1.12 (A:) Peptide 92.3 0.034 2.5E-06 51.0 3.2 26 151-176 40-65 (251)
161 d1upta_ c.37.1.8 (A:) ADP-ribo 92.2 0.034 2.5E-06 47.3 3.0 22 154-175 8-29 (169)
162 d1r0wa_ c.37.1.12 (A:) Cystic 92.2 0.035 2.5E-06 51.9 3.3 26 151-176 62-87 (281)
163 d1svma_ c.37.1.20 (A:) Papillo 92.1 0.086 6.2E-06 51.2 6.1 29 149-177 152-180 (362)
164 d1mv5a_ c.37.1.12 (A:) Multidr 92.1 0.037 2.7E-06 50.5 3.2 25 151-175 28-52 (242)
165 d1svia_ c.37.1.8 (A:) Probable 92.0 0.042 3.1E-06 48.3 3.4 26 149-174 21-46 (195)
166 d1cr2a_ c.37.1.11 (A:) Gene 4 91.8 0.47 3.4E-05 43.7 11.1 52 152-206 36-87 (277)
167 d1n0wa_ c.37.1.11 (A:) DNA rep 91.7 0.21 1.5E-05 44.3 8.2 47 151-197 23-73 (242)
168 d2ocpa1 c.37.1.1 (A:37-277) De 91.7 0.051 3.7E-06 49.6 3.7 28 150-177 1-28 (241)
169 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.6 0.07 5.1E-06 45.8 4.5 34 140-174 5-38 (177)
170 d1tf7a1 c.37.1.11 (A:14-255) C 91.6 0.16 1.2E-05 45.6 7.4 40 151-191 26-65 (242)
171 d1htwa_ c.37.1.18 (A:) Hypothe 91.5 0.16 1.1E-05 42.4 6.3 29 150-178 32-60 (158)
172 d1z06a1 c.37.1.8 (A:32-196) Ra 91.5 0.047 3.4E-06 46.5 3.0 21 154-174 5-25 (165)
173 d1z0fa1 c.37.1.8 (A:8-173) Rab 91.3 0.049 3.6E-06 46.4 3.0 21 154-174 7-27 (166)
174 d1oxxk2 c.37.1.12 (K:1-242) Gl 91.3 0.033 2.4E-06 50.5 1.9 25 151-175 31-55 (242)
175 d2i1qa2 c.37.1.11 (A:65-322) D 91.3 0.12 8.9E-06 47.0 6.1 56 151-207 34-103 (258)
176 d2a5ja1 c.37.1.8 (A:9-181) Rab 91.3 0.049 3.6E-06 46.8 3.0 21 154-174 6-26 (173)
177 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.3 0.068 4.9E-06 46.1 4.0 24 151-174 13-36 (186)
178 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.2 0.056 4.1E-06 45.9 3.3 21 154-174 5-25 (164)
179 d1ji0a_ c.37.1.12 (A:) Branche 91.2 0.047 3.4E-06 49.7 2.8 26 151-176 32-57 (240)
180 d1nn5a_ c.37.1.1 (A:) Thymidyl 91.2 0.078 5.7E-06 47.2 4.3 27 152-178 4-30 (209)
181 d2jdia3 c.37.1.11 (A:95-379) C 91.1 0.31 2.3E-05 45.0 8.6 100 142-241 58-179 (285)
182 d1kaoa_ c.37.1.8 (A:) Rap2a {H 91.0 0.055 4E-06 46.1 3.0 22 153-174 5-26 (167)
183 d1vpla_ c.37.1.12 (A:) Putativ 90.9 0.051 3.7E-06 49.3 2.8 26 151-176 28-53 (238)
184 d2eyqa3 c.37.1.19 (A:546-778) 90.9 1.6 0.00011 38.8 13.0 44 134-177 59-102 (233)
185 d2erxa1 c.37.1.8 (A:6-176) di- 90.9 0.051 3.7E-06 46.6 2.7 21 154-174 5-25 (171)
186 d3raba_ c.37.1.8 (A:) Rab3a {R 90.9 0.058 4.2E-06 46.1 3.0 21 154-174 8-28 (169)
187 d1yzqa1 c.37.1.8 (A:14-177) Ra 90.8 0.057 4.2E-06 45.8 2.9 22 154-175 3-24 (164)
188 d1z0ja1 c.37.1.8 (A:2-168) Rab 90.8 0.059 4.3E-06 45.9 3.0 22 154-175 7-28 (167)
189 d1g6ha_ c.37.1.12 (A:) MJ1267 90.8 0.053 3.9E-06 49.8 2.8 25 152-176 31-55 (254)
190 d2ew1a1 c.37.1.8 (A:4-174) Rab 90.8 0.058 4.2E-06 46.2 2.9 22 153-174 7-28 (171)
191 d1z08a1 c.37.1.8 (A:17-183) Ra 90.7 0.06 4.4E-06 45.9 3.0 21 154-174 6-26 (167)
192 d1tmka_ c.37.1.1 (A:) Thymidyl 90.7 0.2 1.4E-05 44.6 6.7 28 150-177 2-29 (214)
193 d1p5zb_ c.37.1.1 (B:) Deoxycyt 90.7 0.038 2.7E-06 50.4 1.7 26 151-176 2-27 (241)
194 d1gsia_ c.37.1.1 (A:) Thymidyl 90.6 0.11 8.1E-06 45.9 4.9 26 153-178 2-27 (208)
195 d2atva1 c.37.1.8 (A:5-172) Ras 90.6 0.064 4.6E-06 45.8 3.0 22 154-175 5-26 (168)
196 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.5 0.063 4.6E-06 45.6 2.9 21 154-174 5-25 (165)
197 d1vhta_ c.37.1.1 (A:) Dephosph 90.5 0.067 4.8E-06 47.6 3.2 19 153-171 5-23 (208)
198 d1g41a_ c.37.1.20 (A:) HslU {H 90.5 0.13 9.1E-06 51.4 5.6 47 131-177 15-75 (443)
199 d1r2qa_ c.37.1.8 (A:) Rab5a {H 90.5 0.066 4.8E-06 45.8 3.0 23 153-175 8-30 (170)
200 d2fn4a1 c.37.1.8 (A:24-196) r- 90.4 0.064 4.7E-06 46.0 2.9 22 153-174 8-29 (173)
201 d1ky3a_ c.37.1.8 (A:) Rab-rela 90.4 0.067 4.9E-06 45.9 3.0 21 154-174 5-25 (175)
202 d1g16a_ c.37.1.8 (A:) Rab-rela 90.3 0.072 5.3E-06 45.3 3.2 22 154-175 5-26 (166)
203 d2gjsa1 c.37.1.8 (A:91-258) Ra 90.3 0.067 4.9E-06 45.6 2.9 21 154-174 4-24 (168)
204 d1mkya1 c.37.1.8 (A:2-172) Pro 90.3 0.077 5.6E-06 45.3 3.3 22 153-174 2-23 (171)
205 d2erya1 c.37.1.8 (A:10-180) r- 90.2 0.068 5E-06 45.7 2.9 22 153-174 7-28 (171)
206 d1c1ya_ c.37.1.8 (A:) Rap1A {H 90.2 0.071 5.2E-06 45.4 3.0 22 154-175 6-27 (167)
207 d1l7vc_ c.37.1.12 (C:) ABC tra 90.1 0.058 4.2E-06 48.8 2.4 23 152-174 26-48 (231)
208 d1xtqa1 c.37.1.8 (A:3-169) GTP 90.1 0.075 5.5E-06 45.2 3.1 23 152-174 5-27 (167)
209 d1svsa1 c.37.1.8 (A:32-60,A:18 90.1 0.09 6.5E-06 45.8 3.7 22 154-175 5-26 (195)
210 d1nija1 c.37.1.10 (A:2-223) Hy 90.1 0.077 5.6E-06 47.7 3.3 25 150-174 2-26 (222)
211 d1jjva_ c.37.1.1 (A:) Dephosph 90.0 0.077 5.6E-06 47.0 3.2 20 152-171 3-22 (205)
212 d4tmka_ c.37.1.1 (A:) Thymidyl 90.0 0.23 1.7E-05 43.9 6.5 36 152-188 3-38 (210)
213 d2fh5b1 c.37.1.8 (B:63-269) Si 89.9 0.088 6.4E-06 46.6 3.5 24 152-175 1-24 (207)
214 d2bmea1 c.37.1.8 (A:6-179) Rab 89.9 0.075 5.4E-06 45.6 2.9 21 154-174 8-28 (174)
215 d1ctqa_ c.37.1.8 (A:) cH-p21 R 89.9 0.076 5.5E-06 45.2 2.9 22 154-175 6-27 (166)
216 d1u0la2 c.37.1.8 (A:69-293) Pr 89.8 0.14 1E-05 45.6 4.7 34 139-175 86-119 (225)
217 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 89.8 0.077 5.6E-06 45.7 2.9 23 153-175 4-26 (177)
218 d1mh1a_ c.37.1.8 (A:) Rac {Hum 89.8 0.079 5.7E-06 45.9 3.0 23 153-175 7-29 (183)
219 d2hyda1 c.37.1.12 (A:324-578) 89.8 0.049 3.5E-06 50.0 1.6 24 151-174 44-67 (255)
220 d1nrjb_ c.37.1.8 (B:) Signal r 89.8 0.092 6.7E-06 46.4 3.5 23 152-174 4-26 (209)
221 d2f7sa1 c.37.1.8 (A:5-190) Rab 89.7 0.073 5.3E-06 46.2 2.7 21 154-174 8-28 (186)
222 d2f9la1 c.37.1.8 (A:8-182) Rab 89.7 0.082 6E-06 45.4 3.0 21 154-174 7-27 (175)
223 d2qtvb1 c.37.1.8 (B:24-189) SA 89.7 0.09 6.5E-06 44.1 3.3 22 153-174 2-23 (166)
224 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 89.6 0.086 6.2E-06 45.0 3.0 22 154-175 6-27 (170)
225 d1fzqa_ c.37.1.8 (A:) ADP-ribo 89.5 0.081 5.9E-06 45.4 2.8 22 153-174 18-39 (176)
226 d1wf3a1 c.37.1.8 (A:3-180) GTP 89.5 0.091 6.7E-06 45.2 3.2 24 151-174 5-28 (178)
227 d1byia_ c.37.1.10 (A:) Dethiob 89.5 0.098 7.2E-06 46.7 3.5 35 152-188 2-37 (224)
228 d2g6ba1 c.37.1.8 (A:58-227) Ra 89.3 0.1 7.3E-06 44.5 3.3 22 153-174 8-29 (170)
229 d2atxa1 c.37.1.8 (A:9-193) Rho 89.3 0.088 6.4E-06 45.7 2.9 22 154-175 12-33 (185)
230 d2bcgy1 c.37.1.8 (Y:3-196) GTP 89.3 0.088 6.4E-06 46.1 2.9 22 154-175 9-30 (194)
231 d1egaa1 c.37.1.8 (A:4-182) GTP 89.2 0.097 7E-06 44.9 3.2 24 151-174 5-28 (179)
232 d1zd9a1 c.37.1.8 (A:18-181) AD 89.1 0.099 7.2E-06 44.3 3.0 22 154-175 5-26 (164)
233 d1u8za_ c.37.1.8 (A:) Ras-rela 89.0 0.1 7.3E-06 44.5 3.0 24 152-175 5-28 (168)
234 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 89.0 0.11 7.8E-06 45.0 3.2 21 154-174 5-25 (184)
235 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 88.9 0.11 7.9E-06 45.4 3.3 21 154-174 5-25 (200)
236 d1zcba2 c.37.1.8 (A:47-75,A:20 88.9 0.098 7.1E-06 45.9 2.9 18 154-171 5-22 (200)
237 d1udxa2 c.37.1.8 (A:157-336) O 88.8 0.075 5.5E-06 45.9 2.1 21 154-174 4-24 (180)
238 d1deka_ c.37.1.1 (A:) Deoxynuc 88.8 0.12 9E-06 46.9 3.7 24 152-175 2-25 (241)
239 d2g3ya1 c.37.1.8 (A:73-244) GT 88.8 0.11 7.9E-06 44.4 3.1 22 153-174 5-26 (172)
240 d1wmsa_ c.37.1.8 (A:) Rab9a {H 88.7 0.11 7.8E-06 44.6 3.0 21 154-174 9-29 (174)
241 d1m7ba_ c.37.1.8 (A:) RhoE (RN 88.7 0.11 8.3E-06 44.7 3.2 22 154-175 5-26 (179)
242 d1x1ra1 c.37.1.8 (A:10-178) Ra 88.5 0.11 8.2E-06 44.2 3.0 22 154-175 7-28 (169)
243 d1x3sa1 c.37.1.8 (A:2-178) Rab 88.4 0.13 9.2E-06 44.2 3.3 22 154-175 10-31 (177)
244 d1lnza2 c.37.1.8 (A:158-342) O 88.3 0.091 6.6E-06 45.5 2.2 22 153-174 3-24 (185)
245 d2ngra_ c.37.1.8 (A:) CDC42 {H 88.2 0.12 8.4E-06 45.2 2.9 22 154-175 6-27 (191)
246 d2bmja1 c.37.1.8 (A:66-240) Ce 88.0 0.13 9.2E-06 44.2 3.0 23 153-175 7-29 (175)
247 d2cxxa1 c.37.1.8 (A:2-185) GTP 87.9 0.11 8.2E-06 44.8 2.6 22 153-174 2-23 (184)
248 d1i2ma_ c.37.1.8 (A:) Ran {Hum 87.8 0.072 5.2E-06 45.6 1.2 21 154-174 6-26 (170)
249 d1nlfa_ c.37.1.11 (A:) Hexamer 87.7 0.17 1.2E-05 46.9 4.0 26 152-177 30-55 (274)
250 d2gj8a1 c.37.1.8 (A:216-376) P 87.5 0.14 1.1E-05 42.9 3.0 21 154-174 4-24 (161)
251 d1azta2 c.37.1.8 (A:35-65,A:20 87.2 0.16 1.2E-05 45.3 3.4 23 152-174 7-29 (221)
252 d1moza_ c.37.1.8 (A:) ADP-ribo 87.0 0.11 8E-06 44.8 2.0 22 153-174 19-40 (182)
253 d1mkya2 c.37.1.8 (A:173-358) P 87.0 0.15 1.1E-05 44.0 2.9 22 153-174 10-31 (186)
254 d1kkma_ c.91.1.2 (A:) HPr kina 86.8 0.2 1.4E-05 42.7 3.4 23 152-174 15-37 (176)
255 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.7 0.2 1.5E-05 42.7 3.5 26 148-174 10-35 (173)
256 d2fu5c1 c.37.1.8 (C:3-175) Rab 86.2 0.11 8.1E-06 44.4 1.5 21 154-174 9-29 (173)
257 d1puia_ c.37.1.8 (A:) Probable 86.1 0.13 9.2E-06 44.4 1.9 24 150-173 15-38 (188)
258 d1ko7a2 c.91.1.2 (A:130-298) H 85.6 0.22 1.6E-05 42.1 3.1 23 152-174 16-38 (169)
259 d1knxa2 c.91.1.2 (A:133-309) H 85.4 0.2 1.5E-05 42.6 2.7 23 152-174 16-38 (177)
260 d2bv3a2 c.37.1.8 (A:7-282) Elo 85.4 0.26 1.9E-05 45.4 3.7 27 150-176 5-31 (276)
261 d1xzpa2 c.37.1.8 (A:212-371) T 84.5 0.1 7.3E-06 43.9 0.3 22 154-175 3-24 (160)
262 g1f2t.1 c.37.1.12 (A:,B:) Rad5 83.9 0.29 2.1E-05 45.4 3.5 24 151-174 23-46 (292)
263 d1w36d1 c.37.1.19 (D:2-360) Ex 83.8 0.51 3.7E-05 45.4 5.3 61 139-202 154-215 (359)
264 d1h65a_ c.37.1.8 (A:) Chloropl 83.4 0.52 3.8E-05 43.0 5.0 38 137-174 16-55 (257)
265 d2dy1a2 c.37.1.8 (A:8-274) Elo 83.0 0.44 3.2E-05 43.6 4.2 24 151-174 2-25 (267)
266 d1tuea_ c.37.1.20 (A:) Replica 81.5 0.62 4.5E-05 40.1 4.3 38 139-176 40-78 (205)
267 d1g7sa4 c.37.1.8 (A:1-227) Ini 80.4 0.52 3.8E-05 42.0 3.7 23 152-174 6-28 (227)
268 d1a1va1 c.37.1.14 (A:190-325) 80.0 1.1 7.9E-05 35.9 5.3 52 150-207 7-58 (136)
269 d1t9ha2 c.37.1.8 (A:68-298) Pr 79.6 0.23 1.7E-05 44.2 0.9 23 152-174 98-120 (231)
270 d1p6xa_ c.37.1.1 (A:) Thymidin 79.1 0.6 4.4E-05 44.2 3.7 28 151-178 6-33 (333)
271 d1g6oa_ c.37.1.11 (A:) Hexamer 78.5 0.53 3.9E-05 44.5 3.1 24 153-176 168-191 (323)
272 d1pjra1 c.37.1.19 (A:1-318) DE 78.4 0.81 5.9E-05 43.0 4.6 39 153-191 26-66 (318)
273 d1uaaa1 c.37.1.19 (A:2-307) DE 76.7 1.1 7.7E-05 41.7 4.8 55 152-207 15-71 (306)
274 d1wb1a4 c.37.1.8 (A:1-179) Elo 76.5 0.63 4.6E-05 39.6 2.8 21 153-173 7-27 (179)
275 d1n0ua2 c.37.1.8 (A:3-343) Elo 76.1 0.86 6.2E-05 43.2 3.9 34 142-175 7-41 (341)
276 g1ii8.1 c.37.1.12 (A:,B:) Rad5 76.0 0.7 5.1E-05 43.8 3.3 22 152-173 24-45 (369)
277 d1f5na2 c.37.1.8 (A:7-283) Int 75.6 0.91 6.6E-05 41.7 3.8 28 148-175 29-56 (277)
278 d1osna_ c.37.1.1 (A:) Thymidin 74.7 0.92 6.7E-05 42.8 3.7 25 153-177 7-31 (331)
279 d1p9ra_ c.37.1.11 (A:) Extrace 74.2 1.3 9.7E-05 43.1 4.9 40 136-176 144-183 (401)
280 g1xew.1 c.37.1.12 (X:,Y:) Smc 73.7 0.74 5.4E-05 43.5 2.8 23 152-174 27-49 (329)
281 d1qhla_ c.37.1.12 (A:) Cell di 73.1 0.34 2.5E-05 42.2 0.0 25 152-176 25-49 (222)
282 d1u0ja_ c.37.1.20 (A:) Rep 40 72.5 2 0.00014 39.1 5.3 37 139-175 90-128 (267)
283 d2c78a3 c.37.1.8 (A:9-212) Elo 71.0 1.2 9.1E-05 38.6 3.4 22 153-174 5-26 (204)
284 d1e2ka_ c.37.1.1 (A:) Thymidin 70.8 0.97 7.1E-05 42.5 2.7 25 152-176 5-29 (329)
285 d1gm5a3 c.37.1.19 (A:286-549) 70.5 9.2 0.00067 34.2 9.4 43 134-176 87-129 (264)
286 d1tq4a_ c.37.1.8 (A:) Interfer 69.9 1.6 0.00011 42.5 4.2 21 153-173 58-78 (400)
287 d1jala1 c.37.1.8 (A:1-278) Ych 67.8 1.4 0.0001 40.4 3.2 23 153-175 4-26 (278)
288 d1e69a_ c.37.1.12 (A:) Smc hea 63.9 1.5 0.00011 40.8 2.5 22 152-173 25-46 (308)
289 d1ni3a1 c.37.1.8 (A:11-306) Yc 61.5 2.1 0.00015 39.6 3.1 22 153-174 12-33 (296)
290 d1r0ka2 c.2.1.3 (A:3-126,A:265 59.9 8.2 0.00059 31.2 6.1 68 151-226 2-70 (150)
291 d1p3da1 c.5.1.1 (A:11-106) UDP 59.6 4.1 0.0003 30.2 3.9 25 150-174 7-31 (96)
292 d1wxqa1 c.37.1.8 (A:1-319) GTP 58.7 2.1 0.00016 40.0 2.6 23 154-176 3-25 (319)
293 d1puja_ c.37.1.8 (A:) Probable 58.4 2.3 0.00017 38.8 2.7 24 152-175 113-136 (273)
294 d1wp9a1 c.37.1.19 (A:1-200) pu 58.1 9.2 0.00067 32.2 6.8 20 154-173 26-45 (200)
295 d1w1wa_ c.37.1.12 (A:) Smc hea 58.0 2.9 0.00021 40.6 3.7 23 152-174 26-48 (427)
296 d1d2ea3 c.37.1.8 (A:55-250) El 54.6 3.3 0.00024 35.5 2.9 21 153-173 5-25 (196)
297 d1g8fa3 c.37.1.15 (A:390-511) 54.2 4.4 0.00032 31.3 3.3 24 153-176 8-31 (122)
298 d1wb9a2 c.37.1.12 (A:567-800) 54.0 4.3 0.00031 35.8 3.7 25 150-174 40-64 (234)
299 d1e9ra_ c.37.1.11 (A:) Bacteri 53.4 5.1 0.00037 39.0 4.6 25 152-176 51-75 (433)
300 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 52.8 6 0.00044 40.5 5.3 53 154-207 27-81 (623)
301 d2olra1 c.91.1.1 (A:228-540) P 50.1 3.8 0.00028 37.6 2.7 18 152-169 15-32 (313)
302 d1yksa1 c.37.1.14 (A:185-324) 49.9 4.1 0.0003 31.9 2.7 20 152-171 8-27 (140)
303 d1jnya3 c.37.1.8 (A:4-227) Elo 49.2 5 0.00036 35.1 3.3 23 153-175 5-27 (224)
304 d1j3ba1 c.91.1.1 (A:212-529) P 49.0 3.7 0.00027 37.9 2.4 19 152-170 15-33 (318)
305 d2p6ra3 c.37.1.19 (A:1-202) He 48.9 7.7 0.00056 33.0 4.6 17 154-170 43-59 (202)
306 d1kk1a3 c.37.1.8 (A:6-200) Ini 48.8 4.6 0.00033 34.4 2.9 21 153-173 7-27 (195)
307 d2fz4a1 c.37.1.19 (A:24-229) D 48.1 18 0.0013 30.7 6.9 42 132-176 69-110 (206)
308 d1t5la1 c.37.1.19 (A:2-414) Nu 47.8 17 0.0013 34.7 7.3 64 137-207 18-81 (413)
309 d1zunb3 c.37.1.8 (B:16-237) Su 47.3 5.7 0.00042 34.6 3.4 25 152-176 10-34 (222)
310 d1q0qa2 c.2.1.3 (A:1-125,A:275 46.7 33 0.0024 27.3 7.8 68 152-227 2-70 (151)
311 d1ii2a1 c.91.1.1 (A:201-523) P 45.1 5 0.00037 36.9 2.6 18 152-169 15-32 (323)
312 d2qn6a3 c.37.1.8 (A:2-206) Ini 43.8 6 0.00044 33.9 2.9 21 153-173 10-30 (205)
313 d1lkxa_ c.37.1.9 (A:) Myosin S 41.1 9.8 0.00071 39.4 4.5 31 146-176 81-111 (684)
314 d1d0xa2 c.37.1.9 (A:2-33,A:80- 40.3 10 0.00074 39.4 4.5 31 146-176 120-150 (712)
315 d1ewqa2 c.37.1.12 (A:542-765) 39.7 8.7 0.00063 33.5 3.3 23 152-174 36-58 (224)
316 d1c4oa1 c.37.1.19 (A:2-409) Nu 39.5 30 0.0022 32.9 7.6 64 137-207 15-78 (408)
317 d1br2a2 c.37.1.9 (A:80-789) My 38.4 11 0.00082 39.1 4.5 31 146-176 86-116 (710)
318 d1f60a3 c.37.1.8 (A:2-240) Elo 38.3 9.2 0.00067 33.7 3.3 24 153-176 8-31 (239)
319 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 37.9 8.1 0.00059 28.0 2.3 21 154-174 4-24 (89)
320 d1r5ba3 c.37.1.8 (A:215-459) E 37.2 7.4 0.00054 34.5 2.5 22 153-174 26-47 (245)
321 d1c9ka_ c.37.1.11 (A:) Adenosy 35.9 18 0.0013 29.9 4.7 35 154-194 2-36 (180)
322 d2mysa2 c.37.1.9 (A:4-33,A:80- 35.3 13 0.00094 39.2 4.4 31 146-176 118-148 (794)
323 d1j6ua3 c.72.2.1 (A:89-295) UD 35.0 13 0.00095 31.5 3.7 33 142-176 5-37 (207)
324 d2akab1 c.37.1.8 (B:6-304) Dyn 34.7 20 0.0015 32.3 5.3 25 150-174 25-49 (299)
325 d1kk8a2 c.37.1.9 (A:1-28,A:77- 34.5 14 0.001 38.9 4.4 32 145-176 115-146 (789)
326 d1w7ja2 c.37.1.9 (A:63-792) My 32.0 16 0.0012 38.0 4.5 31 146-176 89-119 (730)
327 d1o5za2 c.72.2.2 (A:-2-293) Fo 31.1 22 0.0016 32.2 4.8 37 139-177 29-67 (296)
328 d2gc6a2 c.72.2.2 (A:1-296) Fol 29.5 24 0.0018 31.8 4.8 37 139-177 25-63 (296)
329 d1p3da3 c.72.2.1 (A:107-321) U 28.7 29 0.0021 29.2 5.1 24 151-176 12-35 (215)
330 d1e8ca3 c.72.2.1 (A:104-337) U 28.7 16 0.0011 31.5 3.2 28 149-178 3-30 (234)
331 d1gkub1 c.37.1.16 (B:1-250) He 28.6 16 0.0011 31.8 3.2 22 153-174 60-81 (237)
332 d1jwyb_ c.37.1.8 (B:) Dynamin 27.4 29 0.0021 31.3 5.0 24 151-174 24-47 (306)
333 d2r25b1 c.23.1.1 (B:1087-1214) 26.7 80 0.0058 23.9 6.9 106 189-298 7-123 (128)
334 d2jfga1 c.5.1.1 (A:1-93) UDP-N 24.1 12 0.00086 27.1 1.1 22 152-174 6-27 (93)
335 d1bg2a_ c.37.1.9 (A:) Kinesin 22.7 29 0.0021 31.8 3.9 29 140-168 65-93 (323)
336 d1goja_ c.37.1.9 (A:) Kinesin 20.7 38 0.0028 31.4 4.4 30 139-168 68-97 (354)
337 d2pt0a1 c.45.1.4 (A:34-346) My 20.2 59 0.0043 29.3 5.4 42 135-176 195-237 (313)
338 d1w36b1 c.37.1.19 (B:1-485) Ex 20.0 28 0.002 33.6 3.4 24 151-174 16-40 (485)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=3e-40 Score=327.99 Aligned_cols=244 Identities=14% Similarity=0.135 Sum_probs=193.4
Q ss_pred cccccchHHHHHHHHHHhc---CCCccEEEEEcCCCCcHHHHHHHHHHHhc--cCCCCCeEEEEEcCCCcCHHHHHHHHH
Q 005747 129 YEAFESRMSILNEITDALK---NGDVNTLGIYGIGGIGKTTLAKEVARRAE--NDKLFDQVVFSEVSESQDIRKIQREIA 203 (679)
Q Consensus 129 ~~~~~gr~~~~~~l~~~L~---~~~~~vi~I~G~gGiGKTtLa~~v~~~~~--~~~~F~~~~wv~v~~~~~~~~l~~~i~ 203 (679)
...++||+.++++|+++|. +.+.++|+|+||||+||||||+++|++.. .+.+|++++||++++.++...+...+.
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~ 98 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTD 98 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHH
T ss_pred CCceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHH
Confidence 3456799999999999985 45678999999999999999999999855 567899999999999998877776664
Q ss_pred HHh---CCCCCc-------cchhHHHHHHHHHHHcCCceEEEEecCCCccchhhcCCCCCCCCCCcEEEEeecCcchhcc
Q 005747 204 DKL---GLKFDE-------ESESGRARRLHDRLKKEKRILVILDNIWGNLDLKAAGIPHGDDHRGCKVLLTARSLDTLST 273 (679)
Q Consensus 204 ~~l---~~~~~~-------~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~~~~l~~~~~~~~~gs~iivTtR~~~v~~~ 273 (679)
..+ +..... .........+......++++|+||||||+..+|..+. ..|||||||||++.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~~~~~~~------~~~srilvTTR~~~v~~~ 172 (277)
T d2a5yb3 99 ILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQ------ELRLRCLVTTRDVEISNA 172 (277)
T ss_dssp HHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHHHHHH------HTTCEEEEEESBGGGGGG
T ss_pred HHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHhhhhhhc------ccCceEEEEeehHHHHHh
Confidence 433 322111 1111222223334445789999999999998887543 348999999999999764
Q ss_pred cCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHHHHHHHHHhhcCCChhHHHHHHHHhcCCC
Q 005747 274 KMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVAIVTVATALRDNNSLFDWKDALEQLRRPS 353 (679)
Q Consensus 274 ~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPlai~~~~~~L~~~~~~~~w~~~l~~l~~~~ 353 (679)
.....+.|++++|+.+|||+||.+.++.....+..++++++|+++|+|+|||++++|+.|+. ++.++|....+.+....
T Consensus 173 ~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~-k~~~~~~~~~~~L~~~~ 251 (277)
T d2a5yb3 173 ASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEP-KTFEKMAQLNNKLESRG 251 (277)
T ss_dssp CCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCS-SSHHHHHHHHHHHHHHC
T ss_pred cCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHHHHHhcc-CCHHHHHHHHHHHhcCc
Confidence 44455789999999999999999999876666677899999999999999999999999987 78899999888875432
Q ss_pred CCCcCCchhhHHHHHHhhhcCCChhHHHHHHHHh
Q 005747 354 STNLMNVQPTAYKAIKLSYDKLAGEELKNIFLLI 387 (679)
Q Consensus 354 ~~~~~~~~~~~~~~l~~sy~~L~~~~lk~cfl~~ 387 (679)
...+.+++.+||+.||++ +|.||.++
T Consensus 252 -------~~~v~~il~~sY~~L~~~-lk~c~~~l 277 (277)
T d2a5yb3 252 -------LVGVECITPYSYKSLAMA-LQRCVEVL 277 (277)
T ss_dssp -------SSTTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred -------HHHHHHHHHHHHhcccHH-HHHHHHhC
Confidence 244688899999999998 99999763
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.81 E-value=2.3e-20 Score=188.72 Aligned_cols=224 Identities=18% Similarity=0.159 Sum_probs=163.9
Q ss_pred CceEEEEeecccCC---CCCccccCCCCCCEEEcCC-CCCCC--chhhcCCCCCcEEEccccccccc-chhhhcCcCCCE
Q 005747 440 EQVRVINVSYMNLL---SLPSSLGLLSNLQTLSLYN-CKLLD--ITVIRDLKKLEVLCLRGSDIKRL-PVEVGELTLLRL 512 (679)
Q Consensus 440 ~~L~~L~l~~n~l~---~lp~~~~~l~~L~~L~L~~-n~l~~--~~~~~~l~~L~~L~L~~n~i~~l-p~~i~~l~~L~~ 512 (679)
.+++.|+|++|.+. .+|+.++++++|++|+|++ |.+++ |+.|+++++|++|+|++|++..+ |..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 36999999999987 5899999999999999987 77774 67899999999999999999965 556889999999
Q ss_pred EeccCCcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCC-cEEEEEeecCCCC-CCcccccccce
Q 005747 513 LDLRDCRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHL-ISLELQIQDVNTL-PRGLFLEKLER 590 (679)
Q Consensus 513 L~l~~n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L-~~L~l~~n~l~~l-p~~~~l~~L~~ 590 (679)
+++++|.....+|.. ++++++|+++++++|.+ .+.+|..+..+.++ +.+++++|+++.. |..+....+..
T Consensus 130 l~l~~N~~~~~~p~~-l~~l~~L~~l~l~~n~l-------~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~ 201 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPS-ISSLPNLVGITFDGNRI-------SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF 201 (313)
T ss_dssp EECCSSEEESCCCGG-GGGCTTCCEEECCSSCC-------EEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSE
T ss_pred cccccccccccCchh-hccCcccceeecccccc-------cccccccccccccccccccccccccccccccccccccccc
Confidence 999999988888887 89999999999999998 67788888888776 8888888888743 33322222334
Q ss_pred eEEEEcCcccc----ccccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEe
Q 005747 591 YKILIGGVWGW----EYADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIR 666 (679)
Q Consensus 591 L~l~~~~~~~~----~~~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~ 666 (679)
+++..+..... ......+..+.+..+.....++. ...+++|+.|+|++|++ ...+|..+ ..+++|++|+|+
T Consensus 202 l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~-~~~~~~L~~L~Ls~N~l--~g~iP~~l--~~L~~L~~L~Ls 276 (313)
T d1ogqa_ 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRI--YGTLPQGL--TQLKFLHSLNVS 276 (313)
T ss_dssp EECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCC--EECCCGGG--GGCTTCCEEECC
T ss_pred cccccccccccccccccccccccccccccccccccccc-cccccccccccCccCee--cccCChHH--hCCCCCCEEECc
Confidence 44433332221 22233455555555444333332 23356777888877762 22466655 667778888888
Q ss_pred cCcCc-cCCCC
Q 005747 667 GSHLT-LNPAE 676 (679)
Q Consensus 667 ~n~l~-~lp~~ 676 (679)
+|+|+ .+|+.
T Consensus 277 ~N~l~g~iP~~ 287 (313)
T d1ogqa_ 277 FNNLCGEIPQG 287 (313)
T ss_dssp SSEEEEECCCS
T ss_pred CCcccccCCCc
Confidence 88776 56653
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.6e-20 Score=181.02 Aligned_cols=194 Identities=24% Similarity=0.320 Sum_probs=157.1
Q ss_pred ceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCc--hhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCC
Q 005747 441 QVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDI--TVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDC 518 (679)
Q Consensus 441 ~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n 518 (679)
.+..++.++++++++|+.+. ++|++|+|++|.++.+ ..|.++++|++|+|++|+|+.+|. ++.+++|++|+|++|
T Consensus 11 ~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N 87 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHN 87 (266)
T ss_dssp TCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSS
T ss_pred CCeEEEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-ccccccccccccccc
Confidence 45556889999999998764 6899999999999883 568999999999999999998884 678999999999998
Q ss_pred cCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcc--cccccceeEEEEc
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGL--FLEKLERYKILIG 596 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~--~l~~L~~L~l~~~ 596 (679)
+ +...+.. +.++++|+.|++++|.+ ....+..+..+.+++.|++++|.++.+|... .+++|+.+++++|
T Consensus 88 ~-l~~~~~~-~~~l~~L~~L~l~~~~~-------~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N 158 (266)
T d1p9ag_ 88 Q-LQSLPLL-GQTLPALTVLDVSFNRL-------TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (266)
T ss_dssp C-CSSCCCC-TTTCTTCCEEECCSSCC-------CCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred c-ccccccc-ccccccccccccccccc-------ceeeccccccccccccccccccccceeccccccccccchhcccccc
Confidence 8 5555665 78999999999999988 4455677888999999999999999888776 6788888888776
Q ss_pred CccccccccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCc
Q 005747 597 GVWGWEYADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLT 671 (679)
Q Consensus 597 ~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~ 671 (679)
.+...+ ...+..+++|+.|+|++|+ +..+|..+ ..+++|+.|+|++|++.
T Consensus 159 ~l~~~~--------------------~~~~~~l~~L~~L~Ls~N~---L~~lp~~~--~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 159 NLTELP--------------------AGLLNGLENLDTLLLQENS---LYTIPKGF--FGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCSCCC--------------------TTTTTTCTTCCEEECCSSC---CCCCCTTT--TTTCCCSEEECCSCCBC
T ss_pred cccccC--------------------ccccccccccceeecccCC---CcccChhH--CCCCCCCEEEecCCCCC
Confidence 654432 2223346889999999986 55667666 56789999999999864
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.79 E-value=5.4e-19 Score=177.86 Aligned_cols=223 Identities=17% Similarity=0.286 Sum_probs=161.3
Q ss_pred CceEEEEeecccCCCCCc-cccCCCCCCEEEcCCCCCCCc--hhhcCCCCCcEEEcccccccccchhhhcCcCCCEEecc
Q 005747 440 EQVRVINVSYMNLLSLPS-SLGLLSNLQTLSLYNCKLLDI--TVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLR 516 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~ 516 (679)
+++++|++++|+++.+|+ .|.++++|++|++++|.+..+ ..|.++++|++|++++|+++.+|..+ ...|..|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCCEEECC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccch--hhhhhhhhcc
Confidence 567888888888888775 577888888888888887773 45778888888888888888777543 3567778877
Q ss_pred CCcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEc
Q 005747 517 DCRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIG 596 (679)
Q Consensus 517 ~n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~ 596 (679)
.|. +..++...+.....+..+....|.... ....+..+..+++|+.+++++|.++.+|.. .+++|+.|++.+|
T Consensus 109 ~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~-----~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~-~~~~L~~L~l~~n 181 (305)
T d1xkua_ 109 ENE-ITKVRKSVFNGLNQMIVVELGTNPLKS-----SGIENGAFQGMKKLSYIRIADTNITTIPQG-LPPSLTELHLDGN 181 (305)
T ss_dssp SSC-CCBBCHHHHTTCTTCCEEECCSSCCCG-----GGBCTTGGGGCTTCCEEECCSSCCCSCCSS-CCTTCSEEECTTS
T ss_pred ccc-hhhhhhhhhhccccccccccccccccc-----cCCCccccccccccCccccccCCccccCcc-cCCccCEEECCCC
Confidence 776 455666556667777777777665422 234456788889999999999999888766 4678888888776
Q ss_pred Ccccccc----ccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCcc
Q 005747 597 GVWGWEY----ADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTL 672 (679)
Q Consensus 597 ~~~~~~~----~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~ 672 (679)
....... ....++.+.++.+.....++..+..+++|++|+|++|+ +..+|..+ ..+++|++|+|++|+|+.
T Consensus 182 ~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~---L~~lp~~l--~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 182 KITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK---LVKVPGGL--ADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp CCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC---CSSCCTTT--TTCSSCCEEECCSSCCCC
T ss_pred cCCCCChhHhhccccccccccccccccccccccccccccceeeeccccc---cccccccc--ccccCCCEEECCCCccCc
Confidence 6544322 22356677777776666666666667888999998886 45566555 678888999998888888
Q ss_pred CCCC
Q 005747 673 NPAE 676 (679)
Q Consensus 673 lp~~ 676 (679)
++..
T Consensus 257 i~~~ 260 (305)
T d1xkua_ 257 IGSN 260 (305)
T ss_dssp CCTT
T ss_pred cChh
Confidence 7653
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-18 Score=173.38 Aligned_cols=216 Identities=17% Similarity=0.176 Sum_probs=151.1
Q ss_pred EEEeecccCCCCCccccCCCCCCEEEcCCCCCCCc--hhhcCCCCCcEEEcccccccccch-hhhcCcCCCEEeccCCcC
Q 005747 444 VINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDI--TVIRDLKKLEVLCLRGSDIKRLPV-EVGELTLLRLLDLRDCRE 520 (679)
Q Consensus 444 ~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~L~~n~i~~lp~-~i~~l~~L~~L~l~~n~~ 520 (679)
.++.++++++++|..+. +++++|+|++|.++.+ ..|.++++|++|++++|.+..++. .+..+..+..+....+..
T Consensus 15 ~v~c~~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EEECCSSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEEcCCCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 34566777777776553 5678888888887773 347778888888888887776654 345677777777765555
Q ss_pred ccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcc--cccccceeEEEEcCc
Q 005747 521 LEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGL--FLEKLERYKILIGGV 598 (679)
Q Consensus 521 ~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~--~l~~L~~L~l~~~~~ 598 (679)
+..+++..|+++++|++|++++|.+ ....+..+..+++|+.+++++|.++.+|... .+++|+.|++++|.+
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~-------~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l 165 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGL-------QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCC-------CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cccccchhhcccccCCEEecCCccc-------ccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcc
Confidence 6667666677788888888888776 3344556667777888888888887776554 567777887777776
Q ss_pred ccccc----ccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCcc
Q 005747 599 WGWEY----ADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTL 672 (679)
Q Consensus 599 ~~~~~----~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~ 672 (679)
..++. ....+..+.+..|......+..+..+++|+.|++++|++ ..+++.. +..+++|++|+|++|++.-
T Consensus 166 ~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i---~~~~~~~-~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL---SALPTEA-LAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC---SCCCHHH-HTTCTTCCEEECCSSCEEC
T ss_pred cccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccc---ccccccc-cccccccCEEEecCCCCCC
Confidence 55432 233566677766666665555566678999999999873 3444433 3678999999999998763
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.8e-18 Score=170.02 Aligned_cols=155 Identities=25% Similarity=0.328 Sum_probs=137.5
Q ss_pred CceEEEEeecccCCCCCc-cccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCC
Q 005747 440 EQVRVINVSYMNLLSLPS-SLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDC 518 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n 518 (679)
+++++|+|++|.++.+|. .|.++++|++|+|++|.++.++.++.+++|++|+|++|+++..|..+..+++|+.|++++|
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~ 110 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFN 110 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSS
T ss_pred cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 589999999999999875 6899999999999999999988889999999999999999999989999999999999998
Q ss_pred cCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcc--cccccceeEEEEc
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGL--FLEKLERYKILIG 596 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~--~l~~L~~L~l~~~ 596 (679)
. ...++...+..+.+|++|++++|.+ ....+..+..+++|+.|++++|+++.++... .+++|+.|++++|
T Consensus 111 ~-~~~~~~~~~~~l~~l~~L~l~~n~l-------~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 182 (266)
T d1p9ag_ 111 R-LTSLPLGALRGLGELQELYLKGNEL-------KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (266)
T ss_dssp C-CCCCCSSTTTTCTTCCEEECTTSCC-------CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred c-cceeecccccccccccccccccccc-------ceeccccccccccchhcccccccccccCccccccccccceeecccC
Confidence 8 5556666688999999999999998 4455677888999999999999999888764 7899999999988
Q ss_pred Cccccc
Q 005747 597 GVWGWE 602 (679)
Q Consensus 597 ~~~~~~ 602 (679)
.+..++
T Consensus 183 ~L~~lp 188 (266)
T d1p9ag_ 183 SLYTIP 188 (266)
T ss_dssp CCCCCC
T ss_pred CCcccC
Confidence 877654
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.74 E-value=9.8e-19 Score=176.62 Aligned_cols=219 Identities=12% Similarity=0.098 Sum_probs=174.7
Q ss_pred CceEEEEeec-ccCC-CCCccccCCCCCCEEEcCCCCCCC--chhhcCCCCCcEEEccccccc-ccchhhhcCcCCCEEe
Q 005747 440 EQVRVINVSY-MNLL-SLPSSLGLLSNLQTLSLYNCKLLD--ITVIRDLKKLEVLCLRGSDIK-RLPVEVGELTLLRLLD 514 (679)
Q Consensus 440 ~~L~~L~l~~-n~l~-~lp~~~~~l~~L~~L~L~~n~l~~--~~~~~~l~~L~~L~L~~n~i~-~lp~~i~~l~~L~~L~ 514 (679)
++|++|++++ |++. .+|+.|+++++|++|+|++|.+.. +..+..+.+|+++++++|.+. .+|..+..+++|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 7899999997 7777 799999999999999999999987 466889999999999999877 7799999999999999
Q ss_pred ccCCcCccccChhhhcCCccc-ceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCC-CCCCcc-ccccccee
Q 005747 515 LRDCRELEIIPPNVLSKLSHL-EELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVN-TLPRGL-FLEKLERY 591 (679)
Q Consensus 515 l~~n~~~~~lp~~~~~~l~~L-~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~-~lp~~~-~l~~L~~L 591 (679)
+++|.+.+.+|.. +..+.++ +.+++++|.+ .+..|..+.++..+ .++++.+... .+|... .+++|+.+
T Consensus 156 l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l-------~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l 226 (313)
T d1ogqa_ 156 FDGNRISGAIPDS-YGSFSKLFTSMTISRNRL-------TGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKI 226 (313)
T ss_dssp CCSSCCEEECCGG-GGCCCTTCCEEECCSSEE-------EEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEE
T ss_pred ccccccccccccc-cccccccccccccccccc-------cccccccccccccc-cccccccccccccccccccccccccc
Confidence 9999988899988 6777765 8899999988 66677777776555 6888777665 455555 77888888
Q ss_pred EEEEcCcccccc---ccccccEEEEecCccc-cchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEec
Q 005747 592 KILIGGVWGWEY---ADIWCREFKIDLDSKI-RLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRG 667 (679)
Q Consensus 592 ~l~~~~~~~~~~---~~~~l~~l~l~~~~~~-~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~ 667 (679)
++..+....... ....++.|+++.|... ..|.. +..+++|+.|+|++|++. ..+| .+ ..+++|+.+++++
T Consensus 227 ~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~-l~~L~~L~~L~Ls~N~l~--g~iP-~~--~~L~~L~~l~l~~ 300 (313)
T d1ogqa_ 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQG-LTQLKFLHSLNVSFNNLC--GEIP-QG--GNLQRFDVSAYAN 300 (313)
T ss_dssp ECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGG-GGGCTTCCEEECCSSEEE--EECC-CS--TTGGGSCGGGTCS
T ss_pred ccccccccccccccccccccccccCccCeecccCChH-HhCCCCCCEEECcCCccc--ccCC-Cc--ccCCCCCHHHhCC
Confidence 887777654322 2346788888887776 34444 455799999999999833 2454 33 6789999999999
Q ss_pred Cc-CccC
Q 005747 668 SH-LTLN 673 (679)
Q Consensus 668 n~-l~~l 673 (679)
|+ +...
T Consensus 301 N~~l~g~ 307 (313)
T d1ogqa_ 301 NKCLCGS 307 (313)
T ss_dssp SSEEEST
T ss_pred CccccCC
Confidence 98 4443
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73 E-value=2e-17 Score=171.88 Aligned_cols=215 Identities=19% Similarity=0.224 Sum_probs=130.9
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccc------------------
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLP------------------ 501 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp------------------ 501 (679)
++|++|++++|+++.+|+ ++++++|++|++++|.+.+++.++++++|+.|++++|.++.++
T Consensus 66 ~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 144 (384)
T d2omza2 66 NNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI 144 (384)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEE
T ss_pred CCCCEEeCcCCcCCCCcc-ccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 466677777776666653 6666777777777776666555666666666666655443211
Q ss_pred ----------------------------------------------hhhhcCcCCCEEeccCCcCccccChhhhcCCccc
Q 005747 502 ----------------------------------------------VEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHL 535 (679)
Q Consensus 502 ----------------------------------------------~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L 535 (679)
.....++++..|++++|.+.+ +++ +..+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~-~~~--~~~~~~L 221 (384)
T d2omza2 145 SDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD-ITP--LGILTNL 221 (384)
T ss_dssp CCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCC-CGG--GGGCTTC
T ss_pred cccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCC-CCc--ccccCCC
Confidence 122334555555555555322 222 3456778
Q ss_pred ceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCcccc--------------
Q 005747 536 EELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVWGW-------------- 601 (679)
Q Consensus 536 ~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~~~-------------- 601 (679)
+.|++++|.+... ..+..+++|+.|++++|.++.++....+++|+.|+++.+.....
T Consensus 222 ~~L~l~~n~l~~~---------~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~ 292 (384)
T d2omza2 222 DELSLNGNQLKDI---------GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLEL 292 (384)
T ss_dssp CEEECCSSCCCCC---------GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEEC
T ss_pred CEEECCCCCCCCc---------chhhcccccchhccccCccCCCCcccccccCCEeeccCcccCCCCccccccccccccc
Confidence 8888888776332 24555666666666666666555433555666666554443322
Q ss_pred --------c--cccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCc
Q 005747 602 --------E--YADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLT 671 (679)
Q Consensus 602 --------~--~~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~ 671 (679)
. .....+..+.++.+.....++ ...+++|+.|++++|++. .++ .+ ..+++|++|++++|+++
T Consensus 293 ~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~---~l~-~l--~~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 293 NENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVS---DVS-SL--ANLTNINWLSAGHNQIS 364 (384)
T ss_dssp CSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC---CCG-GG--GGCTTCCEEECCSSCCC
T ss_pred cccccccccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCC---CCh-hH--cCCCCCCEEECCCCcCC
Confidence 1 122356677776665544432 455789999999998744 333 34 67899999999999998
Q ss_pred cCCC
Q 005747 672 LNPA 675 (679)
Q Consensus 672 ~lp~ 675 (679)
.+|+
T Consensus 365 ~l~~ 368 (384)
T d2omza2 365 DLTP 368 (384)
T ss_dssp BCGG
T ss_pred CChh
Confidence 8763
No 9
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=2.5e-17 Score=171.23 Aligned_cols=218 Identities=20% Similarity=0.237 Sum_probs=165.4
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCc
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~ 519 (679)
.+|+.|++++++++.++ .+..+++|++|+|++|.+++++.++++++|++|++++|.++.+++ ++.+++|+.|++++|.
T Consensus 44 ~~l~~L~l~~~~I~~l~-gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~~~~ 121 (384)
T d2omza2 44 DQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 121 (384)
T ss_dssp TTCCEEECCSSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCCEEECCCCCCCCcc-ccccCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc-cccccccccccccccc
Confidence 58999999999999884 789999999999999999998889999999999999999998874 8999999999998876
Q ss_pred CccccC--------------------------------------------------------------hhhhcCCcccce
Q 005747 520 ELEIIP--------------------------------------------------------------PNVLSKLSHLEE 537 (679)
Q Consensus 520 ~~~~lp--------------------------------------------------------------~~~~~~l~~L~~ 537 (679)
..+..+ ...+..+++++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (384)
T d2omza2 122 ITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLES 201 (384)
T ss_dssp CCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccce
Confidence 432110 011445667777
Q ss_pred eecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCcccccc--ccccccEEEEec
Q 005747 538 LYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVWGWEY--ADIWCREFKIDL 615 (679)
Q Consensus 538 L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~--~~~~l~~l~l~~ 615 (679)
|++++|.+.. .. .+...++|+.|++++|.++.++....+++|+.|++..|.+..... ....++.+.++.
T Consensus 202 l~l~~n~i~~-------~~--~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~ 272 (384)
T d2omza2 202 LIATNNQISD-------IT--PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGA 272 (384)
T ss_dssp EECCSSCCCC-------CG--GGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCS
T ss_pred eeccCCccCC-------CC--cccccCCCCEEECCCCCCCCcchhhcccccchhccccCccCCCCcccccccCCEeeccC
Confidence 7777777632 22 256678999999999999998754488999999999888766533 234566676654
Q ss_pred CccccchH--------------------HHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCccCC
Q 005747 616 DSKIRLKD--------------------GLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTLNP 674 (679)
Q Consensus 616 ~~~~~~~~--------------------~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~lp 674 (679)
+.....++ .....+++++.|++++|++. +++ .+ ..+++|++|++++|+++.+|
T Consensus 273 ~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~---~l~-~l--~~l~~L~~L~L~~n~l~~l~ 345 (384)
T d2omza2 273 NQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS---DIS-PV--SSLTKLQRLFFANNKVSDVS 345 (384)
T ss_dssp SCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS---CCG-GG--GGCTTCCEEECCSSCCCCCG
T ss_pred cccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCC---CCc-cc--ccCCCCCEEECCCCCCCCCh
Confidence 43222111 11344678888999888743 332 23 67899999999999998876
No 10
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.5e-16 Score=152.18 Aligned_cols=186 Identities=20% Similarity=0.295 Sum_probs=152.3
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCc
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~ 519 (679)
.+|+.|++++|++++++ .+.++++|++|++++|.++++..+.++++|++|++++|.++.++ .+..+++|+.+++++|.
T Consensus 41 ~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l~~~~ 118 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTSTQ 118 (227)
T ss_dssp HTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECTTSC
T ss_pred CCcCEEECCCCCCCcch-hHhcCCCCcEeecCCceeeccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 58999999999999985 69999999999999999999888999999999999999999887 58899999999999987
Q ss_pred CccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCcc
Q 005747 520 ELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVW 599 (679)
Q Consensus 520 ~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~ 599 (679)
... ++. +...+.+..+.++++.+.. ...+.+.++|+.|++++|.+...+....+++|+.|++++|.+.
T Consensus 119 ~~~-~~~--~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~ 186 (227)
T d1h6ua2 119 ITD-VTP--LAGLSNLQVLYLDLNQITN---------ISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKIS 186 (227)
T ss_dssp CCC-CGG--GTTCTTCCEEECCSSCCCC---------CGGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred ccc-cch--hccccchhhhhchhhhhch---------hhhhccccccccccccccccccchhhcccccceecccCCCccC
Confidence 443 332 6788999999999987732 2346788999999999999987765448889999998777654
Q ss_pred ccccccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEec
Q 005747 600 GWEYADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRG 667 (679)
Q Consensus 600 ~~~~~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~ 667 (679)
.++. +..+++|+.|+|++|+ +.+++ .+ ..+++|+.|+|++
T Consensus 187 ~l~~----------------------l~~l~~L~~L~Ls~N~---lt~i~-~l--~~l~~L~~L~lsn 226 (227)
T d1h6ua2 187 DISP----------------------LASLPNLIEVHLKNNQ---ISDVS-PL--ANTSNLFIVTLTN 226 (227)
T ss_dssp CCGG----------------------GGGCTTCCEEECTTSC---CCBCG-GG--TTCTTCCEEEEEE
T ss_pred CChh----------------------hcCCCCCCEEECcCCc---CCCCc-cc--ccCCCCCEEEeeC
Confidence 3221 2346899999999987 44443 24 7889999999985
No 11
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1e-16 Score=151.07 Aligned_cols=147 Identities=25% Similarity=0.320 Sum_probs=126.3
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCc
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~ 519 (679)
.+|+.|++++|.++.++ .+..+++|++|++++|.+++++.++.+++|++|++++|+++.+| .+..+++|+.|++++|.
T Consensus 46 ~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~~~ 123 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEHNG 123 (210)
T ss_dssp HTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTTSC
T ss_pred cCccEEECcCCCCCCch-hHhhCCCCCEEeCCCccccCccccccCccccccccccccccccc-ccccccccccccccccc
Confidence 47899999999999886 58899999999999999999888899999999999999999988 58899999999999987
Q ss_pred CccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCcc
Q 005747 520 ELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVW 599 (679)
Q Consensus 520 ~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~ 599 (679)
...++. +..+++|+.+++++|.+.. +..+..+++|+.+++++|+++.++....+++|+.|++++|.+.
T Consensus 124 -~~~~~~--l~~l~~l~~l~~~~n~l~~---------~~~~~~l~~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 124 -ISDING--LVHLPQLESLYLGNNKITD---------ITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp -CCCCGG--GGGCTTCCEEECCSSCCCC---------CGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred -cccccc--ccccccccccccccccccc---------cccccccccccccccccccccccccccCCCCCCEEECCCCCCC
Confidence 444543 7889999999999998832 3356788999999999999998876448899999999877654
Q ss_pred c
Q 005747 600 G 600 (679)
Q Consensus 600 ~ 600 (679)
.
T Consensus 192 ~ 192 (210)
T d1h6ta2 192 D 192 (210)
T ss_dssp B
T ss_pred C
Confidence 4
No 12
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.68 E-value=1.5e-16 Score=159.59 Aligned_cols=220 Identities=21% Similarity=0.267 Sum_probs=173.3
Q ss_pred ceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCc--hhhcCCCCCcEEEccccccccc-chhhhcCcCCCEEeccC
Q 005747 441 QVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDI--TVIRDLKKLEVLCLRGSDIKRL-PVEVGELTLLRLLDLRD 517 (679)
Q Consensus 441 ~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~L~~n~i~~l-p~~i~~l~~L~~L~l~~ 517 (679)
..+.++-++++++++|+.+. +++++|+|++|+++.+ ..|.++++|++|++++|.++.+ |..+..+++|++|++++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCEEEecCCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 34678888889999998774 7899999999999995 3689999999999999999988 55789999999999999
Q ss_pred CcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCC---CCcc-cccccceeEE
Q 005747 518 CRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTL---PRGL-FLEKLERYKI 593 (679)
Q Consensus 518 n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~l---p~~~-~l~~L~~L~l 593 (679)
|+ +..+|.. ....|..|++.+|.+. ...+..+.....+..++...|..... +..+ .+++|+.+.+
T Consensus 89 n~-l~~l~~~---~~~~l~~L~~~~n~l~-------~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l 157 (305)
T d1xkua_ 89 NQ-LKELPEK---MPKTLQELRVHENEIT-------KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI 157 (305)
T ss_dssp SC-CSBCCSS---CCTTCCEEECCSSCCC-------BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC
T ss_pred Cc-cCcCccc---hhhhhhhhhccccchh-------hhhhhhhhccccccccccccccccccCCCccccccccccCcccc
Confidence 98 6778865 3568999999999883 33444566677788888887765532 2233 6788899999
Q ss_pred EEcCcccccc-ccccccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCcc
Q 005747 594 LIGGVWGWEY-ADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTL 672 (679)
Q Consensus 594 ~~~~~~~~~~-~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~ 672 (679)
..|....++. ....++.+.+..+.........+..++.++.|++++|. +..++... +..+++|++|+|++|.|+.
T Consensus 158 ~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~---l~~~~~~~-~~~l~~L~~L~L~~N~L~~ 233 (305)
T d1xkua_ 158 ADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS---ISAVDNGS-LANTPHLRELHLNNNKLVK 233 (305)
T ss_dssp CSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSC---CCEECTTT-GGGSTTCCEEECCSSCCSS
T ss_pred ccCCccccCcccCCccCEEECCCCcCCCCChhHhhcccccccccccccc---cccccccc-ccccccceeeecccccccc
Confidence 8888776643 34578888888777666666666667899999999987 44443332 4778999999999999999
Q ss_pred CCCCC
Q 005747 673 NPAES 677 (679)
Q Consensus 673 lp~~~ 677 (679)
+|+++
T Consensus 234 lp~~l 238 (305)
T d1xkua_ 234 VPGGL 238 (305)
T ss_dssp CCTTT
T ss_pred ccccc
Confidence 98765
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=1.8e-16 Score=149.45 Aligned_cols=167 Identities=19% Similarity=0.224 Sum_probs=137.5
Q ss_pred cCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChhhhcCCcccceee
Q 005747 460 GLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELY 539 (679)
Q Consensus 460 ~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~ 539 (679)
..+.+|+.|++++|.++.+..+..+++|++|++++|.|+.++. ++.+++|++|++++|. +..+|. +..+++|+.|+
T Consensus 43 ~~L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~-i~~l~~--l~~l~~L~~L~ 118 (210)
T d1h6ta2 43 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK-VKDLSS--LKDLKKLKSLS 118 (210)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCGGG--GTTCTTCCEEE
T ss_pred HHhcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc-cccCcccccccccccc-cccccc--ccccccccccc
Confidence 3567899999999999998889999999999999999999884 7899999999999988 566764 78999999999
Q ss_pred cCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCccccccccccccEEEEecCccc
Q 005747 540 MGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVWGWEYADIWCREFKIDLDSKI 619 (679)
Q Consensus 540 l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~l~~~~~~ 619 (679)
+++|.+.. ...+..+++|+.+++++|.++..+....+++|+.+.+++|.+..+..
T Consensus 119 l~~~~~~~---------~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~~---------------- 173 (210)
T d1h6ta2 119 LEHNGISD---------INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP---------------- 173 (210)
T ss_dssp CTTSCCCC---------CGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG----------------
T ss_pred cccccccc---------ccccccccccccccccccccccccccccccccccccccccccccccc----------------
Confidence 99998732 23578899999999999999887655588899998887766543221
Q ss_pred cchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEec
Q 005747 620 RLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRG 667 (679)
Q Consensus 620 ~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~ 667 (679)
...+++|+.|+|++|++ .+++ .+ ..+++|++|+|++
T Consensus 174 ------l~~l~~L~~L~Ls~N~i---~~l~-~l--~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 174 ------LAGLTKLQNLYLSKNHI---SDLR-AL--AGLKNLDVLELFS 209 (210)
T ss_dssp ------GTTCTTCCEEECCSSCC---CBCG-GG--TTCTTCSEEEEEE
T ss_pred ------ccCCCCCCEEECCCCCC---CCCh-hh--cCCCCCCEEEccC
Confidence 22468999999999874 4443 34 7889999999985
No 14
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=1.4e-16 Score=148.81 Aligned_cols=126 Identities=25% Similarity=0.373 Sum_probs=62.5
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCc
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~ 519 (679)
.+++.|++++|.++.++ .+..+++|++|++++|.+++++.++++++|++|++++|.+..+|. +..+++|+.|++++|.
T Consensus 40 ~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l~~~~ 117 (199)
T d2omxa2 40 DQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQ 117 (199)
T ss_dssp TTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEECCSSC
T ss_pred cCCCEEECCCCCCCCcc-ccccCCCcCcCccccccccCcccccCCcccccccccccccccccc-cccccccccccccccc
Confidence 34555555555555543 345555555555555555554445555555555555555555442 4555555555555544
Q ss_pred CccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCC
Q 005747 520 ELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTL 579 (679)
Q Consensus 520 ~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~l 579 (679)
... ++ . +..+++|+.|++++|.+.. ...+..+++|+.|++++|.++.+
T Consensus 118 ~~~-~~-~-~~~l~~L~~L~l~~n~l~~---------~~~l~~~~~L~~L~l~~n~l~~l 165 (199)
T d2omxa2 118 ITD-ID-P-LKNLTNLNRLELSSNTISD---------ISALSGLTSLQQLNFSSNQVTDL 165 (199)
T ss_dssp CCC-CG-G-GTTCTTCSEEECCSSCCCC---------CGGGTTCTTCSEEECCSSCCCCC
T ss_pred ccc-cc-c-cchhhhhHHhhhhhhhhcc---------cccccccccccccccccccccCC
Confidence 222 21 1 4455555555555554421 11244455555555555554443
No 15
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.3e-16 Score=156.47 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=161.0
Q ss_pred CceEEEEeecccCCCCCc-cccCCCCCCEEEcCCCCCCC--chhhcCCCCCcEEEcc-ccccccc-chhhhcCcCCCEEe
Q 005747 440 EQVRVINVSYMNLLSLPS-SLGLLSNLQTLSLYNCKLLD--ITVIRDLKKLEVLCLR-GSDIKRL-PVEVGELTLLRLLD 514 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~L~~n~l~~--~~~~~~l~~L~~L~L~-~n~i~~l-p~~i~~l~~L~~L~ 514 (679)
.++++|+|++|.++.+|+ .|.++++|++|++++|.+.. ...+..+..++.+... .+.++.+ |..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 578999999999999886 58999999999999999987 3556778889998875 4567777 45688999999999
Q ss_pred ccCCcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcc--cccccceeE
Q 005747 515 LRDCRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGL--FLEKLERYK 592 (679)
Q Consensus 515 l~~n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~--~l~~L~~L~ 592 (679)
+++|. ...++...+..+.+|+.+++++|.+ ....+..|..+++|+.|++++|+++.++... .+++|+.+.
T Consensus 112 l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l-------~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 112 LDRCG-LQELGPGLFRGLAALQYLYLQDNAL-------QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp CTTSC-CCCCCTTTTTTCTTCCEEECCSSCC-------CCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCcc-cccccccccchhcccchhhhccccc-------cccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 99988 4555655588899999999999998 4455677888999999999999999887655 789999999
Q ss_pred EEEcCcccccc----ccccccEEEEecCccccchHHHHHHhcccceeeccccc
Q 005747 593 ILIGGVWGWEY----ADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLE 641 (679)
Q Consensus 593 l~~~~~~~~~~----~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 641 (679)
+.+|.+..... ....+..++++.|.....++..+..+++|+.|++++|.
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 98888766532 23477888998888888888888788999999999987
No 16
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=4.2e-16 Score=145.56 Aligned_cols=126 Identities=19% Similarity=0.226 Sum_probs=57.4
Q ss_pred CCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChhhhcCCcccceeecC
Q 005747 462 LSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELYMG 541 (679)
Q Consensus 462 l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~l~ 541 (679)
+.+|++|++++|.++.++.++.+++|++|++++|.++.++. ++.+++|++|++++|. ...++. ++++++|+.|+++
T Consensus 39 l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~-~~~~~~--l~~l~~L~~L~l~ 114 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ-IADITP--LANLTNLTGLTLF 114 (199)
T ss_dssp HTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCCGG--GTTCTTCSEEECC
T ss_pred hcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc-ccCCcccccccccccc-cccccc--ccccccccccccc
Confidence 34445555555554444444445555555555555544442 4445555555555444 222332 4444555555554
Q ss_pred CCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCccc
Q 005747 542 PRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVWG 600 (679)
Q Consensus 542 ~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~~ 600 (679)
+|.... ...+..+++|+.|++++|++..++....+++|+.|++.+|.+..
T Consensus 115 ~~~~~~---------~~~~~~l~~L~~L~l~~n~l~~~~~l~~~~~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 115 NNQITD---------IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTD 164 (199)
T ss_dssp SSCCCC---------CGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCC
T ss_pred cccccc---------ccccchhhhhHHhhhhhhhhcccccccccccccccccccccccC
Confidence 444311 11234444555555555544444332244445555544444433
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=7.1e-16 Score=147.41 Aligned_cols=186 Identities=18% Similarity=0.192 Sum_probs=142.3
Q ss_pred ecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChh
Q 005747 448 SYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPN 527 (679)
Q Consensus 448 ~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~ 527 (679)
+.+.++.+. .+..+.+|+.|++.+|.++.++.+..+++|++|++++|.++.+++ +..+++|++|++++|. .+.++.
T Consensus 27 ~~~~~~d~~-~~~~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~-~~~i~~- 102 (227)
T d1h6ua2 27 GKSNVTDTV-TQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNP-LKNVSA- 102 (227)
T ss_dssp TCSSTTSEE-CHHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCC-CSCCGG-
T ss_pred CCCCcCCcC-CHHHcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc-cccccccccccccccc-cccccc-
Confidence 344454432 356778899999999999988889999999999999999988764 8899999999999987 455553
Q ss_pred hhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcccccccceeEEEEcCcccccccccc
Q 005747 528 VLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGLFLEKLERYKILIGGVWGWEYADIW 607 (679)
Q Consensus 528 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~~~~ 607 (679)
+..+++|+.+++++|.... ...+...+.+..+.++++.+...+.....++|+.|.+..|....+.
T Consensus 103 -l~~l~~L~~l~l~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~----- 167 (227)
T d1h6ua2 103 -IAGLQSIKTLDLTSTQITD---------VTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT----- 167 (227)
T ss_dssp -GTTCTTCCEEECTTSCCCC---------CGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-----
T ss_pred -ccccccccccccccccccc---------cchhccccchhhhhchhhhhchhhhhccccccccccccccccccch-----
Confidence 7889999999999887632 2345667888999998888876655447788888888665443221
Q ss_pred ccEEEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCccCCC
Q 005747 608 CREFKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTLNPA 675 (679)
Q Consensus 608 l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~lp~ 675 (679)
. +..+++|+.|+|++|++ .+++ .+ ..+++|++|+|++|+++.+|.
T Consensus 168 ----------------~-l~~l~~L~~L~Ls~n~l---~~l~-~l--~~l~~L~~L~Ls~N~lt~i~~ 212 (227)
T d1h6ua2 168 ----------------P-LANLSKLTTLKADDNKI---SDIS-PL--ASLPNLIEVHLKNNQISDVSP 212 (227)
T ss_dssp ----------------G-GTTCTTCCEEECCSSCC---CCCG-GG--GGCTTCCEEECTTSCCCBCGG
T ss_pred ----------------h-hcccccceecccCCCcc---CCCh-hh--cCCCCCCEEECcCCcCCCCcc
Confidence 1 22468999999999874 4443 34 778999999999999998873
No 18
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.59 E-value=2.1e-15 Score=128.38 Aligned_cols=103 Identities=22% Similarity=0.275 Sum_probs=51.0
Q ss_pred CEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChhhhcCCcccceeecCCCCC
Q 005747 466 QTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELYMGPRSF 545 (679)
Q Consensus 466 ~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~l~~n~~ 545 (679)
|+|+|++|.++.++.++.+++|++|++++|.|+.+|+.++.+++|+.|++++|. ++.+|. ++.+++|++|++++|.+
T Consensus 1 R~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~--~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVDG--VANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSCCSSCCCGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCGG--GTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCCCCCcccccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccCc--cccccccCeEECCCCcc
Confidence 345555555555444555555555555555555555555555555555555544 333332 45555555555555555
Q ss_pred CcchhhhcccccccccccCCCcEEEEEeecCC
Q 005747 546 DKWEVEVEGVKNASLHELKHLISLELQIQDVN 577 (679)
Q Consensus 546 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~ 577 (679)
..++ ....+..+++|+.|++++|+++
T Consensus 78 ~~~~------~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 78 QQSA------AIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CSSS------TTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCC------CchhhcCCCCCCEEECCCCcCC
Confidence 3221 1123445555555555555554
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4.8e-15 Score=143.06 Aligned_cols=219 Identities=16% Similarity=0.153 Sum_probs=148.7
Q ss_pred EEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCc--hhhcCCCCCcEEEcccccccc-cch-hhhcCcCCCEEeccCC
Q 005747 443 RVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDI--TVIRDLKKLEVLCLRGSDIKR-LPV-EVGELTLLRLLDLRDC 518 (679)
Q Consensus 443 ~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~L~~n~i~~-lp~-~i~~l~~L~~L~l~~n 518 (679)
++++.++++++++|+.+. +++++|+|++|.++.+ ..|.++++|++|++++|.+.. +|. .+..+++++.|.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 578888889999997664 5899999999999874 358899999999999998874 433 5778999999998765
Q ss_pred cCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCcc--cc-cccceeEEEE
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRGL--FL-EKLERYKILI 595 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~~--~l-~~L~~L~l~~ 595 (679)
+.+..++...|.++++|++|++++|.+...+ ....+..+..|..+...++.+..++... .+ ..+..|.+..
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~------~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~ 162 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLP------DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 162 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCC------CCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred ccccccccccccccccccccccchhhhcccc------cccccccccccccccccccccccccccccccccccceeeeccc
Confidence 5566777777899999999999998874321 1223445566666666677777766544 33 3677777777
Q ss_pred cCccccccccc---cccEEE-EecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCc
Q 005747 596 GGVWGWEYADI---WCREFK-IDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLT 671 (679)
Q Consensus 596 ~~~~~~~~~~~---~l~~l~-l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~ 671 (679)
|.+..+..... .+..+. ++.+.....+...+..+++|+.|++++|+ +..+|... +..+++|+.|++. .+.
T Consensus 163 n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~---l~~l~~~~-~~~l~~L~~l~~~--~l~ 236 (242)
T d1xwdc1 163 NGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR---IHSLPSYG-LENLKKLRARSTY--NLK 236 (242)
T ss_dssp SCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC---CCCCCSSS-CTTCCEEESSSEE--SSS
T ss_pred ccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCc---CCccCHHH-HcCCcccccCcCC--CCC
Confidence 66665543322 122222 23333444555566677899999998886 44444432 3455555555553 466
Q ss_pred cCCC
Q 005747 672 LNPA 675 (679)
Q Consensus 672 ~lp~ 675 (679)
.+|.
T Consensus 237 ~lp~ 240 (242)
T d1xwdc1 237 KLPT 240 (242)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 7764
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.58 E-value=2.3e-15 Score=139.52 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=105.5
Q ss_pred EEEEeecccCCCCCccccCCCCCCEEEcCCCCCCC---chhhcCCCCCcEEEcccccccccc-hhhhcCcCCCEEeccCC
Q 005747 443 RVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLD---ITVIRDLKKLEVLCLRGSDIKRLP-VEVGELTLLRLLDLRDC 518 (679)
Q Consensus 443 ~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~---~~~~~~l~~L~~L~L~~n~i~~lp-~~i~~l~~L~~L~l~~n 518 (679)
++++.++++++++|..+. +++++|+|++|.|+. ...|..+++|+.|+|++|.+..++ ..+..+++|++|+|++|
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 468889999999998764 689999999999875 356788999999999999998664 46778899999999998
Q ss_pred cCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCC
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTL 579 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~l 579 (679)
+ +..+|++.|.++++|++|+|++|.+ ....+..|..+++|++|+|++|.+...
T Consensus 89 ~-l~~l~~~~F~~l~~L~~L~L~~N~l-------~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 89 K-IKEISNKMFLGLHQLKTLNLYDNQI-------SCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp C-CCEECSSSSTTCTTCCEEECCSSCC-------CEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred c-ccccCHHHHhCCCcccccccCCccc-------cccCHHHhcCCcccccccccccccccc
Confidence 7 6677777789999999999999998 555667788889999999988877643
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.56 E-value=9.2e-15 Score=149.38 Aligned_cols=94 Identities=23% Similarity=0.322 Sum_probs=46.9
Q ss_pred ceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcC
Q 005747 441 QVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRE 520 (679)
Q Consensus 441 ~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~ 520 (679)
++++|++++++++++|+. +++|++|+|++|.++.++. .+.+|+.|++++|.++.++. + .+.|++|++++|.
T Consensus 39 ~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~l~~lp~--~~~~L~~L~l~~n~l~~l~~-l--p~~L~~L~L~~n~- 109 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPE--LPQSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQ- 109 (353)
T ss_dssp TCSEEECTTSCCSCCCSC---CTTCSEEECCSSCCSSCCC--CCTTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSC-
T ss_pred CCCEEEeCCCCCCCCCCC---CCCCCEEECCCCCCccccc--chhhhhhhhhhhcccchhhh-h--ccccccccccccc-
Confidence 455666666666666542 3456666666666655332 13345555555555554432 1 1235555555544
Q ss_pred ccccChhhhcCCcccceeecCCCCC
Q 005747 521 LEIIPPNVLSKLSHLEELYMGPRSF 545 (679)
Q Consensus 521 ~~~lp~~~~~~l~~L~~L~l~~n~~ 545 (679)
+..+|. ++.+++|++|++++|.+
T Consensus 110 l~~lp~--~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 110 LEKLPE--LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp CSSCCC--CTTCTTCCEEECCSSCC
T ss_pred cccccc--hhhhccceeeccccccc
Confidence 334443 34455555555554443
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.55 E-value=7.5e-15 Score=124.87 Aligned_cols=120 Identities=24% Similarity=0.260 Sum_probs=98.9
Q ss_pred EEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCc-hhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCc
Q 005747 443 RVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDI-TVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCREL 521 (679)
Q Consensus 443 ~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~ 521 (679)
|+|++++|+++.++ .+.++++|++|++++|.++.+ +.++.+++|++|++++|.|+.+| ++..+++|++|++++|. +
T Consensus 1 R~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~-i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR-L 77 (124)
T ss_dssp SEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-C
T ss_pred CEEEcCCCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCc-c
Confidence 58999999999987 589999999999999999994 67999999999999999999997 59999999999999998 5
Q ss_pred cccCh-hhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEE
Q 005747 522 EIIPP-NVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISL 569 (679)
Q Consensus 522 ~~lp~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L 569 (679)
..+|. ..++.+++|++|++++|.+...+ +.....+..+++|+.|
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~~~~----~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEE----GIQERLAEMLPSVSSI 122 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSS----SCTTHHHHHCTTCSEE
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCCcCc----cHHHHHHHHCcCcceE
Confidence 55553 34789999999999999985432 1222334446666655
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.6e-15 Score=133.50 Aligned_cols=114 Identities=20% Similarity=0.165 Sum_probs=55.7
Q ss_pred ccCCCCCCEEEcCCCCCCCchh-hcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChhhhcCCcccce
Q 005747 459 LGLLSNLQTLSLYNCKLLDITV-IRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEE 537 (679)
Q Consensus 459 ~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~ 537 (679)
+.++..|+.|+|++|+|+.++. +..+++|++|+|++|.|+.++ ++..+++|++|++++|. +..+|+..+..+++|++
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~-i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNR-ICRIGEGLDQALPDLTE 91 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSC-CCEECSCHHHHCTTCCE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhccccc-ccCCCcccccccccccc
Confidence 3344455555555555554322 234555555555555555553 34555555555555554 34444443444555555
Q ss_pred eecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCC
Q 005747 538 LYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLP 580 (679)
Q Consensus 538 L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp 580 (679)
|++++|.+..++. ...+..+++|++|++++|.++..|
T Consensus 92 L~L~~N~i~~~~~------l~~l~~l~~L~~L~l~~N~i~~~~ 128 (162)
T d1a9na_ 92 LILTNNSLVELGD------LDPLASLKSLTYLCILRNPVTNKK 128 (162)
T ss_dssp EECCSCCCCCGGG------GGGGGGCTTCCEEECCSSGGGGST
T ss_pred ceecccccccccc------ccccccccccchhhcCCCcccccc
Confidence 5555555532211 123445555555555555555444
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.3e-15 Score=132.97 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=106.3
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhh-hcCcCCCEEeccCC
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEV-GELTLLRLLDLRDC 518 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i-~~l~~L~~L~l~~n 518 (679)
.+++.|+|++|+++.+|..+..+++|++|+|++|.++.++.+..+++|++|++++|.++.+|..+ ..+++|++|++++|
T Consensus 18 ~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N 97 (162)
T d1a9na_ 18 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN 97 (162)
T ss_dssp TSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSC
T ss_pred CcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCccccccccccccceeccc
Confidence 57999999999999998777889999999999999999888999999999999999999998764 67999999999999
Q ss_pred cCccccCh-hhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEE
Q 005747 519 RELEIIPP-NVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLE 570 (679)
Q Consensus 519 ~~~~~lp~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~ 570 (679)
. +..++. ..+..+++|++|++++|.+...+. .-+..+..+++|+.||
T Consensus 98 ~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~----~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 98 S-LVELGDLDPLASLKSLTYLCILRNPVTNKKH----YRLYVIYKVPQVRVLD 145 (162)
T ss_dssp C-CCCGGGGGGGGGCTTCCEEECCSSGGGGSTT----HHHHHHHHCTTCSEET
T ss_pred c-ccccccccccccccccchhhcCCCccccccc----hHHHHHHHCCCcCeeC
Confidence 8 555553 347899999999999998844321 1123577888998887
No 25
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.52 E-value=5.7e-14 Score=143.38 Aligned_cols=215 Identities=20% Similarity=0.181 Sum_probs=141.2
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCc
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~ 519 (679)
++|++|++++|+++++|.. +.+|+.|++++|.++.++.+ .+.|++|++++|.++.+|. ++.+++|++|++++|.
T Consensus 58 ~~L~~L~Ls~N~l~~lp~~---~~~L~~L~l~~n~l~~l~~l--p~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~ 131 (353)
T d1jl5a_ 58 PHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDL--PPLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNS 131 (353)
T ss_dssp TTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSC--CTTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSC
T ss_pred CCCCEEECCCCCCcccccc---hhhhhhhhhhhcccchhhhh--ccccccccccccccccccc-hhhhccceeecccccc
Confidence 5899999999999999865 46899999999998876543 2469999999999999985 6889999999999876
Q ss_pred CccccChh------------------hhcCCcccceeecCCCCCCcchhhhc-----------ccccccccccCCCcEEE
Q 005747 520 ELEIIPPN------------------VLSKLSHLEELYMGPRSFDKWEVEVE-----------GVKNASLHELKHLISLE 570 (679)
Q Consensus 520 ~~~~lp~~------------------~~~~l~~L~~L~l~~n~~~~~~~~~~-----------~~~~~~l~~l~~L~~L~ 570 (679)
.. ..|.. .+..++.++.|++++|.....+.... ......+..++.|+.++
T Consensus 132 ~~-~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~ 210 (353)
T d1jl5a_ 132 LK-KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIY 210 (353)
T ss_dssp CS-CCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEE
T ss_pred cc-ccccccccccchhhccccccccccccccccceecccccccccccccccccccccccccccccccccccccccccccc
Confidence 43 22211 14556778888888876644321000 01123456678889999
Q ss_pred EEeecCCCCCCcccccccceeEEEEcCcc----------------------------------------ccccccccccE
Q 005747 571 LQIQDVNTLPRGLFLEKLERYKILIGGVW----------------------------------------GWEYADIWCRE 610 (679)
Q Consensus 571 l~~n~l~~lp~~~~l~~L~~L~l~~~~~~----------------------------------------~~~~~~~~l~~ 610 (679)
+++|....++... .++..+.+..+... ......+.++.
T Consensus 211 l~~n~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 288 (353)
T d1jl5a_ 211 ADNNLLKTLPDLP--PSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEE 288 (353)
T ss_dssp CCSSCCSSCCSCC--TTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCE
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccchhcccccccCccccccccCCCCCE
Confidence 8888776655321 12222222111111 11122245677
Q ss_pred EEEecCccccchHHHHHHhcccceeeccccccccccccccccCcCCCCCccEEEEecCcCccCCC
Q 005747 611 FKIDLDSKIRLKDGLILKLQGIEDLWLSDLEERDVNYFVNELDKVGPSQLKHLYIRGSHLTLNPA 675 (679)
Q Consensus 611 l~l~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~l~~i~~~l~~~~~~~L~~L~l~~n~l~~lp~ 675 (679)
|.++.|.....+. .+++|+.|+|++|+ +.++|. .+++|++|++++|+|+.+|.
T Consensus 289 L~Ls~N~l~~lp~----~~~~L~~L~L~~N~---L~~l~~-----~~~~L~~L~L~~N~L~~lp~ 341 (353)
T d1jl5a_ 289 LNVSNNKLIELPA----LPPRLERLIASFNH---LAEVPE-----LPQNLKQLHVEYNPLREFPD 341 (353)
T ss_dssp EECCSSCCSCCCC----CCTTCCEEECCSSC---CSCCCC-----CCTTCCEEECCSSCCSSCCC
T ss_pred EECCCCccCcccc----ccCCCCEEECCCCc---CCcccc-----ccCCCCEEECcCCcCCCCCc
Confidence 7776665554442 25778888888776 334432 24689999999999988874
No 26
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.4e-14 Score=139.75 Aligned_cols=192 Identities=10% Similarity=0.083 Sum_probs=135.7
Q ss_pred CceEEEEeecccCCCCCc-cccCCCCCCEEEcCCCCCCC---chhhcCCCCCcEEEccc-ccccccc-hhhhcCcCCCEE
Q 005747 440 EQVRVINVSYMNLLSLPS-SLGLLSNLQTLSLYNCKLLD---ITVIRDLKKLEVLCLRG-SDIKRLP-VEVGELTLLRLL 513 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~-~~~~l~~L~~L~L~~n~l~~---~~~~~~l~~L~~L~L~~-n~i~~lp-~~i~~l~~L~~L 513 (679)
.+++.|++++|.++.+|+ .|.++++|++|++++|.+.. +..|..++++++|.+.. |++..++ ..+..+++|++|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999887 58999999999999999876 34588999999999875 5777665 457899999999
Q ss_pred eccCCcCccccCh-hhhcCCcccceeecCCCCCCcchhhhcccccccccccC-CCcEEEEEeecCCCCCCcc-cccccce
Q 005747 514 DLRDCRELEIIPP-NVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELK-HLISLELQIQDVNTLPRGL-FLEKLER 590 (679)
Q Consensus 514 ~l~~n~~~~~lp~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~-~L~~L~l~~n~l~~lp~~~-~l~~L~~ 590 (679)
++++|.+ ...+. ..+..+..|..+...++.+. ...+..+.+++ .++.|++++|+++.++... ...++..
T Consensus 109 ~l~~~~l-~~~~~~~~~~~l~~l~~~~~~n~~l~-------~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~ 180 (242)
T d1xwdc1 109 LISNTGI-KHLPDVHKIHSLQKVLLDIQDNINIH-------TIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE 180 (242)
T ss_dssp EEESCCC-CSCCCCTTTCBSSCEEEEEESCTTCC-------EECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEE
T ss_pred ccchhhh-cccccccccccccccccccccccccc-------cccccccccccccceeeecccccccccccccccchhhhc
Confidence 9999874 44443 22344556666666776663 33345555554 7888999999999887765 5555555
Q ss_pred eEE-EEcCcccccc----ccccccEEEEecCccccchHHHHHHhcccceeeccc
Q 005747 591 YKI-LIGGVWGWEY----ADIWCREFKIDLDSKIRLKDGLILKLQGIEDLWLSD 639 (679)
Q Consensus 591 L~l-~~~~~~~~~~----~~~~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~L~~ 639 (679)
+.. .+|.+..++. ....++.|+++.|.....+...+..+++|+.|++.+
T Consensus 181 ~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 181 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp EECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred cccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 543 4455555532 235788888888776666655444455555555443
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.41 E-value=1.9e-15 Score=140.37 Aligned_cols=130 Identities=19% Similarity=0.248 Sum_probs=106.9
Q ss_pred ceEEEEeecc--cCCCCCccccCCCCCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCC
Q 005747 441 QVRVINVSYM--NLLSLPSSLGLLSNLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDC 518 (679)
Q Consensus 441 ~L~~L~l~~n--~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n 518 (679)
.++.++++++ .+..+|.++..+++|++|+|++|.++.++.+..+++|++|+|++|.|+.+|.....+++|++|++++|
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N 103 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN 103 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE
T ss_pred ccceeeeecccCchhhhhhHHhcccccceeECcccCCCCcccccCCccccChhhcccccccccccccccccccccccccc
Confidence 3455666654 46677888999999999999999999988899999999999999999999876677788999999998
Q ss_pred cCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEeecCCCC
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTL 579 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~l 579 (679)
. +..++. +..+++|++|++++|.+..++. ...+..+++|+.|++++|++...
T Consensus 104 ~-i~~l~~--~~~l~~L~~L~L~~N~i~~~~~------~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 104 Q-IASLSG--IEKLVNLRVLYMSNNKITNWGE------IDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp E-CCCHHH--HHHHHHSSEEEESEEECCCHHH------HHHHTTTTTCSEEEECSSHHHHH
T ss_pred c-cccccc--ccccccccccccccchhccccc------cccccCCCccceeecCCCccccC
Confidence 7 555643 7889999999999999854421 23578899999999999988643
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.41 E-value=1.4e-13 Score=127.31 Aligned_cols=108 Identities=24% Similarity=0.285 Sum_probs=79.3
Q ss_pred CCEEEcCCCCCCCc-hhhcCCCCCcEEEcccccccc-cc-hhhhcCcCCCEEeccCCcCccccChhhhcCCcccceeecC
Q 005747 465 LQTLSLYNCKLLDI-TVIRDLKKLEVLCLRGSDIKR-LP-VEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELYMG 541 (679)
Q Consensus 465 L~~L~L~~n~l~~~-~~~~~l~~L~~L~L~~n~i~~-lp-~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~l~ 541 (679)
.++++.+++.++.+ ..+ .+++++|+|++|.|+. ++ ..+..+++|+.|+|++|.+ ..++.+.+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i-~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQL-TGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSSCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCC-CCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcCccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeecccccc-ccccccccccccccceeeec
Confidence 45778888888774 333 2678888888888864 43 3567888888888888774 44455557888888888888
Q ss_pred CCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCc
Q 005747 542 PRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRG 582 (679)
Q Consensus 542 ~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~ 582 (679)
+|++ ....+..|.++++|++|+|++|+|+.+|+.
T Consensus 87 ~N~l-------~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~ 120 (192)
T d1w8aa_ 87 ENKI-------KEISNKMFLGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp SCCC-------CEECSSSSTTCTTCCEEECCSSCCCEECTT
T ss_pred cccc-------cccCHHHHhCCCcccccccCCccccccCHH
Confidence 8888 445566788888888888888888877654
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.24 E-value=1.9e-13 Score=126.60 Aligned_cols=128 Identities=22% Similarity=0.238 Sum_probs=100.2
Q ss_pred CceEEEEeecccCCCCCccccCCCCCCEEEcCCCCCCCchh-hcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCC
Q 005747 440 EQVRVINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLDITV-IRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDC 518 (679)
Q Consensus 440 ~~L~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n 518 (679)
.+|+.|++++|.++.++ .+..+++|++|+|++|.++.++. +..+++|++|++++|.++.++ .+..+++|+.|++++|
T Consensus 48 ~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~L~~N 125 (198)
T d1m9la_ 48 KACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNN 125 (198)
T ss_dssp TTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEEEESEE
T ss_pred cccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 68999999999999996 58999999999999999998644 455678999999999999886 5889999999999998
Q ss_pred cCccccCh-hhhcCCcccceeecCCCCCCcchhhhcc---cccccccccCCCcEEE
Q 005747 519 RELEIIPP-NVLSKLSHLEELYMGPRSFDKWEVEVEG---VKNASLHELKHLISLE 570 (679)
Q Consensus 519 ~~~~~lp~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~---~~~~~l~~l~~L~~L~ 570 (679)
. +..++. ..++.+++|+.|++++|++......... .....+..+++|+.||
T Consensus 126 ~-i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 126 K-ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp E-CCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred h-hccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 8 555543 3488999999999999987432210000 0001256778888776
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=1.1e-12 Score=129.08 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=104.8
Q ss_pred CceEEEEeecccCC--CCCccccCCCCCCEEEcCCCCCCC--chhhcCCCCCcEEEcccc-ccc--ccchhhhcCcCCCE
Q 005747 440 EQVRVINVSYMNLL--SLPSSLGLLSNLQTLSLYNCKLLD--ITVIRDLKKLEVLCLRGS-DIK--RLPVEVGELTLLRL 512 (679)
Q Consensus 440 ~~L~~L~l~~n~l~--~lp~~~~~l~~L~~L~L~~n~l~~--~~~~~~l~~L~~L~L~~n-~i~--~lp~~i~~l~~L~~ 512 (679)
.+|++||++++.++ .++..+.++++|++|+|++|.+++ +..++++++|++|+++++ .++ .+..-...+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 57899999988876 245557888999999999998876 577888899999999985 666 23333467889999
Q ss_pred EeccCCcCccc--cChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCCCcEEEEEee-cCC-CCCCcc-cccc
Q 005747 513 LDLRDCRELEI--IPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKHLISLELQIQ-DVN-TLPRGL-FLEK 587 (679)
Q Consensus 513 L~l~~n~~~~~--lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n-~l~-~lp~~~-~l~~ 587 (679)
|++++|..+.. ++..+....++|+.|+++++..... ...+...+.++++|++|++++| .++ .....+ .+++
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~----~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~ 201 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQ----KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 201 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSC----HHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccc----cccccccccccccccccccccccCCCchhhhhhcccCc
Confidence 99998754432 2222122347899999987532100 0112333466789999999865 455 233333 7788
Q ss_pred cceeEEEEcC
Q 005747 588 LERYKILIGG 597 (679)
Q Consensus 588 L~~L~l~~~~ 597 (679)
|++|++++|.
T Consensus 202 L~~L~L~~C~ 211 (284)
T d2astb2 202 LQHLSLSRCY 211 (284)
T ss_dssp CCEEECTTCT
T ss_pred CCEEECCCCC
Confidence 8888886643
No 31
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=1.8e-12 Score=127.67 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=99.3
Q ss_pred EEEeecccCCCCCccccCCCCCCEEEcCCCCCCC--c-hhhcCCCCCcEEEccccccc-ccchhhhcCcCCCEEeccCCc
Q 005747 444 VINVSYMNLLSLPSSLGLLSNLQTLSLYNCKLLD--I-TVIRDLKKLEVLCLRGSDIK-RLPVEVGELTLLRLLDLRDCR 519 (679)
Q Consensus 444 ~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~l~~--~-~~~~~l~~L~~L~L~~n~i~-~lp~~i~~l~~L~~L~l~~n~ 519 (679)
.+.++...+...........+|++|++++|.++. + ..+..+++|++|+|++|.++ ..+..+..+++|++|++++|.
T Consensus 27 ~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~ 106 (284)
T d2astb2 27 AFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106 (284)
T ss_dssp EEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred EeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccc
Confidence 4444444443322233456689999999998875 3 44788999999999999887 556778899999999999986
Q ss_pred CccccC-hhhhcCCcccceeecCCCCCCcchhhhcccccccccc-cCCCcEEEEEee--cCC--CCCCcc-cccccceeE
Q 005747 520 ELEIIP-PNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHE-LKHLISLELQIQ--DVN--TLPRGL-FLEKLERYK 592 (679)
Q Consensus 520 ~~~~lp-~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~-l~~L~~L~l~~n--~l~--~lp~~~-~l~~L~~L~ 592 (679)
.++... ..++.++++|++|++++|..... ......+.. .++|+.|++++. .++ .+.... .+++|+.|+
T Consensus 107 ~itd~~l~~l~~~~~~L~~L~ls~c~~~~~-----~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~ 181 (284)
T d2astb2 107 GFSEFALQTLLSSCSRLDELNLSWCFDFTE-----KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 181 (284)
T ss_dssp SCCHHHHHHHHHHCTTCCEEECCCCTTCCH-----HHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred cccccccchhhHHHHhcccccccccccccc-----ccchhhhcccccccchhhhcccccccccccccccccccccccccc
Confidence 554321 12245789999999998643111 112223333 368999999853 344 233222 678899999
Q ss_pred EEEcC
Q 005747 593 ILIGG 597 (679)
Q Consensus 593 l~~~~ 597 (679)
+++|.
T Consensus 182 L~~~~ 186 (284)
T d2astb2 182 LSDSV 186 (284)
T ss_dssp CTTCT
T ss_pred ccccc
Confidence 87654
No 32
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.18 E-value=2.1e-11 Score=119.62 Aligned_cols=200 Identities=12% Similarity=0.194 Sum_probs=116.6
Q ss_pred CCCCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCC-----CcCHHHHH
Q 005747 125 PNKDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSE-----SQDIRKIQ 199 (679)
Q Consensus 125 ~~~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~-----~~~~~~l~ 199 (679)
|......|+||++++++|.+. ..+++.|+|++|+|||+|++++.+..... ..|+.+.. ......+.
T Consensus 7 p~~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~ 77 (283)
T d2fnaa2 7 PKDNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNLP-----YIYLDLRKFEERNYISYKDFL 77 (283)
T ss_dssp CCCSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTCC-----EEEEEGGGGTTCSCCCHHHHH
T ss_pred CCCChhhCCChHHHHHHHHhc----cCCEEEEEcCCCCcHHHHHHHHHHHCCCC-----eEEEEeccccccccccHHHHH
Confidence 445578999999999998763 44789999999999999999998876432 45555432 22334444
Q ss_pred HHHHHHhC--------------CCC---------C---ccchhHHHHHHHHHHH--cCCceEEEEecCCCccchh-----
Q 005747 200 REIADKLG--------------LKF---------D---EESESGRARRLHDRLK--KEKRILVILDNIWGNLDLK----- 246 (679)
Q Consensus 200 ~~i~~~l~--------------~~~---------~---~~~~~~~~~~l~~~l~--~~k~~LlVlDdv~~~~~~~----- 246 (679)
..+..... ... . ..........+.+.+. .++++++|+|++.......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~~ 157 (283)
T d2fnaa2 78 LELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLL 157 (283)
T ss_dssp HHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCH
T ss_pred HHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccchHHHH
Confidence 44333221 000 0 0001111223333332 3678999999875432111
Q ss_pred -hcCCCCCCCCCCcEEEEeecCcchhccc-----------CCCcceEEecCCChHHHHHHHHHHhCCC-CCCccHHHHHH
Q 005747 247 -AAGIPHGDDHRGCKVLLTARSLDTLSTK-----------MDSQKNFSVSFLKEEEAWSLFKKMAGDY-VEGNELKEVAR 313 (679)
Q Consensus 247 -~l~~~~~~~~~gs~iivTtR~~~v~~~~-----------~~~~~~~~l~~L~~~e~~~Lf~~~~~~~-~~~~~~~~~~~ 313 (679)
.+.... ........+++++........ ......+.+++++.+++.+++.+.+... ...+. ..
T Consensus 158 ~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~~ 232 (283)
T d2fnaa2 158 PALAYAY-DNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFKD----YE 232 (283)
T ss_dssp HHHHHHH-HHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCCC----HH
T ss_pred HHHHHHH-HhhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCHHH----HH
Confidence 111010 112344555555543221100 0123578999999999999998765421 11222 46
Q ss_pred HHHHHcCCChHHHHHHHHHhhcCCC
Q 005747 314 DVAKECAGLPVAIVTVATALRDNNS 338 (679)
Q Consensus 314 ~I~~~~~glPlai~~~~~~L~~~~~ 338 (679)
+|++.++|+|..+..++..+....+
T Consensus 233 ~i~~~~~G~P~~L~~~~~~~~~~~~ 257 (283)
T d2fnaa2 233 VVYEKIGGIPGWLTYFGFIYLDNKN 257 (283)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHhCCCHHHHHHHHHHHHhccc
Confidence 8999999999999999877655343
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=3.7e-11 Score=106.11 Aligned_cols=105 Identities=14% Similarity=0.036 Sum_probs=69.7
Q ss_pred CCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccccccccCC
Q 005747 486 KLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKH 565 (679)
Q Consensus 486 ~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~ 565 (679)
....++.+++.+...|..+..+++|+.|++++|+.++.++...|.++++|+.|++++|.+ ....+..|..+++
T Consensus 9 ~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l-------~~i~~~~f~~l~~ 81 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL-------RFVAPDAFHFTPR 81 (156)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCC-------CEECTTGGGSCSC
T ss_pred CCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeecccc-------CCccccccccccc
Confidence 344566666666666666666777777777665556666666677777777777777776 3444566777777
Q ss_pred CcEEEEEeecCCCCCCcc-cccccceeEEEEcC
Q 005747 566 LISLELQIQDVNTLPRGL-FLEKLERYKILIGG 597 (679)
Q Consensus 566 L~~L~l~~n~l~~lp~~~-~l~~L~~L~l~~~~ 597 (679)
|++|+|++|+++.+|... ...+|+.|++++|.
T Consensus 82 L~~L~Ls~N~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp CCEEECCSSCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred ccceeccCCCCcccChhhhccccccccccCCCc
Confidence 777777777777777665 44456666665554
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.12 E-value=1.7e-11 Score=124.29 Aligned_cols=230 Identities=13% Similarity=0.058 Sum_probs=144.8
Q ss_pred CceEEEEeecccCC-----CCCccccCCCCCCEEEcCCCCCCCc------------hhhcCCCCCcEEEcccccccc---
Q 005747 440 EQVRVINVSYMNLL-----SLPSSLGLLSNLQTLSLYNCKLLDI------------TVIRDLKKLEVLCLRGSDIKR--- 499 (679)
Q Consensus 440 ~~L~~L~l~~n~l~-----~lp~~~~~l~~L~~L~L~~n~l~~~------------~~~~~l~~L~~L~L~~n~i~~--- 499 (679)
.+++.|+|++|.+. .+...+...++|+.|+++++....+ ..+...++|+.|+|++|.++.
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 110 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 110 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccc
Confidence 57888888888775 2344566778888888887764321 234567888899998887763
Q ss_pred --cchhhhcCcCCCEEeccCCcCccccC----hh--------hhcCCcccceeecCCCCCCcchhhhcccccccccccCC
Q 005747 500 --LPVEVGELTLLRLLDLRDCRELEIIP----PN--------VLSKLSHLEELYMGPRSFDKWEVEVEGVKNASLHELKH 565 (679)
Q Consensus 500 --lp~~i~~l~~L~~L~l~~n~~~~~lp----~~--------~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~l~~l~~ 565 (679)
+...+...++|++|++++|.+...-. .. .....+.|+.|++++|.+.... ...+...+...++
T Consensus 111 ~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~---~~~l~~~l~~~~~ 187 (344)
T d2ca6a1 111 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGS---MKEWAKTFQSHRL 187 (344)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGG---HHHHHHHHHHCTT
T ss_pred cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccc---cccccchhhhhhh
Confidence 44556677888999988876321100 00 0235667888888888774321 1123445566788
Q ss_pred CcEEEEEeecCCC------CCCcc-cccccceeEEEEcCcccc--------ccccccccEEEEecCccccch-HHHHHH-
Q 005747 566 LISLELQIQDVNT------LPRGL-FLEKLERYKILIGGVWGW--------EYADIWCREFKIDLDSKIRLK-DGLILK- 628 (679)
Q Consensus 566 L~~L~l~~n~l~~------lp~~~-~l~~L~~L~l~~~~~~~~--------~~~~~~l~~l~l~~~~~~~~~-~~~~~~- 628 (679)
|+.|++++|.++. +...+ ..++|+.|+++.|.+... ......++.|.++.|...... ..+...
T Consensus 188 L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l 267 (344)
T d2ca6a1 188 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAF 267 (344)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHH
T ss_pred hcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHh
Confidence 8888888888763 22223 567888888877764321 123446777777666543221 112222
Q ss_pred ----hcccceeecccccccc--ccccccccCcCCCCCccEEEEecCcCccC
Q 005747 629 ----LQGIEDLWLSDLEERD--VNYFVNELDKVGPSQLKHLYIRGSHLTLN 673 (679)
Q Consensus 629 ----l~~L~~L~L~~~~~~~--l~~i~~~l~~~~~~~L~~L~l~~n~l~~l 673 (679)
.++|++|++++|++.. +..+...+ ....++|++|+|++|.+...
T Consensus 268 ~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l-~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 268 SKLENIGLQTLRLQYNEIELDAVRTLKTVI-DEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HTCSSCCCCEEECCSSCCBHHHHHHHHHHH-HHHCTTCCEEECTTSBSCTT
T ss_pred hhccCCCCCEEECCCCcCChHHHHHHHHHH-HccCCCCCEEECCCCcCCCc
Confidence 2569999999988432 22232222 12468999999999998653
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=1.6e-10 Score=102.01 Aligned_cols=101 Identities=21% Similarity=0.169 Sum_probs=73.0
Q ss_pred EEEEeecccCCCCCccccCCCCCCEEEcCCCC-CCC--chhhcCCCCCcEEEcccccccccc-hhhhcCcCCCEEeccCC
Q 005747 443 RVINVSYMNLLSLPSSLGLLSNLQTLSLYNCK-LLD--ITVIRDLKKLEVLCLRGSDIKRLP-VEVGELTLLRLLDLRDC 518 (679)
Q Consensus 443 ~~L~l~~n~l~~lp~~~~~l~~L~~L~L~~n~-l~~--~~~~~~l~~L~~L~L~~n~i~~lp-~~i~~l~~L~~L~l~~n 518 (679)
..++.+++++.++|..+..+++|+.|++++|+ ++. ...|.++++|+.|+|++|+|+.++ ..+..+++|++|+|++|
T Consensus 11 ~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 11 SGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp SCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred CeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 34667777777777777778888888886654 665 345777888888888888888774 35677888888888887
Q ss_pred cCccccChhhhcCCcccceeecCCCCC
Q 005747 519 RELEIIPPNVLSKLSHLEELYMGPRSF 545 (679)
Q Consensus 519 ~~~~~lp~~~~~~l~~L~~L~l~~n~~ 545 (679)
. ++.+|.+.|..+ +|++|+|++|.+
T Consensus 91 ~-l~~l~~~~~~~~-~l~~L~L~~Np~ 115 (156)
T d2ifga3 91 A-LESLSWKTVQGL-SLQELVLSGNPL 115 (156)
T ss_dssp C-CSCCCSTTTCSC-CCCEEECCSSCC
T ss_pred C-CcccChhhhccc-cccccccCCCcc
Confidence 7 566777655443 677888887776
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=8.7e-11 Score=123.72 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=19.1
Q ss_pred ccceeecccccccc--ccccccccCcCCCCCccEEEEecCcCc
Q 005747 631 GIEDLWLSDLEERD--VNYFVNELDKVGPSQLKHLYIRGSHLT 671 (679)
Q Consensus 631 ~L~~L~L~~~~~~~--l~~i~~~l~~~~~~~L~~L~l~~n~l~ 671 (679)
.|+.|+|++|++.. +..+...+ ...++|++|+|++|+++
T Consensus 370 ~L~~L~Ls~n~i~~~~~~~l~~~l--~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 370 VLRVLWLADCDVSDSSCSSLAATL--LANHSLRELDLSNNCLG 410 (460)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHH--HHCCCCCEEECCSSSCC
T ss_pred CCCEEECCCCCCChHHHHHHHHHH--hcCCCCCEEECCCCcCC
Confidence 35666666655321 11122222 23466667777766664
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=6.1e-11 Score=124.95 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=15.4
Q ss_pred CCCEEEcCCCCCCCc------hhhcCCCCCcEEEcccccc
Q 005747 464 NLQTLSLYNCKLLDI------TVIRDLKKLEVLCLRGSDI 497 (679)
Q Consensus 464 ~L~~L~L~~n~l~~~------~~~~~l~~L~~L~L~~n~i 497 (679)
+|++|+|++|.+++. ..+..+++|++|++++|.+
T Consensus 85 ~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 85 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence 455555555544431 2234444555555554443
No 38
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.90 E-value=4.2e-09 Score=99.06 Aligned_cols=186 Identities=15% Similarity=0.103 Sum_probs=118.7
Q ss_pred CCCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHH
Q 005747 126 NKDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADK 205 (679)
Q Consensus 126 ~~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~ 205 (679)
|....+++|.++.++.|..|+.++..+-+.++|++|+||||+|+.+++.......-..+..++.++......+...+...
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~~i~~~~~~~ 90 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHF 90 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHHHH
T ss_pred CCCHHHhcCCHHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCceehhhHHHHH
Confidence 34567889999999999999998887778899999999999999999886543111235556666665555444333222
Q ss_pred hCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCccc--hhhcCCCCCCCCCCcEEEEeecCcc-hhcccCCCcceEE
Q 005747 206 LGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNLD--LKAAGIPHGDDHRGCKVLLTARSLD-TLSTKMDSQKNFS 282 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~--~~~l~~~~~~~~~gs~iivTtR~~~-v~~~~~~~~~~~~ 282 (679)
....... ..++.-++|+|++..... ...+...+......++++++|.+.. +..........++
T Consensus 91 ~~~~~~~--------------~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~ 156 (224)
T d1sxjb2 91 AQKKLHL--------------PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILR 156 (224)
T ss_dssp HHBCCCC--------------CTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEE
T ss_pred HHhhccC--------------CCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHHHhh
Confidence 2111000 014566889999876532 2222222222344566777766533 2222234456899
Q ss_pred ecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHHH
Q 005747 283 VSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVAI 326 (679)
Q Consensus 283 l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPlai 326 (679)
+.+++.++-...+...+..+...-. .+....|++.|+|.+-.+
T Consensus 157 ~~~~~~~~i~~~l~~i~~~e~~~i~-~~~l~~I~~~s~Gd~R~a 199 (224)
T d1sxjb2 157 YSKLSDEDVLKRLLQIIKLEDVKYT-NDGLEAIIFTAEGDMRQA 199 (224)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTCCBC-HHHHHHHHHHHTTCHHHH
T ss_pred hcccchhhhHHHHHHHHHhcccCCC-HHHHHHHHHHcCCcHHHH
Confidence 9999999999999887752222111 356788999999987543
No 39
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.89 E-value=6.5e-09 Score=98.00 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=114.2
Q ss_pred CCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHh
Q 005747 127 KDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKL 206 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l 206 (679)
....+++|.++.++.|..|+.++..+.+.++|+.|+||||+|+.+++..........+.-.+.+...+.......+....
T Consensus 11 ~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 90 (227)
T d1sxjc2 11 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFA 90 (227)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchhhcc
Confidence 44567899999999999999988777688999999999999999999865433223344445555444433222221111
Q ss_pred CCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCccc--hhhcCCCCCCCCCCcEEEEeecCcchh-cccCCCcceEEe
Q 005747 207 GLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNLD--LKAAGIPHGDDHRGCKVLLTARSLDTL-STKMDSQKNFSV 283 (679)
Q Consensus 207 ~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~--~~~l~~~~~~~~~gs~iivTtR~~~v~-~~~~~~~~~~~l 283 (679)
... .+..+++-++|+|++..... -..+...+......++++++|....-. .........+++
T Consensus 91 ~~~---------------~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~ 155 (227)
T d1sxjc2 91 STR---------------QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRF 155 (227)
T ss_dssp HBC---------------CSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEEC
T ss_pred ccc---------------cccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhhhcc
Confidence 000 00123446889999876522 222222222234567788887753322 222344568899
Q ss_pred cCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCCh
Q 005747 284 SFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLP 323 (679)
Q Consensus 284 ~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glP 323 (679)
.+++.++-..++.+.+......-+ .+....|++.++|-.
T Consensus 156 ~~~~~~~i~~~l~~I~~~e~i~i~-~~~l~~i~~~s~Gd~ 194 (227)
T d1sxjc2 156 QPLPQEAIERRIANVLVHEKLKLS-PNAEKALIELSNGDM 194 (227)
T ss_dssp CCCCHHHHHHHHHHHHHTTTCCBC-HHHHHHHHHHHTTCH
T ss_pred ccccccccccccccccccccccCC-HHHHHHHHHHcCCcH
Confidence 999999999998887753322221 356788999998864
No 40
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.83 E-value=4.8e-10 Score=113.40 Aligned_cols=218 Identities=16% Similarity=0.086 Sum_probs=142.0
Q ss_pred CCCccccCCCCCCEEEcCCCCCCC--c----hhhcCCCCCcEEEcccccccc-----------cchhhhcCcCCCEEecc
Q 005747 454 SLPSSLGLLSNLQTLSLYNCKLLD--I----TVIRDLKKLEVLCLRGSDIKR-----------LPVEVGELTLLRLLDLR 516 (679)
Q Consensus 454 ~lp~~~~~l~~L~~L~L~~n~l~~--~----~~~~~l~~L~~L~L~~n~i~~-----------lp~~i~~l~~L~~L~l~ 516 (679)
.+...+.....|+.|+|++|.+.. . ..+...++|+.|+++++.... +...+...++|+.|+|+
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 455667888999999999998865 2 346788999999999875442 22345668899999999
Q ss_pred CCcCccc----cChhhhcCCcccceeecCCCCCCcchhhh-cc-----cccccccccCCCcEEEEEeecCCC-----CCC
Q 005747 517 DCRELEI----IPPNVLSKLSHLEELYMGPRSFDKWEVEV-EG-----VKNASLHELKHLISLELQIQDVNT-----LPR 581 (679)
Q Consensus 517 ~n~~~~~----lp~~~~~~l~~L~~L~l~~n~~~~~~~~~-~~-----~~~~~l~~l~~L~~L~l~~n~l~~-----lp~ 581 (679)
+|.+... +... +...++|++|++++|.+....... .. .........+.|+.|++++|.++. +..
T Consensus 102 ~n~i~~~~~~~l~~~-l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~ 180 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDF-LSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 180 (344)
T ss_dssp SCCCCTTTHHHHHHH-HHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred ccccccccccchhhh-hcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccc
Confidence 9874332 2222 556789999999999874321100 00 001112345789999999998863 222
Q ss_pred cc-cccccceeEEEEcCcccc---------ccccccccEEEEecCccccch-HHH---HHHhcccceeecccccccc--c
Q 005747 582 GL-FLEKLERYKILIGGVWGW---------EYADIWCREFKIDLDSKIRLK-DGL---ILKLQGIEDLWLSDLEERD--V 645 (679)
Q Consensus 582 ~~-~l~~L~~L~l~~~~~~~~---------~~~~~~l~~l~l~~~~~~~~~-~~~---~~~l~~L~~L~L~~~~~~~--l 645 (679)
.+ ..++|+.|+++.|.+..- ......++.|.++.|...... ..+ ....++|++|+|++|.+.. .
T Consensus 181 ~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~ 260 (344)
T d2ca6a1 181 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 260 (344)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred hhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhh
Confidence 22 567899999988875431 223346778888766532211 112 2335789999999998432 2
Q ss_pred cccccccCcCCCCCccEEEEecCcCcc
Q 005747 646 NYFVNELDKVGPSQLKHLYIRGSHLTL 672 (679)
Q Consensus 646 ~~i~~~l~~~~~~~L~~L~l~~n~l~~ 672 (679)
..+...+.....++|++|++++|.++.
T Consensus 261 ~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 261 AAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 223222322345789999999999863
No 41
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.79 E-value=1e-08 Score=96.87 Aligned_cols=181 Identities=15% Similarity=0.121 Sum_probs=109.8
Q ss_pred CCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCC-eEEEEEcCCCcCHHHHHHHHHHH
Q 005747 127 KDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFD-QVVFSEVSESQDIRKIQREIADK 205 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~-~~~wv~v~~~~~~~~l~~~i~~~ 205 (679)
....+++|.++.++.+..|+.++..+-+.++|++|+||||+|+.+++..... .+. ..+.++.+...+...+...+...
T Consensus 21 ~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~-~~~~~~~e~n~s~~~~~~~~~~~~~~~ 99 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGE-NWRHNFLELNASDERGINVIREKVKEF 99 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGG-GHHHHEEEEETTCHHHHHTTHHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHHHhc-ccCCCeeEEecCcccchhHHHHHHHHH
Confidence 3456789999999999999998888889999999999999999999875432 121 23344554432222211111111
Q ss_pred hCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCc--cchhhcCCCCCCCCCCcEEEEeecCcc-hhcccCCCcceEE
Q 005747 206 LGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGN--LDLKAAGIPHGDDHRGCKVLLTARSLD-TLSTKMDSQKNFS 282 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~--~~~~~l~~~~~~~~~gs~iivTtR~~~-v~~~~~~~~~~~~ 282 (679)
.... .....++.++++|++... ..+..+...+........+|.||.... +..........+.
T Consensus 100 ~~~~---------------~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~ 164 (231)
T d1iqpa2 100 ARTK---------------PIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFR 164 (231)
T ss_dssp HHSC---------------CGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEE
T ss_pred Hhhh---------------hccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCcccccc
Confidence 1000 001245678999998654 223333222222233445666665432 2222222346899
Q ss_pred ecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChH
Q 005747 283 VSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPV 324 (679)
Q Consensus 283 l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPl 324 (679)
+.+.+.++....+...+....-.- -.+..+.|++.|+|-.-
T Consensus 165 ~~~~~~~~~~~~l~~~~~~e~i~i-~~~~l~~I~~~~~gdiR 205 (231)
T d1iqpa2 165 FRPLRDEDIAKRLRYIAENEGLEL-TEEGLQAILYIAEGDMR 205 (231)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTCEE-CHHHHHHHHHHHTTCHH
T ss_pred ccccchhhHHHHHHHHHHHhCCCC-CHHHHHHHHHHcCCCHH
Confidence 999999999999988775432211 14567889999988653
No 42
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.79 E-value=1.2e-07 Score=89.79 Aligned_cols=185 Identities=14% Similarity=0.205 Sum_probs=113.9
Q ss_pred CCcccccchHHHHHHHHHHhcCCC-ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCC-------------------eEEE
Q 005747 127 KDYEAFESRMSILNEITDALKNGD-VNTLGIYGIGGIGKTTLAKEVARRAENDKLFD-------------------QVVF 186 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~~-~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~-------------------~~~w 186 (679)
....+++|.++.++.+..++..++ .+.+.++|+.|+||||+|+.+++........+ .++.
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 88 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIE 88 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEE
T ss_pred CCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCCeEEE
Confidence 345688999999999999998665 45688999999999999999988754321111 1233
Q ss_pred EEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc--chhhcCCCCCCCCCCcEEEEe
Q 005747 187 SEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL--DLKAAGIPHGDDHRGCKVLLT 264 (679)
Q Consensus 187 v~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~--~~~~l~~~~~~~~~gs~iivT 264 (679)
++.+.......+ +.+.+.+.... ..+++.++|+|+++... ....+...+......+++|++
T Consensus 89 ~~~~~~~~i~~i-r~~~~~~~~~~----------------~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~ 151 (239)
T d1njfa_ 89 IDAASRTKVEDT-RDLLDNVQYAP----------------ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLA 151 (239)
T ss_dssp EETTCSSSHHHH-HHHHHSCCCSC----------------SSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEE
T ss_pred ecchhcCCHHHH-HHHHHHHHhcc----------------ccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 333333333222 22322221110 02456699999997652 222333333333456778888
Q ss_pred ecCcchh-cccCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChH-HHHHH
Q 005747 265 ARSLDTL-STKMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPV-AIVTV 329 (679)
Q Consensus 265 tR~~~v~-~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPl-ai~~~ 329 (679)
|.+..-. .........+.+.+++.++....+...+......-+ ++....|++.++|.+- |+..+
T Consensus 152 tn~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~-~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 152 TTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHE-PRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp ESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBC-HHHHHHHHHHTTTCHHHHHHHH
T ss_pred cCCccccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCC-HHHHHHHHHHcCCCHHHHHHHH
Confidence 7764333 222334568999999999998888877652222111 3567889999999885 44433
No 43
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=98.71 E-value=4e-07 Score=87.92 Aligned_cols=171 Identities=14% Similarity=0.172 Sum_probs=110.6
Q ss_pred cccccchHHHHHHHHHHhc------CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHH
Q 005747 129 YEAFESRMSILNEITDALK------NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREI 202 (679)
Q Consensus 129 ~~~~~gr~~~~~~l~~~L~------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i 202 (679)
+..++||+.+++++.++|. ....+.+.|+|++|+||||+|+.+++....... ...+|+..............+
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 93 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT-ARFVYINGFIYRNFTAIIGEI 93 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCC-CEEEEEETTTCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhcccC-CcEEEecchhhhhhhhhhhhh
Confidence 3467899999999999885 234578999999999999999999999865422 335677888888888999999
Q ss_pred HHHhCCCCCc--cchhHHHHHHHHHHH-cCCceEEEEecCCCccc-----hhhcCCCCCC-CCCCcEEEEeecCcchhcc
Q 005747 203 ADKLGLKFDE--ESESGRARRLHDRLK-KEKRILVILDNIWGNLD-----LKAAGIPHGD-DHRGCKVLLTARSLDTLST 273 (679)
Q Consensus 203 ~~~l~~~~~~--~~~~~~~~~l~~~l~-~~k~~LlVlDdv~~~~~-----~~~l~~~~~~-~~~gs~iivTtR~~~v~~~ 273 (679)
....+..... .........+.+.+. ......+++|++++... ...+...... ......+|.++........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 173 (276)
T d1fnna2 94 ARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNN 173 (276)
T ss_dssp HHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHHT
T ss_pred HHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEEeecCCchhhhhh
Confidence 9888765432 223334444444443 34567788888765421 1112111111 1223345555554332210
Q ss_pred ------cCCCcceEEecCCChHHHHHHHHHHhC
Q 005747 274 ------KMDSQKNFSVSFLKEEEAWSLFKKMAG 300 (679)
Q Consensus 274 ------~~~~~~~~~l~~L~~~e~~~Lf~~~~~ 300 (679)
.......+.+.+++.++.++++.+++.
T Consensus 174 ~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~ 206 (276)
T d1fnna2 174 LDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAK 206 (276)
T ss_dssp SCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHH
T ss_pred cchhhhhhhcchhccccchhHHHHHHHHHHHHH
Confidence 011234688999999999999987653
No 44
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.66 E-value=2.4e-07 Score=87.70 Aligned_cols=155 Identities=16% Similarity=0.183 Sum_probs=98.8
Q ss_pred cccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEE-EEcCCCcCHHHHHHHHHHH
Q 005747 131 AFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVF-SEVSESQDIRKIQREIADK 205 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~w-v~v~~~~~~~~l~~~i~~~ 205 (679)
.++||+++++++++.|......-+.++|.+|+|||+++..++.+....+ ..+..+| ++++.-.
T Consensus 19 ~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~li------------ 86 (268)
T d1r6bx2 19 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL------------ 86 (268)
T ss_dssp CCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---------------
T ss_pred cccChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHh------------
Confidence 4679999999999999866667788999999999999999998754322 1233444 3333210
Q ss_pred hCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc----------chhhcCCCCCCCCCCcEEEEeecCcchhccc-
Q 005747 206 LGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL----------DLKAAGIPHGDDHRGCKVLLTARSLDTLSTK- 274 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~----------~~~~l~~~~~~~~~gs~iivTtR~~~v~~~~- 274 (679)
-|.. ....-.+....+.+.+.+.++.++++|++.... +...+..|+.. ...-++|.||..++.....
T Consensus 87 ag~~-~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~-rg~i~vIgatT~eey~~~~e 164 (268)
T d1r6bx2 87 AGTK-YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS-SGKIRVIGSTTYQEFSNIFE 164 (268)
T ss_dssp CCCC-CSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS-SCCCEEEEEECHHHHHCCCC
T ss_pred ccCc-cchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHh-CCCCeEEEeCCHHHHHHHHh
Confidence 0111 111223345556666655677999999975431 22333333332 3356888888876553211
Q ss_pred -----CCCcceEEecCCChHHHHHHHHHHh
Q 005747 275 -----MDSQKNFSVSFLKEEEAWSLFKKMA 299 (679)
Q Consensus 275 -----~~~~~~~~l~~L~~~e~~~Lf~~~~ 299 (679)
......+.+++++.+++..++....
T Consensus 165 ~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 165 KDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp CTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred hcHHHHhhhcccccCCCCHHHHHHHHHHhh
Confidence 1123589999999999999987644
No 45
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.66 E-value=3.1e-08 Score=93.83 Aligned_cols=191 Identities=13% Similarity=0.129 Sum_probs=113.4
Q ss_pred CCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCC-CCCeEEEEEcCCCcCHHHHHHHHHHH
Q 005747 127 KDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDK-LFDQVVFSEVSESQDIRKIQREIADK 205 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~-~F~~~~wv~v~~~~~~~~l~~~i~~~ 205 (679)
....+++|+++.++.+..|+.....+.+.++|++|+||||+|+.+++...... .......++.+.......+...+-..
T Consensus 9 ~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
T d1sxjd2 9 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNF 88 (237)
T ss_dssp SSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHHHHH
Confidence 34566889999999999999988777788999999999999999998743211 12334555666655554443333222
Q ss_pred hCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc--chhhcCCCCCCCCCCcEEEEeecCcc-hhcccCCCcceEE
Q 005747 206 LGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL--DLKAAGIPHGDDHRGCKVLLTARSLD-TLSTKMDSQKNFS 282 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~--~~~~l~~~~~~~~~gs~iivTtR~~~-v~~~~~~~~~~~~ 282 (679)
......... .. .......++.-++|+|++.... ....+..........+++|+|+.... +..........++
T Consensus 89 ~~~~~~~~~-~~----~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~~i~ 163 (237)
T d1sxjd2 89 ARLTVSKPS-KH----DLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFR 163 (237)
T ss_dssp HHSCCCCCC-TT----HHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSEEEE
T ss_pred hhhhhhhhh-HH----HHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhhhhc
Confidence 111111110 00 1111112344479999986542 22222211222234556777666532 2221122236889
Q ss_pred ecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCCh
Q 005747 283 VSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLP 323 (679)
Q Consensus 283 l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glP 323 (679)
+.+++.++...++...+....-.-+ .+..+.|++.++|-+
T Consensus 164 f~~~~~~~~~~~L~~i~~~e~i~i~-~~~l~~ia~~s~gd~ 203 (237)
T d1sxjd2 164 FKALDASNAIDRLRFISEQENVKCD-DGVLERILDISAGDL 203 (237)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTCCCC-HHHHHHHHHHTSSCH
T ss_pred cccccccccchhhhhhhhhhcCcCC-HHHHHHHHHHcCCCH
Confidence 9999999999999887753322111 466788999998854
No 46
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.60 E-value=8.1e-08 Score=91.80 Aligned_cols=193 Identities=13% Similarity=0.116 Sum_probs=101.0
Q ss_pred CCcccccchHHHHHHHHHHhcCC-CccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEEEEcCCC---------
Q 005747 127 KDYEAFESRMSILNEITDALKNG-DVNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVFSEVSES--------- 192 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~-~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~wv~v~~~--------- 192 (679)
....+++|+++..+.|..++... ...-+.++|++|+||||+|+.+++...... .++...+...+..
T Consensus 8 ~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (252)
T d1sxje2 8 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSS 87 (252)
T ss_dssp CSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCEEC
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchhhhhhccC
Confidence 34567899999999998888644 345577999999999999999999753211 1122212111100
Q ss_pred ------------cCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc--chhhcCCCCCCCCCC
Q 005747 193 ------------QDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL--DLKAAGIPHGDDHRG 258 (679)
Q Consensus 193 ------------~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~--~~~~l~~~~~~~~~g 258 (679)
..................... ...- .....++.-++|+|++.... .+..+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~ 161 (252)
T d1sxje2 88 PYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD-----FQDS-KDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKN 161 (252)
T ss_dssp SSEEEECCC----CCHHHHHHHHHHHTTTTC------------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTTT
T ss_pred CccceeeecccccCCcceeeehhhhhhhhhhhh-----hhhc-ccccCCCceEEEeccccccccccchhhhccccccccc
Confidence 001111111111111000000 0000 00111344588999987642 223232222223455
Q ss_pred cEEEEeecCcchh-cccCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHH
Q 005747 259 CKVLLTARSLDTL-STKMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVA 325 (679)
Q Consensus 259 s~iivTtR~~~v~-~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPla 325 (679)
+++|+||.+.+.. .........+++.+++.++..+++...+.........++....|++.+.|.+-.
T Consensus 162 ~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ 229 (252)
T d1sxje2 162 IRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRV 229 (252)
T ss_dssp EEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHH
T ss_pred ccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHH
Confidence 7778877764322 111122357899999999999998876642111111135667889999887643
No 47
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.49 E-value=3.5e-07 Score=87.32 Aligned_cols=188 Identities=14% Similarity=0.098 Sum_probs=106.7
Q ss_pred CCcccccchHHHHHHHHHHhcC-----------------CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEc
Q 005747 127 KDYEAFESRMSILNEITDALKN-----------------GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEV 189 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~-----------------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v 189 (679)
....+++|.++.+++|.+|+.. ...+.+.++|++|+||||+|+.+++.... .++++..
T Consensus 11 ~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~-----~~~~~~~ 85 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGY-----DILEQNA 85 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTC-----EEEEECT
T ss_pred CCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHh-----hhhcccc
Confidence 3457889999999999998842 23468999999999999999999987643 2566777
Q ss_pred CCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCccc-----hhhcCCCCCCCCCCcEEEEe
Q 005747 190 SESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNLD-----LKAAGIPHGDDHRGCKVLLT 264 (679)
Q Consensus 190 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~-----~~~l~~~~~~~~~gs~iivT 264 (679)
+...+...+... .+..-.......... .........++..++++|++..... +..+..... .....+++|
T Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~--~~~~~ii~i 160 (253)
T d1sxja2 86 SDVRSKTLLNAG-VKNALDNMSVVGYFK--HNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCR--KTSTPLILI 160 (253)
T ss_dssp TSCCCHHHHHHT-GGGGTTBCCSTTTTT--C----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHH--HCSSCEEEE
T ss_pred ccchhhHHHHHH-HHHHhhcchhhhhhh--hhhhcccccccceEEEeeeccccccchhhhhHHHhhhhc--ccccccccc
Confidence 666555443322 222111100000000 0000001135677889999764321 111111000 111234444
Q ss_pred ecC--cchhcccCCCcceEEecCCChHHHHHHHHHHhC--CCCCCccHHHHHHHHHHHcCCCh-HHHH
Q 005747 265 ARS--LDTLSTKMDSQKNFSVSFLKEEEAWSLFKKMAG--DYVEGNELKEVARDVAKECAGLP-VAIV 327 (679)
Q Consensus 265 tR~--~~v~~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~--~~~~~~~~~~~~~~I~~~~~glP-lai~ 327 (679)
+.. .............+++.+++.++....+..... +..-++ +...+|++.++|-. -|+.
T Consensus 161 ~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~---~~l~~i~~~s~GDiR~ai~ 225 (253)
T d1sxja2 161 CNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP---NVIDRLIQTTRGDIRQVIN 225 (253)
T ss_dssp ESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT---THHHHHHHHTTTCHHHHHH
T ss_pred cccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCH---HHHHHHHHhCCCcHHHHHH
Confidence 432 222232334456899999999999998887663 111121 34678889999966 4443
No 48
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.46 E-value=2.9e-06 Score=82.16 Aligned_cols=172 Identities=20% Similarity=0.217 Sum_probs=104.4
Q ss_pred cccccchHHHHHHHHHHhc----CC----C-ccEEEEEcCCCCcHHHHHHHHHHHhcc----CCCCCeEEEEEcCCCcCH
Q 005747 129 YEAFESRMSILNEITDALK----NG----D-VNTLGIYGIGGIGKTTLAKEVARRAEN----DKLFDQVVFSEVSESQDI 195 (679)
Q Consensus 129 ~~~~~gr~~~~~~l~~~L~----~~----~-~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~v~~~~~~ 195 (679)
+..+.||+.++++|.+++. ++ . ..++.++|++|+|||++++.+++.... ........++.+....+.
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccch
Confidence 4577899999999988763 11 1 224667899999999999999987532 112245677888888888
Q ss_pred HHHHHHHHHHhCCCCCc--cchhHHHHHHHHHHH-cCCceEEEEecCCCcc--------c---hhhc---CCCCCCCCCC
Q 005747 196 RKIQREIADKLGLKFDE--ESESGRARRLHDRLK-KEKRILVILDNIWGNL--------D---LKAA---GIPHGDDHRG 258 (679)
Q Consensus 196 ~~l~~~i~~~l~~~~~~--~~~~~~~~~l~~~l~-~~k~~LlVlDdv~~~~--------~---~~~l---~~~~~~~~~g 258 (679)
......+...++..... .........+..... .+...++++|.+.... . +..+ .........-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~ 174 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRI 174 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCBE
T ss_pred hhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhcccce
Confidence 88888888888765432 222233334444333 3556788888764321 0 1111 1111112222
Q ss_pred cEEEEeecCcchh-------cccCCCcceEEecCCChHHHHHHHHHHhC
Q 005747 259 CKVLLTARSLDTL-------STKMDSQKNFSVSFLKEEEAWSLFKKMAG 300 (679)
Q Consensus 259 s~iivTtR~~~v~-------~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~ 300 (679)
..|++++...... .........+.+++++.++..+++..++.
T Consensus 175 ~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~ 223 (287)
T d1w5sa2 175 GFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAE 223 (287)
T ss_dssp EEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHH
T ss_pred eEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHH
Confidence 2344444332110 11122346889999999999999998763
No 49
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.45 E-value=1e-05 Score=75.87 Aligned_cols=174 Identities=17% Similarity=0.174 Sum_probs=101.8
Q ss_pred CCcccccchHHHHHHHHHHhc-----CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHH
Q 005747 127 KDYEAFESRMSILNEITDALK-----NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQRE 201 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~-----~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~ 201 (679)
....+++|.+..+++|..|+. ....+-+.++|++|+||||+|+.+++..... .+.++.+......++..
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~-----~~~~~~~~~~~~~~~~~- 79 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN-----IHVTSGPVLVKQGDMAA- 79 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHH-
T ss_pred CcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhccCCC-----cccccCcccccHHHHHH-
Confidence 345778999999999998875 3334567899999999999999999986532 33444444444433222
Q ss_pred HHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCccc---------hhhcC-----------CCCCCCCCCcEE
Q 005747 202 IADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNLD---------LKAAG-----------IPHGDDHRGCKV 261 (679)
Q Consensus 202 i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~---------~~~l~-----------~~~~~~~~gs~i 261 (679)
++... +++..+++|.+..... .+... .......+...+
T Consensus 80 ~~~~~----------------------~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (238)
T d1in4a2 80 ILTSL----------------------ERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTL 137 (238)
T ss_dssp HHHHC----------------------CTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEE
T ss_pred HHHhh----------------------ccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEE
Confidence 22111 2345555665533210 00000 000011234456
Q ss_pred EEeecCcchh-c-ccCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHHHHHH
Q 005747 262 LLTARSLDTL-S-TKMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVAIVTV 329 (679)
Q Consensus 262 ivTtR~~~v~-~-~~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPlai~~~ 329 (679)
|.+|...... . ........+.++..+.++...++...+...... ..++....|++.++|.+-.+..+
T Consensus 138 I~at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~i~~~s~gd~R~ai~~ 206 (238)
T d1in4a2 138 VGATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE-IEDAAAEMIAKRSRGTPRIAIRL 206 (238)
T ss_dssp EEEESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCC-BCHHHHHHHHHTSTTCHHHHHHH
T ss_pred EEecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccch-hhHHHHHHHHHhCCCCHHHHHHH
Confidence 6656553322 1 112334567899999999999998877532221 22456888999999987655433
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.45 E-value=2.7e-06 Score=77.87 Aligned_cols=170 Identities=14% Similarity=0.069 Sum_probs=103.9
Q ss_pred chHHHHHHHHHHhcCCC-ccEEEEEcCCCCcHHHHHHHHHHHhccCC-------------------CCCeEEEEEcCCC-
Q 005747 134 SRMSILNEITDALKNGD-VNTLGIYGIGGIGKTTLAKEVARRAENDK-------------------LFDQVVFSEVSES- 192 (679)
Q Consensus 134 gr~~~~~~l~~~L~~~~-~~vi~I~G~gGiGKTtLa~~v~~~~~~~~-------------------~F~~~~wv~v~~~- 192 (679)
..+...+++.+.+..+. .+.+.++|+.|+||||+|+.+++..-... ......++.....
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK 85 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTC
T ss_pred ccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcc
Confidence 44566788888887666 55799999999999999999998642110 0111122221111
Q ss_pred --cCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc--chhhcCCCCCCCCCCcEEEEeecCc
Q 005747 193 --QDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL--DLKAAGIPHGDDHRGCKVLLTARSL 268 (679)
Q Consensus 193 --~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~--~~~~l~~~~~~~~~gs~iivTtR~~ 268 (679)
....+ .+++.+.+.... ..+++-++|+|+++... ....+...+.....++.+|+||++.
T Consensus 86 ~~i~~~~-ir~l~~~~~~~~----------------~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~ 148 (207)
T d1a5ta2 86 NTLGVDA-VREVTEKLNEHA----------------RLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREP 148 (207)
T ss_dssp SSBCHHH-HHHHHHHTTSCC----------------TTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCG
T ss_pred cccccch-hhHHhhhhhhcc----------------ccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecCh
Confidence 11111 122222222110 12566799999997653 3344443443445678888888874
Q ss_pred c-hhcccCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHHH
Q 005747 269 D-TLSTKMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVAI 326 (679)
Q Consensus 269 ~-v~~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPlai 326 (679)
. +..........+.+.++++++....+.+...- -++....|++.++|.|-.+
T Consensus 149 ~~ll~tI~SRc~~i~~~~~~~~~~~~~L~~~~~~------~~~~~~~i~~~s~Gs~r~a 201 (207)
T d1a5ta2 149 ERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM------SQDALLAALRLSAGSPGAA 201 (207)
T ss_dssp GGSCHHHHTTSEEEECCCCCHHHHHHHHHHHCCC------CHHHHHHHHHHTTTCHHHH
T ss_pred hhhhhhhcceeEEEecCCCCHHHHHHHHHHcCCC------CHHHHHHHHHHcCCCHHHH
Confidence 4 33333344579999999999999988765421 1366788899999988544
No 51
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=98.44 E-value=8.4e-07 Score=83.60 Aligned_cols=176 Identities=17% Similarity=0.193 Sum_probs=100.0
Q ss_pred CCCcccccchHHHHHHHHHHh---cC---------CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc
Q 005747 126 NKDYEAFESRMSILNEITDAL---KN---------GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ 193 (679)
Q Consensus 126 ~~~~~~~~gr~~~~~~l~~~L---~~---------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~ 193 (679)
.....+++|-++.+++|.+.+ .. ...+-|.++|++|+|||++|+.+++..... .+.++.++
T Consensus 5 ~~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~-----~~~i~~~~-- 77 (247)
T d1ixza_ 5 KVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVP-----FITASGSD-- 77 (247)
T ss_dssp SCCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCC-----EEEEEHHH--
T ss_pred CCcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCC-----EEEEEhHH--
Confidence 344567888887776655533 21 224678999999999999999999876432 34444322
Q ss_pred CHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc----------------chhhcCCCCC--CC
Q 005747 194 DIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL----------------DLKAAGIPHG--DD 255 (679)
Q Consensus 194 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~----------------~~~~l~~~~~--~~ 255 (679)
+.. .... .....+..+.+......+.+|++||++... .+..+...+. ..
T Consensus 78 ----l~~--------~~~g-~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~ 144 (247)
T d1ixza_ 78 ----FVE--------MFVG-VGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK 144 (247)
T ss_dssp ----HHH--------SCTT-HHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT
T ss_pred ----hhh--------cccc-HHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC
Confidence 111 0111 111233445555555678999999974210 0111111110 11
Q ss_pred CCCcEEEEeecCcchhcccC----CCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCCh
Q 005747 256 HRGCKVLLTARSLDTLSTKM----DSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLP 323 (679)
Q Consensus 256 ~~gs~iivTtR~~~v~~~~~----~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glP 323 (679)
..+.-||-||...+-+...+ .-.+.+++.+.+.++..++|+.+........+ .....+++.|.|+.
T Consensus 145 ~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~--~~~~~la~~t~g~s 214 (247)
T d1ixza_ 145 DTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAED--VDLALLAKRTPGFV 214 (247)
T ss_dssp TCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTT--CCHHHHHHTCTTCC
T ss_pred CCCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccc--cCHHHHHHHCCCCC
Confidence 22333344676544433222 23568999999999999999988864322221 11345677788864
No 52
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=98.37 E-value=2.2e-06 Score=80.92 Aligned_cols=174 Identities=17% Similarity=0.188 Sum_probs=102.6
Q ss_pred cccccchHHHHHHHHHHh---c---------CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHH
Q 005747 129 YEAFESRMSILNEITDAL---K---------NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIR 196 (679)
Q Consensus 129 ~~~~~gr~~~~~~l~~~L---~---------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~ 196 (679)
..+++|-++.+++|.+.+ . ....+.+.++|++|+|||++|+.+++..... .+.++.++-.+.
T Consensus 11 ~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~-----~~~i~~~~l~~~- 84 (256)
T d1lv7a_ 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP-----FFTISGSDFVEM- 84 (256)
T ss_dssp GGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCC-----EEEECSCSSTTS-
T ss_pred HHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCC-----EEEEEhHHhhhc-
Confidence 457778888777775543 2 1235678899999999999999999887532 344444432210
Q ss_pred HHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCc------------cc----hhhcCCCCC--CCCCC
Q 005747 197 KIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGN------------LD----LKAAGIPHG--DDHRG 258 (679)
Q Consensus 197 ~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~------------~~----~~~l~~~~~--~~~~g 258 (679)
..... ...+..+.+...+..+.+|++||++.. .. +..+...+. ....+
T Consensus 85 -------------~~g~~-~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~ 150 (256)
T d1lv7a_ 85 -------------FVGVG-ASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEG 150 (256)
T ss_dssp -------------CCCCC-HHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSC
T ss_pred -------------chhHH-HHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 11111 233445555555677899999998421 01 111111111 12234
Q ss_pred cEEEEeecCcchhcccC----CCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChH
Q 005747 259 CKVLLTARSLDTLSTKM----DSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPV 324 (679)
Q Consensus 259 s~iivTtR~~~v~~~~~----~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPl 324 (679)
--||-||...+.+.... .-.+.+.+...+.++-.++|+.+........+ .....+++.+.|+.-
T Consensus 151 v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~--~~~~~la~~t~G~s~ 218 (256)
T d1lv7a_ 151 IIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSG 218 (256)
T ss_dssp EEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTT--CCHHHHHHTCTTCCH
T ss_pred EEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcc--cCHHHHHHhCCCCCH
Confidence 44555777644443222 23578999999999999999988764332221 123557778888653
No 53
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=98.37 E-value=8.6e-06 Score=76.51 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=100.7
Q ss_pred CCcccccchHHHHHHHHHHhc-----CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHH
Q 005747 127 KDYEAFESRMSILNEITDALK-----NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQRE 201 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~-----~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~ 201 (679)
....+++|.++.++++..++. ....+-+.++|++|+||||+|+.+++..... ..+++.+...........
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~-----~~~~~~~~~~~~~~~~~~ 80 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN-----LRVTSGPAIEKPGDLAAI 80 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHhCCC-----eEeccCCccccchhhHHH
Confidence 345678999999998888875 2345667899999999999999999876532 344554444333322222
Q ss_pred HHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCccc---------hhh----cCCCC-------CCCCCCcEE
Q 005747 202 IADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNLD---------LKA----AGIPH-------GDDHRGCKV 261 (679)
Q Consensus 202 i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~~---------~~~----l~~~~-------~~~~~gs~i 261 (679)
+.+.+ +.+.++++|++..... .+. ..... ....+...+
T Consensus 81 ~~~~~----------------------~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (239)
T d1ixsb2 81 LANSL----------------------EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTL 138 (239)
T ss_dssp HHTTC----------------------CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEE
T ss_pred HHhhc----------------------cCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEE
Confidence 21111 2234555566543210 000 00000 001123344
Q ss_pred EEeecC-cchh-cccCCCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChHHHHHHH
Q 005747 262 LLTARS-LDTL-STKMDSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPVAIVTVA 330 (679)
Q Consensus 262 ivTtR~-~~v~-~~~~~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPlai~~~~ 330 (679)
+.+|-+ .... .........+.+...+.++..++....+....... ..+....|++.+.|.+-.+..+.
T Consensus 139 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~~~l~~ia~~s~gd~R~a~~~l 208 (239)
T d1ixsb2 139 IGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRI-TEEAALEIGRRSRGTMRVAKRLF 208 (239)
T ss_dssp EEEESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCB-CHHHHHHHHHHTTSSHHHHHHHH
T ss_pred EeeccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCcc-chHHHHHHHHHcCCCHHHHHHHH
Confidence 444433 2211 22233456888999999999988887765332222 25678899999999876554333
No 54
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.34 E-value=8.9e-07 Score=78.80 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=88.5
Q ss_pred cccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEE-EEcCCCcCHHHHHHHHHHH
Q 005747 131 AFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVF-SEVSESQDIRKIQREIADK 205 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~w-v~v~~~~~~~~l~~~i~~~ 205 (679)
..+||+++++++++.|......-+.++|.+|+|||+++..++.+....+ .-+..+| ++++. +..
T Consensus 23 ~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~------LiA----- 91 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA------LVA----- 91 (195)
T ss_dssp CCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHH------HHT-----
T ss_pred CCcCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHH------Hhc-----
Confidence 4579999999999999876667788999999999999999998754322 1234444 33221 110
Q ss_pred hCCCCCccchhHHHHHHHHHHH-cCCceEEEEecCCCccc---------hhhcCCCCCCCCCCcEEEEeecCcchhcc--
Q 005747 206 LGLKFDEESESGRARRLHDRLK-KEKRILVILDNIWGNLD---------LKAAGIPHGDDHRGCKVLLTARSLDTLST-- 273 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~-~~k~~LlVlDdv~~~~~---------~~~l~~~~~~~~~gs~iivTtR~~~v~~~-- 273 (679)
|.. ....-.+....+.+.+. ...+.+|++|++..... ...+..|... ...-++|.||..++....
T Consensus 92 -g~~-~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~-rg~l~~IgatT~eey~~~~e 168 (195)
T d1jbka_ 92 -GAK-YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA-RGELHCVGATTLDEYRQYIE 168 (195)
T ss_dssp -TTC-SHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHH-TTSCCEEEEECHHHHHHHTT
T ss_pred -cCC-ccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHh-CCCceEEecCCHHHHHHHHH
Confidence 000 00011233444555543 34579999999854311 1111111111 234568888876543211
Q ss_pred ----cCCCcceEEecCCChHHHHHH
Q 005747 274 ----KMDSQKNFSVSFLKEEEAWSL 294 (679)
Q Consensus 274 ----~~~~~~~~~l~~L~~~e~~~L 294 (679)
.......+.+++.+.+++..+
T Consensus 169 ~d~aL~rrF~~I~V~Ep~~e~t~~I 193 (195)
T d1jbka_ 169 KDAALERRFQKVFVAEPSVEDTIAI 193 (195)
T ss_dssp TCHHHHTTEEEEECCCCCHHHHHTT
T ss_pred cCHHHHhcCCEeecCCCCHHHHHHH
Confidence 112346888888888887654
No 55
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.29 E-value=4.6e-06 Score=79.19 Aligned_cols=173 Identities=13% Similarity=0.170 Sum_probs=101.4
Q ss_pred ccccchHHHHHHHHHHh----cC---------CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHH
Q 005747 130 EAFESRMSILNEITDAL----KN---------GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIR 196 (679)
Q Consensus 130 ~~~~gr~~~~~~l~~~L----~~---------~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~ 196 (679)
..+.|-++.+++|.+.+ .. ...+-+.++|++|+|||++|+++++..... .+.++.+.
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~-----~~~i~~~~----- 73 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF-----FFLINGPE----- 73 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCE-----EEEECHHH-----
T ss_pred hhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCe-----EEEEEchh-----
Confidence 45678777777777653 21 235678999999999999999999976532 23333221
Q ss_pred HHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCcc---------c----hhhcCC--CCCCCCCCcEE
Q 005747 197 KIQREIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGNL---------D----LKAAGI--PHGDDHRGCKV 261 (679)
Q Consensus 197 ~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~~---------~----~~~l~~--~~~~~~~gs~i 261 (679)
+....... .......+.+.....++.+|++||+.... . ...+.. .......+.-|
T Consensus 74 ---------l~~~~~g~-~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 143 (258)
T d1e32a2 74 ---------IMSKLAGE-SESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 143 (258)
T ss_dssp ---------HTTSCTTH-HHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred ---------hccccccc-HHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccE
Confidence 11111111 11223344444445678999999986431 0 011110 01122334455
Q ss_pred EEeecCcchhcccC----CCcceEEecCCChHHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCChH
Q 005747 262 LLTARSLDTLSTKM----DSQKNFSVSFLKEEEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLPV 324 (679)
Q Consensus 262 ivTtR~~~v~~~~~----~~~~~~~l~~L~~~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glPl 324 (679)
|.||....-+.... .-.+.+++...+.++-.++|...........+. ...+|++.+.|+--
T Consensus 144 i~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~--~~~~la~~t~G~s~ 208 (258)
T d1e32a2 144 MAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDV--DLEQVANETHGHVG 208 (258)
T ss_dssp EEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTC--CHHHHHHHCTTCCH
T ss_pred EEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCccccccc--chhhhhhcccCCCH
Confidence 66887655443222 245799999999999999999877643222221 13578889988643
No 56
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17 E-value=3.4e-08 Score=87.28 Aligned_cols=88 Identities=22% Similarity=0.198 Sum_probs=53.6
Q ss_pred cCCCCCcEEEcccccccccc---hhhhcCcCCCEEeccCCcCccccChhhhcCCcccceeecCCCCCCcchhhhcccccc
Q 005747 482 RDLKKLEVLCLRGSDIKRLP---VEVGELTLLRLLDLRDCRELEIIPPNVLSKLSHLEELYMGPRSFDKWEVEVEGVKNA 558 (679)
Q Consensus 482 ~~l~~L~~L~L~~n~i~~lp---~~i~~l~~L~~L~l~~n~~~~~lp~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~ 558 (679)
..+++|++|+|++|+|+.++ ..+..+++|+.|+|++|. +..++.-.+....+|+.|++++|.+.........-...
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 46788888888888877653 345678888888888877 55555422334556888888888774321100001112
Q ss_pred cccccCCCcEEE
Q 005747 559 SLHELKHLISLE 570 (679)
Q Consensus 559 ~l~~l~~L~~L~ 570 (679)
.+..+++|+.||
T Consensus 141 i~~~~P~L~~LD 152 (162)
T d1koha1 141 IRERFPKLLRLD 152 (162)
T ss_dssp HHTTSTTCCEET
T ss_pred HHHHCCCCCEEC
Confidence 245567777665
No 57
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.15 E-value=9.9e-06 Score=80.88 Aligned_cols=155 Identities=13% Similarity=0.146 Sum_probs=89.0
Q ss_pred cccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEE-EEcCCCcCHHHHHHHHHHH
Q 005747 131 AFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVF-SEVSESQDIRKIQREIADK 205 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~w-v~v~~~~~~~~l~~~i~~~ 205 (679)
.++||+++++++++.|....-.-+.++|.+|||||+++..++.+....+ ..+.++| ++++.-..
T Consensus 23 ~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a----------- 91 (387)
T d1qvra2 23 PVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA----------- 91 (387)
T ss_dssp CCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC----------------
T ss_pred CCcCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhc-----------
Confidence 4679999999999999865555667899999999999988877643322 2344444 44433110
Q ss_pred hCCCCCccchhHHHHHHHHHHHcC-CceEEEEecCCCccc---------hhhcCCCCCCCCCCcEEEEeecCcchhcc--
Q 005747 206 LGLKFDEESESGRARRLHDRLKKE-KRILVILDNIWGNLD---------LKAAGIPHGDDHRGCKVLLTARSLDTLST-- 273 (679)
Q Consensus 206 l~~~~~~~~~~~~~~~l~~~l~~~-k~~LlVlDdv~~~~~---------~~~l~~~~~~~~~gs~iivTtR~~~v~~~-- 273 (679)
|... ...-......+...+... .+++|++|++..... ...+..|.. ....-++|-+|..++....
T Consensus 92 -g~~~-~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L-~rg~~~~I~~tT~~ey~~~e~ 168 (387)
T d1qvra2 92 -GAKY-RGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPAL-ARGELRLIGATTLDEYREIEK 168 (387)
T ss_dssp --------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHH-HTTCCCEEEEECHHHHHHHTT
T ss_pred -ccCc-chhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHH-hCCCcceeeecCHHHHHHhcc
Confidence 0000 011223444555555433 479999999865421 111111111 1233468888776444211
Q ss_pred ---cCCCcceEEecCCChHHHHHHHHHHh
Q 005747 274 ---KMDSQKNFSVSFLKEEEAWSLFKKMA 299 (679)
Q Consensus 274 ---~~~~~~~~~l~~L~~~e~~~Lf~~~~ 299 (679)
.......+.+.+.+.+++..++....
T Consensus 169 d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 169 DPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp CTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred cHHHHHhcccccCCCCcHHHHHHHHHHHH
Confidence 11234689999999999999987654
No 58
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=2.9e-08 Score=87.70 Aligned_cols=119 Identities=19% Similarity=0.098 Sum_probs=78.5
Q ss_pred CCCEEEcCCCCCCCchhhcCCCCCcEEEcccccccccchhhhcCcCCCEEeccCCcCccccCh--hhhcCCcccceeecC
Q 005747 464 NLQTLSLYNCKLLDITVIRDLKKLEVLCLRGSDIKRLPVEVGELTLLRLLDLRDCRELEIIPP--NVLSKLSHLEELYMG 541 (679)
Q Consensus 464 ~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~i~~lp~~i~~l~~L~~L~l~~n~~~~~lp~--~~~~~l~~L~~L~l~ 541 (679)
..+.|+++++. ..+.+..+..+..|+...+....++.....+++|++|+|++|+ ++.++. ..+..+++|+.|+++
T Consensus 23 ~~~~Ldls~l~--~~~~l~~~~~~~~l~~~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~l~~~~~~~~~l~~L~~L~Ls 99 (162)
T d1koha1 23 SQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNR-LYRLDDMSSIVQKAPNLKILNLS 99 (162)
T ss_dssp SSCCBCCCCCS--SCTTTTTTTCCCCTTSHHHHHHHHHHHHHHCTTCCCCCCCSSC-CCCCSGGGTHHHHSTTCCCCCCT
T ss_pred hhCeeecccCC--CCchhhhccchhhcchhhhHhhhhHHHHHhCCCCCEeeCCCcc-ccCCchhHHHHhhCCcccccccc
Confidence 35556665544 2334445555555666666555555555689999999999998 454442 336789999999999
Q ss_pred CCCCCcchhhhcccccccccccCCCcEEEEEeecCCCCCCc--------c-cccccceeE
Q 005747 542 PRSFDKWEVEVEGVKNASLHELKHLISLELQIQDVNTLPRG--------L-FLEKLERYK 592 (679)
Q Consensus 542 ~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~lp~~--------~-~l~~L~~L~ 592 (679)
+|.+..++. -.+.+..+|+.|++++|++...... . .+++|+.|+
T Consensus 100 ~N~i~~l~~-------l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 100 GNELKSERE-------LDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp TSCCCCGGG-------HHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cCccccchh-------hhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 999965432 1223345789999999999854432 1 467777664
No 59
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.09 E-value=4.5e-06 Score=79.53 Aligned_cols=151 Identities=13% Similarity=0.180 Sum_probs=85.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEK 230 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k 230 (679)
.+-|.++|++|.|||++|++++...... .+.++. .++. + .... ........+........
T Consensus 41 ~~giLL~Gp~GtGKT~l~~ala~~~~~~-----~~~~~~------~~l~-------~-~~~~-~~~~~l~~~f~~A~~~~ 100 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKG------PELL-------T-MWFG-ESEANVREIFDKARQAA 100 (265)
T ss_dssp CCEEEEBCCTTSSHHHHHHHHHHHTTCE-----EEEECH------HHHH-------T-SCTT-THHHHHHHHHHHHHHTC
T ss_pred CCeEEEECCCCCcchhHHHHHHHHhCCc-----EEEEEH------HHhh-------h-cccc-chHHHHHHHHHHHHhcC
Confidence 4678899999999999999999987542 222221 1110 0 1111 11233444444444567
Q ss_pred ceEEEEecCCCcc--------c--------hhhcCCCCCC--CCCCcEEEEeecCcchhcccC----CCcceEEecCCCh
Q 005747 231 RILVILDNIWGNL--------D--------LKAAGIPHGD--DHRGCKVLLTARSLDTLSTKM----DSQKNFSVSFLKE 288 (679)
Q Consensus 231 ~~LlVlDdv~~~~--------~--------~~~l~~~~~~--~~~gs~iivTtR~~~v~~~~~----~~~~~~~l~~L~~ 288 (679)
+.+|++||++... . ...+...+.. ...+--||.||...+-+.... .....++++..+.
T Consensus 101 p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~ 180 (265)
T d1r7ra3 101 PCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 180 (265)
T ss_dssp SEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCC
T ss_pred CcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHH
Confidence 8999999986321 0 1112112211 223445666777654442222 2456899999999
Q ss_pred HHHHHHHHHHhCCCCCCccHHHHHHHHHHHcCCCh
Q 005747 289 EEAWSLFKKMAGDYVEGNELKEVARDVAKECAGLP 323 (679)
Q Consensus 289 ~e~~~Lf~~~~~~~~~~~~~~~~~~~I~~~~~glP 323 (679)
++-.++|+..........+ ....++++++.|+.
T Consensus 181 ~~R~~il~~~l~~~~~~~~--~~l~~la~~t~g~s 213 (265)
T d1r7ra3 181 KSRVAILKANLRKSPVAKD--VDLEFLAKMTNGFS 213 (265)
T ss_dssp HHHHHHHHHHTTCC----C--CCCHHHHHHHCSSC
T ss_pred HHHHHHHHHHhccCCchhh--hhHHHHHhcCCCCC
Confidence 9999999887764322111 11355777888765
No 60
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.01 E-value=2.1e-05 Score=71.96 Aligned_cols=130 Identities=16% Similarity=0.213 Sum_probs=78.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKR 231 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~ 231 (679)
..+.|||++|+|||.|++++++....+ ...++|++.. ++...+.+.+.. .......+.+. .-
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~--------~~~~~~~~~~~--~~ 98 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNEAKKR--GYRVIYSSAD------DFAQAMVEHLKK--------GTINEFRNMYK--SV 98 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHT--TCCEEEEEHH------HHHHHHHHHHHH--------TCHHHHHHHHH--TC
T ss_pred CcEEEECCCCCcHHHHHHHHHHHhccC--ccceEEechH------HHHHHHHHHHHc--------cchhhHHHHHh--hc
Confidence 448899999999999999999997654 3456666443 344444433321 11223334444 34
Q ss_pred eEEEEecCCCc---cchhhc-CCCCCC-CCCCcEEEEeecCcchh--------cccCCCcceEEecCCChHHHHHHHHHH
Q 005747 232 ILVILDNIWGN---LDLKAA-GIPHGD-DHRGCKVLLTARSLDTL--------STKMDSQKNFSVSFLKEEEAWSLFKKM 298 (679)
Q Consensus 232 ~LlVlDdv~~~---~~~~~l-~~~~~~-~~~gs~iivTtR~~~v~--------~~~~~~~~~~~l~~L~~~e~~~Lf~~~ 298 (679)
-+|++||+... ..|+.. ...+.. ...|.+||+||+..... ........+++++ +++++..++++++
T Consensus 99 dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~ 177 (213)
T d1l8qa2 99 DLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEK 177 (213)
T ss_dssp SEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHH
T ss_pred cchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHHH
Confidence 79999999643 334432 111111 23577899999963321 1123345677885 5777777888777
Q ss_pred hC
Q 005747 299 AG 300 (679)
Q Consensus 299 ~~ 300 (679)
+.
T Consensus 178 a~ 179 (213)
T d1l8qa2 178 LK 179 (213)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 61
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.84 E-value=3.1e-05 Score=72.51 Aligned_cols=91 Identities=18% Similarity=0.190 Sum_probs=52.6
Q ss_pred cccchHHHHHHHHHHhc----------CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHH
Q 005747 131 AFESRMSILNEITDALK----------NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQR 200 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~----------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~ 200 (679)
+++|..+.++.+++-.. ....+-|.++|++|+|||++|+.+++..... | +.++.+....
T Consensus 10 ~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~--~---~~i~~~~~~~------ 78 (246)
T d1d2na_ 10 GIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFP--F---IKICSPDKMI------ 78 (246)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCS--E---EEEECGGGCT------
T ss_pred CCcCcCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhccccc--c---cccccccccc------
Confidence 45665555555444332 2235668899999999999999999886532 2 3333322110
Q ss_pred HHHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCC
Q 005747 201 EIADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIW 240 (679)
Q Consensus 201 ~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~ 240 (679)
..........+..+.+...+..+.+|++|+++
T Consensus 79 --------g~~~~~~~~~i~~if~~A~~~~p~il~iDEid 110 (246)
T d1d2na_ 79 --------GFSETAKCQAMKKIFDDAYKSQLSCVVVDDIE 110 (246)
T ss_dssp --------TCCHHHHHHHHHHHHHHHHTSSEEEEEECCHH
T ss_pred --------cccccchhhhhhhhhhhhhhcccceeehhhhh
Confidence 00011111223344445555668999999984
No 62
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.83 E-value=7.8e-06 Score=71.97 Aligned_cols=93 Identities=14% Similarity=0.087 Sum_probs=40.4
Q ss_pred hcCCCCCcEEEccccccc-----ccchhhhcCcCCCEEeccCCcCccccChh---hhcCCcccceeecCCCCCCcchhhh
Q 005747 481 IRDLKKLEVLCLRGSDIK-----RLPVEVGELTLLRLLDLRDCRELEIIPPN---VLSKLSHLEELYMGPRSFDKWEVEV 552 (679)
Q Consensus 481 ~~~l~~L~~L~L~~n~i~-----~lp~~i~~l~~L~~L~l~~n~~~~~lp~~---~~~~l~~L~~L~l~~n~~~~~~~~~ 552 (679)
+...++|++|+|++|.+. .+...+...+.|+.|+|++|.+...-... .+..-++|++|++++|.+..+....
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~ 119 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 119 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHH
Confidence 344455555555555544 12233444555566666555422211110 1334455666666655443221111
Q ss_pred cccccccccccCCCcEEEEEe
Q 005747 553 EGVKNASLHELKHLISLELQI 573 (679)
Q Consensus 553 ~~~~~~~l~~l~~L~~L~l~~ 573 (679)
...+...+...++|+.|+++.
T Consensus 120 ~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 120 EMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HHHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHHhCCCccEeeCcC
Confidence 112233344445555555543
No 63
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.55 E-value=4.4e-05 Score=66.97 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=77.4
Q ss_pred CceEEEEeecc-cCCC-----CCccccCCCCCCEEEcCCCCCCC--c----hhhcCCCCCcEEEcccccccc-----cch
Q 005747 440 EQVRVINVSYM-NLLS-----LPSSLGLLSNLQTLSLYNCKLLD--I----TVIRDLKKLEVLCLRGSDIKR-----LPV 502 (679)
Q Consensus 440 ~~L~~L~l~~n-~l~~-----lp~~~~~l~~L~~L~L~~n~l~~--~----~~~~~l~~L~~L~L~~n~i~~-----lp~ 502 (679)
++|+.|+|+++ .++. +-..+...++|+.|+|++|.+.+ . ..+...+.|++|+|++|.|+. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 68999999974 4541 33357788899999999999876 2 346677899999999999873 444
Q ss_pred hhhcCcCCCEEeccCCcCccccCh-------hhhcCCcccceeecCCCC
Q 005747 503 EVGELTLLRLLDLRDCRELEIIPP-------NVLSKLSHLEELYMGPRS 544 (679)
Q Consensus 503 ~i~~l~~L~~L~l~~n~~~~~lp~-------~~~~~l~~L~~L~l~~n~ 544 (679)
.+...++|++|++++|.. ..+.. ..+..-++|+.|+++.+.
T Consensus 95 aL~~n~sL~~L~l~~n~~-~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQ-SVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HTTTTCCCSEEECCCCSS-CCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhCCcCCEEECCCCcC-CCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 667788999999998752 22221 124556889999997754
No 64
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.47 E-value=0.00035 Score=62.64 Aligned_cols=130 Identities=17% Similarity=0.077 Sum_probs=78.6
Q ss_pred HHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccC--CCCCeEEEEEcCC-CcCHHHHHHHHHHHhCCCCCccch
Q 005747 139 LNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAEND--KLFDQVVFSEVSE-SQDIRKIQREIADKLGLKFDEESE 215 (679)
Q Consensus 139 ~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~--~~F~~~~wv~v~~-~~~~~~l~~~i~~~l~~~~~~~~~ 215 (679)
++.+..++..+..+.+.++|.+|+||||+|..+.+..... .|.| +.++.... ...++++- ++.+.+.....
T Consensus 3 ~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D-~~~i~~~~~~I~Id~IR-~i~~~~~~~~~---- 76 (198)
T d2gnoa2 3 LETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASD-VLEIDPEGENIGIDDIR-TIKDFLNYSPE---- 76 (198)
T ss_dssp HHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTT-EEEECCSSSCBCHHHHH-HHHHHHTSCCS----
T ss_pred HHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCC-EEEEeCCcCCCCHHHHH-HHHHHHhhCcc----
Confidence 4556666667788999999999999999999999865432 2233 45554332 23444443 35554443221
Q ss_pred hHHHHHHHHHHHcCCceEEEEecCCCc--cchhhcCCCCCCCCCCcEEEEeecCcc-hhcccCCCcceEEecCC
Q 005747 216 SGRARRLHDRLKKEKRILVILDNIWGN--LDLKAAGIPHGDDHRGCKVLLTARSLD-TLSTKMDSQKNFSVSFL 286 (679)
Q Consensus 216 ~~~~~~l~~~l~~~k~~LlVlDdv~~~--~~~~~l~~~~~~~~~gs~iivTtR~~~-v~~~~~~~~~~~~l~~L 286 (679)
.+++-++|+|++... .....+...+.....++.+|++|.+.. +...-......+.+.+.
T Consensus 77 ------------~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p 138 (198)
T d2gnoa2 77 ------------LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVP 138 (198)
T ss_dssp ------------SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred ------------cCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCc
Confidence 145569999998765 344455444444445777777777644 33333334456676644
No 65
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.11 E-value=0.0002 Score=62.53 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=54.1
Q ss_pred CCCCCCEEEcCCC-CCCC--c----hhhcCCCCCcEEEccccccc-----ccchhhhcCcCCCEEeccCCcCccccCh--
Q 005747 461 LLSNLQTLSLYNC-KLLD--I----TVIRDLKKLEVLCLRGSDIK-----RLPVEVGELTLLRLLDLRDCRELEIIPP-- 526 (679)
Q Consensus 461 ~l~~L~~L~L~~n-~l~~--~----~~~~~l~~L~~L~L~~n~i~-----~lp~~i~~l~~L~~L~l~~n~~~~~lp~-- 526 (679)
+.+.|+.|+|+++ .++. . ..+...++|++|+|++|.++ .+-..+...++|+.|++++|.....--.
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 4456666666653 3433 1 23445566666666666554 2233445556666666666653222111
Q ss_pred -hhhcCCcccceeecC--CCCCCcchhhhcccccccccccCCCcEEEEEee
Q 005747 527 -NVLSKLSHLEELYMG--PRSFDKWEVEVEGVKNASLHELKHLISLELQIQ 574 (679)
Q Consensus 527 -~~~~~l~~L~~L~l~--~n~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n 574 (679)
..+...++|+.++|+ +|.+.... ...+...+...++|+.|+++.+
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~---~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNV---EMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHH---HHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHH---HHHHHHHHHhCCCcCEEeCcCC
Confidence 113445666654443 33342110 1123334455566666666544
No 66
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.00 E-value=0.00033 Score=61.04 Aligned_cols=105 Identities=16% Similarity=0.098 Sum_probs=76.9
Q ss_pred CceEEEEeec-ccCC-----CCCccccCCCCCCEEEcCCCCCCC--c----hhhcCCCCCcEEEccccccc-----ccch
Q 005747 440 EQVRVINVSY-MNLL-----SLPSSLGLLSNLQTLSLYNCKLLD--I----TVIRDLKKLEVLCLRGSDIK-----RLPV 502 (679)
Q Consensus 440 ~~L~~L~l~~-n~l~-----~lp~~~~~l~~L~~L~L~~n~l~~--~----~~~~~l~~L~~L~L~~n~i~-----~lp~ 502 (679)
++|+.|++++ +.++ .+-..+...++|+.|+|++|.++. . ..+...++|+.|++++|.++ .+..
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 6899999997 4565 234456788999999999999876 1 44667899999999999876 3456
Q ss_pred hhhcCcCCCEEecc--CCcCcc----ccChhhhcCCcccceeecCCCCC
Q 005747 503 EVGELTLLRLLDLR--DCRELE----IIPPNVLSKLSHLEELYMGPRSF 545 (679)
Q Consensus 503 ~i~~l~~L~~L~l~--~n~~~~----~lp~~~~~~l~~L~~L~l~~n~~ 545 (679)
.+...++|+.++|+ +|.+.. .+... +...++|++|+++.+..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~-L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANM-LEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHH-HHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHH-HHhCCCcCEEeCcCCCC
Confidence 67888999987665 444221 12222 56789999999987654
No 67
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.86 E-value=0.0028 Score=59.08 Aligned_cols=84 Identities=25% Similarity=0.301 Sum_probs=59.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCc-----cchhHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDE-----ESESGRARRLHDR 225 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~-----~~~~~~~~~l~~~ 225 (679)
-+++-|+|..|+||||+|.+++...... -..++|++....++.+. ++++|...+. ....+.+-.+.+.
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~~q~~--g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~~~~~~ 132 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVANAQAA--GGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQALEIADM 132 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHHHHHT--TCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHHHHHHH
T ss_pred ceeEEEecCCCcHHHHHHHHHHHHHhcC--CCEEEEEECCccCCHHH-----HHHhCCCHHHeEEecCCCHHHHHHHHHH
Confidence 5799999999999999998888776554 34689999999998765 5667776443 1222333334444
Q ss_pred HH-cCCceEEEEecCCC
Q 005747 226 LK-KEKRILVILDNIWG 241 (679)
Q Consensus 226 l~-~~k~~LlVlDdv~~ 241 (679)
+. .++.-|||+|.+..
T Consensus 133 l~~~~~~~liIiDSi~a 149 (269)
T d1mo6a1 133 LIRSGALDIVVIDSVAA 149 (269)
T ss_dssp HHHTTCEEEEEEECSTT
T ss_pred HHhcCCCCEEEEecccc
Confidence 43 45677999998843
No 68
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.76 E-value=0.00084 Score=64.87 Aligned_cols=105 Identities=16% Similarity=0.272 Sum_probs=57.3
Q ss_pred cccchHHHHHHHHHHhc-------CC--CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHH
Q 005747 131 AFESRMSILNEITDALK-------NG--DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQRE 201 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~-------~~--~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~ 201 (679)
.++|.++.++.+...+. +. ...++.++|+.|+|||.+|+.+++..-.. -...+-++.+.-.+...+.+-
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~~~L 101 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAVSRL 101 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGGGGC
T ss_pred eEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCC--CcceEEEeccccccchhhhhh
Confidence 34688888887766553 11 23478899999999999999999986321 122344555443322211110
Q ss_pred HHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCc
Q 005747 202 IADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGN 242 (679)
Q Consensus 202 i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~ 242 (679)
+|.+... ........+.+.+.+....+++||++...
T Consensus 102 ----~g~~~gy-vG~~~~~~l~~~~~~~p~~Vvl~DEieK~ 137 (315)
T d1qvra3 102 ----IGAPPGY-VGYEEGGQLTEAVRRRPYSVILFDEIEKA 137 (315)
T ss_dssp -------------------CHHHHHHHCSSEEEEESSGGGS
T ss_pred ----cCCCCCC-cCcccCChHHHHHHhCCCcEEEEehHhhc
Confidence 1111100 00011123555565556789999999754
No 69
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.69 E-value=0.0035 Score=58.48 Aligned_cols=84 Identities=25% Similarity=0.303 Sum_probs=59.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCc-----cchhHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDE-----ESESGRARRLHDR 225 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~-----~~~~~~~~~l~~~ 225 (679)
-+++-|+|.+|.||||+|.+++....... ..++|++....++.+ +++++|...+. ....+..-.+.+.
T Consensus 57 g~itei~G~~~sGKT~l~l~~~~~aqk~g--~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~ 129 (268)
T d1xp8a1 57 GRITEIYGPESGGKTTLALAIVAQAQKAG--GTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQALEIMEL 129 (268)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHHHH
T ss_pred ceEEEEecCCccchHHHHHHHHHHHHhCC--CEEEEEECCccCCHH-----HHHHhCCCchhEEEEcCCCHHHHHHHHHH
Confidence 46999999999999999999988765432 458999999999885 67788876543 1222223334444
Q ss_pred HH-cCCceEEEEecCCC
Q 005747 226 LK-KEKRILVILDNIWG 241 (679)
Q Consensus 226 l~-~~k~~LlVlDdv~~ 241 (679)
+. .+..-|||+|-+..
T Consensus 130 l~~~~~~~liIiDSi~a 146 (268)
T d1xp8a1 130 LVRSGAIDVVVVDSVAA 146 (268)
T ss_dssp HHTTTCCSEEEEECTTT
T ss_pred HHhcCCCcEEEEecccc
Confidence 43 34567999998743
No 70
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.63 E-value=0.0058 Score=54.44 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=44.8
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCC-cCHHHHHHHHHHHhCCCC
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSES-QDIRKIQREIADKLGLKF 210 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~-~~~~~l~~~i~~~l~~~~ 210 (679)
++.++|.++|+.|+||||.+..++......+ ..+..|+.... ....+-++..++.++.+.
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~ 64 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLG--KKVMFCAGDTFRAAGGTQLSEWGKRLSIPV 64 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTT--CCEEEECCCCSSTTHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEEeccccccchhhHhhcccccCceE
Confidence 4568999999999999998877777765432 45777776653 355677778888888764
No 71
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.62 E-value=0.0069 Score=53.99 Aligned_cols=61 Identities=16% Similarity=0.231 Sum_probs=41.8
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCH--HHHHHHHHHHhCCCCC
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDI--RKIQREIADKLGLKFD 211 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~--~~l~~~i~~~l~~~~~ 211 (679)
.....||.++|+.|+||||-+..++......+ ..+..+ ..+.+.+ .+-++..++.++.+..
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~li-t~Dt~R~gA~eQL~~~a~~l~v~~~ 68 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQG--KSVMLA-AGDTFRAAAVEQLQVWGQRNNIPVI 68 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHHTTT--CCEEEE-CCCTTCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEE-ecccccccchhhhhhhhhhcCCccc
Confidence 34568999999999999998777777765332 234444 4455544 5556777888887753
No 72
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.56 E-value=0.00059 Score=59.36 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=24.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
.+|++|+|..|+|||||++++.+....+
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHC
Confidence 4799999999999999999999876543
No 73
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.56 E-value=0.0019 Score=62.39 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=59.2
Q ss_pred cccchHHHHHHHHHHhc---------CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHH
Q 005747 131 AFESRMSILNEITDALK---------NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQRE 201 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~---------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~ 201 (679)
.++|.++.++.+...+. +....++.++|+.|+|||.||+.+++-.. ...+-++++.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~-----~~~i~~d~s~~~~~~~---- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-----IELLRFDMSEYMERHT---- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHT-----CEEEEEEGGGCSSSSC----
T ss_pred eecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhcc-----CCeeEeccccccchhh----
Confidence 45688888888877663 22345889999999999999999998753 3345555543221110
Q ss_pred HHHHhCCCCCccchhHHHHHHHHHHHcCCceEEEEecCCCc
Q 005747 202 IADKLGLKFDEESESGRARRLHDRLKKEKRILVILDNIWGN 242 (679)
Q Consensus 202 i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~~LlVlDdv~~~ 242 (679)
+.+-+|.+.. .........+...+.+....+++||++...
T Consensus 94 ~~~l~g~~~g-y~g~~~~~~l~~~~~~~~~~vvl~DeieKa 133 (315)
T d1r6bx3 94 VSRLIGAPPG-YVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 133 (315)
T ss_dssp CSSSCCCCSC-SHHHHHTTHHHHHHHHCSSEEEEEETGGGS
T ss_pred hhhhcccCCC-ccccccCChhhHHHHhCccchhhhcccccc
Confidence 0001111111 111111123444455456789999999765
No 74
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.55 E-value=0.00051 Score=59.38 Aligned_cols=25 Identities=24% Similarity=0.465 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.|.+.|++|+||||+|+.+++...
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~ 27 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLN 27 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhC
Confidence 5688999999999999999999864
No 75
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.52 E-value=0.00094 Score=58.64 Aligned_cols=38 Identities=16% Similarity=0.049 Sum_probs=29.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEE
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSE 188 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 188 (679)
+..+|.++|++|+||||+|+.++...... +++...++.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~-~~~~~~~~~ 42 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQ-GGRSVSLLL 42 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhc-CCCchhhhh
Confidence 34689999999999999999999987643 245555543
No 76
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.52 E-value=0.0056 Score=56.96 Aligned_cols=83 Identities=25% Similarity=0.336 Sum_probs=57.2
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCc-----cchhHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDE-----ESESGRARRLHDR 225 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~-----~~~~~~~~~l~~~ 225 (679)
-+++-|+|.+|+||||+|.+++...... -..++|++....++... ++.+|...+. ....+..-.+.+.
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~q~~--g~~~vyidtE~~~~~~~-----a~~~Gvd~d~v~~~~~~~~E~~~~~i~~ 126 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAAQRE--GKTCAFIDAEHALDPIY-----ARKLGVDIDNLLCSQPDTGEQALEICDA 126 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHT--TCCEEEEESSCCCCHHH-----HHHTTCCGGGCEEECCSSHHHHHHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHcC--CCEEEEEccccccCHHH-----HHHhCCCHHHEEEecCCCHHHHHHHHHH
Confidence 4699999999999999999999887644 34589999999888753 6677776432 1122222233344
Q ss_pred HH-cCCceEEEEecCC
Q 005747 226 LK-KEKRILVILDNIW 240 (679)
Q Consensus 226 l~-~~k~~LlVlDdv~ 240 (679)
+. .++.-|||+|-+.
T Consensus 127 l~~~~~~~liViDSi~ 142 (263)
T d1u94a1 127 LARSGAVDVIVVDSVA 142 (263)
T ss_dssp HHHHTCCSEEEEECGG
T ss_pred HHhcCCCCEEEEECcc
Confidence 43 3555688999874
No 77
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.49 E-value=0.007 Score=53.98 Aligned_cols=59 Identities=24% Similarity=0.297 Sum_probs=41.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc-CHHHHHHHHHHHhCCCC
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ-DIRKIQREIADKLGLKF 210 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~~ 210 (679)
+.+||.++|+.|+||||.+..++.....+ -..+..+++.... ...+-++..++.++.+.
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~ 68 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGK--GRRPLLVAADTQRPAAREQLRLLGEKVGVPV 68 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHT--TCCEEEEECCSSCHHHHHHHHHHHHHHTCCE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHC--CCcEEEEecccccchHHHHHHHHHHhcCCcc
Confidence 45799999999999999887777776543 2346666664332 34455667778888764
No 78
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.49 E-value=0.00066 Score=60.10 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=23.6
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+.|+|.|+.|+||||||+.+++...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~ 32 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFN 32 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 57899999999999999999998754
No 79
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.40 E-value=0.0015 Score=56.89 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=22.4
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
....+|.++|++|+||||+|+.....
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 45679999999999999999988654
No 80
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.31 E-value=0.011 Score=52.87 Aligned_cols=60 Identities=17% Similarity=0.250 Sum_probs=42.9
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc-CHHHHHHHHHHHhCCCC
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ-DIRKIQREIADKLGLKF 210 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~~ 210 (679)
....||.++|+.|+||||-+..++.....++ ..+..+++.... ...+-++..++.++.+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~ 69 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAAAIEQLKIWGERVGATV 69 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CceEEEeecccccchhHHHHHHhhhcCccc
Confidence 4567999999999999998777777765432 457777766433 34556677778888764
No 81
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.31 E-value=0.001 Score=56.60 Aligned_cols=24 Identities=29% Similarity=0.403 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
++|.|.|++|+||||+|+.+....
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 578999999999999999987653
No 82
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.31 E-value=0.0082 Score=55.28 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=33.0
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCC
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSES 192 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~ 192 (679)
.-+++.|+|.+|+|||++|.+++...... ...++|++....
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~~--~~~~~~is~e~~ 65 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACAN--KERAILFAYEES 65 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHTT--TCCEEEEESSSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHh--ccccceeeccCC
Confidence 34699999999999999999999986543 566888877543
No 83
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.29 E-value=0.0011 Score=57.84 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=22.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
++|.|.|++|+||||+|+.+.....
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~ 27 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLD 27 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcC
Confidence 6899999999999999999987643
No 84
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.26 E-value=0.0025 Score=56.67 Aligned_cols=31 Identities=32% Similarity=0.472 Sum_probs=26.2
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
..+.-+|+|.|.+|+||||||+.+.......
T Consensus 19 ~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 4456689999999999999999999876643
No 85
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.20 E-value=0.012 Score=52.43 Aligned_cols=60 Identities=15% Similarity=0.167 Sum_probs=37.8
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc-CHHHHHHHHHHHhCCCC
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ-DIRKIQREIADKLGLKF 210 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~~ 210 (679)
....||.++|+.|+||||.+..++.....++ ..+..|++.... ...+-++..++.++.+.
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~ 70 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKG--FKVGLVGADVYRPAALEQLQQLGQQIGVPV 70 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTT--CCEEEEECCCSSHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CceEEEEeeccccchhHHHHHhccccCcce
Confidence 4578999999999999997777776665432 347777765432 33455566777787764
No 86
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.15 E-value=0.0015 Score=58.25 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=25.5
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
...+.+|.|+|++|+||||+|+.+++...
T Consensus 3 ~~kp~iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 3 KSKPNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CCCCEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHHC
Confidence 45678999999999999999999998764
No 87
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.12 E-value=0.0013 Score=57.26 Aligned_cols=25 Identities=40% Similarity=0.615 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..|.|.|++|+||||+|+.++++..
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~ 29 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSG 29 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
Confidence 4577999999999999999998764
No 88
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.11 E-value=0.0017 Score=56.33 Aligned_cols=28 Identities=32% Similarity=0.513 Sum_probs=25.0
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
...+++.|.|++|+||||+|+.+.....
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4578999999999999999999998864
No 89
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.09 E-value=0.0018 Score=56.95 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=23.6
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
+.|.|.|++|+|||||+++++......
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHC
Confidence 568999999999999999999887543
No 90
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.06 E-value=0.0019 Score=55.80 Aligned_cols=27 Identities=30% Similarity=0.323 Sum_probs=24.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
++++|+|..|+|||||+..+....+.+
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~ 28 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVRE 28 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 689999999999999999999887754
No 91
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=95.95 E-value=0.0025 Score=61.36 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=35.1
Q ss_pred cccchHHHHHHHHHHhc--------------CCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 131 AFESRMSILNEITDALK--------------NGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~--------------~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.++|.++.++.+...+. ....+.+.++|++|+|||.||+++++...
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~ 74 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLAN 74 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccc
Confidence 35688888877765541 11356788999999999999999998754
No 92
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=95.89 E-value=0.0023 Score=55.79 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.++|.|.|.+|+||||+|+.+++...
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 47999999999999999999999864
No 93
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.87 E-value=0.0023 Score=56.35 Aligned_cols=27 Identities=19% Similarity=0.369 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
++|+|.|+.|+||||+++.+.+.....
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999887654
No 94
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86 E-value=0.0019 Score=57.39 Aligned_cols=28 Identities=25% Similarity=0.286 Sum_probs=24.2
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
..+|.++|++|+||||+|+.++......
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 3588899999999999999999887643
No 95
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.83 E-value=0.0026 Score=56.72 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=25.6
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+..++|.|.|++|+||||+|+.+++...
T Consensus 5 ~~~~~iI~i~GppGSGKsT~a~~La~~~g 33 (196)
T d1ukza_ 5 PDQVSVIFVLGGPGAGKGTQCEKLVKDYS 33 (196)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35678999999999999999999998764
No 96
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.82 E-value=0.0023 Score=55.11 Aligned_cols=24 Identities=33% Similarity=0.511 Sum_probs=21.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
|.|+|++|+||||+++.++.+...
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~~ 26 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLDL 26 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 778899999999999999999753
No 97
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.80 E-value=0.0033 Score=54.65 Aligned_cols=27 Identities=33% Similarity=0.373 Sum_probs=23.1
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..++|.|.|++|+||||+|+.+.+...
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~lg 29 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLPG 29 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 347899999999999999999987543
No 98
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.79 E-value=0.005 Score=58.24 Aligned_cols=52 Identities=25% Similarity=0.409 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCC
Q 005747 139 LNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSES 192 (679)
Q Consensus 139 ~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~ 192 (679)
+..+.+.+.....++|.+.|-||+||||+|..++.....++ ..+..|+....
T Consensus 8 ~~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G--~rVllvD~Dp~ 59 (279)
T d1ihua2 8 LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMG--FDVHLTTSDPA 59 (279)
T ss_dssp HHHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESCCC
T ss_pred HHHHHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEeCCCC
Confidence 34556666678899999999999999999888887766542 34677776643
No 99
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.77 E-value=0.0024 Score=55.14 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=20.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
|.++|++|+||||+++.+++....
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~ 27 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGV 27 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 446699999999999999998764
No 100
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.74 E-value=0.018 Score=53.27 Aligned_cols=100 Identities=20% Similarity=0.349 Sum_probs=61.3
Q ss_pred HHHHHhc-CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc-CHHHHHHHHHHHhCCC---------
Q 005747 141 EITDALK-NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ-DIRKIQREIADKLGLK--------- 209 (679)
Q Consensus 141 ~l~~~L~-~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~--------- 209 (679)
+.++.+. =..-+-++|.|.+|+|||+|+..+.+..... +=+.++|+-+.+.. ...++.+++.+.--..
T Consensus 57 raID~l~pigkGQr~~If~~~g~GKt~l~~~i~~~~~~~-~~~v~V~~~iGer~~ev~~~~~~~~~~~~~~~~~~~~~tv 135 (276)
T d2jdid3 57 KVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKA-HGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVA 135 (276)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHHTTT-CSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEE
T ss_pred eeeeeeccccCCCEEEeeCCCCCCHHHHHHHHHHHHHhh-CCCeEEEEEeccChHHHHHHHHHHHhcCccccccccceEE
Confidence 3444443 1223459999999999999999998875332 23567888777653 4566777766542110
Q ss_pred ----CCccchhH------HHHHHHHHHH--cCCceEEEEecCCC
Q 005747 210 ----FDEESESG------RARRLHDRLK--KEKRILVILDNIWG 241 (679)
Q Consensus 210 ----~~~~~~~~------~~~~l~~~l~--~~k~~LlVlDdv~~ 241 (679)
...++... .+..+-+++. +|+++|+++||+..
T Consensus 136 vv~~~s~~~~~~r~~~~~~a~~iAEyf~~~~G~~VLv~~Dsltr 179 (276)
T d2jdid3 136 LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 179 (276)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECTHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEcchhH
Confidence 00111111 1234556665 38999999999854
No 101
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.72 E-value=0.0024 Score=55.54 Aligned_cols=26 Identities=31% Similarity=0.437 Sum_probs=22.6
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
+.|.++|++|+||||+|+.+++....
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~ 28 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGY 28 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCC
Confidence 35678899999999999999998763
No 102
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=95.68 E-value=0.0054 Score=57.66 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
..+.|.++|++|+||||+|+.+++....
T Consensus 31 ~P~~ilL~GpPGtGKT~la~~la~~~~~ 58 (273)
T d1gvnb_ 31 SPTAFLLGGQPGSGKTSLRSAIFEETQG 58 (273)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 4567899999999999999999998753
No 103
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=95.63 E-value=0.0036 Score=54.30 Aligned_cols=27 Identities=30% Similarity=0.382 Sum_probs=23.1
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..-.|.|.|++|+||||+|+.+++...
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 345689999999999999999998753
No 104
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.52 E-value=0.0035 Score=56.45 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.+|.++|.+|+||||+|+++++....
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNF 28 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 57999999999999999999987653
No 105
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.41 E-value=0.023 Score=52.09 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=34.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEEEEcCCCcCHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVFSEVSESQDIRK 197 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~wv~v~~~~~~~~ 197 (679)
-+++.|+|.+|+||||+|.++........ .-..++|++....++...
T Consensus 34 G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (251)
T d1szpa2 34 GSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVR 84 (251)
T ss_dssp SSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGG
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHH
Confidence 46999999999999999999876643322 124688888877766443
No 106
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=95.38 E-value=0.0041 Score=54.23 Aligned_cols=24 Identities=42% Similarity=0.595 Sum_probs=21.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
|+|+|+.|+|||||++.+......
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCcHHHHHHHHHHhcCCC
Confidence 789999999999999999987653
No 107
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.26 E-value=0.0053 Score=54.13 Aligned_cols=27 Identities=30% Similarity=0.416 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
++|.|.|+.|+||||+++.+......+
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 688999999999999999999987654
No 108
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.26 E-value=0.046 Score=51.60 Aligned_cols=47 Identities=15% Similarity=0.029 Sum_probs=32.5
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIR 196 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~ 196 (679)
.+-+|+|.|.+|+||||+|+.+.........-..+.-|+...-+-..
T Consensus 79 ~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~~~ 125 (308)
T d1sq5a_ 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPN 125 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCCH
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeECCc
Confidence 35699999999999999999999877532111235556655554433
No 109
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.22 E-value=0.012 Score=56.43 Aligned_cols=56 Identities=21% Similarity=0.329 Sum_probs=39.0
Q ss_pred HHHHHHHhc--CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcC
Q 005747 139 LNEITDALK--NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQD 194 (679)
Q Consensus 139 ~~~l~~~L~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~ 194 (679)
..++++.+. ..+..+|+|.|++|+|||||.-.+........+=-.++-++.+.+++
T Consensus 37 ~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~ 94 (323)
T d2qm8a1 37 VRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRT 94 (323)
T ss_dssp HHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSS
T ss_pred HHHHHHHhhhccCCceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHH
Confidence 344444443 45678999999999999999999988755433233466666666654
No 110
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=95.21 E-value=0.013 Score=55.89 Aligned_cols=70 Identities=11% Similarity=0.214 Sum_probs=43.2
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHHcCCc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLKKEKR 231 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~k~ 231 (679)
.++.++|++|+|||.||+.++.....+..| +-+..++-.+ .+.. .....+..+.+..++ +
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~---~~~~~~~~~~--------------~~~G-~~e~~~~~~f~~a~~--~ 183 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKY---ATVRFGEPLS--------------GYNT-DFNVFVDDIARAMLQ--H 183 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCC---EEEEBSCSST--------------TCBC-CHHHHHHHHHHHHHH--C
T ss_pred ceEEEECCCCccHHHHHHHHHHHhcCCCCe---EEEEhhHhhh--------------cccc-hHHHHHHHHHHHHhh--c
Confidence 355668999999999999999987644334 2244444321 1111 123344555555543 5
Q ss_pred eEEEEecCCC
Q 005747 232 ILVILDNIWG 241 (679)
Q Consensus 232 ~LlVlDdv~~ 241 (679)
.+|++|.+..
T Consensus 184 ~ilf~DEid~ 193 (321)
T d1w44a_ 184 RVIVIDSLKN 193 (321)
T ss_dssp SEEEEECCTT
T ss_pred cEEEeehhhh
Confidence 7999999854
No 111
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.20 E-value=0.012 Score=56.54 Aligned_cols=56 Identities=21% Similarity=0.219 Sum_probs=32.5
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHH
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIA 203 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~ 203 (679)
.++..+|+|.|++|+|||||...+......+.+=-.++-++.+.+++-..++.+-.
T Consensus 51 ~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~ 106 (327)
T d2p67a1 51 CGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKT 106 (327)
T ss_dssp CSCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-------------
T ss_pred cCCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchh
Confidence 45688999999999999999999988766543223345556666666555555443
No 112
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=95.16 E-value=0.0095 Score=55.89 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=30.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSE 191 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~ 191 (679)
|.|+|+|-||+||||+|..++...... -..+.-|+...
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~--G~rVllID~D~ 39 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAM--GKTIMVVGCDP 39 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTT--TCCEEEEEECT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhC--CCcEEEEecCC
Confidence 689999999999999999999887754 23566777653
No 113
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.07 E-value=0.0061 Score=55.36 Aligned_cols=41 Identities=32% Similarity=0.302 Sum_probs=32.0
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIAD 204 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~ 204 (679)
.+||+|.|++|+||||+|+.+.++..-. . .+..+++++++.
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~gl~----~---------iStGdLlR~~a~ 43 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEALQWH----L---------LDSGAIYRVLAL 43 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHTCE----E---------EEHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCc----E---------ECHHHHHHHHHH
Confidence 4699999999999999999999997522 1 255677777654
No 114
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.02 E-value=0.014 Score=55.55 Aligned_cols=47 Identities=21% Similarity=0.317 Sum_probs=35.7
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHH
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIR 196 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~ 196 (679)
+...++|.+.|-||+||||+|..++.....++ ..+..|+.....+..
T Consensus 5 ~~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G--~rVLlvD~Dp~~~l~ 51 (296)
T d1ihua1 5 QNIPPYLFFTGKGGVGKTSISCATAIRLAEQG--KRVLLVSTDPASNVG 51 (296)
T ss_dssp SSCCSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCTTCCHH
T ss_pred CCCCeEEEEECCCcChHHHHHHHHHHHHHHCC--CCEEEEeCCCCCCHH
Confidence 45578999999999999999999988876542 347777777554444
No 115
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.97 E-value=0.0068 Score=53.72 Aligned_cols=25 Identities=20% Similarity=0.220 Sum_probs=22.7
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+|.|.|++|+||||+|+.+++...
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g 26 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYG 26 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhC
Confidence 5789999999999999999998763
No 116
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.97 E-value=0.011 Score=53.02 Aligned_cols=30 Identities=30% Similarity=0.362 Sum_probs=25.9
Q ss_pred cCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 147 KNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 147 ~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
......+|.+.|++|+||||+|+.+.....
T Consensus 20 ~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 20 RNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred hCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 356678999999999999999999998753
No 117
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.95 E-value=0.007 Score=54.61 Aligned_cols=27 Identities=15% Similarity=0.263 Sum_probs=23.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
+-+|+|.|..|+||||+|+.+.+....
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhch
Confidence 348999999999999999999987653
No 118
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=94.93 E-value=0.0068 Score=58.99 Aligned_cols=48 Identities=15% Similarity=0.204 Sum_probs=35.6
Q ss_pred CCcccccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 127 KDYEAFESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 127 ~~~~~~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.+...++|.+..+..|.-..-..+.+-|.+.|.+|+||||+|+.+..-
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~i 51 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAAL 51 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHH
T ss_pred CChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHh
Confidence 356788999987776554333223345789999999999999999863
No 119
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.79 E-value=0.0073 Score=53.36 Aligned_cols=25 Identities=28% Similarity=0.433 Sum_probs=21.8
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.|.|+|++|+|||||++.+......
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~ 26 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSS 26 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCC
Confidence 4779999999999999999887653
No 120
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.73 E-value=0.0086 Score=52.44 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=22.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
++|.|+|++|+|||||++.+.++..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 5889999999999999999987753
No 121
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=94.73 E-value=0.0085 Score=54.36 Aligned_cols=41 Identities=24% Similarity=0.277 Sum_probs=31.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKL 206 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l 206 (679)
+|+|-|++|+||||+|+.++.+.... + .+..++++.++...
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~-------~------istGdl~R~~a~~~ 45 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFT-------Y------LDTGAMYRAATYMA 45 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCE-------E------EEHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCc-------E------ECHHHHHHHHHHHH
Confidence 68899999999999999999987632 1 25566777766443
No 122
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.64 E-value=0.0099 Score=52.40 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=21.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.++| |+|++|+||||+|+.+++...
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~~~g 28 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAKNFC 28 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHHHHT
T ss_pred ccEEE-EECCCCCCHHHHHHHHHHHhC
Confidence 45666 789999999999999998763
No 123
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.59 E-value=0.008 Score=52.89 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=22.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
|.|.|+|++|+|||||++.+.++...
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCc
Confidence 45789999999999999999887653
No 124
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=94.47 E-value=0.011 Score=52.26 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=23.9
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..++|.|.|++|+||||+|+.+++...
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~g 33 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKYG 33 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHTC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 357999999999999999999998754
No 125
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=94.45 E-value=0.016 Score=54.08 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=53.5
Q ss_pred HHHHHhcC-CCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEE-EcCCCcCHHHHHHHHHHHhCCC----CCccc
Q 005747 141 EITDALKN-GDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFS-EVSESQDIRKIQREIADKLGLK----FDEES 214 (679)
Q Consensus 141 ~l~~~L~~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv-~v~~~~~~~~l~~~i~~~l~~~----~~~~~ 214 (679)
++++.+.. ..-+-++|.|..|+|||+|+.++.+.....+ -++++++ .+... .+++ .++.+..... ....+
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~~-~~~v~~~~~iger--~~ev-~~~~~~~~~~vv~~t~d~~ 107 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNH-PDCVLMVLLIDER--PEEV-TEMQRLVKGEVVASTFDEP 107 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHHHHC-TTSEEEEEEEEEC--HHHH-HHHHHHCSSEEEEEETTSC
T ss_pred eeeeecccccCCCeeeEeCCCCCCHHHHHHHHHHHHhhcC-CCeEEEEEeecee--HHHH-HhHHhhcceEEEeccCCCc
Confidence 46666652 3346789999999999999999998765432 3333333 33322 2222 2222222110 01111
Q ss_pred hh------HHHHHHHHHHH-cCCceEEEEecCCCc
Q 005747 215 ES------GRARRLHDRLK-KEKRILVILDNIWGN 242 (679)
Q Consensus 215 ~~------~~~~~l~~~l~-~~k~~LlVlDdv~~~ 242 (679)
.. ..+..+-+++. +|+.+|+++||+...
T Consensus 108 ~~~r~~~~~~a~~iAEyfrd~G~dVLli~Dsltr~ 142 (289)
T d1xpua3 108 ASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRL 142 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCceeecCcHHHH
Confidence 11 12233444443 588999999998543
No 126
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.44 E-value=0.01 Score=51.80 Aligned_cols=23 Identities=30% Similarity=0.440 Sum_probs=21.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|.|.|++|+||||+|+.+++...
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~ 25 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYG 25 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 67999999999999999998874
No 127
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.41 E-value=0.011 Score=51.40 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=22.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+.|.|+|++|+|||||++.+..+..
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHhCC
Confidence 36799999999999999999987654
No 128
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=94.40 E-value=0.01 Score=52.21 Aligned_cols=25 Identities=20% Similarity=0.183 Sum_probs=21.9
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.|.|.|++|+||||+|+.+++...
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~ 28 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQ 28 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHC
Confidence 3477999999999999999998874
No 129
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.24 E-value=0.043 Score=51.12 Aligned_cols=79 Identities=6% Similarity=0.026 Sum_probs=46.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCC-CeEEEEEcCCCcCHHHHHHHHHHHhCCC-------CCccchhHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLF-DQVVFSEVSESQDIRKIQREIADKLGLK-------FDEESESGRARRL 222 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F-~~~~wv~v~~~~~~~~l~~~i~~~l~~~-------~~~~~~~~~~~~l 222 (679)
+-+|+|.|..|+||||||..+.........+ ..++.++..+-+-..+=...+.+..... ....-+...+...
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~~~ 106 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEV 106 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhHHHHHHH
Confidence 3489999999999999999988775443222 2466666666543333334444443211 1223344556666
Q ss_pred HHHHHcC
Q 005747 223 HDRLKKE 229 (679)
Q Consensus 223 ~~~l~~~ 229 (679)
...+.++
T Consensus 107 l~~l~~~ 113 (286)
T d1odfa_ 107 LNTIFNN 113 (286)
T ss_dssp HHHHTC-
T ss_pred HHHHHhh
Confidence 6666543
No 130
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=94.20 E-value=0.012 Score=51.74 Aligned_cols=24 Identities=29% Similarity=0.484 Sum_probs=20.9
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-|.|.|++|+||||+|+.++.+..
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHC
Confidence 466889999999999999998753
No 131
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.17 E-value=0.013 Score=51.16 Aligned_cols=23 Identities=30% Similarity=0.367 Sum_probs=21.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|.|.|++|+||||+|+.+++...
T Consensus 3 I~i~G~pGsGKsT~a~~La~~~g 25 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEKLG 25 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 67889999999999999998874
No 132
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=94.07 E-value=0.014 Score=51.06 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=21.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|.|.|++|+||||+|+.++++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g 25 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYG 25 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 67899999999999999999874
No 133
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=94.02 E-value=0.023 Score=53.75 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=30.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSES 192 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~ 192 (679)
.+.|+|+|-||+||||+|..++...... -..+.-|+....
T Consensus 2 Mr~IaisgKGGVGKTT~a~NLA~~LA~~--G~rVLlID~DpQ 41 (289)
T d2afhe1 2 MRQCAIYGKGGIGKSTTTQNLVAALAEM--GKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHT--TCCEEEEEECSS
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEecCCC
Confidence 3678899999999999999988876543 234777777643
No 134
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.92 E-value=0.024 Score=51.54 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=31.3
Q ss_pred ccEEEEE-cCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCC
Q 005747 151 VNTLGIY-GIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSE 191 (679)
Q Consensus 151 ~~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~ 191 (679)
.|||+|+ |-||+||||+|..++...... -..+++|+...
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~--g~~VlliD~D~ 40 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQL--GHDVTIVDADI 40 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 3788888 789999999999999887654 34688888753
No 135
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.74 E-value=0.017 Score=50.25 Aligned_cols=23 Identities=30% Similarity=0.391 Sum_probs=20.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|.|.|++|+||||+|+.+++...
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g 27 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFH 27 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 44779999999999999998764
No 136
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.70 E-value=0.068 Score=48.95 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=36.4
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccC----CCCCeEEEEEcCCCcCHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEND----KLFDQVVFSEVSESQDIRKI 198 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~----~~F~~~~wv~v~~~~~~~~l 198 (679)
-+++.|+|.+|+||||+|.++....... .....++|+......+...+
T Consensus 36 G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI 87 (254)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHH
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHH
Confidence 4699999999999999999998775422 22456888888777766544
No 137
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.61 E-value=0.019 Score=49.98 Aligned_cols=23 Identities=22% Similarity=0.195 Sum_probs=20.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|.|.|++|+||||+|+.++++..
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~ 25 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYG 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 66899999999999999998764
No 138
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.56 E-value=0.022 Score=50.74 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=22.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
++|.|+|++|+|||||.+.+..+..
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 6889999999999999999988754
No 139
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.41 E-value=0.018 Score=50.62 Aligned_cols=22 Identities=36% Similarity=0.401 Sum_probs=19.4
Q ss_pred ccEEEEEcCCCCcHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVA 172 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~ 172 (679)
+-+|+|.|..|+||||+|..+-
T Consensus 3 p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHH
Confidence 4589999999999999999874
No 140
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=93.40 E-value=0.033 Score=54.27 Aligned_cols=26 Identities=27% Similarity=0.415 Sum_probs=22.5
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
....+..+|+.|+|||.||+.++...
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~ 92 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHL 92 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcceeeeCCCCccHHHHHHHHHhhc
Confidence 35568999999999999999998764
No 141
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=93.21 E-value=0.023 Score=51.61 Aligned_cols=25 Identities=28% Similarity=0.291 Sum_probs=21.9
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|+.|.|||||++.++--.
T Consensus 29 Ge~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 29 GEFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCEEEEECCCCChHHHHHHHHhcCC
Confidence 3589999999999999999998653
No 142
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=93.19 E-value=0.062 Score=49.20 Aligned_cols=45 Identities=20% Similarity=0.333 Sum_probs=33.9
Q ss_pred ccchHHHHHHHHHHhc--CCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 132 FESRMSILNEITDALK--NGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 132 ~~gr~~~~~~l~~~L~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|||....++++.+.+. .....-|.|.|..|+|||++|+.+.....
T Consensus 2 ~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~ 48 (247)
T d1ny5a2 2 YVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSD 48 (247)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhcC
Confidence 6777777777777665 22223468999999999999999987543
No 143
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.07 E-value=0.025 Score=51.08 Aligned_cols=25 Identities=28% Similarity=0.312 Sum_probs=21.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|+.|+|||||.+.++--.
T Consensus 26 Gei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 26 GEFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCEEEEECCCCChHHHHHHHHhcCC
Confidence 3589999999999999999997643
No 144
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=93.00 E-value=0.022 Score=51.43 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=21.6
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|++|+|||||.+.++--.
T Consensus 31 Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 31 GEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCcchhhHhccCCC
Confidence 3589999999999999999887643
No 145
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=93.00 E-value=0.032 Score=51.02 Aligned_cols=25 Identities=40% Similarity=0.522 Sum_probs=22.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
||+|.|+.|+|||||...+.+....
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~~ 26 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLED 26 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHhh
Confidence 7899999999999999999876543
No 146
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=92.94 E-value=0.018 Score=50.97 Aligned_cols=26 Identities=38% Similarity=0.506 Sum_probs=22.4
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|+|||||.+.++.-.+
T Consensus 27 Gei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 27 GNVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp TCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHhcccc
Confidence 35899999999999999999987543
No 147
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=92.85 E-value=0.023 Score=51.64 Aligned_cols=25 Identities=32% Similarity=0.493 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+++|+|++|+|||||++.++--.+
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHcCCcc
Confidence 5899999999999999999976543
No 148
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=92.84 E-value=0.021 Score=50.52 Aligned_cols=27 Identities=30% Similarity=0.195 Sum_probs=22.9
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
...-+|+|-|.-|+||||+++.+.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHh
Confidence 344589999999999999999987654
No 149
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.84 E-value=0.028 Score=50.94 Aligned_cols=26 Identities=35% Similarity=0.357 Sum_probs=22.4
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||.+.+.--.+
T Consensus 32 Ge~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 32 GEFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHHcCCC
Confidence 35899999999999999999987543
No 150
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.77 E-value=0.03 Score=47.19 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.|+|.+|+|||||...+..+.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6799999999999999988764
No 151
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=92.66 E-value=0.099 Score=48.30 Aligned_cols=89 Identities=13% Similarity=0.214 Sum_probs=50.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCc-CHHHHHHHHHHHhCCC-------CCccch-h-----H
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQ-DIRKIQREIADKLGLK-------FDEESE-S-----G 217 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~-------~~~~~~-~-----~ 217 (679)
+-++|.|.+|+|||+|+......... .-+.++|+-+.... ...++.+++.+.=... ...++. . .
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~~~--~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~p~~~r~~a~~ 145 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQQG--QNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPY 145 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTCCT--TTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHHHH
T ss_pred ceEeeccCCCCChHHHHHHHHhhhcc--cCceeeeeeecchhHHHHHHHHhhccCCcceeeeecccccCccHHHHHHHHH
Confidence 34789999999999999886555432 24567777766643 2333333332210000 001111 1 1
Q ss_pred HHHHHHHHHH-cCCceEEEEecCCCc
Q 005747 218 RARRLHDRLK-KEKRILVILDNIWGN 242 (679)
Q Consensus 218 ~~~~l~~~l~-~~k~~LlVlDdv~~~ 242 (679)
.+..+-+++. +++++|+++||+...
T Consensus 146 ~a~tiAEyfrd~G~~Vlll~Dsltr~ 171 (276)
T d1fx0a3 146 TGAALAEYFMYRERHTLIIYDDLSKQ 171 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECHHHH
T ss_pred HHHHHHHHHHHcCCceeEEeeccHHH
Confidence 2334445554 588999999998543
No 152
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=92.65 E-value=0.029 Score=51.15 Aligned_cols=25 Identities=40% Similarity=0.546 Sum_probs=22.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..++|+|..|.|||||++.+..-..
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHhcCC
Confidence 5899999999999999999987543
No 153
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.56 E-value=0.032 Score=50.47 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=21.9
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-+++|+|+.|.|||||.+.++--..
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~ 49 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVK 49 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred EEEEEECCCCChHHHHHHHHHcCCC
Confidence 3788999999999999999987543
No 154
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.45 E-value=0.11 Score=47.47 Aligned_cols=47 Identities=15% Similarity=0.178 Sum_probs=36.1
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhcc----CCCCCeEEEEEcCCCcCHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEN----DKLFDQVVFSEVSESQDIRK 197 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~----~~~F~~~~wv~v~~~~~~~~ 197 (679)
-+++.|+|.+|+|||++|.+++..... ...+..+.|+.....++...
T Consensus 37 G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T d1v5wa_ 37 MAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDR 87 (258)
T ss_dssp SEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHH
Confidence 469999999999999999999876432 23456788888887766543
No 155
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=92.44 E-value=0.028 Score=51.83 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=21.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|+.|.|||||++.+.--.
T Consensus 28 GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 28 GDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3589999999999999999997543
No 156
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.42 E-value=0.054 Score=49.13 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=30.0
Q ss_pred cEEEEE-cCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcC
Q 005747 152 NTLGIY-GIGGIGKTTLAKEVARRAENDKLFDQVVFSEVS 190 (679)
Q Consensus 152 ~vi~I~-G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~ 190 (679)
++|+|+ +-||+||||+|..++...... -..++.|+..
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~--g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDR--GRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHT--TCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhC--CCCEEEEeCC
Confidence 689999 679999999999999887754 3457888765
No 157
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.42 E-value=0.022 Score=53.16 Aligned_cols=27 Identities=15% Similarity=0.273 Sum_probs=20.5
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+..+|+|.|.+|+||||+|+.+.+...
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~~ 29 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIFR 29 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 456999999999999999998877654
No 158
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=92.34 E-value=0.031 Score=51.33 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=21.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|+.|.|||||++.+..-.
T Consensus 41 Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 41 GKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp TCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCEEEEECCCCChHHHHHHHHhccc
Confidence 3589999999999999999997643
No 159
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=92.31 E-value=0.028 Score=50.58 Aligned_cols=26 Identities=27% Similarity=0.206 Sum_probs=22.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||.+.+.--..
T Consensus 26 Ge~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 26 GEYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp TCEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 35899999999999999999987543
No 160
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.26 E-value=0.034 Score=51.04 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||++.+..-..
T Consensus 40 Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 40 GEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCCcHHHHHHHHhcccC
Confidence 46899999999999999999976543
No 161
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=92.22 E-value=0.034 Score=47.28 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|+|+|.+|+|||||.+.+....
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7799999999999999988763
No 162
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.21 E-value=0.035 Score=51.90 Aligned_cols=26 Identities=35% Similarity=0.363 Sum_probs=22.6
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||++.+.--..
T Consensus 62 Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 62 GEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCEEEEECCCCChHHHHHHHHhCCCc
Confidence 36899999999999999999987543
No 163
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=92.08 E-value=0.086 Score=51.16 Aligned_cols=29 Identities=24% Similarity=0.082 Sum_probs=25.5
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
...+.+.++|++|+|||++|+.+++....
T Consensus 152 ~~~~~~~~~g~~~~gk~~~~~~~~~~~~~ 180 (362)
T d1svma_ 152 PKKRYWLFKGPIDSGKTTLAAALLELCGG 180 (362)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred CCcCeEEEECCCCCCHHHHHHHHHHHcCC
Confidence 44568999999999999999999998764
No 164
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=92.08 E-value=0.037 Score=50.49 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=21.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-..++|+|+.|.|||||++.+..-.
T Consensus 28 Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 28 NSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhh
Confidence 3689999999999999999997643
No 165
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=92.00 E-value=0.042 Score=48.31 Aligned_cols=26 Identities=19% Similarity=0.520 Sum_probs=22.4
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
++.+.|+|+|.+|+|||||...+...
T Consensus 21 ~~~~~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 21 GGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCCCCHHHHHHHhcCC
Confidence 44567999999999999999999853
No 166
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=91.80 E-value=0.47 Score=43.73 Aligned_cols=52 Identities=12% Similarity=0.193 Sum_probs=35.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKL 206 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l 206 (679)
.++.|.|.+|+||||++.+++.+...... ..++|++.. .+..++...++...
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g-~~v~~~s~E--~~~~~~~~r~~~~~ 87 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMG-KKVGLAMLE--ESVEETAEDLIGLH 87 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSC-CCEEEEESS--SCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhcc-cceeEeeec--cchhhHHhHHHHHh
Confidence 58889999999999999999876543222 245666554 35666666665544
No 167
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.71 E-value=0.21 Score=44.26 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=32.4
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCC----CCCeEEEEEcCCCcCHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDK----LFDQVVFSEVSESQDIRK 197 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~----~F~~~~wv~v~~~~~~~~ 197 (679)
-+++.|.|.+|+|||++|.+++....... .+....++..........
T Consensus 23 G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPER 73 (242)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHHH
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHHHHHhhccccccceehhhhhhhhhHHHH
Confidence 46999999999999999999987754332 223455555555544433
No 168
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.69 E-value=0.051 Score=49.60 Aligned_cols=28 Identities=25% Similarity=0.316 Sum_probs=24.5
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
+++.|+|-|.-|+||||+++.+.+....
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~l~~ 28 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKTYPE 28 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHCTT
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHhh
Confidence 3678999999999999999999987643
No 169
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.65 E-value=0.07 Score=45.77 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=25.5
Q ss_pred HHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 140 NEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 140 ~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
..+..++.+...+ |.|+|.+|+|||||...+...
T Consensus 5 ~~~~~~~~~k~~k-I~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 5 TRIWRLFNHQEHK-VIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHTTSCEE-EEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHhCCCeEE-EEEECCCCCCHHHHHHHHhcC
Confidence 3455555555555 669999999999999988764
No 170
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.64 E-value=0.16 Score=45.61 Aligned_cols=40 Identities=20% Similarity=0.167 Sum_probs=27.2
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSE 191 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~ 191 (679)
-.++.|.|.+|+|||++|.+++......+ -..++|++...
T Consensus 26 G~~~~I~G~~G~GKT~la~~~~~~~~~~~-~~~~~~~s~e~ 65 (242)
T d1tf7a1 26 GRSTLVSGTSGTGKTLFSIQFLYNGIIEF-DEPGVFVTFEE 65 (242)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSS
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhc-CCCcccccccC
Confidence 46899999999999999987654422211 12466766554
No 171
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=91.54 E-value=0.16 Score=42.42 Aligned_cols=29 Identities=24% Similarity=0.270 Sum_probs=25.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
..-+|.+.|.=|+||||+++.+++.....
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 34589999999999999999999987654
No 172
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.46 E-value=0.047 Score=46.45 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+.+.
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 779999999999999999875
No 173
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.35 E-value=0.049 Score=46.43 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|.+|+|||+|+..+.+.
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 779999999999999998865
No 174
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.33 E-value=0.033 Score=50.52 Aligned_cols=25 Identities=36% Similarity=0.512 Sum_probs=22.1
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.+++|+|+.|.|||||++.+..-.
T Consensus 31 Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 31 GERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3589999999999999999998743
No 175
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=91.32 E-value=0.12 Score=46.96 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=37.7
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccCC--------------CCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAENDK--------------LFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~~--------------~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
-+++.|.|.+|+|||++|.+++....... ....+.|++.....+.. ....+...+.
T Consensus 34 G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~-~~~~~~~~~~ 103 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPE-RIMQMAEHAG 103 (258)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHH-HHHHHHHHHT
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHhcCCCceEEeecccchhcCceEEEEEecCCcCHH-HHHHHHhhcc
Confidence 36999999999999999999987654321 11247788876665543 3344444443
No 176
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.31 E-value=0.049 Score=46.80 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|.+|+|||||+..+.++
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 679999999999999998765
No 177
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.30 E-value=0.068 Score=46.12 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=19.6
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
..-|.++|.+|+|||||...+...
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 345779999999999999887543
No 178
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.20 E-value=0.056 Score=45.92 Aligned_cols=21 Identities=19% Similarity=0.529 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+.+.
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999988764
No 179
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=91.18 E-value=0.047 Score=49.66 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||.+.+.--.+
T Consensus 32 Gei~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 32 GQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 35899999999999999999987543
No 180
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.17 E-value=0.078 Score=47.16 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
..|+|-|+-|+||||+++.+.+....+
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~~L~~~ 30 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVEALCAA 30 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 578999999999999999999987654
No 181
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.09 E-value=0.31 Score=44.98 Aligned_cols=100 Identities=15% Similarity=0.209 Sum_probs=53.1
Q ss_pred HHHHhc-CCCccEEEEEcCCCCcHHHHHHHHHHHhccC-----C-CCCeEEEEEcCCCc-CHHHHHHHHHHHhCCC----
Q 005747 142 ITDALK-NGDVNTLGIYGIGGIGKTTLAKEVARRAEND-----K-LFDQVVFSEVSESQ-DIRKIQREIADKLGLK---- 209 (679)
Q Consensus 142 l~~~L~-~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~-----~-~F~~~~wv~v~~~~-~~~~l~~~i~~~l~~~---- 209 (679)
.++.+. =..-+-++|.|.+|+|||+++..+....... . .=..++++-+.... ...++...+...-..+
T Consensus 58 aID~l~pig~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~~~~~~tvv 137 (285)
T d2jdia3 58 AVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIV 137 (285)
T ss_dssp HHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred EEecccCccCCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCccHHHHHHHHHHhcccccccceEE
Confidence 444443 1233568899999999999998877653211 0 11235566665543 3344444443322111
Q ss_pred ---CCccchhH------HHHHHHHHHH-cCCceEEEEecCCC
Q 005747 210 ---FDEESESG------RARRLHDRLK-KEKRILVILDNIWG 241 (679)
Q Consensus 210 ---~~~~~~~~------~~~~l~~~l~-~~k~~LlVlDdv~~ 241 (679)
...++... .+..+-+++. +||++|+++||+..
T Consensus 138 v~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~Dsltr 179 (285)
T d2jdia3 138 VSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSK 179 (285)
T ss_dssp EEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHcCCcEEEEEcChHH
Confidence 01111111 1123334443 58999999999854
No 182
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.99 E-value=0.055 Score=46.11 Aligned_cols=22 Identities=27% Similarity=0.581 Sum_probs=19.7
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||||+..+.++
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999998875
No 183
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=90.92 E-value=0.051 Score=49.31 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=22.6
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-.+++|+|+.|.|||||.+.+..-..
T Consensus 28 Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 28 GEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 46899999999999999999987543
No 184
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=90.92 E-value=1.6 Score=38.78 Aligned_cols=44 Identities=20% Similarity=0.158 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 134 SRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 134 gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
......+++.+.+..+......++|..|.|||.++-......-.
T Consensus 59 ~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~ 102 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVD 102 (233)
T ss_dssp HHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHH
Confidence 56677888888888888888999999999999999887776543
No 185
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.88 E-value=0.051 Score=46.55 Aligned_cols=21 Identities=29% Similarity=0.789 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||...+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 679999999999999988764
No 186
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.87 E-value=0.058 Score=46.12 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+...
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 789999999999999988765
No 187
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.83 E-value=0.057 Score=45.83 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||+|++.+.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999988653
No 188
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.81 E-value=0.059 Score=45.95 Aligned_cols=22 Identities=18% Similarity=0.413 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.|+|.+|+|||||.+.+.+..
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999988753
No 189
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.81 E-value=0.053 Score=49.83 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+++|+|+.|.|||||++.++--..
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCcHHHHHHHHHCCCc
Confidence 5899999999999999999987644
No 190
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.78 E-value=0.058 Score=46.22 Aligned_cols=22 Identities=27% Similarity=0.545 Sum_probs=19.6
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||||++.+.+.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999998875
No 191
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.73 E-value=0.06 Score=45.89 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|.+|+|||+|+..+...
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999998764
No 192
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.72 E-value=0.2 Score=44.57 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=24.6
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.-+.|+|-|+-|+||||+++.+.+....
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 3468999999999999999999988764
No 193
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.66 E-value=0.038 Score=50.43 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.1
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.+.|+|-|+-|+||||+|+.+.+...
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 47899999999999999999988754
No 194
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.63 E-value=0.11 Score=45.89 Aligned_cols=26 Identities=27% Similarity=0.466 Sum_probs=22.9
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
.|+|-|.-|+||||+++.+.+....+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~ 27 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAA 27 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 58899999999999999999887543
No 195
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.56 E-value=0.064 Score=45.80 Aligned_cols=22 Identities=32% Similarity=0.659 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||+|.+.+.+..
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 5789999999999999998754
No 196
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.51 E-value=0.063 Score=45.56 Aligned_cols=21 Identities=33% Similarity=0.496 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|.+|+|||||...+...
T Consensus 5 i~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHcCC
Confidence 679999999999999998654
No 197
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=90.48 E-value=0.067 Score=47.59 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=17.7
Q ss_pred EEEEEcCCCCcHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEV 171 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v 171 (679)
+|+|.|..|+||||+|+.+
T Consensus 5 iIgitG~igSGKStv~~~l 23 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAF 23 (208)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCcCCHHHHHHHH
Confidence 8999999999999999865
No 198
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=90.48 E-value=0.13 Score=51.41 Aligned_cols=47 Identities=21% Similarity=0.328 Sum_probs=34.7
Q ss_pred cccchHHHHHHHHHHhc--------CC------CccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 131 AFESRMSILNEITDALK--------NG------DVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 131 ~~~gr~~~~~~l~~~L~--------~~------~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.++|.++.++.+--++- +. ..+-|.++|+.|+|||.||+.++....+
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~V 75 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANA 75 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCC
Confidence 45687777776655442 11 2456999999999999999999987653
No 199
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.47 E-value=0.066 Score=45.77 Aligned_cols=23 Identities=22% Similarity=0.413 Sum_probs=19.9
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|.++|.+|+|||||+..+.+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 37899999999999999988653
No 200
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.43 E-value=0.064 Score=46.03 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.|+|.+|+|||+|+..+.+.
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4779999999999999998865
No 201
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.38 E-value=0.067 Score=45.92 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|+++|.+|+|||||+..+...
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 789999999999999998764
No 202
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.34 E-value=0.072 Score=45.26 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||||+..+.+..
T Consensus 5 i~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6799999999999999988753
No 203
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.31 E-value=0.067 Score=45.65 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||+|++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 779999999999999988654
No 204
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.28 E-value=0.077 Score=45.33 Aligned_cols=22 Identities=32% Similarity=0.511 Sum_probs=19.3
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.|+|+|..|+|||||+..+...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998753
No 205
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.24 E-value=0.068 Score=45.73 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=19.6
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||+|...+..+
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3789999999999999998775
No 206
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.21 E-value=0.071 Score=45.38 Aligned_cols=22 Identities=32% Similarity=0.626 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||+|++.+....
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6799999999999999988763
No 207
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=90.13 E-value=0.058 Score=48.78 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.+++|+|+.|.|||||.+.+..-
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 58999999999999999998763
No 208
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.13 E-value=0.075 Score=45.21 Aligned_cols=23 Identities=22% Similarity=0.475 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.-|.|+|..|+|||||+..+.+.
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 45789999999999999998764
No 209
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.13 E-value=0.09 Score=45.80 Aligned_cols=22 Identities=32% Similarity=0.446 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||+|.+.+....
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 6799999999999999887654
No 210
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.09 E-value=0.077 Score=47.66 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=22.7
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.++|..|.|+-|.|||||.+.+.+.
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHhc
Confidence 5789999999999999999999875
No 211
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=90.05 E-value=0.077 Score=47.03 Aligned_cols=20 Identities=40% Similarity=0.464 Sum_probs=18.2
Q ss_pred cEEEEEcCCCCcHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEV 171 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v 171 (679)
-+|+|.|..|+||||+|+.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999876
No 212
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.01 E-value=0.23 Score=43.87 Aligned_cols=36 Identities=31% Similarity=0.401 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEE
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSE 188 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~ 188 (679)
+.|+|-|.-|+||||+++.+.+.....+ +..+.+..
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g-~~~~~~~~ 38 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLG-IRDMVFTR 38 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCC-CCeEEEec
Confidence 5789999999999999999998875432 34444443
No 213
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.95 E-value=0.088 Score=46.61 Aligned_cols=24 Identities=21% Similarity=0.203 Sum_probs=21.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
+-|+|+|.+|+|||||...+....
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHcCC
Confidence 468999999999999999998753
No 214
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.94 E-value=0.075 Score=45.59 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988764
No 215
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.90 E-value=0.076 Score=45.15 Aligned_cols=22 Identities=32% Similarity=0.650 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||||+..+.+..
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7899999999999999988753
No 216
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.85 E-value=0.14 Score=45.60 Aligned_cols=34 Identities=24% Similarity=0.503 Sum_probs=25.6
Q ss_pred HHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 139 LNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 139 ~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
++.|.++|.+ +..+++|.+|+|||||...+..+.
T Consensus 86 ~~~L~~~l~~---kt~~~~G~SGVGKSTLiN~L~~~~ 119 (225)
T d1u0la2 86 IEELKEYLKG---KISTMAGLSGVGKSSLLNAINPGL 119 (225)
T ss_dssp HHHHHHHHSS---SEEEEECSTTSSHHHHHHHHSTTC
T ss_pred HhhHHHHhcC---CeEEEECCCCCCHHHHHHhhcchh
Confidence 4455566643 577899999999999999886543
No 217
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.84 E-value=0.077 Score=45.67 Aligned_cols=23 Identities=35% Similarity=0.352 Sum_probs=19.8
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|.|+|.+|+|||+|+..+.+..
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 46789999999999999887753
No 218
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.83 E-value=0.079 Score=45.90 Aligned_cols=23 Identities=30% Similarity=0.364 Sum_probs=20.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|.|+|.+|+|||+|...+.++.
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999988753
No 219
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=89.82 E-value=0.049 Score=49.97 Aligned_cols=24 Identities=33% Similarity=0.470 Sum_probs=21.0
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-..++|+|..|.|||||++.+..-
T Consensus 44 Ge~vaivG~sGsGKSTLl~ll~gl 67 (255)
T d2hyda1 44 GETVAFVGMSGGGKSTLINLIPRF 67 (255)
T ss_dssp TCEEEEECSTTSSHHHHHTTTTTS
T ss_pred CCEEEEECCCCCcHHHHHHHHHhc
Confidence 358999999999999999988754
No 220
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.76 E-value=0.092 Score=46.41 Aligned_cols=23 Identities=26% Similarity=0.264 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+.|+|+|.+|+|||||...+...
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999999865
No 221
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.74 E-value=0.073 Score=46.25 Aligned_cols=21 Identities=33% Similarity=0.400 Sum_probs=18.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|.+|+|||||+..+.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 679999999999999988754
No 222
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.74 E-value=0.082 Score=45.41 Aligned_cols=21 Identities=29% Similarity=0.545 Sum_probs=19.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.|+|..|+|||||+..+.+.
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998765
No 223
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.71 E-value=0.09 Score=44.14 Aligned_cols=22 Identities=32% Similarity=0.416 Sum_probs=19.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+++|.+|+|||||+..+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999998764
No 224
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.59 E-value=0.086 Score=44.98 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|..|+|||+|+..+....
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999988753
No 225
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=89.54 E-value=0.081 Score=45.38 Aligned_cols=22 Identities=36% Similarity=0.561 Sum_probs=19.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||||...+...
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4789999999999999988553
No 226
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=89.52 E-value=0.091 Score=45.21 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=21.5
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
...|+|+|.+|+|||||...+...
T Consensus 5 ~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 5 SGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCCHHHHHHHHhCC
Confidence 457999999999999999999865
No 227
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=89.47 E-value=0.098 Score=46.66 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=26.8
Q ss_pred cEEEEEcCC-CCcHHHHHHHHHHHhccCCCCCeEEEEE
Q 005747 152 NTLGIYGIG-GIGKTTLAKEVARRAENDKLFDQVVFSE 188 (679)
Q Consensus 152 ~vi~I~G~g-GiGKTtLa~~v~~~~~~~~~F~~~~wv~ 188 (679)
+.+.|.|.| ||||||++..++.-...+. ..+..++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G--~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAG--YRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEC
Confidence 467899998 9999999999998876552 2355554
No 228
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.33 E-value=0.1 Score=44.55 Aligned_cols=22 Identities=27% Similarity=0.376 Sum_probs=19.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.|+|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999988765
No 229
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.31 E-value=0.088 Score=45.71 Aligned_cols=22 Identities=36% Similarity=0.415 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.|+|.+|+|||+|+..+.++.
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 7899999999999999987753
No 230
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.28 E-value=0.088 Score=46.11 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=19.6
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.|+|.+|+|||||+..+....
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHhhCC
Confidence 7899999999999999988753
No 231
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.25 E-value=0.097 Score=44.95 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=21.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
...|+|+|.+|+|||||..++.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred ccEEEEECCCCCCHHHHHHHHhCC
Confidence 457899999999999999999864
No 232
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=89.08 E-value=0.099 Score=44.26 Aligned_cols=22 Identities=32% Similarity=0.412 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||||...+....
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6689999999999999887653
No 233
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=89.05 E-value=0.1 Score=44.50 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=20.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
.-|.++|.+|+|||||+..+....
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSC
T ss_pred eEEEEECCCCcCHHHHHHHHHhCC
Confidence 357899999999999999987643
No 234
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.97 E-value=0.11 Score=45.02 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999998864
No 235
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.92 E-value=0.11 Score=45.43 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=18.8
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||+|...+...
T Consensus 5 iv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999998665
No 236
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.87 E-value=0.098 Score=45.86 Aligned_cols=18 Identities=33% Similarity=0.595 Sum_probs=16.9
Q ss_pred EEEEcCCCCcHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEV 171 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v 171 (679)
|.++|.+|+|||||+..+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 679999999999999988
No 237
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=88.85 E-value=0.075 Score=45.86 Aligned_cols=21 Identities=29% Similarity=0.564 Sum_probs=19.0
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|+|+|.+|+|||||...+...
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999998653
No 238
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=88.77 E-value=0.12 Score=46.87 Aligned_cols=24 Identities=21% Similarity=0.198 Sum_probs=21.6
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
++|+|.|..|+||||+|+.+.+..
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 689999999999999999997754
No 239
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.75 E-value=0.11 Score=44.44 Aligned_cols=22 Identities=36% Similarity=0.468 Sum_probs=19.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||+|++.+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3779999999999999988753
No 240
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.71 E-value=0.11 Score=44.55 Aligned_cols=21 Identities=29% Similarity=0.566 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+.+.
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999888764
No 241
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.65 E-value=0.11 Score=44.66 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.5
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|..|+|||+|++.+.+..
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6799999999999999888753
No 242
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.53 E-value=0.11 Score=44.20 Aligned_cols=22 Identities=32% Similarity=0.593 Sum_probs=19.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||||+..+.++.
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999988753
No 243
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.38 E-value=0.13 Score=44.23 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=19.4
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||||+..+.+..
T Consensus 10 i~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999887643
No 244
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=88.27 E-value=0.091 Score=45.53 Aligned_cols=22 Identities=32% Similarity=0.578 Sum_probs=19.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|+|.+|+|||||...+...
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEEE
T ss_pred eEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999988643
No 245
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.23 E-value=0.12 Score=45.15 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=19.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|.++|.+|+|||+|+..+.+..
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999998887653
No 246
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.97 E-value=0.13 Score=44.20 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=20.0
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|.++|.+|+|||||...+.+..
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999887753
No 247
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=87.94 E-value=0.11 Score=44.75 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=19.8
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|+|.+|+|||||...+...
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999864
No 248
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.77 E-value=0.072 Score=45.56 Aligned_cols=21 Identities=43% Similarity=0.539 Sum_probs=17.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||+|+..+.+.
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 778999999999999887654
No 249
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=87.72 E-value=0.17 Score=46.87 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=22.2
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.+..|+|.+|+||||+|.+++-....
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ia~ 55 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQIAG 55 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 57889999999999999998876543
No 250
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=87.46 E-value=0.14 Score=42.88 Aligned_cols=21 Identities=33% Similarity=0.427 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|+++|.+|+|||||..++...
T Consensus 4 I~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 4 VVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999998754
No 251
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=87.23 E-value=0.16 Score=45.35 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.-|.++|.+|+|||||++.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 35789999999999999988644
No 252
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=87.04 E-value=0.11 Score=44.82 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=18.4
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|.++|.+|+|||||...+...
T Consensus 19 KI~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp EEEEEEETTSSHHHHHHHTCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4669999999999999987543
No 253
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=87.03 E-value=0.15 Score=44.02 Aligned_cols=22 Identities=27% Similarity=0.495 Sum_probs=19.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|+|..|+|||||..++...
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 3789999999999999998864
No 254
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=86.79 E-value=0.2 Score=42.67 Aligned_cols=23 Identities=35% Similarity=0.439 Sum_probs=20.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+-|.|.|.+|+||||+|..+..+
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46889999999999999988765
No 255
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.67 E-value=0.2 Score=42.65 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=20.9
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
....+ |.++|.+|+|||||.+.+.+.
T Consensus 10 ~k~~k-IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 10 NKEMR-ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp TCCEE-EEEEEETTSSHHHHHHHTTCC
T ss_pred CCeEE-EEEECCCCCCHHHHHHHHhcC
Confidence 34455 669999999999999998754
No 256
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.20 E-value=0.11 Score=44.38 Aligned_cols=21 Identities=29% Similarity=0.404 Sum_probs=8.3
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|.++|.+|+|||||+..+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 779999999999999877653
No 257
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=86.14 E-value=0.13 Score=44.39 Aligned_cols=24 Identities=13% Similarity=0.181 Sum_probs=20.4
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~ 173 (679)
+..-|+|+|.+++|||||..++..
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCC
T ss_pred cCCEEEEECCCCCCHHHHHHHHhC
Confidence 456699999999999999988754
No 258
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=85.65 E-value=0.22 Score=42.10 Aligned_cols=23 Identities=39% Similarity=0.468 Sum_probs=20.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+-|.|.|.+|+||||+|.....+
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46889999999999999887776
No 259
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=85.39 E-value=0.2 Score=42.63 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+-|.|.|.+|+||||+|..+..+
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 45789999999999999988764
No 260
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=85.37 E-value=0.26 Score=45.42 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=23.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.|-|+|+|.+|.|||||+-++.....
T Consensus 5 ~iRni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 5 RLRNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp GEEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred hceEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 568899999999999999999876543
No 261
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.45 E-value=0.1 Score=43.90 Aligned_cols=22 Identities=27% Similarity=0.419 Sum_probs=19.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHHh
Q 005747 154 LGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~ 175 (679)
|+++|.+|+|||||+..+....
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998653
No 262
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=83.88 E-value=0.29 Score=45.38 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=20.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.++-+|+|..|+||||+..+++.-
T Consensus 23 ~~ln~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 23 EGINLIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHH
Confidence 357789999999999999988753
No 263
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=83.77 E-value=0.51 Score=45.40 Aligned_cols=61 Identities=15% Similarity=0.016 Sum_probs=36.1
Q ss_pred HHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccC-CCCCeEEEEEcCCCcCHHHHHHHH
Q 005747 139 LNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAEND-KLFDQVVFSEVSESQDIRKIQREI 202 (679)
Q Consensus 139 ~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~-~~F~~~~wv~v~~~~~~~~l~~~i 202 (679)
+..+...+. .++..|.|++|.||||++..+....... ..-...+.+..........+.+.+
T Consensus 154 ~~A~~~al~---~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~ 215 (359)
T d1w36d1 154 KVAAAVALT---RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESL 215 (359)
T ss_dssp HHHHHHHHT---BSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHH
T ss_pred HHHHHHHHc---CCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHHH
Confidence 344444442 3689999999999999887655443211 112335666666554455444444
No 264
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=83.45 E-value=0.52 Score=42.98 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcC--CCccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 137 SILNEITDALKN--GDVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 137 ~~~~~l~~~L~~--~~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
..+.++...+.+ ...-.|.++|..|+|||||...+..+
T Consensus 16 ~~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhcCCCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 334445554542 23346789999999999999999875
No 265
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=82.98 E-value=0.44 Score=43.63 Aligned_cols=24 Identities=33% Similarity=0.580 Sum_probs=20.9
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.|.|+|+|..|.|||||+.++...
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll~~ 25 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALLYK 25 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHHHH
Confidence 478999999999999999988543
No 266
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=81.49 E-value=0.62 Score=40.15 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=29.5
Q ss_pred HHHHHHHhc-CCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 139 LNEITDALK-NGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 139 ~~~l~~~L~-~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+..+..+|. ......+.++|+++.|||++|..+..-..
T Consensus 40 l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~ 78 (205)
T d1tuea_ 40 LGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 78 (205)
T ss_dssp HHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHhC
Confidence 455555665 34567999999999999999999887754
No 267
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=80.40 E-value=0.52 Score=42.04 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=20.6
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
++|+|+|..+.|||||+..+...
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHhh
Confidence 57999999999999999988765
No 268
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=79.96 E-value=1.1 Score=35.91 Aligned_cols=52 Identities=12% Similarity=0.035 Sum_probs=33.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
+.++..|+++.|.|||+++-.++... ..++.+.+....-..+..+.+.+.++
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~~~------~~~vli~~P~~~l~~q~~~~~~~~~~ 58 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYAAQ------GYKVLVLNPSVAATLGFGAYMSKAHG 58 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHHTT------TCCEEEEESCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHc------CCcEEEEcChHHHHHHHHHHHHHHhh
Confidence 45788899999999999987766432 23455555554444444455544443
No 269
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=79.58 E-value=0.23 Score=44.20 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=18.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+...++|.+|+|||||...+..+
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC-
T ss_pred ceEEEECCCCccHHHHHHhhccH
Confidence 45668999999999999988644
No 270
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=79.05 E-value=0.6 Score=44.17 Aligned_cols=28 Identities=29% Similarity=0.428 Sum_probs=23.8
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
+-.|.|-|.=|+||||+++.+.+....+
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred eEEEEEECCccCCHHHHHHHHHHHhccC
Confidence 3468899999999999999999987644
No 271
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=78.51 E-value=0.53 Score=44.51 Aligned_cols=24 Identities=29% Similarity=0.306 Sum_probs=20.9
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.|.|.|..|+||||+.+++.....
T Consensus 168 nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CEEEEeeccccchHHHHHHhhhcc
Confidence 478999999999999999987654
No 272
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=78.41 E-value=0.81 Score=42.96 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=22.2
Q ss_pred EEEEEcCCCCcHHHHHHH-HHHHhccC-CCCCeEEEEEcCC
Q 005747 153 TLGIYGIGGIGKTTLAKE-VARRAEND-KLFDQVVFSEVSE 191 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~-v~~~~~~~-~~F~~~~wv~v~~ 191 (679)
.+.|.|.+|.||||.+.+ +.+-.... ..-..+++++.+.
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~ 66 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN 66 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH
T ss_pred CEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccH
Confidence 366889999999986543 33322211 1123456665554
No 273
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=76.74 E-value=1.1 Score=41.74 Aligned_cols=55 Identities=15% Similarity=0.241 Sum_probs=28.6
Q ss_pred cEEEEEcCCCCcHHHHHH-HHHHHhcc-CCCCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 152 NTLGIYGIGGIGKTTLAK-EVARRAEN-DKLFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~-~v~~~~~~-~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
..+.|.|.+|.||||.+. .+..-... ...-..+.+++.+.. ...++...+.+..+
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn~-a~~~i~~~~~~~~~ 71 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNK-AAREMKERVGQTLG 71 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHH-HHHHHHHHHHHHSC
T ss_pred CCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcHH-HHHHHHHHHHHhcC
Confidence 346789999999998643 33332211 111234666665543 23334444444333
No 274
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=76.54 E-value=0.63 Score=39.63 Aligned_cols=21 Identities=48% Similarity=0.667 Sum_probs=19.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~ 173 (679)
.|+|+|..++|||||..++..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 489999999999999999874
No 275
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=76.07 E-value=0.86 Score=43.22 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=26.4
Q ss_pred HHHHhc-CCCccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 142 ITDALK-NGDVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 142 l~~~L~-~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
+.+++. .+++|-|+|+|-.|.|||||+-.+....
T Consensus 7 ~~~lm~~~~~IRNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 7 MRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp HHHHHHCGGGEEEEEEECCGGGTHHHHHHHHHHHH
T ss_pred HHHHhcCcccCcEEEEEeCCCCcHHHHHHHHHHHC
Confidence 333333 4568889999999999999999887554
No 276
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=76.03 E-value=0.7 Score=43.84 Aligned_cols=22 Identities=27% Similarity=0.329 Sum_probs=19.4
Q ss_pred cEEEEEcCCCCcHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~ 173 (679)
.+..|+|..|+||||+..+++-
T Consensus 24 ~~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 4778999999999999998864
No 277
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.57 E-value=0.91 Score=41.71 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=24.6
Q ss_pred CCCccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 148 NGDVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 148 ~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
++.+.||+|+|+-+.|||||+..++...
T Consensus 29 ~~~v~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 29 TQPMVVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp CSBEEEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHcCCC
Confidence 5568999999999999999999988653
No 278
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=74.67 E-value=0.92 Score=42.78 Aligned_cols=25 Identities=36% Similarity=0.359 Sum_probs=22.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
.|+|-|.=|+||||+++.+.+....
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 4889999999999999999987654
No 279
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=74.19 E-value=1.3 Score=43.09 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 136 MSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 136 ~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
....+.+.++ ......+|.|.|+.|.||||....+.+...
T Consensus 144 ~~~~~~l~~l-~~~~~GliLvtGpTGSGKSTTl~~~l~~~~ 183 (401)
T d1p9ra_ 144 AHNHDNFRRL-IKRPHGIILVTGPTGSGKSTTLYAGLQELN 183 (401)
T ss_dssp HHHHHHHHHH-HTSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-HhhhhceEEEEcCCCCCccHHHHHHhhhhc
Confidence 3444455444 455668999999999999999999888753
No 280
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.70 E-value=0.74 Score=43.49 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=20.1
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
++-+|+|+.|+||||+..++.--
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~ 49 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFV 49 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHH
Confidence 57789999999999999988654
No 281
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=73.05 E-value=0.34 Score=42.16 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=20.7
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
++..|+|+.|+||||+..++.--..
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhc
Confidence 3566899999999999999986543
No 282
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=72.45 E-value=2 Score=39.08 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=28.6
Q ss_pred HHHHHHHhc--CCCccEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 139 LNEITDALK--NGDVNTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 139 ~~~l~~~L~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
...+..+|. .+....+.++|+|+.|||+++..+..-.
T Consensus 90 ~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l 128 (267)
T d1u0ja_ 90 ASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp HHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 344555664 2456789999999999999999998865
No 283
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=70.98 E-value=1.2 Score=38.64 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=19.1
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|+|-.+.|||||+.++...
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHH
Confidence 3899999999999999888644
No 284
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=70.79 E-value=0.97 Score=42.52 Aligned_cols=25 Identities=28% Similarity=0.270 Sum_probs=19.9
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..|+|-|.=|+||||+++.+.+...
T Consensus 5 lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 5 LRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEECSCTTSSHHHHHHHHTC---
T ss_pred eEEEEECCcCCCHHHHHHHHHHHhC
Confidence 4589999999999999999976543
No 285
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.47 E-value=9.2 Score=34.21 Aligned_cols=43 Identities=19% Similarity=0.110 Sum_probs=34.5
Q ss_pred chHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 134 SRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 134 gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+..+.+++|.+.+..+....-.+.|.-|+|||-+|.......-
T Consensus 87 ~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~ 129 (264)
T d1gm5a3 87 AQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY 129 (264)
T ss_dssp HHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHH
Confidence 4666788888888777777778999999999999988776543
No 286
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.88 E-value=1.6 Score=42.52 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=19.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~ 173 (679)
-|+|+|.+|+|||||...+..
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999874
No 287
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=67.77 E-value=1.4 Score=40.40 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=20.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|+|+|.+.+|||||-.++-+..
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~ 26 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAG 26 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC
T ss_pred eEEEECCCCCCHHHHHHHHHCCC
Confidence 48999999999999999988754
No 288
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=63.92 E-value=1.5 Score=40.77 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=19.3
Q ss_pred cEEEEEcCCCCcHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~ 173 (679)
++-+|+|..|+|||++..++.-
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~ 46 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKW 46 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHH
Confidence 4778999999999999988854
No 289
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=61.45 E-value=2.1 Score=39.59 Aligned_cols=22 Identities=27% Similarity=0.632 Sum_probs=20.3
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|+|.+.+|||||-.++.+.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4999999999999999999865
No 290
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=59.88 E-value=8.2 Score=31.16 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=37.0
Q ss_pred ccEEEEEcCCC-CcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHH
Q 005747 151 VNTLGIYGIGG-IGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRL 226 (679)
Q Consensus 151 ~~vi~I~G~gG-iGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l 226 (679)
++-|+|.|-.| ||++||- |.+.... .|..+...+-+ +. +.+.++++.+....-...+......+...+
T Consensus 2 pK~I~IlGsTGSIG~~tL~--Vi~~~~d--~f~v~~lsa~~---N~-~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~ 70 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLD--LIERNLD--RYQVIALTANR---NV-KDLADAAKRTNAKRAVIADPSLYNDLKEAL 70 (150)
T ss_dssp CEEEEEETTTSHHHHHHHH--HHHHTGG--GEEEEEEEESS---CH-HHHHHHHHHTTCSEEEESCGGGHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHH--HHHcCCC--CcEEEEEEeCC---CH-HHHHHHHHhhccccceeccHHHHHHHHHHh
Confidence 47899999998 9999874 4444433 36555543332 33 344455566654433223333333444443
No 291
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=59.61 E-value=4.1 Score=30.21 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=21.4
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
..+-|-++|.||+|.+.||+.+.+.
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE 31 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhC
Confidence 3467889999999999999988765
No 292
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=58.69 E-value=2.1 Score=39.99 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=18.9
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhc
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
|+|+|.+.+|||||-.++-....
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~ 25 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDV 25 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC---
T ss_pred EeEECCCCCCHHHHHHHHHCCCC
Confidence 89999999999999999976543
No 293
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=58.38 E-value=2.3 Score=38.75 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=20.9
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHh
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-.|+|+|++.+|||||+..+....
T Consensus 113 ~~v~vvG~PNvGKSsliN~L~~~~ 136 (273)
T d1puja_ 113 IRALIIGIPNVGKSTLINRLAKKN 136 (273)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTSC
T ss_pred eEEEEEecCccchhhhhhhhhccc
Confidence 458999999999999999998653
No 294
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=58.14 E-value=9.2 Score=32.23 Aligned_cols=20 Identities=35% Similarity=0.285 Sum_probs=15.2
Q ss_pred EEEEcCCCCcHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~ 173 (679)
+.|+++.|.|||.++..+..
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHHH
Confidence 34779999999987665544
No 295
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.04 E-value=2.9 Score=40.57 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=19.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.+-+|+|..|.|||++..++..-
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~ 48 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFV 48 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
Confidence 46779999999999999998653
No 296
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=54.62 E-value=3.3 Score=35.48 Aligned_cols=21 Identities=33% Similarity=0.509 Sum_probs=18.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~ 173 (679)
-|+|+|-.+.|||||+.++..
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 389999999999999998754
No 297
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.22 E-value=4.4 Score=31.32 Aligned_cols=24 Identities=4% Similarity=-0.038 Sum_probs=21.3
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+|.+.|..|.||+|+|.++.....
T Consensus 8 ~i~~tg~~~~gk~~ia~al~~~l~ 31 (122)
T d1g8fa3 8 SIVLGNSLTVSREQLSIALLSTFL 31 (122)
T ss_dssp EEEECTTCCSCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 688999999999999999987764
No 298
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=53.99 E-value=4.3 Score=35.85 Aligned_cols=25 Identities=28% Similarity=0.161 Sum_probs=22.2
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+.+++.|.|+.+.||||+.+.+.--
T Consensus 40 ~~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 40 QRRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CceEEEEeccCchhhHHHHHHHHHH
Confidence 4578999999999999999998865
No 299
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=53.45 E-value=5.1 Score=38.95 Aligned_cols=25 Identities=32% Similarity=0.432 Sum_probs=20.0
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+-+.|+|..|+|||++++.+.....
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~ 75 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGL 75 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHH
Confidence 4478999999999999877665543
No 300
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=52.84 E-value=6 Score=40.50 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=28.0
Q ss_pred EEEEcCCCCcHHHHHHH-HHHHhcc-CCCCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 154 LGIYGIGGIGKTTLAKE-VARRAEN-DKLFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~-v~~~~~~-~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
+.|+|.+|.||||.+-+ +..-... .-..+.++.++.+.. ...++...|.+.++
T Consensus 27 ~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~~-Aa~ei~~Ri~~~l~ 81 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNK-AAREMRERVQSLLG 81 (623)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHH-HHHHHHHHHHHHHG
T ss_pred EEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEeccHH-HHHHHHHHHHHhcc
Confidence 55669999999986644 3332222 112245777765432 23344444444443
No 301
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=50.06 E-value=3.8 Score=37.59 Aligned_cols=18 Identities=39% Similarity=0.733 Sum_probs=15.7
Q ss_pred cEEEEEcCCCCcHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAK 169 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~ 169 (679)
.|-.+.|.+|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 466799999999999984
No 302
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=49.93 E-value=4.1 Score=31.94 Aligned_cols=20 Identities=25% Similarity=-0.064 Sum_probs=15.7
Q ss_pred cEEEEEcCCCCcHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEV 171 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v 171 (679)
+.+.|+++.|.|||..|-..
T Consensus 8 ~~~il~~~tGsGKT~~~~~~ 27 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFLPQ 27 (140)
T ss_dssp CEEEECCCTTSSTTTTHHHH
T ss_pred CcEEEEcCCCCChhHHHHHH
Confidence 56678899999999777543
No 303
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=49.24 E-value=5 Score=35.09 Aligned_cols=23 Identities=26% Similarity=0.242 Sum_probs=19.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHh
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRA 175 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~ 175 (679)
-|+|+|-.+.|||||+.++....
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~~ 27 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDR 27 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHc
Confidence 38899999999999998876544
No 304
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=49.02 E-value=3.7 Score=37.86 Aligned_cols=19 Identities=37% Similarity=0.742 Sum_probs=16.3
Q ss_pred cEEEEEcCCCCcHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKE 170 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~ 170 (679)
.|-.+.|.+|.|||||...
T Consensus 15 ~valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp CEEEEEECTTSCHHHHTCB
T ss_pred CEEEEEccCCCCccccccC
Confidence 5778999999999998853
No 305
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=48.94 E-value=7.7 Score=32.96 Aligned_cols=17 Identities=35% Similarity=0.184 Sum_probs=14.4
Q ss_pred EEEEcCCCCcHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKE 170 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~ 170 (679)
+.|.++.|.|||+.|..
T Consensus 43 ~il~apTGsGKT~~a~l 59 (202)
T d2p6ra3 43 LLLAMPTAAGKTLLAEM 59 (202)
T ss_dssp EEEECSSHHHHHHHHHH
T ss_pred EEEEcCCCCchhHHHHH
Confidence 56899999999998754
No 306
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=48.84 E-value=4.6 Score=34.36 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.4
Q ss_pred EEEEEcCCCCcHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~ 173 (679)
-|+|.|-.+.|||||+.++..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 479999999999999999864
No 307
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=48.06 E-value=18 Score=30.72 Aligned_cols=42 Identities=19% Similarity=0.051 Sum_probs=27.4
Q ss_pred ccchHHHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 132 FESRMSILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 132 ~~gr~~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.-|+-..+.+..++.+ + + ..|+++.|.|||.+|..+.....
T Consensus 69 ~~Lr~yQ~eav~~~~~~-~-~-~ll~~~tG~GKT~~a~~~~~~~~ 110 (206)
T d2fz4a1 69 ISLRDYQEKALERWLVD-K-R-GCIVLPTGSGKTHVAMAAINELS 110 (206)
T ss_dssp CCCCHHHHHHHHHHTTT-S-E-EEEEESSSTTHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHhC-C-C-cEEEeCCCCCceehHHhHHHHhc
Confidence 33455555555555533 2 3 34678999999999988886653
No 308
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=47.82 E-value=17 Score=34.70 Aligned_cols=64 Identities=17% Similarity=0.280 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 137 SILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 137 ~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
+.+++|++-+..+ .+-..|.|..|.|||.++..++..... -+.|-+.+.....++..++..-++
T Consensus 18 ~aI~~l~~~l~~g-~~~q~l~GltGS~ka~~iA~l~~~~~r------p~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 18 QAIAKLVDGLRRG-VKHQTLLGATGTGKTFTISNVIAQVNK------PTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp HHHHHHHHHHHHT-CSEEEEEECTTSCHHHHHHHHHHHHTC------CEEEECSSHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcC-CCcEEEeCCCCcHHHHHHHHHHHHhCC------CEEEEeCCHHHHHHHHHHHHHHcC
Confidence 3478888887644 355668899999999999999987542 234445555556666666655553
No 309
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=47.34 E-value=5.7 Score=34.64 Aligned_cols=25 Identities=20% Similarity=0.130 Sum_probs=20.8
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
--|+|+|-.+.|||||+.++.....
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 3478999999999999999876543
No 310
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=46.70 E-value=33 Score=27.32 Aligned_cols=68 Identities=24% Similarity=0.346 Sum_probs=39.3
Q ss_pred cEEEEEcCCC-CcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhCCCCCccchhHHHHHHHHHHH
Q 005747 152 NTLGIYGIGG-IGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLGLKFDEESESGRARRLHDRLK 227 (679)
Q Consensus 152 ~vi~I~G~gG-iGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~l~~~l~ 227 (679)
+-|+|.|-.| ||++||- |.+... +.|..+.... .+ +. +.+.+.+..+....-...+......+...+.
T Consensus 2 K~I~IlGsTGSIG~~tL~--Vi~~~~--d~f~v~~Lsa-~~--N~-~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~ 70 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLD--VVRHNP--EHFRVVALVA-GK--NV-TRMVEQCLEFSPRYAVMDDEASAKLLKTMLQ 70 (151)
T ss_dssp EEEEEETTTSHHHHHHHH--HHHHCT--TTEEEEEEEE-SS--CH-HHHHHHHHHHCCSEEEESSHHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHH--HHHhCC--CCcEEEEEEe-cC--cH-HHHHHHHHHHhhcccccccHHHHHHHHHHhh
Confidence 4589999988 9999985 334333 3376665543 22 33 4455556666655433344444455555554
No 311
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=45.08 E-value=5 Score=36.93 Aligned_cols=18 Identities=39% Similarity=0.722 Sum_probs=15.5
Q ss_pred cEEEEEcCCCCcHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAK 169 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~ 169 (679)
.+-.+.|.+|.|||||..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 456799999999999994
No 312
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=43.85 E-value=6 Score=33.88 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=18.7
Q ss_pred EEEEEcCCCCcHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVAR 173 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~ 173 (679)
.|+|+|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 489999999999999998864
No 313
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=41.05 E-value=9.8 Score=39.40 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=25.6
Q ss_pred hcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 146 LKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 146 L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.....-+.|.|.|.+|.|||+-++.+.+...
T Consensus 81 ~~~~~~QsIiisGeSGsGKTe~~k~il~yL~ 111 (684)
T d1lkxa_ 81 RQSQENQCVIISGESGAGKTEASKKIMQFLT 111 (684)
T ss_dssp HHHCCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3345567899999999999999999988754
No 314
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=40.33 E-value=10 Score=39.43 Aligned_cols=31 Identities=32% Similarity=0.364 Sum_probs=25.6
Q ss_pred hcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 146 LKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 146 L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+....-+.|.|.|.+|.|||+-++.+.+...
T Consensus 120 ~~~~~nQsIiisGeSGaGKTe~~k~il~yL~ 150 (712)
T d1d0xa2 120 LDDRQNQSLLITGESGAGKTENTKKVIQYLA 150 (712)
T ss_dssp HHHTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHhCCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 3345667999999999999999999988653
No 315
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=39.72 E-value=8.7 Score=33.45 Aligned_cols=23 Identities=26% Similarity=0.234 Sum_probs=20.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+++.|.|+...||||+.+.+.--
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHH
T ss_pred cEEEEECCCccccchhhhhhHHH
Confidence 47899999999999999988765
No 316
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=39.52 E-value=30 Score=32.86 Aligned_cols=64 Identities=16% Similarity=0.246 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcCHHHHHHHHHHHhC
Q 005747 137 SILNEITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQDIRKIQREIADKLG 207 (679)
Q Consensus 137 ~~~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~~~~l~~~i~~~l~ 207 (679)
+.+++|.+.|.++ .+.+.|.|..|.|||-++..++...... + .|-+.+.....++..++..-++
T Consensus 15 ~aI~~l~~~L~~g-~~~~~L~GlsgS~ka~~~A~l~~~~~rp-----~-LvVt~~~~~A~~l~~dL~~~l~ 78 (408)
T d1c4oa1 15 KAIAGLVEALRDG-ERFVTLLGATGTGKTVTMAKVIEALGRP-----A-LVLAPNKILAAQLAAEFRELFP 78 (408)
T ss_dssp HHHHHHHHHHHTT-CSEEEEEECTTSCHHHHHHHHHHHHTCC-----E-EEEESSHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHHHHhCCC-----E-EEEeCCHHHHHHHHHHHHHhcC
Confidence 4488888888754 4667899999999999999998876432 3 3434555556666666655554
No 317
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=38.41 E-value=11 Score=39.13 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=25.8
Q ss_pred hcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 146 LKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 146 L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.....+.|.|.|.+|.|||+-++.+.+...
T Consensus 86 ~~~~~~Q~IiisGeSGaGKTe~~k~il~yL~ 116 (710)
T d1br2a2 86 LQDREDQSILCTGESGAGKTENTKKVIQYLA 116 (710)
T ss_dssp HHHTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3345667899999999999999999988754
No 318
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.30 E-value=9.2 Score=33.65 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=20.3
Q ss_pred EEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 153 TLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
-|+|+|-.+.|||||+-++.....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHcC
Confidence 589999999999999988876543
No 319
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=37.89 E-value=8.1 Score=27.99 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=18.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHH
Q 005747 154 LGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~ 174 (679)
|-++|.||+|-+.||+.+.+.
T Consensus 4 ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEeECHHHHHHHHHHHHhC
Confidence 668899999999999887664
No 320
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=37.19 E-value=7.4 Score=34.46 Aligned_cols=22 Identities=23% Similarity=0.234 Sum_probs=19.2
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-|+|.|-.+.|||||+-++...
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~~ 47 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFL 47 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHHH
T ss_pred EEEEEeeCCCCHHHHHHHHHHH
Confidence 3899999999999999988654
No 321
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=35.88 E-value=18 Score=29.94 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=25.7
Q ss_pred EEEEcCCCCcHHHHHHHHHHHhccCCCCCeEEEEEcCCCcC
Q 005747 154 LGIYGIGGIGKTTLAKEVARRAENDKLFDQVVFSEVSESQD 194 (679)
Q Consensus 154 i~I~G~gGiGKTtLa~~v~~~~~~~~~F~~~~wv~v~~~~~ 194 (679)
+.|.|.++.|||..|...+. .+..+.||--++.+|
T Consensus 2 iLVtGGarSGKS~~AE~l~~------~~~~~~YiAT~~~~D 36 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG------DAPQVLYIATSQILD 36 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC------SCSSEEEEECCCC--
T ss_pred EEEECCCCccHHHHHHHHHh------cCCCcEEEEccCCCC
Confidence 67999999999999988752 245578887666654
No 322
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=35.30 E-value=13 Score=39.18 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=25.3
Q ss_pred hcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 146 LKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 146 L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+....-+.|.|.|.+|.|||+-++.+.+...
T Consensus 118 ~~~~~~QsIiisGeSGaGKTe~~K~il~yL~ 148 (794)
T d2mysa2 118 LTDRENQSILITGESGAGKTVNTKRVIQYFA 148 (794)
T ss_dssp HHHTCCEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHcCCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3345567899999999999999999888754
No 323
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=34.98 E-value=13 Score=31.51 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=23.7
Q ss_pred HHHHhcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 142 ITDALKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 142 l~~~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.+.|...+.++|+|.|. .||||.+..++.-..
T Consensus 5 ~~~~l~~~~~~~iAITGT--nGKTTt~~~l~~iL~ 37 (207)
T d1j6ua3 5 FRDTLKREKKEEFAVTGT--DGKTTTTAMVAHVLK 37 (207)
T ss_dssp HHHHHHHHCCCEEEEECS--SSHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEECC--CCHHHHHHHHHHHHH
Confidence 344455566789999876 569999988877554
No 324
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.65 E-value=20 Score=32.26 Aligned_cols=25 Identities=20% Similarity=0.415 Sum_probs=21.7
Q ss_pred CccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 150 DVNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 150 ~~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
..+-|+|+|--+.|||||..++...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 3456899999999999999999875
No 325
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=34.50 E-value=14 Score=38.95 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=26.1
Q ss_pred HhcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 145 ALKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 145 ~L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
++....-+.|.|.|.+|.|||.-++.+.+...
T Consensus 115 m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 115 MVTDRENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp HHHHTSEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 33355668999999999999999999988754
No 326
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=32.00 E-value=16 Score=37.99 Aligned_cols=31 Identities=26% Similarity=0.274 Sum_probs=25.0
Q ss_pred hcCCCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 146 LKNGDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 146 L~~~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
+.....+.|.|.|.+|.|||+-++.+.+...
T Consensus 89 ~~~~~~Q~IiisGeSGsGKTe~~k~il~~l~ 119 (730)
T d1w7ja2 89 ARDERNQSIIVSGESGAGKTVSAKYAMRYFA 119 (730)
T ss_dssp HHHTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3345567889999999999999999987653
No 327
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=31.13 E-value=22 Score=32.18 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=26.5
Q ss_pred HHHHHHHhc--CCCccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 139 LNEITDALK--NGDVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 139 ~~~l~~~L~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
+.++.+.|. +.+.++|+|.|.. ||||.+..++.-.+.
T Consensus 29 ~~~~l~~lg~P~~~lkvI~VTGTN--GKTSt~~~i~~IL~~ 67 (296)
T d1o5za2 29 ISMLLSKLGNPHLEYKTIHIGGTN--GKGSVANMVSNILVS 67 (296)
T ss_dssp HHHHHHHTTCGGGSSEEEEEECSS--SHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCchhhCCEEEEEecC--cHHHHHHHHHHHHHH
Confidence 556666664 3457888888766 699999998886543
No 328
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=29.47 E-value=24 Score=31.84 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=26.6
Q ss_pred HHHHHHHhc--CCCccEEEEEcCCCCcHHHHHHHHHHHhcc
Q 005747 139 LNEITDALK--NGDVNTLGIYGIGGIGKTTLAKEVARRAEN 177 (679)
Q Consensus 139 ~~~l~~~L~--~~~~~vi~I~G~gGiGKTtLa~~v~~~~~~ 177 (679)
+.++++.|. +...++|+|.|.. ||||.+..+..-...
T Consensus 25 ~~~~l~~lg~P~~~lkvI~VTGTN--GKtST~~~i~~IL~~ 63 (296)
T d2gc6a2 25 ILTLLHALGNPQQQGRYIHVTGTN--GKGSAANAIAHVLEA 63 (296)
T ss_dssp HHHHHHHTTCGGGSSCEEEEECSS--SHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCchhhCCEEEEeccC--cHHHHHHHHHHHHHh
Confidence 455666664 3457888888765 699999998887654
No 329
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=28.74 E-value=29 Score=29.21 Aligned_cols=24 Identities=21% Similarity=0.219 Sum_probs=18.0
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
.++|+|.|. -||||.+..++.-.+
T Consensus 12 ~~~I~ITGT--nGKTTt~~~l~~iL~ 35 (215)
T d1p3da3 12 RHGIAVAGT--HGKTTTTAMISMIYT 35 (215)
T ss_dssp SEEEEEESS--SCHHHHHHHHHHHHH
T ss_pred CCEEEEECC--CCHHHHHHHHHHHHH
Confidence 368888774 579999888876654
No 330
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=28.67 E-value=16 Score=31.51 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=21.6
Q ss_pred CCccEEEEEcCCCCcHHHHHHHHHHHhccC
Q 005747 149 GDVNTLGIYGIGGIGKTTLAKEVARRAEND 178 (679)
Q Consensus 149 ~~~~vi~I~G~gGiGKTtLa~~v~~~~~~~ 178 (679)
.+.+||+|.|.- ||||....++.-.+..
T Consensus 3 ~~~~vI~ITGT~--GKTTt~~~l~~iL~~~ 30 (234)
T d1e8ca3 3 DNLRLVGVTGTN--GKTTTTQLLAQWSQLL 30 (234)
T ss_dssp GSSEEEEEESSS--CHHHHHHHHHHHHHHT
T ss_pred cCCeEEEEECCC--cHHHHHHHHHHHHHHC
Confidence 356788888765 8999999998876543
No 331
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.64 E-value=16 Score=31.80 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=16.5
Q ss_pred EEEEEcCCCCcHHHHHHHHHHH
Q 005747 153 TLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 153 vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
-+.|+++.|.|||+.+....-.
T Consensus 60 ~~~i~apTGsGKT~~~~~~~~~ 81 (237)
T d1gkub1 60 SFAATAPTGVGKTSFGLAMSLF 81 (237)
T ss_dssp CEECCCCBTSCSHHHHHHHHHH
T ss_pred CEEEEecCCChHHHHHHHHHHH
Confidence 3668899999999876655443
No 332
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=27.37 E-value=29 Score=31.30 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=21.3
Q ss_pred ccEEEEEcCCCCcHHHHHHHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
.+-|+|+|.-+.|||||..++...
T Consensus 24 lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 24 LPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCeEEEEeCCCCCHHHHHHHHhCC
Confidence 457899999999999999999864
No 333
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.74 E-value=80 Score=23.86 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=55.0
Q ss_pred cCCCcCHHHHHHHHHHHhCCCC-C-ccchhHHHHHHHHHHHcCCce-EEEEec-CCCccc---hhhcCCCCCCCCCCcEE
Q 005747 189 VSESQDIRKIQREIADKLGLKF-D-EESESGRARRLHDRLKKEKRI-LVILDN-IWGNLD---LKAAGIPHGDDHRGCKV 261 (679)
Q Consensus 189 v~~~~~~~~l~~~i~~~l~~~~-~-~~~~~~~~~~l~~~l~~~k~~-LlVlDd-v~~~~~---~~~l~~~~~~~~~gs~i 261 (679)
|.+.....+++..+++..|... . ..+..+....+.+....+.+| ++++|= +-+.+. ...+..... ....|
T Consensus 7 VDD~~~~~~~l~~~L~~~g~~~v~~a~~g~eAl~~l~~~~~~~~~~dlillD~~mP~~dG~el~~~ir~~~~---~~~pi 83 (128)
T d2r25b1 7 VEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLG---YTSPI 83 (128)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSC---CCSCE
T ss_pred EeCCHHHHHHHHHHHHHcCCeEEEEEcChHHHHHHHHhhhhccCCCCEEEEEeCCCCCCHHHHHHHHHHccC---CCCeE
Confidence 4455667788888998888643 2 233444555555554445556 777772 222222 223322111 12334
Q ss_pred E-EeecCcchh---cccCCCcceEEecCCChHHHHHHHHHH
Q 005747 262 L-LTARSLDTL---STKMDSQKNFSVSFLKEEEAWSLFKKM 298 (679)
Q Consensus 262 i-vTtR~~~v~---~~~~~~~~~~~l~~L~~~e~~~Lf~~~ 298 (679)
| +|+....-. +... ....|-.+|++.++-.+.+.+.
T Consensus 84 I~lT~~~~~~~~~~~~~~-G~~~~l~KP~~~~~L~~~l~~~ 123 (128)
T d2r25b1 84 VALTAFADDSNIKECLES-GMNGFLSKPIKRPKLKTILTEF 123 (128)
T ss_dssp EEEESCCSHHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHc-CCCEEEECCCCHHHHHHHHHHH
Confidence 4 455432211 1112 2346777888887777666554
No 334
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=24.10 E-value=12 Score=27.11 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=16.5
Q ss_pred cEEEEEcCCCCcHHHHHHHHHHH
Q 005747 152 NTLGIYGIGGIGKTTLAKEVARR 174 (679)
Q Consensus 152 ~vi~I~G~gGiGKTtLa~~v~~~ 174 (679)
+-|.|+|+|+.|.++ |+.+.+.
T Consensus 6 K~v~ViGlG~sG~s~-a~~L~~~ 27 (93)
T d2jfga1 6 KNVVIIGLGLTGLSC-VDFFLAR 27 (93)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHT
T ss_pred CEEEEEeECHHHHHH-HHHHHHC
Confidence 347899999999975 6666554
No 335
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.74 E-value=29 Score=31.79 Aligned_cols=29 Identities=28% Similarity=0.324 Sum_probs=22.1
Q ss_pred HHHHHHhcCCCccEEEEEcCCCCcHHHHH
Q 005747 140 NEITDALKNGDVNTLGIYGIGGIGKTTLA 168 (679)
Q Consensus 140 ~~l~~~L~~~~~~vi~I~G~gGiGKTtLa 168 (679)
..+++.+.++.-..|..+|..|.|||.-.
T Consensus 65 ~~lv~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 65 KKIVKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCCCcceeeecccCCCCceec
Confidence 34555555676778889999999999765
No 336
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=20.75 E-value=38 Score=31.36 Aligned_cols=30 Identities=30% Similarity=0.405 Sum_probs=21.9
Q ss_pred HHHHHHHhcCCCccEEEEEcCCCCcHHHHH
Q 005747 139 LNEITDALKNGDVNTLGIYGIGGIGKTTLA 168 (679)
Q Consensus 139 ~~~l~~~L~~~~~~vi~I~G~gGiGKTtLa 168 (679)
...+++.+.++.-..|..+|..|.|||...
T Consensus 68 ~~plv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 68 IKPTVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp THHHHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHhhccCceeEEecccCCCCcceee
Confidence 344555555666677889999999999654
No 337
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=20.17 E-value=59 Score=29.34 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHhcC-CCccEEEEEcCCCCcHHHHHHHHHHHhc
Q 005747 135 RMSILNEITDALKN-GDVNTLGIYGIGGIGKTTLAKEVARRAE 176 (679)
Q Consensus 135 r~~~~~~l~~~L~~-~~~~vi~I~G~gGiGKTtLa~~v~~~~~ 176 (679)
..+.++.+++++.+ ..-..+.++.-+|.|.|+.+..+|.-..
T Consensus 195 ~~~~id~~i~~i~~~~~~~~ivvhc~~g~~rt~~~~~~~~~~~ 237 (313)
T d2pt0a1 195 TPENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLK 237 (313)
T ss_dssp CHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEECCCCCcHHHHHHHHHHHHH
Confidence 45678888888864 3345789999999999999999987654
No 338
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.02 E-value=28 Score=33.57 Aligned_cols=24 Identities=25% Similarity=0.054 Sum_probs=17.4
Q ss_pred ccEEEEEcCCCCcHHHHH-HHHHHH
Q 005747 151 VNTLGIYGIGGIGKTTLA-KEVARR 174 (679)
Q Consensus 151 ~~vi~I~G~gGiGKTtLa-~~v~~~ 174 (679)
.+++.|.+-+|.|||+.+ ..|.+-
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~l 40 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLRL 40 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHHH
Confidence 456788999999999854 444443
Done!