BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005749
(679 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 7/275 (2%)
Query: 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFY 442
++ + +G YK +LADG +A++ L+E + + + H NL+ LR F
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
E+LL+Y Y + ++ L + +P L+W +R +IALG ARGLAYLH + I
Sbjct: 97 MTP-TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 503 THGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSR 562
H +V++ N+L+D+ F + + +FGL +LM A+ G+ APE K S +
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 563 TDVYAFXXXXXXXXXXXXXXXSGR--NGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620
TDV+ + R N + V L VK + E+ + D+++ +
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD 275
Query: 621 PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLE 655
E L+Q +A+ C RP M EVV+ LE
Sbjct: 276 EEVEQLIQ---VALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 7/275 (2%)
Query: 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFY 442
++ + +G YK +LADG +A++ L+E + + + H NL+ LR F
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
E+LL+Y Y + ++ L + +P L+W +R +IALG ARGLAYLH + I
Sbjct: 105 MTP-TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 503 THGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSR 562
H +V++ N+L+D+ F + + +FGL +LM A+ G+ APE K S +
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 563 TDVYAFXXXXXXXXXXXXXXXSGR--NGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620
TDV+ + R N + V L VK + E+ + D+++ +
Sbjct: 224 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD 283
Query: 621 PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLE 655
E L+Q +A+ C RP M EVV+ LE
Sbjct: 284 EEVEQLIQ---VALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQ 443
+I +G YK L DGA +AL+ S + I L RH +L+ L F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 444 GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPIT 503
+R E +LIY Y + L L+ + ++W +R +I +G ARGL YLHT I
Sbjct: 106 -ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AII 161
Query: 504 HGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD-GYKAPELQRMKKCSSR 562
H +V+S N+L+D+ FV ++T+FG+ + + + K GY PE + + +
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 563 TDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPM 622
+DVY+F E V+L + ++ D + IR
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP-- 279
Query: 623 EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLE 655
E L + A+ C A + RP+M +V+ +LE
Sbjct: 280 -ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQ 443
+I +G YK L DGA +AL+ S + I L RH +L+ L F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 444 GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPIT 503
+R E +LIY Y + L L+ + ++W +R +I +G ARGL YLHT I
Sbjct: 106 -ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AII 161
Query: 504 HGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD-GYKAPELQRMKKCSSR 562
H +V+S N+L+D+ FV ++T+FG+ + + + K GY PE + + +
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 563 TDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPM 622
+DVY+F E V+L + ++ D + IR
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP-- 279
Query: 623 EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLE 655
E L + A+ C A + RP+M +V+ +LE
Sbjct: 280 -ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 78 LSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKG 137
LS ++ S P NL +++ L +Q + TG +P L S L SL+L+ N L G
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQ--NNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 138 TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNST 197
TIP LG S L ++ L N+ G + P L +L L N LT +P S
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLEGEI-PQELMYVKTLETLILDFNDLTGEIPSGL---SN 485
Query: 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256
C++L ++ L +N+ +G P+++ R E L L +SNN FSG+IP L SL L+L+ N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 257 NFSGVLP--VFSES-KFGAEVFEG 277
F+G +P +F +S K A G
Sbjct: 546 LFNGTIPAAMFKQSGKIAANFIAG 569
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 71/256 (27%)
Query: 104 IQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVL 163
I L + LTG +P+ +G L L L+ NS G IP ELG SL +DL+ NLF G +
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 164 APSIWNLCDRLVSLRLHG--------------------------------NSLTAALP-- 189
+++ ++ + + G N L+ P
Sbjct: 552 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 190 ----------EPALPNSTCSDLQYLDLGSNKFSG------------------------SF 215
P N+ + +LD+ N SG S
Sbjct: 612 ITSRVYGGHTSPTFDNN--GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 669
Query: 216 PEFVTRFEALKELDISNNLFSGSIPEGLTRLS-LEKLNLSHNNFSGVLPVFSESKFGAEV 274
P+ V L LD+S+N G IP+ ++ L+ L +++LS+NN SG +P + +
Sbjct: 670 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 729
Query: 275 FEGNSPALCGFPLRDC 290
N+P LCG+PL C
Sbjct: 730 KFLNNPGLCGYPLPRC 745
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 110 NLTGSLPRE-LGEFSMLQSLYLNVNSLKGTIPFEL-GYSSSLSEIDLSANLFTGVLAPSI 167
N +G LP + L + L+ L L+ N G +P L S+SL +DLS+N F+G + P
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP-- 383
Query: 168 WNLC----DRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFE 223
NLC + L L L N T +P P L N CS+L L L N SG+ P +
Sbjct: 384 -NLCQNPKNTLQELYLQNNGFTGKIP-PTLSN--CSELVSLHLSFNYLSGTIPSSLGSLS 439
Query: 224 ALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP 263
L++L + N+ G IP+ L + +LE L L N+ +G +P
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 480
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 111 LTGSLPRELGEFSMLQSLYLNVNSLKGTIP-FELGYSSSLSEIDLSANLFTGVLAPSIWN 169
L+G R + + L+ L ++ N G IP L SL + L+ N FTG + +
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL---KSLQYLSLAENKFTGEIPDFLSG 288
Query: 170 LCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKEL 228
CD L L L GN A+P P +CS L+ L L SN FSG P + + + LK L
Sbjct: 289 ACDTLTGLDLSGNHFYGAVP-PFF--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 345
Query: 229 DISNNLFSGSIPEGLTRL--SLEKLNLSHNNFSG-VLP 263
D+S N FSG +PE LT L SL L+LS NNFSG +LP
Sbjct: 346 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 383
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 125 LQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSL 184
L+ L ++ N+ IPF LG S+L +D+S N +G + +I + C L L + N
Sbjct: 199 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI-STCTELKLLNISSNQF 256
Query: 185 TAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVT-RFEALKELDISNNLFSGSIPEGL 243
P P LP LQYL L NKF+G P+F++ + L LD+S N F G++P
Sbjct: 257 VG--PIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Query: 244 -TRLSLEKLNLSHNNFSGVLPV 264
+ LE L LS NNFSG LP+
Sbjct: 312 GSCSLLESLALSSNNFSGELPM 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 28/193 (14%)
Query: 98 SIHLLSIQLPSANLTGSLPR--ELGEFSMLQSLYLNVNSLKGTIPFELGYS---SSLSEI 152
S L S+ L +L+G + LG S L+ +LNV+S P ++ +SL +
Sbjct: 96 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLK--FLNVSSNTLDFPGKVSGGLKLNSLEVL 153
Query: 153 DLSANLFTG--VLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPN--------------- 195
DLSAN +G V+ + + C L L + GN ++ + N
Sbjct: 154 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 213
Query: 196 ---STCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLN 252
CS LQ+LD+ NK SG F ++ LK L+IS+N F G IP L SL+ L+
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYLS 272
Query: 253 LSHNNFSGVLPVF 265
L+ N F+G +P F
Sbjct: 273 LAENKFTGEIPDF 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 125 LQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLF-TGVLAPSIWNLCDRLVSLRLHGNS 183
L+ L ++ N + G + ++ +L +D+S+N F TG+ P + + C L L + GN
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGI--PFLGD-CSALQHLDISGNK 231
Query: 184 LTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGL 243
L+ STC++L+ L++ SN+F G P ++L+ L ++ N F+G IP+ L
Sbjct: 232 LSGDFSRAI---STCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 286
Query: 244 TRL--SLEKLNLSHNNFSGVLPVF 265
+ +L L+LS N+F G +P F
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPPF 310
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLF 159
+L + L +++GS+P E+G+ L L L+ N L G IP + + L+EIDLS N
Sbjct: 654 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 713
Query: 160 TG 161
+G
Sbjct: 714 SG 715
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 78 LSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKG 137
LS ++ S P NL +++ L +Q + TG +P L S L SL+L+ N L G
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQ--NNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 138 TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNST 197
TIP LG S L ++ L N+ G + P L +L L N LT +P S
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEI-PQELMYVKTLETLILDFNDLTGEIPSGL---SN 488
Query: 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256
C++L ++ L +N+ +G P+++ R E L L +SNN FSG+IP L SL L+L+ N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 257 NFSGVLP--VFSES-KFGAEVFEG 277
F+G +P +F +S K A G
Sbjct: 549 LFNGTIPAAMFKQSGKIAANFIAG 572
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 71/256 (27%)
Query: 104 IQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVL 163
I L + LTG +P+ +G L L L+ NS G IP ELG SL +DL+ NLF G +
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 164 APSIWNLCDRLVSLRLHG--------------------------------NSLTAALP-- 189
+++ ++ + + G N L+ P
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 190 ----------EPALPNSTCSDLQYLDLGSNKFSG------------------------SF 215
P N+ + +LD+ N SG S
Sbjct: 615 ITSRVYGGHTSPTFDNN--GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672
Query: 216 PEFVTRFEALKELDISNNLFSGSIPEGLTRLS-LEKLNLSHNNFSGVLPVFSESKFGAEV 274
P+ V L LD+S+N G IP+ ++ L+ L +++LS+NN SG +P + +
Sbjct: 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
Query: 275 FEGNSPALCGFPLRDC 290
N+P LCG+PL C
Sbjct: 733 KFLNNPGLCGYPLPRC 748
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 110 NLTGSLPRE-LGEFSMLQSLYLNVNSLKGTIPFEL-GYSSSLSEIDLSANLFTGVLAPSI 167
N +G LP + L + L+ L L+ N G +P L S+SL +DLS+N F+G + P
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP-- 386
Query: 168 WNLC----DRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFE 223
NLC + L L L N T +P P L N CS+L L L N SG+ P +
Sbjct: 387 -NLCQNPKNTLQELYLQNNGFTGKIP-PTLSN--CSELVSLHLSFNYLSGTIPSSLGSLS 442
Query: 224 ALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP 263
L++L + N+ G IP+ L + +LE L L N+ +G +P
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 111 LTGSLPRELGEFSMLQSLYLNVNSLKGTIP-FELGYSSSLSEIDLSANLFTGVLAPSIWN 169
L+G R + + L+ L ++ N G IP L SL + L+ N FTG + +
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL---KSLQYLSLAENKFTGEIPDFLSG 291
Query: 170 LCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKEL 228
CD L L L GN A+P P +CS L+ L L SN FSG P + + + LK L
Sbjct: 292 ACDTLTGLDLSGNHFYGAVP-PFF--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348
Query: 229 DISNNLFSGSIPEGLTRL--SLEKLNLSHNNFSG-VLP 263
D+S N FSG +PE LT L SL L+LS NNFSG +LP
Sbjct: 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 386
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 125 LQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSL 184
L+ L ++ N+ IPF LG S+L +D+S N +G + +I + C L L + N
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI-STCTELKLLNISSNQF 259
Query: 185 TAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVT-RFEALKELDISNNLFSGSIPEGL 243
P P LP LQYL L NKF+G P+F++ + L LD+S N F G++P
Sbjct: 260 VG--PIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Query: 244 -TRLSLEKLNLSHNNFSGVLPV 264
+ LE L LS NNFSG LP+
Sbjct: 315 GSCSLLESLALSSNNFSGELPM 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 28/193 (14%)
Query: 98 SIHLLSIQLPSANLTGSLPR--ELGEFSMLQSLYLNVNSLKGTIPFELGYS---SSLSEI 152
S L S+ L +L+G + LG S L+ +LNV+S P ++ +SL +
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLK--FLNVSSNTLDFPGKVSGGLKLNSLEVL 156
Query: 153 DLSANLFTG--VLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPN--------------- 195
DLSAN +G V+ + + C L L + GN ++ + N
Sbjct: 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 216
Query: 196 ---STCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLN 252
CS LQ+LD+ NK SG F ++ LK L+IS+N F G IP L SL+ L+
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP-LPLKSLQYLS 275
Query: 253 LSHNNFSGVLPVF 265
L+ N F+G +P F
Sbjct: 276 LAENKFTGEIPDF 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 125 LQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLF-TGVLAPSIWNLCDRLVSLRLHGNS 183
L+ L ++ N + G + ++ +L +D+S+N F TG+ P + + C L L + GN
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGI--PFLGD-CSALQHLDISGNK 234
Query: 184 LTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGL 243
L+ STC++L+ L++ SN+F G P ++L+ L ++ N F+G IP+ L
Sbjct: 235 LSGDFSRAI---STCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 289
Query: 244 TRL--SLEKLNLSHNNFSGVLPVF 265
+ +L L+LS N+F G +P F
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPF 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLF 159
+L + L +++GS+P E+G+ L L L+ N L G IP + + L+EIDLS N
Sbjct: 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716
Query: 160 TG 161
+G
Sbjct: 717 SG 718
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I+ + K +HENL+ L F G+ L L+Y Y P+ +L D L + G P L+W R K
Sbjct: 81 IKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCK 137
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA- 541
IA G A G+ +LH H I H +++S N+L+D+ F +++++FGL + M +
Sbjct: 138 IAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
+ Y APE R + + ++D+Y+F
Sbjct: 195 IVGTTAYMAPEALR-GEITPKSDIYSF 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 21/153 (13%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I+ + K +HENL+ L F G+ L L+Y Y P+ +L D L + G P L+W R K
Sbjct: 81 IKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCK 137
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA- 541
IA G A G+ +LH H I H +++S N+L+D+ F +++++FGL A A E A
Sbjct: 138 IAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGL------ARASEKFAQ 188
Query: 542 ------LAKADGYKAPELQRMKKCSSRTDVYAF 568
+ Y APE R + + ++D+Y+F
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSF 220
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 21/153 (13%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I+ + K +HENL+ L F G+ L L+Y Y P+ +L D L + G P L+W R K
Sbjct: 75 IKVMAKCQHENLVELLGF--SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCK 131
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA- 541
IA G A G+ +LH H I H +++S N+L+D+ F +++++FGL A A E A
Sbjct: 132 IAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGL------ARASEKFAQ 182
Query: 542 ------LAKADGYKAPELQRMKKCSSRTDVYAF 568
+ Y APE R + + ++D+Y+F
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSF 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I+ K +HENL+ L F G+ L L+Y Y P+ +L D L + G P L+W R K
Sbjct: 72 IKVXAKCQHENLVELLGF--SSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCK 128
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA- 541
IA G A G+ +LH H I H +++S N+L+D+ F +++++FGL A A E A
Sbjct: 129 IAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGL------ARASEKFAQ 179
Query: 542 ------LAKADGYKAPELQRMKKCSSRTDVYAF 568
+ Y APE R + + ++D+Y+F
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSF 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 364 IIFQGGEHLTLEDVLNATGQVIEKT---TYGTAYKAKLADGATIALRLLREGS--CKDRS 418
+ FQG D+ + EK ++GT ++A+ G+ +A+++L E + +
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN 79
Query: 419 SCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL---LIYDYFPSRTLHDLLHDTIAGKPVL 475
L + + ++RH N++ + G + ++ +Y +L+ LLH + + L
Sbjct: 80 EFLREVAIMKRLRHPNIV----LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQL 134
Query: 476 NWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535
+ RR +A +A+G+ YLH + PI H N++S N+LVD + ++ +FGL +L
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193
Query: 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
A A + APE+ R + + ++DVY+F
Sbjct: 194 LSSKSA-AGTPEWMAPEVLRDEPSNEKSDVYSF 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 364 IIFQGGEHLTLEDVLNATGQVIEKT---TYGTAYKAKLADGATIALRLLREGS--CKDRS 418
+ FQG D+ + EK ++GT ++A+ G+ +A+++L E + +
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN 79
Query: 419 SCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL---LIYDYFPSRTLHDLLHDTIAGKPVL 475
L + + ++RH N++ + G + ++ +Y +L+ LLH + + L
Sbjct: 80 EFLREVAIMKRLRHPNIV----LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQL 134
Query: 476 NWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535
+ RR +A +A+G+ YLH + PI H +++S N+LVD + ++ +FGL +L
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
A A + APE+ R + + ++DVY+F
Sbjct: 194 LXSKXA-AGTPEWMAPEVLRDEPSNEKSDVYSF 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 48/228 (21%)
Query: 110 NLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWN 169
NL G +P + + + L LY+ ++ G IP L +L +D S N +G L PSI +
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 170 LCDRLVSLRLHGNSLTAALPEP---------------------ALPNSTCSDLQYLDLGS 208
L LV + GN ++ A+P+ P +L ++DL
Sbjct: 148 L-PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206
Query: 209 NKFSGSFPEF-----------------------VTRFEALKELDISNNLFSGSIPEGLTR 245
N G V + L LD+ NN G++P+GLT+
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQ 266
Query: 246 LS-LEKLNLSHNNFSGVLPVFSE-SKFGAEVFEGNSPALCGFPLRDCS 291
L L LN+S NN G +P +F + N LCG PL C+
Sbjct: 267 LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK-CLCGSPLPACT 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 170 LCD------RLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDL----GSNKFSGSFPEFV 219
LCD R+ +L L G +L P P S+ ++L YL+ G N G P +
Sbjct: 42 LCDTDTQTYRVNNLDLSGLNLPKPYPIP----SSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 220 TRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP--VFSESKFGAEVFE 276
+ L L I++ SG+IP+ L+++ +L L+ S+N SG LP + S F+
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 277 GN 278
GN
Sbjct: 158 GN 159
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 31/211 (14%)
Query: 371 HLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV 430
LTLE+++ G +G Y+A G +A++ R +D S + +RQ K+
Sbjct: 8 ELTLEEIIGIGG-------FGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 431 ----RHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIAL 485
+H N+I LR K L+ ++ L+ +L I ++NWA +
Sbjct: 60 FAMLKHPNIIALRGVCL-KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA------V 112
Query: 486 GIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF--------VSRLTEFGLDQLMVPAVAD 537
IARG+ YLH +PI H +++S N+L+ + ++T+FGL +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK- 171
Query: 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
++ A A + APE+ R S +DV+++
Sbjct: 172 --MSAAGAYAWMAPEVIRASMFSKGSDVWSY 200
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 23/189 (12%)
Query: 375 EDVLNATGQVIEKTTYGTAYKAKLAD-GATIALR-LLREGSCKDRSSCLPVIRQLGKVRH 432
++V +VI ++G Y+AKL D G +A++ +L++ K+R L ++R+L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE--LQIMRKLD---H 72
Query: 433 ENLIPLRAFYQGKRGEKLLIY-----DYFPSRTLHDLLHDTIAGK--PVLNWARRHKIAL 485
N++ LR F+ +K ++Y DY P H + A + PV+ + + + L
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL 131
Query: 486 GIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGLDQLMVPAVADEMVALAK 544
R LAY+H+ I H +++ +N+L+D D V +L +FG + +V + V+
Sbjct: 132 --FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXIC 184
Query: 545 ADGYKAPEL 553
+ Y+APEL
Sbjct: 185 SRYYRAPEL 193
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
+V+ + +G KAK +A++ + S +R + + +RQL +V H N++ L Y
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKL---Y 68
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIA--LGIARGLAYLHTGHEI 500
L+ +Y +L+++LH +P+ + H ++ L ++G+AYLH+
Sbjct: 69 GACLNPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 501 PITHGNVRSKN-VLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H +++ N +LV V ++ +FG + M + + APE+
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQTHMTNNKGSAAWMAPEVFEGSNY 181
Query: 560 SSRTDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDM--EIMKG 617
S + DV+++ + I + +E F + + G
Sbjct: 182 SEKCDVFSWG--------------------IILWEVITRRKPFDEIGGPAFRIMWAVHNG 221
Query: 618 IRSPMEEGLVQALK-LAMGCCAPVASVRPTMDEVVK 652
R P+ + L + ++ L C + S RP+M+E+VK
Sbjct: 222 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
+V+ + +G KAK +A++ + S +R + + +RQL +V H N++ L Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKL---Y 67
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIA--LGIARGLAYLHTGHEI 500
L+ +Y +L+++LH +P+ + H ++ L ++G+AYLH+
Sbjct: 68 GACLNPVCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 501 PITHGNVRSKN-VLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H +++ N +LV V ++ +FG + M + + APE+
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFG----TACDIQTHMTNNKGSAAWMAPEVFEGSNY 180
Query: 560 SSRTDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDM--EIMKG 617
S + DV+++ + I + +E F + + G
Sbjct: 181 SEKCDVFSWG--------------------IILWEVITRRKPFDEIGGPAFRIMWAVHNG 220
Query: 618 IRSPMEEGLVQALK-LAMGCCAPVASVRPTMDEVVK 652
R P+ + L + ++ L C + S RP+M+E+VK
Sbjct: 221 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 382 GQVIEKTTYGTAYKAKLAD-GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LR 439
G+V+ K +G A K + G + ++ L + + + L ++ + + H N++ +
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
Y+ KR I +Y TL ++ + P W++R A IA G+AYLH+
Sbjct: 75 VLYKDKRLN--FITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHS--- 126
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMV--PAVADEMVALAKADGYK-------- 549
+ I H ++ S N LV + + +FGL +LMV + + +L K D K
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 550 ---APELQRMKKCSSRTDVYAF 568
APE+ + + DV++F
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSF 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 401 GATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK--LLIYDYF 456
G +A++ L+ C + RS I L + HE++I + + + GEK L+ +Y
Sbjct: 43 GEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQ-GEKSLQLVMEYV 100
Query: 457 PSRTLHDLL-HDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD 515
P +L D L +I +L +A++ I G+AYLH+ H I H N+ ++NVL+D
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHSQHYI---HRNLAARNVLLD 151
Query: 516 DFFVSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAFXXXX 572
+ + ++ +FGL + VP + D + APE + K +DV++F
Sbjct: 152 NDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 573 XXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL-VQALK 631
S +F++L + +A + T + + ++ + +G R P + +
Sbjct: 211 YELLTHCDSSQSPPT-KFLEL---IGIAQGQMTVLRLTEL-LERGERLPRPDKCPCEVYH 265
Query: 632 LAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662
L C AS RPT + ++ L+ + R
Sbjct: 266 LMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 401 GATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK--LLIYDYF 456
G +A++ L+ C + RS I L + HE++I + + + GEK L+ +Y
Sbjct: 43 GEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQ-GEKSLQLVMEYV 100
Query: 457 PSRTLHDLL-HDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD 515
P +L D L +I +L +A++ I G+AYLH H I H N+ ++NVL+D
Sbjct: 101 PLGSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHAQHYI---HRNLAARNVLLD 151
Query: 516 DFFVSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAFXXXX 572
+ + ++ +FGL + VP + D + APE + K +DV++F
Sbjct: 152 NDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 573 XXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL-VQALK 631
S +F++L + +A + T + + ++ + +G R P + +
Sbjct: 211 YELLTHCDSSQSPPT-KFLEL---IGIAQGQMTVLRLTEL-LERGERLPRPDKCPCEVYH 265
Query: 632 LAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662
L C AS RPT + ++ L+ + R
Sbjct: 266 LMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCL--PVIRQLGKVRHENLIPL-- 438
++I + YG YK L D +A+++ S +R + + I ++ + H+N+
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 439 ---RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
R G R E LL+ +Y+P+ +L L + +W ++A + RGLAYLH
Sbjct: 75 GDERVTADG-RMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLH 128
Query: 496 T-----GHEIP-ITHGNVRSKNVLVDDFFVSRLTEFGL------DQLMVPAVADE-MVAL 542
T H P I+H ++ S+NVLV + +++FGL ++L+ P D ++
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 543 AKADGYKAPE-------LQRMKKCSSRTDVYAF 568
Y APE L+ + + D+YA
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 368 GGEHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV--IR 425
G E+L + + +V + +G +KA+L + +A+++ +D+ S +
Sbjct: 15 GTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIF---PIQDKQSWQNEYEVY 70
Query: 426 QLGKVRHENLIPLRAFYQGKRGEKL-----LIYDYFPSRTLHDLLHDTIAGKPVLNWARR 480
L ++HEN+ L+ KRG + LI + +L D L V++W
Sbjct: 71 SLPGMKHENI--LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNEL 123
Query: 481 HKIALGIARGLAYLHT-------GHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
IA +ARGLAYLH GH+ I+H +++SKNVL+ + + + +FGL
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
+ ++RH NL+ L ++G ++ +Y +L D L G+ VL K +L
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLD 125
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
+ + YL + H ++ ++NVLV + V+++++FGL + + D K
Sbjct: 126 VCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVK-- 179
Query: 547 GYKAPELQRMKKCSSRTDVYAF 568
+ APE R KK S+++DV++F
Sbjct: 180 -WTAPEALREKKFSTKSDVWSF 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 383 QVIEKTTYGTAYKAKLADGA-----TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLI 436
+VI +G YK L + +A++ L+ G + K R L +G+ H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L K ++I +Y + L L + VL + GIA G+ YL
Sbjct: 110 RLEGVIS-KYKPMMIITEYMENGALDKFLREKDGEFSVLQLV---GMLRGIAAGMKYLAN 165
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG------YKA 550
+ + H ++ ++N+LV+ V ++++FGL +++ D+ A G + A
Sbjct: 166 MNYV---HRDLAARNILVNSNLVCKVSDFGLSRVL----EDDPEATYTTSGGKIPIRWTA 218
Query: 551 PELQRMKKCSSRTDVYAF 568
PE +K +S +DV++F
Sbjct: 219 PEAISYRKFTSASDVWSF 236
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
+ ++RH NL+ L ++G ++ +Y +L D L G+ VL K +L
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLD 110
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
+ + YL + H ++ ++NVLV + V+++++FGL + + D K
Sbjct: 111 VCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVK-- 164
Query: 547 GYKAPELQRMKKCSSRTDVYAF 568
+ APE R KK S+++DV++F
Sbjct: 165 -WTAPEALREKKFSTKSDVWSF 185
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
+ ++RH NL+ L ++G ++ +Y +L D L G+ VL K +L
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLD 297
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
+ + YL + H ++ ++NVLV + V+++++FGL + + D K
Sbjct: 298 VCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVK-- 351
Query: 547 GYKAPELQRMKKCSSRTDVYAF 568
+ APE R KK S+++DV++F
Sbjct: 352 -WTAPEALREKKFSTKSDVWSF 372
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 368 GGEHLTLEDVLNATGQVIEKT---TYGTAYKAKLADGATIALRLLREGSCKD--RSSCLP 422
G E+L + ++ Q +EK TYG YKAK + G +AL+ +R + + S+ +
Sbjct: 10 GRENLYFQGLMEKY-QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 423 VIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I L ++ H N++ L +R L+ F + L +L + G L ++
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVF--EFMEKDLKKVLDENKTG---LQDSQIKI 123
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEM 539
+ RG+A+ H I H +++ +N+L++ +L +FGL + + V + E+
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 540 VALAKADGYKAPE-LQRMKKCSSRTDVYA 567
V L Y+AP+ L KK S+ D+++
Sbjct: 181 VTL----WYRAPDVLMGSKKYSTSVDIWS 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 368 GGEHLTLEDVLNATGQVIEKT---TYGTAYKAKLADGATIALRLLREGSCKD--RSSCLP 422
G E+L + ++ Q +EK TYG YKAK + G +AL+ +R + + S+ +
Sbjct: 10 GRENLYFQGLMEKY-QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 423 VIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
I L ++ H N++ L +R L+ F + L +L + G L ++
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVF--EFMEKDLKKVLDENKTG---LQDSQIKI 123
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEM 539
+ RG+A+ H I H +++ +N+L++ +L +FGL + + V + E+
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 540 VALAKADGYKAPE-LQRMKKCSSRTDVYAF 568
V L Y+AP+ L KK S+ D+++
Sbjct: 181 VTL----WYRAPDVLMGSKKYSTSVDIWSI 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALR-LLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAF 441
+VI ++G ++AKL + +A++ +L++ K+R L ++R V+H N++ L+AF
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE--LQIMR---IVKHPNVVDLKAF 100
Query: 442 Y--QGKRGEKL---LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
+ G + +++ L+ +Y P T++ K + + R LAY+H+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 497 GHEIPITHGNVRSKNVLVDDFF-VSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
I I H +++ +N+L+D V +L +FG ++++ + V+ + Y+APEL
Sbjct: 160 ---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI--AGEPNVSXICSRYYRAPEL 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 22/262 (8%)
Query: 401 GATIALRLLR-EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPS 458
G +A++ L+ + + RS I L + HE++I + + L L+ +Y P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 459 RTLHDLL-HDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
+L D L +I +L +A++ I G+AYLH H I H ++ ++NVL+D+
Sbjct: 120 GSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHAQHYI---HRDLAARNVLLDND 170
Query: 518 FVSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAFXXXXXX 574
+ ++ +FGL + VP + D + APE + K +DV++F
Sbjct: 171 RLVKIGDFGLAK-AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 575 XXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL-VQALKLA 633
S +F++L + +A + T + + ++ + +G R P + + L
Sbjct: 230 LLTHCDSSQSPPT-KFLEL---IGIAQGQMTVLRLTEL-LERGERLPRPDKCPAEVYHLM 284
Query: 634 MGCCAPVASVRPTMDEVVKQLE 655
C AS RPT + ++ L+
Sbjct: 285 KNCWETEASFRPTFENLIPILK 306
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 401 GATIALRLLREGSCKD-RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK--LLIYDYFP 457
G +A++ L+EG RS I L + HE+++ + + + GEK L+ +Y P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQ-GEKSVQLVMEYVP 96
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
+L D L G A+ A I G+AYLH H I H + ++NVL+D+
Sbjct: 97 LGSLRDYLPRHCVG-----LAQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDND 148
Query: 518 FVSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
+ ++ +FGL + VP + D + APE + K +DV++F
Sbjct: 149 RLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 401 GATIALRLLREGSCKD-RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK--LLIYDYFP 457
G +A++ L+EG RS I L + HE+++ + + + GEK L+ +Y P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQ-GEKSVQLVMEYVP 95
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
+L D L G A+ A I G+AYLH H I H + ++NVL+D+
Sbjct: 96 LGSLRDYLPRHCVG-----LAQLLLFAQQICEGMAYLHAQHYI---HRALAARNVLLDND 147
Query: 518 FVSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
+ ++ +FGL + VP + D + APE + K +DV++F
Sbjct: 148 RLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 15 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH A + + IA ARG+ YLH
Sbjct: 75 GY--STKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK-- 127
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 128 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 559 C---SSRTDVYAF 568
S ++DVYAF
Sbjct: 187 SNPYSFQSDVYAF 199
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
++ + +G +KA+L + +A+++ + S + G ++HENL+ A
Sbjct: 21 EIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPG-MKHENLLQFIA-- 76
Query: 443 QGKRGEKLLIYDYFPSRTLHDL--LHDTIAGKPVLNWARRHKIALGIARGLAYLHT---- 496
KRG L + + + HD L D + G ++ W +A ++RGL+YLH
Sbjct: 77 AEKRGSNLEVELWLIT-AFHDKGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 497 ----GHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
GH+ I H + +SKNVL+ + L +FGL
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL 169
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH A + + IA ARG+ YLH
Sbjct: 87 GY--STKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL-DQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 559 C---SSRTDVYAF 568
S ++DVYAF
Sbjct: 199 SNPYSFQSDVYAF 211
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 111 LTGSLPRELGEFSMLQSLYLNVNSLK--GTIPFELGYSSSLSEIDLSANLFTGVLAPSIW 168
LT ++ G + L++L L +N LK I SL ++D+S N +
Sbjct: 336 LTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395
Query: 169 NLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKEL 228
+ L+SL + N LT + P ++ LDL SNK S P+ V + EAL+EL
Sbjct: 396 SWTKSLLSLNMSSNILTDTIFRCLPPR-----IKVLDLHSNKIK-SIPKQVVKLEALQEL 449
Query: 229 DISNNLFSGSIPEGL-TRL-SLEKLNLSHNNFSGVLP 263
++++N S+P+G+ RL SL+K+ L N + P
Sbjct: 450 NVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
+ ++RH NL+ L ++G ++ +Y +L D L G+ VL K +L
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLD 116
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
+ + YL + H ++ ++NVLV + V+++++FGL + + D K
Sbjct: 117 VCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVK-- 170
Query: 547 GYKAPELQRMKKCSSRTDVYAF 568
+ APE R S+++DV++F
Sbjct: 171 -WTAPEALREAAFSTKSDVWSF 191
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K ++I ++ + +L
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-KSTPVMIITEFMENGSLD 122
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GIA G+ YL ++ H ++ ++N+LV+ V ++
Sbjct: 123 SFLRQNDGQFTVIQLV---GMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKV 176
Query: 523 TEFGLDQLMVPAVADEMVALAKADG----YKAPELQRMKKCSSRTDVYAF 568
++FGL + + +D A + APE + +K +S +DV+++
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSY 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 20 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 76
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 77 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 131
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 132 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 567 AF 568
+F
Sbjct: 189 SF 190
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + RGLAYL H+ I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 175
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y APE + S ++D+++
Sbjct: 176 ---TRSYMAPERLQGTHYSVQSDIWSM 199
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ S L + + K++H+ L+ L A +
Sbjct: 22 FGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSEE--PI 78
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L D G+ L +A +A G+AY+ + I H ++RS
Sbjct: 79 YIVTEYMNKGSLLDFLKDG-EGR-ALKLPNLVDMAAQVAAGMAYIERMNYI---HRDLRS 133
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + + ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 134 ANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 567 AF 568
+F
Sbjct: 191 SF 192
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 22 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 78
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 79 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 133
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 134 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 567 AF 568
+F
Sbjct: 191 SF 192
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVIEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 389 TYGTAYKAKLAD-GATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAFYQGK 445
+YG K + D G +A++ E + + I+ L ++RHENL+ L + K
Sbjct: 37 SYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK 96
Query: 446 RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHG 505
+ L++++ H +L D L++ K I G+ + H+ + I H
Sbjct: 97 K-RWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHR 148
Query: 506 NVRSKNVLVDDFFVSRLTEFGLDQ-LMVPA-VADEMVALAKADGYKAPEL 553
+++ +N+LV V +L +FG + L P V D+ VA Y+APEL
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA---TRWYRAPEL 195
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + ++ + +L+ LH A + + IA ARG+ YLH
Sbjct: 87 GYSTAP--QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL-DQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 559 C---SSRTDVYAF 568
S ++DVYAF
Sbjct: 199 SNPYSFQSDVYAF 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 198 FGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 254
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + H ++R+
Sbjct: 255 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 309
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 310 ANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 567 AFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL 626
+F GR V P +V VL+ ++ +G R P
Sbjct: 367 SF------GILLTELTTKGR----VPYPGMVNREVLD---------QVERGYRMPCPPEC 407
Query: 627 VQALK-LAMGCCAPVASVRPTMDEVVKQLEE 656
++L L C RPT + + LE+
Sbjct: 408 PESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVIEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 21 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 77
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + + H ++R+
Sbjct: 78 XIVTEYMSKGSLLDFLKGE-TGK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 132
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 133 ANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 567 AF 568
+F
Sbjct: 190 SF 191
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 253
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + H ++R+
Sbjct: 254 YIVTEYMSKGSLLDFLKGE-TGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 308
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 567 AFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL 626
+F GR V P +V VL+ ++ +G R P
Sbjct: 366 SF------GILLTELTTKGR----VPYPGMVNREVLD---------QVERGYRMPCPPEC 406
Query: 627 VQALK-LAMGCCAPVASVRPTMDEVVKQLEE 656
++L L C RPT + + LE+
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 24 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 80
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + + H ++R+
Sbjct: 81 YIVTEYMSKGSLLDFLKGE-TGK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 135
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 136 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 567 AF 568
+F
Sbjct: 193 SF 194
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 253
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + H ++R+
Sbjct: 254 YIVTEYMSKGSLLDFLKGE-TGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 308
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 567 AFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL 626
+F GR V P +V VL+ ++ +G R P
Sbjct: 366 SF------GILLTELTTKGR----VPYPGMVNREVLD---------QVERGYRMPCPPEC 406
Query: 627 VQALK-LAMGCCAPVASVRPTMDEVVKQLEE 656
++L L C RPT + + LE+
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVCEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 373 TLEDVLNATGQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQ----- 426
TL D + I K +G +K +L D + +A++ L G + + + ++
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 427 --LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIA 484
+ + H N++ L Y ++ ++ P DL H + + W+ + ++
Sbjct: 75 FIMSNLNHPNIVKL---YGLMHNPPRMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLM 128
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-----FVSRLTEFGLDQLMVPAVADEM 539
L IA G+ Y+ + PI H ++RS N+ + +++ +FGL Q V +V+
Sbjct: 129 LDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS--- 184
Query: 540 VALAKADGYKAPEL--QRMKKCSSRTDVYAF 568
L + APE + + + D Y+F
Sbjct: 185 -GLLGNFQWMAPETIGAEEESYTEKADTYSF 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K ++I ++ + +L
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-KSTPVMIITEFMENGSLD 96
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GIA G+ YL ++ H + ++N+LV+ V ++
Sbjct: 97 SFLRQNDGQFTVIQLV---GMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKV 150
Query: 523 TEFGLDQLMVPAVADEMVALAKADG----YKAPELQRMKKCSSRTDVYAF 568
++FGL + + +D A + APE + +K +S +DV+++
Sbjct: 151 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSY 200
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVMEYMSKGCLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 280 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 336
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + H ++R+
Sbjct: 337 YIVTEYMSKGSLLDFLKGET-GK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 391
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 392 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 567 AFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL 626
+F GR V P +V VL+ ++ +G R P
Sbjct: 449 SF------GILLTELTTKGR----VPYPGMVNREVLD---------QVERGYRMPCPPEC 489
Query: 627 VQALK-LAMGCCAPVASVRPTMDEVVKQLEE 656
++L L C RPT + + LE+
Sbjct: 490 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 76 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 188 KNPYSFQSDVYAF 200
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 71 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 183 KNPYSFQSDVYAF 195
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 73 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 125
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 185 KNPYSFQSDVYAF 197
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 22 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 78
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H N+R+
Sbjct: 79 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRNLRA 133
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 134 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 567 AF 568
+F
Sbjct: 191 SF 192
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 376 DVLNATGQVIEKTTYGTAYKAKLA--DGAT-IALRLLREGSCKDRSSCLPVIRQLGKVRH 432
+V T +++E+ G A + + +G T +A++ L++GS + L + +++H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 67
Query: 433 ENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLA 492
+ L+ L A + +I +Y + +L D L K +N + +A IA G+A
Sbjct: 68 QRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMA 123
Query: 493 YLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPE 552
++ + I H ++R+ N+LV D ++ +FGL +L+ A + APE
Sbjct: 124 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 553 LQRMKKCSSRTDVYAF 568
+ ++DV++F
Sbjct: 181 AINYGTFTIKSDVWSF 196
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 197 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 253
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + +A IA G+AY+ + H ++R+
Sbjct: 254 YIVGEYMSKGSLLDFLKGE-TGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 308
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 309 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 567 AFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGL 626
+F GR V P +V VL+ ++ +G R P
Sbjct: 366 SF------GILLTELTTKGR----VPYPGMVNREVLD---------QVERGYRMPCPPEC 406
Query: 627 VQALK-LAMGCCAPVASVRPTMDEVVKQLEE 656
++L L C RPT + + LE+
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 76 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 188 KNPYSFQSDVYAF 200
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y L D L + GK L + +A IA G+AY+ + + H ++R+
Sbjct: 88 YIVTEYMSKGCLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 98
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H N+ ++N+LV++
Sbjct: 99 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRNLATRNILVENEN 152
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 153 RVKIGDFGLTKVL---PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSF 204
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 432 HENLIPLRAFYQGKRG-EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARG 490
H N++P+ Q LI + P +L+++LH+ V++ ++ K AL +ARG
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF--VVDQSQAVKFALDMARG 123
Query: 491 LAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAK-----A 545
+A+LHT + H + S++V++D+ +R++ +AD + A
Sbjct: 124 MAFLHTLEPLIPRHA-LNSRSVMIDEDMTARIS-----------MADVKFSFQSPGRMYA 171
Query: 546 DGYKAPE-LQRMKKCSSR--TDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVL 602
+ APE LQ+ + ++R D+++F R F DL
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--------REVPFADL--------- 214
Query: 603 EETTMEVFDMEIMKGIRSPMEEGLVQAL-KLAMGCCAPVASVRPTMDEVVKQLEE 656
+ ME+ ++G+R + G+ + KL C + RP D +V LE+
Sbjct: 215 --SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV--RHENLIPLRA 440
+ + K YG ++ G +A+++ S +D S V RHEN++ A
Sbjct: 43 ECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 441 FYQGKR---GEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH-- 495
R + LI Y +L+D L T L+ +I L IA GLA+LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIE 153
Query: 496 ---TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLM 531
T + I H +++SKN+LV + V G + M
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 532 VPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
P V DE + + D YK R D++AF
Sbjct: 214 APEVLDETIQVDCFDSYK------------RVDIWAF 238
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 84
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + ++ IA G+AY+ + + H ++R+
Sbjct: 85 YIVTEYMNKGSLLDFLKGE-TGK-YLRLPQLVDMSAQIASGMAYVERMNYV---HRDLRA 139
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 567 AF 568
+F
Sbjct: 197 SF 198
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 71 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL-DQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 183 KNPYSFQSDVYAF 195
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 38 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 98 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 150
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 210 KNPYSFQSDVYAF 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 104
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 105 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 158
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 159 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 28 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 84
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L GK L + ++ IA G+AY+ + + H ++R+
Sbjct: 85 YIVTEYMNKGSLLDFLKGE-TGK-YLRLPQLVDMSAQIASGMAYVERMNYV---HRDLRA 139
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 140 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 567 AF 568
+F
Sbjct: 197 SF 198
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV--RHENLIPLRA 440
+ + K YG ++ G +A+++ S +D S V RHEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 441 FYQGKR---GEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH-- 495
R + LI Y +L+D L T L+ +I L IA GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIE 124
Query: 496 ---TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLM 531
T + I H +++SKN+LV + V G + M
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 532 VPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
P V DE + + D YK R D++AF
Sbjct: 185 APEVLDETIQVDCFDSYK------------RVDIWAF 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 99 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 211 KNPYSFQSDVYAF 223
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 121
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 122 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 175
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 176 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 224
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV--RHENLIPLRA 440
+ + K YG ++ G +A+++ S +D S V RHEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 441 FYQGKRG---EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH-- 495
R + LI Y +L+D L T L+ +I L IA GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIE 124
Query: 496 ---TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLM 531
T + I H +++SKN+LV + V G + M
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 532 VPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
P V DE + + D YK R D++AF
Sbjct: 185 APEVLDETIQVDCFDSYK------------RVDIWAF 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA D +A+++LR +D S L
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 115
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+L+ ++ +FG+ + A+AD
Sbjct: 116 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR----AIADS 169
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 71 GYSTAP--QLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP-AVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 183 KNPYSFQSDVYAF 195
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G K +A+++++EGS + + + K+ H L+ FY G ++
Sbjct: 21 FGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLV---KFY-GVCSKE 75
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRH----------KIALGIARGLAYLHTGHE 499
IY ++ + I+ +LN+ R H ++ + G+A+L +
Sbjct: 76 YPIY----------IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
I H ++ ++N LVD ++++FG+ + ++ V + APE+ K
Sbjct: 126 I---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 560 SSRTDVYAF 568
SS++DV+AF
Sbjct: 183 SSKSDVWAF 191
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAFY 442
I + TYG YKA+ G T AL+ +R + S+ + I L +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
K+ +L++++ + L LL G L L + G+AY H +
Sbjct: 70 HTKK-RLVLVFEHL-DQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 503 THGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEMVALAKADGYKAPE-LQRMKK 558
H +++ +N+L++ ++ +FGL + + V E+V L Y+AP+ L KK
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL----WYRAPDVLMGSKK 177
Query: 559 CSSRTDVYA 567
S+ D+++
Sbjct: 178 YSTTIDIWS 186
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 82
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 137
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 567 AF 568
+F
Sbjct: 195 SF 196
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 28 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 84
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 85 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 139
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 140 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 567 AF 568
+F
Sbjct: 197 SF 198
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 128
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 129 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 182
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 183 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 234
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 27 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 83
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 84 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 138
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 139 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 567 AF 568
+F
Sbjct: 196 SF 197
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 35 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 91
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 92 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 146
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 147 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 567 AF 568
+F
Sbjct: 204 SF 205
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 98 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 152 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 373 TLEDVLNATGQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQ----- 426
TL D + I K +G +K +L D + +A++ L G + + + ++
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 427 --LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIA 484
+ + H N++ L Y ++ ++ P DL H + + W+ + ++
Sbjct: 75 FIMSNLNHPNIVKL---YGLMHNPPRMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLM 128
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-----FVSRLTEFGLDQLMVPAVADEM 539
L IA G+ Y+ + PI H ++RS N+ + +++ +FG Q V +V+
Sbjct: 129 LDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS--- 184
Query: 540 VALAKADGYKAPEL--QRMKKCSSRTDVYAF 568
L + APE + + + D Y+F
Sbjct: 185 -GLLGNFQWMAPETIGAEEESYTEKADTYSF 214
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAFY 442
I + TYG YKA+ G T AL+ +R + S+ + I L +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
K+ +L++++ + L LL G L L + G+AY H +
Sbjct: 70 HTKK-RLVLVFEHL-DQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 503 THGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEMVALAKADGYKAPE-LQRMKK 558
H +++ +N+L++ ++ +FGL + + V E+V L Y+AP+ L KK
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPDVLMGSKK 177
Query: 559 CSSRTDVYA 567
S+ D+++
Sbjct: 178 YSTTIDIWS 186
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAFY 442
I + TYG YKA+ G T AL+ +R + S+ + I L +++H N++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
K+ +L++++ + L LL G L L + G+AY H +
Sbjct: 70 HTKK-RLVLVFEHL-DQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 503 THGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEMVALAKADGYKAPE-LQRMKK 558
H +++ +N+L++ ++ +FGL + + V E+V L Y+AP+ L KK
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPDVLMGSKK 177
Query: 559 CSSRTDVYA 567
S+ D+++
Sbjct: 178 YSTTIDIWS 186
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 91 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 143
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL-DQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 203 KNPYSFQSDVYAF 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 131
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 132 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 185
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 186 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 82
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 137
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 567 AF 568
+F
Sbjct: 195 SF 196
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 385 IEKTTYGTAYKAKLAD-GATIALR--LLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAF 441
I + +YG +K + D G +A++ L E + L IR L +++H NL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 442 YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIP 501
++ KR L +++Y LH+L G P H + + L ++ H+
Sbjct: 71 FRRKRRLHL-VFEYCDHTVLHEL-DRYQRGVP------EHLVKSITWQTLQAVNFCHKHN 122
Query: 502 ITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
H +V+ +N+L+ V +L +FG +L+ +D Y++PEL
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPEL 173
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLGRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 46/175 (26%)
Query: 408 LLREGSCKDRSSCLPVIRQLGKVRHENLI---------PLRAFYQGKRGEKLLIYDYFPS 458
++RE + ++R +G + E L+ PL F GKR E P
Sbjct: 383 MMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE-------IPV 435
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+ +LLH ++ G+ YL E H N+ ++NVL+ +
Sbjct: 436 SNVAELLHQ-------------------VSMGMKYLE---EKNFVHRNLAARNVLLVNRH 473
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+++++FGL + + AD+ A++ G + APE +K SSR+DV+++
Sbjct: 474 YAKISDFGLSKAL---GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ +A+E V
Sbjct: 111 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVG 168
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 169 ---TRSYMSPERLQGTHYSVQSDIWSM 192
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV--TQEPI 88
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 143
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 567 AF 568
+F
Sbjct: 201 SF 202
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 82
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 137
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 567 AF 568
+F
Sbjct: 195 SF 196
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 34 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV--TQEPI 90
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 91 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 145
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 146 ANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 567 AF 568
+F
Sbjct: 203 SF 204
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 98 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 152 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 31 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 88 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 143 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 104
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 105 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 158
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 159 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 115
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 116 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 169
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 170 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 96
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 97 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 150
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 151 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 202
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 95
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 96 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 149
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 150 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 201
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
GQ I ++GT YK K + + + + + + + L K RH N++
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ + + ++ + +L+ LH I K + IA A+G+ YLH
Sbjct: 99 GY--STKPQLAIVTQWCEGSSLYHHLH-IIETK--FEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL-DQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++S N+ + + ++ +FGL + + + + L+ + + APE+ RM+
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 559 ---CSSRTDVYAF 568
S ++DVYAF
Sbjct: 211 KNPYSFQSDVYAF 223
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 115
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 116 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 169
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 170 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 373 TLEDVLNATGQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQ----- 426
TL D + I K +G +K +L D + +A++ L G + + + ++
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 427 --LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIA 484
+ + H N++ L Y ++ ++ P DL H + + W+ + ++
Sbjct: 75 FIMSNLNHPNIVKL---YGLMHNPPRMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLM 128
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-----FVSRLTEFGLDQLMVPAVADEM 539
L IA G+ Y+ + PI H ++RS N+ + +++ +F L Q V +V+
Sbjct: 129 LDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS--- 184
Query: 540 VALAKADGYKAPEL--QRMKKCSSRTDVYAF 568
L + APE + + + D Y+F
Sbjct: 185 -GLLGNFQWMAPETIGAEEESYTEKADTYSF 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 103
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 104 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 157
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 158 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 100
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 101 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 155 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 102
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 103 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 156
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 157 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
Q I +G + + +A++ +REG+ + + + K+ H L+ L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVC 71
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ L++++ L D L A + +L + L + G+AYL E
Sbjct: 72 L-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLE---E 121
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H ++ ++N LV + V ++++FG+ + ++ + +PE+ +
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 560 SSRTDVYAF 568
SS++DV++F
Sbjct: 182 SSKSDVWSF 190
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 88
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 143
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 144 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 567 AF 568
+F
Sbjct: 201 SF 202
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 36 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV--TQEPI 92
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 93 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 147
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 148 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 567 AF 568
+F
Sbjct: 205 SF 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L+ G+ + L + + K+RHE L+ L A +
Sbjct: 31 FGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSEE--PI 87
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
++ +Y +L D L + GK L + +A IA G+AY+ + + H ++ +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERMNYV---HRDLAA 142
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV + V ++ +FGL +L+ +E A A + APE + + ++DV+
Sbjct: 143 ANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 567 AF 568
+F
Sbjct: 200 SF 201
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLARVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
Q I +G + + +A++ +REG+ + + + K+ H L+ L
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 74
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ L++++ L D L A + +L + L + G+AYL E
Sbjct: 75 L-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLE---E 124
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H ++ ++N LV + V ++++FG+ + ++ + +PE+ +
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 560 SSRTDVYAF 568
SS++DV++F
Sbjct: 185 SSKSDVWSF 193
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE-KLLIYDYFPSRTL 461
+A++ L+ G + + R L +G+ H N+I L RG +++ +Y + +L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV--TRGRLAMIVTEYMENGSL 137
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L ++ + G+ G+ YL ++ H ++ ++NVLVD V +
Sbjct: 138 DTFLRTHDGQFTIMQLV---GMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCK 191
Query: 522 LTEFGLDQLMV--PAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ P A + APE + SS +DV++F
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 364 IIFQGGEHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV 423
++ +G H+ ++ Q I +G + + +A++ ++EGS + +
Sbjct: 14 LVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEE 72
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARR 480
+ K+ H L+ L ++ L++++ L D L A + +L
Sbjct: 73 AEVMMKLSHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG---- 127
Query: 481 HKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540
+ L + G+AYL E + H ++ ++N LV + V ++++FG+ + ++
Sbjct: 128 --MCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
Query: 541 ALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ +PE+ + SS++DV++F
Sbjct: 183 GTKFPVKWASPEVFSFSRYSSKSDVWSF 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 98 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 151
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 152 RVKIGDFGLTKVL---PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 101
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 102 GSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 155
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 156 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + +A++ L++GS + L + +++H+ L+ L A +
Sbjct: 21 FGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQE--PI 77
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + +L D L K +N + +A IA G+A++ + I H ++R+
Sbjct: 78 YIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYI---HRDLRA 132
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDVY 566
N+LV D ++ +FGL +L+ +E A A + APE + ++DV+
Sbjct: 133 ANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 567 AF 568
+F
Sbjct: 190 SF 191
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
Q I +G + + +A++ +REG+ + + + K+ H L+ L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 71
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ L++++ L D L A + +L + L + G+AYL E
Sbjct: 72 L-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLE---E 121
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H ++ ++N LV + V ++++FG+ + ++ + +PE+ +
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 560 SSRTDVYAF 568
SS++DV++F
Sbjct: 182 SSKSDVWSF 190
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA D +A+++LR +D S L
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 115
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+++ ++ +FG+ + A+AD
Sbjct: 116 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR----AIADS 169
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA D +A+++LR +D S L
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 115
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+++ ++ +FG+ + A+AD
Sbjct: 116 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR----AIADS 169
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ +Y P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 100
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L D L A ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 101 GSLRDYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 155 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
Q I +G + + +A++ +REG+ + + + K+ H L+ L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 69
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ L++++ L D L A + +L + L + G+AYL E
Sbjct: 70 L-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLE---E 119
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H ++ ++N LV + V ++++FG+ + ++ + +PE+ +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 560 SSRTDVYAF 568
SS++DV++F
Sbjct: 180 SSKSDVWSF 188
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 38/261 (14%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K +++ +Y + +L
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVT-KSKPVMIVTEYMENGSLD 111
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GI+ G+ YL ++ H ++ ++N+L++ V ++
Sbjct: 112 TFLKKNDGQFTVIQLV---GMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKV 165
Query: 523 TEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAFXXXXXXXX 576
++FGL +++ D+ A G + APE +K +S +DV+++
Sbjct: 166 SDFGLSRVL----EDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIV----- 216
Query: 577 XXXXXXXSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQAL-KLAMG 635
++ S + E T +V + +G R P AL +L +
Sbjct: 217 -------------MWEVVSYGERPYWEMTNQDVIKA-VEEGYRLPSPMDCPAALYQLMLD 262
Query: 636 CCAPVASVRPTMDEVVKQLEE 656
C + RP DE+V L++
Sbjct: 263 CWQKERNSRPKFDEIVNMLDK 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + + +A++ L+ G+ ++ L + ++H+ L+ L A R E
Sbjct: 26 FGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT--REEP 82
Query: 450 L-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+ +I +Y +L D L GK +L + + IA G+AY+ + I H ++R
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYI---HRDLR 137
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
+ NVLV + + ++ +FGL +++ +E A A + APE + ++DV
Sbjct: 138 AANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 566 YAF 568
++F
Sbjct: 195 WSF 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 46/175 (26%)
Query: 408 LLREGSCKDRSSCLPVIRQLGKVRHENLI---------PLRAFYQGKRGEKLLIYDYFPS 458
++RE + ++R +G + E L+ PL F GKR E P
Sbjct: 57 MMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE-------IPV 109
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+ +LLH ++ G+ YL E H ++ ++NVL+ +
Sbjct: 110 SNVAELLHQ-------------------VSMGMKYLE---EKNFVHRDLAARNVLLVNRH 147
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+++++FGL + + AD+ A++ G + APE +K SSR+DV+++
Sbjct: 148 YAKISDFGLSKALG---ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPS 458
G +A++ L+ S + + L I L + HEN++ + G + LI ++ PS
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L + L K +N ++ K A+ I +G+ YL + + H ++ ++NVLV+
Sbjct: 110 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEH 163
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL + + D+ K D + APE K +DV++F
Sbjct: 164 QVKIGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE-KLLIYDYFPSRTL 461
+A++ L+ G + + R L +G+ H N+I L RG +++ +Y + +L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV--TRGRLAMIVTEYMENGSL 137
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L ++ + G+ G+ YL ++ H ++ ++NVLVD V +
Sbjct: 138 DTFLRTHDGQFTIMQLV---GMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCK 191
Query: 522 LTEFGLDQLMV--PAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ P A + APE + SS +DV++F
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 389 TYGTAYKAK-LADGATIALRLLR---EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG 444
++G Y A+ + + +A++ + + S + + +R L K+RH N I R Y
Sbjct: 66 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 125
Query: 445 KRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITH 504
+ L++ S + DLL + KP L + G +GLAYLH+ + I H
Sbjct: 126 EHTAWLVMEYCLGSAS--DLLE--VHKKP-LQEVEIAAVTHGALQGLAYLHSHNMI---H 177
Query: 505 GNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534
+V++ N+L+ + + +L +FG +M PA
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPS 458
G +A++ L+ S + + L I L + HEN++ + G + LI ++ PS
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L + L K +N ++ K A+ I +G+ YL + + H ++ ++NVLV+
Sbjct: 98 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEH 151
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL + + D+ K D + APE K +DV++F
Sbjct: 152 QVKIGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 389 TYGTAYKAK-LADGATIALRLLR---EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG 444
++G Y A+ + + +A++ + + S + + +R L K+RH N I R Y
Sbjct: 27 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86
Query: 445 KRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITH 504
+ L++ S + DLL + KP L + G +GLAYLH+ + I H
Sbjct: 87 EHTAWLVMEYCLGSAS--DLL--EVHKKP-LQEVEIAAVTHGALQGLAYLHSHNMI---H 138
Query: 505 GNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534
+V++ N+L+ + + +L +FG +M PA
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 166 ---TRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 166 ---TRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 170 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 227
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 228 ---TRSYMSPERLQGTHYSVQSDIWSM 251
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 127 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 184
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 185 ---TRSYMSPERLQGTHYSVQSDIWSM 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K ++I +Y + +L
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KCKPVMIITEYMENGSLD 97
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GI G+ YL ++ H ++ ++N+LV+ V ++
Sbjct: 98 AFLRKNDGRFTVIQLV---GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 151
Query: 523 TEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
++FG+ +++ D+ A G + APE +K +S +DV+++
Sbjct: 152 SDFGMSRVL----EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSY 199
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 384 VIEKTTYGTAYKAKLA-DGATI--ALRLLREGSCKDR----SSCLPVIRQLGKVRHENLI 436
VI + +G KA++ DG + A++ ++E + KD + L V+ +LG H N+I
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNII 86
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT----------IAGKPVLNWARRH--KIA 484
L + RG L +Y P L D L + IA + + A
Sbjct: 87 NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
+ARG+ YL I H N+ ++N+LV + +V+++ +FGL +
Sbjct: 146 ADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 135 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 193 ---TRSYMSPERLQGTHYSVQSDIWSM 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 166 ---TRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 166 ---TRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+++ + +GL YL H+I H +V+ N+LV+ +L +FG+ ++ ++A+ V
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 542 LAKADGYKAPELQRMKKCSSRTDVYAF 568
Y +PE + S ++D+++
Sbjct: 166 ---TRSYMSPERLQGTHYSVQSDIWSM 189
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G K +A+++++EGS + + + + + HE L+ L +R
Sbjct: 37 FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PI 94
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + L + L + + + ++ + + YL + H ++ +
Sbjct: 95 FIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAA 148
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+N LV+D V ++++FGL + ++ V + PE+ K SS++D++AF
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K ++I +Y + +L
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KCKPVMIITEYMENGSLD 118
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GI G+ YL ++ H ++ ++N+LV+ V ++
Sbjct: 119 AFLRKNDGRFTVIQLV---GMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKV 172
Query: 523 TEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
++FG+ +++ D+ A G + APE +K +S +DV+++
Sbjct: 173 SDFGMSRVL----EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSY 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 423 VIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHK 482
++RQ+ H ++I L Y+ L++D L D L + +A L+
Sbjct: 152 ILRQVAG--HPHIITLIDSYESS-SFMFLVFDLMRKGELFDYLTEKVA----LSEKETRS 204
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
I + +++LH + I H +++ +N+L+DD RL++FG + P +++ L
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP--GEKLREL 259
Query: 543 AKADGYKAPELQRMKKCS 560
GY APE+ KCS
Sbjct: 260 CGTPGYLAPEIL---KCS 274
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 404 IALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
+A++ L+ G + K R L +G+ H N+I L K ++I +Y + +L
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KCKPVMIITEYMENGSLD 103
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522
L V+ + GI G+ YL ++ H ++ ++N+LV+ V ++
Sbjct: 104 AFLRKNDGRFTVIQLV---GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 157
Query: 523 TEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
++FG+ +++ D+ A G + APE +K +S +DV+++
Sbjct: 158 SDFGMSRVL----EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSY 205
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 40/205 (19%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAF 441
+ I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 442 YQGKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH-- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 158
Query: 496 ---TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLM 531
T + I H +++SKN+LV D ++ G + M
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 532 VPAVADEMVALAKADGYKAPELQRM 556
P V D+ + + + +K ++ M
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAM 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
KIA+ I + L +LH+ ++ + H +V+ NVL++ ++ +FG+ +V +VA + A
Sbjct: 157 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 542 LAKADGYKAPE 552
K Y APE
Sbjct: 215 GCKP--YMAPE 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQ 443
I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADN 68
Query: 444 GKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH---- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHMEIV 122
Query: 496 -TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLMVP 533
T + I H +++SKN+LV D ++ G + M P
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 534 AVADEMVALAKADGYKAPELQRM 556
V D+ + + + +K ++ M
Sbjct: 183 EVLDDSINMKHFESFKRADIYAM 205
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQ 443
I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADN 93
Query: 444 GKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH---- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHMEIV 147
Query: 496 -TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLMVP 533
T + I H +++SKN+LV D ++ G + M P
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 534 AVADEMVALAKADGYKAPELQRM 556
V D+ + + + +K ++ M
Sbjct: 208 EVLDDSINMKHFESFKRADIYAM 230
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQ 443
I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADN 70
Query: 444 GKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH---- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHMEIV 124
Query: 496 -TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLMVP 533
T + I H +++SKN+LV D ++ G + M P
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 534 AVADEMVALAKADGYKAPELQRM 556
V D+ + + + +K ++ M
Sbjct: 185 EVLDDSINMKHFESFKRADIYAM 207
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQ 443
I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADN 73
Query: 444 GKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH---- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHMEIV 127
Query: 496 -TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLMVP 533
T + I H +++SKN+LV D ++ G + M P
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 534 AVADEMVALAKADGYKAPELQRM 556
V D+ + + + +K ++ M
Sbjct: 188 EVLDDSINMKHFESFKRADIYAM 210
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G K +A+++++EGS + + + + + HE L+ L +R
Sbjct: 37 FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PI 94
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I +Y + L + L + + + ++ + + YL + H ++ +
Sbjct: 95 FIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAA 148
Query: 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+N LV+D V ++++FGL + ++ V + PE+ K SS++D++AF
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPV-IRQLGKVRHENLIPLRAFYQ 443
I K +G ++ K G +A+++ S ++RS I Q +RHEN++ A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 444 GKRG---EKLLIYDYFPSRTLHDLLHD-TIAGKPVLNWARRHKIALGIARGLAYLH---- 495
G + L+ DY +L D L+ T+ + ++ K+AL A GLA+LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHMEIV 121
Query: 496 -TGHEIPITHGNVRSKNVLV---------------------DDFFVSRLTEFGLDQLMVP 533
T + I H +++SKN+LV D ++ G + M P
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 534 AVADEMVALAKADGYKAPELQRM 556
V D+ + + + +K ++ M
Sbjct: 182 EVLDDSINMKHFESFKRADIYAM 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
KIA+ I + L +LH+ ++ + H +V+ NVL++ ++ +FG+ +V VA ++ A
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 542 LAKADGYKAPE 552
K Y APE
Sbjct: 171 GCKP--YMAPE 179
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ + + +L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEXMENGSL 104
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 105 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 158
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 159 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
Q I +G + + +A++ +REG+ + + + K+ H L+ L
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 72
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ L+ ++ L D L A + +L + L + G+AYL E
Sbjct: 73 L-EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLE---E 122
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
+ H ++ ++N LV + V ++++FG+ + ++ + +PE+ +
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 560 SSRTDVYAF 568
SS++DV++F
Sbjct: 183 SSKSDVWSF 191
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY-DYFPSRT 460
+A++ L+ G + K R L +G+ H N++ L RG+ ++I ++ +
Sbjct: 73 AVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV--TRGKPVMIVIEFMENGA 130
Query: 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS 520
L L V+ + GIA G+ YL ++ H ++ ++N+LV+ V
Sbjct: 131 LDAFLRKHDGQFTVIQLV---GMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVC 184
Query: 521 RLTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
++++FGL ++ + D+ A+ G + APE + +K +S +DV+++
Sbjct: 185 KVSDFGLSRV----IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSY 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
TGQ +G K +A+++++EGS + + + + + HE L+ L
Sbjct: 24 GTGQ------FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 76
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+R +I +Y + L + L + + + ++ + + YL +
Sbjct: 77 GVCTKQR-PIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ- 131
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
H ++ ++N LV+D V ++++FGL + ++ V + PE+ K
Sbjct: 132 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 560 SSRTDVYAF 568
SS++D++AF
Sbjct: 190 SSKSDIWAF 198
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 23/127 (18%)
Query: 451 LIYDYFPSRTLHDLLH---DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNV 507
L+ P L + +H D I + +LNW + IA+G+ YL E + H ++
Sbjct: 116 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMMYLE---ERRLVHRDL 166
Query: 508 RSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAP------ELQRMKKCSS 561
++NVLV ++T+FGL +L+ DE ADG K P E +K +
Sbjct: 167 AARNVLVKSPNHVKITDFGLARLL---EGDE--KEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 562 RTDVYAF 568
++DV+++
Sbjct: 222 QSDVWSY 228
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
TGQ +G K +A+++++EGS + + + + + HE L+ L
Sbjct: 17 GTGQ------FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 69
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+R +I +Y + L + L + + + ++ + + YL +
Sbjct: 70 GVCTKQRP-IFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ- 124
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
H ++ ++N LV+D V ++++FGL + ++ V + PE+ K
Sbjct: 125 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 560 SSRTDVYAF 568
SS++D++AF
Sbjct: 183 SSKSDIWAF 191
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
TGQ +G K +A+++++EGS + + + + + HE L+ L
Sbjct: 18 GTGQ------FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 70
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+R +I +Y + L + L + + + ++ + + YL +
Sbjct: 71 GVCTKQR-PIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ- 125
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
H ++ ++N LV+D V ++++FGL + ++ V + PE+ K
Sbjct: 126 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 560 SSRTDVYAF 568
SS++D++AF
Sbjct: 184 SSKSDIWAF 192
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 370 EHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK 429
E L LE L A GQ +G + A +A++ ++ GS + L +
Sbjct: 15 ESLKLEKKLGA-GQ------FGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 66
Query: 430 VRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIAR 489
++H+ L+ L A + +I ++ +L D L K L + + IA
Sbjct: 67 LQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAE 122
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD--- 546
G+A++ + I H ++R+ N+LV V ++ +FGL +++ +E A A
Sbjct: 123 GMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPI 176
Query: 547 GYKAPELQRMKKCSSRTDVYAF 568
+ APE + ++DV++F
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSF 198
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
TGQ +G K +A+++++EGS + + + + + HE L+ L
Sbjct: 13 GTGQ------FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 65
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+R +I +Y + L + L + + + ++ + + YL +
Sbjct: 66 GVCTKQRP-IFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ- 120
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559
H ++ ++N LV+D V ++++FGL + ++ V + PE+ K
Sbjct: 121 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 560 SSRTDVYAF 568
SS++D++AF
Sbjct: 179 SSKSDIWAF 187
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 390 YGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK 449
+G + + +A++ L+ G+ ++ L + ++H+ L+ L A K
Sbjct: 25 FGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT-KEEPI 82
Query: 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509
+I ++ +L D L GK +L + + IA G+AY+ + I H ++R+
Sbjct: 83 YIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYI---HRDLRA 137
Query: 510 KNVLVDDFFVSRLTEFGLDQLM 531
NVLV + + ++ +FGL +++
Sbjct: 138 ANVLVSESLMCKIADFGLARVI 159
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ + + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEXMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 23/127 (18%)
Query: 451 LIYDYFPSRTLHDLLH---DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNV 507
L+ P L + +H D I + +LNW + IA+G+ YL E + H ++
Sbjct: 93 LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMMYLE---ERRLVHRDL 143
Query: 508 RSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAP------ELQRMKKCSS 561
++NVLV ++T+FGL +L+ DE ADG K P E +K +
Sbjct: 144 AARNVLVKSPNHVKITDFGLARLL---EGDE--KEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 562 RTDVYAF 568
++DV+++
Sbjct: 199 QSDVWSY 205
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
KIA+ I + L +LH+ ++ + H +V+ NVL++ + +FG+ +V VA ++ A
Sbjct: 140 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 542 LAKADGYKAPE 552
K Y APE
Sbjct: 198 GCKP--YXAPE 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 120/309 (38%), Gaps = 49/309 (15%)
Query: 370 EHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK 429
E L LE L A GQ +G + A +A++ ++ GS + L +
Sbjct: 188 ESLKLEKKLGA-GQ------FGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 239
Query: 430 VRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIAR 489
++H+ L+ L A + +I ++ +L D L K L + + IA
Sbjct: 240 LQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAE 295
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD--- 546
G+A++ + I H ++R+ N+LV V ++ +FGL +++ +E A A
Sbjct: 296 GMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPI 349
Query: 547 GYKAPELQRMKKCSSRTDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETT 606
+ APE + ++DV++F G + P +++
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----PEVIRA------- 397
Query: 607 MEVFDMEIMKGIRSPMEEGLVQAL-KLAMGCCAPVASVRPTMDEVVKQLEENRPRNRSAL 665
+ +G R P E + L + M C RPT + + L++
Sbjct: 398 -------LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD--------F 442
Query: 666 YSPTETRSE 674
Y+ TE++ E
Sbjct: 443 YTATESQXE 451
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 403 TIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461
++A++ L+ G + K R L +G+ H N+I L K +++ + + +L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEXMENGSL 133
Query: 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521
L A V+ + GIA G+ YL ++ H ++ ++N+L++ V +
Sbjct: 134 DSFLRKHDAQFTVIQLV---GMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCK 187
Query: 522 LTEFGLDQLMVPAVADEMVALAKADG------YKAPELQRMKKCSSRTDVYAF 568
+++FGL +++ D+ A G + +PE +K +S +DV+++
Sbjct: 188 VSDFGLSRVL----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYDYFPSR 459
GA +A++ L+ + I+ L + + ++ R G R E L+ +Y PS
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519
L D L A L+ +R + I +G+ YL + H ++ ++N+LV+
Sbjct: 96 CLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 149
Query: 520 SRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +L+ P D V + APE S ++DV++F
Sbjct: 150 VKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 384 VIEKTTYGTAYKAKLA-DGATI--ALRLLREGSCKDR----SSCLPVIRQLGKVRHENLI 436
VI + +G KA++ DG + A++ ++E + KD + L V+ +LG H N+I
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNII 89
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT----------IAGKPVLNWARRH--KIA 484
L + RG L +Y P L D L + IA + + A
Sbjct: 90 NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
+ARG+ YL I H ++ ++N+LV + +V+++ +FGL +
Sbjct: 149 ADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSR 190
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLADG----ATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA +A+++LR +D S L
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 115
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+++ ++ +FG+ + A+AD
Sbjct: 116 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR----AIADS 169
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 384 VIEKTTYGTAYKAKLA-DGATI--ALRLLREGSCKDR----SSCLPVIRQLGKVRHENLI 436
VI + +G KA++ DG + A++ ++E + KD + L V+ +LG H N+I
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNII 79
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT----------IAGKPVLNWARRH--KIA 484
L + RG L +Y P L D L + IA + + A
Sbjct: 80 NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 485 LGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
+ARG+ YL I H ++ ++N+LV + +V+++ +FGL +
Sbjct: 139 ADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA-------F 441
YG Y+ + T+A++ L+E + + L + +++H NL+ L F
Sbjct: 230 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 288
Query: 442 YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIP 501
Y +I ++ L D L + + +N +A I+ + YL + I
Sbjct: 289 Y--------IITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI- 337
Query: 502 ITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKK 558
H N+ ++N LV + + ++ +FGL +LM D A A A + APE K
Sbjct: 338 --HRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 559 CSSRTDVYAF 568
S ++DV+AF
Sbjct: 393 FSIKSDVWAF 402
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLADG----ATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA +A+++LR +D S L
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 132
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+++ ++ +FG+ + A+AD
Sbjct: 133 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR----AIADS 186
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 471 GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530
G P L+ A + IA +A G+AYL E H ++ ++N LV + V ++ +FGL +
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 531 MVPAVADEMVALAKADGYKA-------PELQRMKKCSSRTDVYAF 568
+ A KADG A PE + ++ +DV+A+
Sbjct: 224 IYSA------DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 27/216 (12%)
Query: 369 GEHLTLEDVLNATGQVIEKTTYGTAYKAKLADG----ATIALRLLREGSCKDRSSCLPVI 424
G H+T L+ ++ E +G + LA +A+++LR +D S L
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 425 RQLGKVRHENLIPLRAFYQGKRGEK------LLIYDYFPSRTLHDLLHDTIAGKPVLNWA 478
R+ N + A Y E ++ +Y TL D++H P
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----- 115
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537
+ I + IA L+ H+ I H +V+ N+++ ++ +FG+ + A+AD
Sbjct: 116 -KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR----AIADS 169
Query: 538 -----EMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
+ A+ Y +PE R +R+DVY+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA--FYQGKRGEKLLIYDYFPS 458
G +A++ L+ + + I L ++H+N++ + + G+R KL++ ++ P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPY 100
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF 518
+L + L K ++ + + I +G+ YL T I H ++ ++N+LV++
Sbjct: 101 GSLREYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKRYI---HRDLATRNILVENEN 154
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +++ D+ K G + APE K S +DV++F
Sbjct: 155 RVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 272 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 329
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H N+
Sbjct: 330 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRNLA 384
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 385 ARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 566 YAF 568
+AF
Sbjct: 442 WAF 444
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 432 HENLIPLRAFYQGKRG-EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARG 490
H N++P+ Q LI + P +L+++LH+ V++ ++ K AL ARG
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF--VVDQSQAVKFALDXARG 123
Query: 491 LAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKA 550
A+LHT + H + S++V +D+ +R++ + + + A + A
Sbjct: 124 XAFLHTLEPLIPRHA-LNSRSVXIDEDXTARISXADV------KFSFQSPGRXYAPAWVA 176
Query: 551 PE-LQRMKKCSSR--TDVYAFXXXXXXXXXXXXXXXSGRNGEFVDLPSIVKVAVLEETTM 607
PE LQ+ + ++R D ++F R F DL +
Sbjct: 177 PEALQKKPEDTNRRSADXWSFAVLLWELVT--------REVPFADL-----------SNX 217
Query: 608 EVFDMEIMKGIRSPMEEGLVQAL-KLAMGCCAPVASVRPTMDEVVKQLEE 656
E+ ++G+R + G+ + KL C + RP D +V LE+
Sbjct: 218 EIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H N+ ++N LV + + ++ +FGL +LM D A
Sbjct: 323 MATQISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH 376
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 409 LREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT 468
LRE + K+ + ++R++ H N+I L+ Y+ L++D L D L +
Sbjct: 66 LREATLKE----VDILRKVSG--HPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEK 118
Query: 469 IAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528
+ L+ KI + + LH ++ I H +++ +N+L+DD +LT+FG
Sbjct: 119 VT----LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 529 QLMVPAVADEMVALAKADGYKAPEL 553
+ P +++ ++ Y APE+
Sbjct: 172 CQLDP--GEKLRSVCGTPSYLAPEI 194
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 383 QVIEKTTYGTAYKAKL-ADG---ATIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIP 437
+VI +G + +L A G + +A++ L+ G + + R L +G+ H N+I
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 438 LRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIAL-----GIARGLA 492
L +++ ++ + L L LN + I L GIA G+
Sbjct: 80 LEGVVTNSM-PVMILTEFMENGALDSFLR--------LNDGQFTVIQLVGMLRGIASGMR 130
Query: 493 YLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG----Y 548
YL E+ H ++ ++N+LV+ V ++++FGL + + +D + +
Sbjct: 131 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 549 KAPELQRMKKCSSRTDVYAF 568
APE +K +S +D +++
Sbjct: 188 TAPEAIAFRKFTSASDAWSY 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 88
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 89 FYIIIEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 566 YAF 568
+AF
Sbjct: 201 WAF 203
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 409 LREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT 468
LRE + K+ + ++R++ H N+I L+ Y+ L++D L D L +
Sbjct: 53 LREATLKE----VDILRKVSG--HPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEK 105
Query: 469 IAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528
+ L+ KI + + LH ++ I H +++ +N+L+DD +LT+FG
Sbjct: 106 VT----LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
Query: 529 QLMVPAVADEMVALAKADGYKAPEL 553
+ P +++ + Y APE+
Sbjct: 159 CQLDP--GEKLREVCGTPSYLAPEI 181
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 84
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 85 FYIIIEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 139
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 566 YAF 568
+AF
Sbjct: 197 WAF 199
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 389 TYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
++GT YK K + + + + + + + + L K RH N++ + +
Sbjct: 48 SFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM--TKDN 105
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ + +L+ LH + + IA A+G+ YLH + I H +++
Sbjct: 106 LAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMK 159
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG-YKAPELQRMKK---CSSRTD 564
S N+ + + ++ +FGL + + V + APE+ RM+ S ++D
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 565 VYAF 568
VY++
Sbjct: 220 VYSY 223
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 88
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 89 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 566 YAF 568
+AF
Sbjct: 201 WAF 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 88
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 89 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 566 YAF 568
+AF
Sbjct: 201 WAF 203
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA-------F 441
YG Y+ + T+A++ L+E + + L + +++H NL+ L F
Sbjct: 39 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 97
Query: 442 YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIP 501
Y +I ++ L D L + + +N +A I+ + YL + I
Sbjct: 98 Y--------IITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI- 146
Query: 502 ITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKK 558
H ++ ++N LV + + ++ +FGL +LM D A A A + APE K
Sbjct: 147 --HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 559 CSSRTDVYAF 568
S ++DV+AF
Sbjct: 202 FSIKSDVWAF 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 383 QVIEKTTYGTAYKAKL-ADG---ATIALRLLREG-SCKDRSSCLPVIRQLGKVRHENLIP 437
+VI +G + +L A G + +A++ L+ G + + R L +G+ H N+I
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 438 LRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIAL-----GIARGLA 492
L +++ ++ + L L LN + I L GIA G+
Sbjct: 82 LEGVVTNSM-PVMILTEFMENGALDSFLR--------LNDGQFTVIQLVGMLRGIASGMR 132
Query: 493 YLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD--EMVALAKADG--Y 548
YL E+ H ++ ++N+LV+ V ++++FGL + + +D E +L +
Sbjct: 133 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 549 KAPELQRMKKCSSRTDVYAF 568
APE +K +S +D +++
Sbjct: 190 TAPEAIAFRKFTSASDAWSY 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 137
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + ADEM
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYV 190
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 191 ATRWYRAPEI 200
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 409 LREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDT 468
LRE + K+ + ++R++ H N+I L+ Y+ L++D L D L +
Sbjct: 66 LREATLKE----VDILRKVSG--HPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEK 118
Query: 469 IAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528
+ L+ KI + + LH ++ I H +++ +N+L+DD +LT+FG
Sbjct: 119 VT----LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 529 QLMVPAVADEMVALAKADGYKAPEL 553
+ P +++ + Y APE+
Sbjct: 172 CQLDP--GEKLREVCGTPSYLAPEI 194
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 27 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 84
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 85 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 139
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 566 YAF 568
+AF
Sbjct: 197 WAF 199
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 137
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + ADEM
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYV 190
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 191 ATRWYRAPEI 200
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 137
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + ADEM
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYV 190
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 191 ATRWYRAPEI 200
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 83
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 84 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 138
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 566 YAF 568
+AF
Sbjct: 196 WAF 198
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 31 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 88
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 89 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 566 YAF 568
+AF
Sbjct: 201 WAF 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 30 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 87
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 88 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 142
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 566 YAF 568
+AF
Sbjct: 200 WAF 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 21/191 (10%)
Query: 390 YGTAYKAK-LADGATIALRLLREGSCKDRSSCLPV--------IRQLGKVRHENLIPLRA 440
YGT YKA+ G +AL+ +R + LP+ +R+L H N++ L
Sbjct: 22 YGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMD 81
Query: 441 FYQGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
R ++ L++++ + L L A P L + RGL +LH
Sbjct: 82 VCATSRTDREIKVTLVFEHV-DQDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHA 138
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRM 556
I H +++ +N+LV +L +FGL ++ +A + + Y+APE+
Sbjct: 139 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQ 193
Query: 557 KKCSSRTDVYA 567
++ D+++
Sbjct: 194 STYATPVDMWS 204
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA-------F 441
YG Y+ + T+A++ L+E + + L + +++H NL+ L F
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 442 YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIP 501
Y +I ++ L D L + + +N +A I+ + YL + I
Sbjct: 87 Y--------IITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI- 135
Query: 502 ITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKK 558
H ++ ++N LV + + ++ +FGL +LM D A A A + APE K
Sbjct: 136 --HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 559 CSSRTDVYAF 568
S ++DV+AF
Sbjct: 191 FSIKSDVWAF 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 383 QVIEKTTYGTAYKAK-LADGATIALRLLR--EGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
Q I + ++G A K DG ++ + S K+R + L ++H N++ R
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
++ + G ++ DY DL A K VL + + + LA H H+
Sbjct: 90 ESFE-ENGSLYIVMDYCEG---GDLFKRINAQKGVL-FQEDQILDWFVQICLALKHV-HD 143
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKA----DGYKAPELQR 555
I H +++S+N+ + +L +FG+ +++ + V LA+A Y +PE+
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-----NSTVELARACIGTPYYLSPEICE 198
Query: 556 MKKCSSRTDVYAF 568
K ++++D++A
Sbjct: 199 NKPYNNKSDIWAL 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 26 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 83
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 84 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 138
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 566 YAF 568
+AF
Sbjct: 196 WAF 198
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
YG Y+ + T+A++ L+E + + L + +++H NL+ L +
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPP 85
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+I ++ L D L + + +N +A I+ + YL + I H ++
Sbjct: 86 FYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI---HRDLA 140
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKKCSSRTDV 565
++N LV + + ++ +FGL +LM D A A A + APE K S ++DV
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 566 YAF 568
+AF
Sbjct: 198 WAF 200
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 390 YGTAYKAKLADGA-TIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA-------F 441
YG Y+ + T+A++ L+E + + L + +++H NL+ L F
Sbjct: 28 YGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 442 YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIP 501
Y +I ++ L D L + + +N +A I+ + YL + I
Sbjct: 87 Y--------IITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYLEKKNFI- 135
Query: 502 ITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD---GYKAPELQRMKK 558
H ++ ++N LV + + ++ +FGL +LM D A A A + APE K
Sbjct: 136 --HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 559 CSSRTDVYAF 568
S ++DV+AF
Sbjct: 191 FSIKSDVWAF 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR 439
TGQ +G K +A+++++EGS + + + + + HE L+ L
Sbjct: 18 GTGQ------FGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 70
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+R +I +Y + L + L + + + ++ + + YL +
Sbjct: 71 GVCTKQR-PIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ- 125
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKA----PELQR 555
H ++ ++N LV+D V ++++FGL + V D+ ++ + PE+
Sbjct: 126 --FLHRDLAARNCLVNDQGVVKVSDFGLSRY----VLDDEYTSSRGSKFPVRWSPPEVLM 179
Query: 556 MKKCSSRTDVYAF 568
K SS++D++AF
Sbjct: 180 YSKFSSKSDIWAF 192
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIALGIARGLAYLH 495
L + KL + F S L D + + G P L + + L +GLA+ H
Sbjct: 69 KLLDVIHTE--NKLYLVFEFLSMDLKDFMDASALTGIP-LPLIKSYLFQL--LQGLAFCH 123
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE 552
+ + H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPE 176
Query: 553 -LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 177 ILLGCKYYSTAVDIWS 192
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIALGIARGLAYLH 495
L + KL + F S L D + + G P L + + L +GLA+ H
Sbjct: 68 KLLDVIHTE--NKLYLVFEFLSMDLKDFMDASALTGIP-LPLIKSYLFQL--LQGLAFCH 122
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE 552
+ + H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPE 175
Query: 553 -LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 176 ILLGCKYYSTAVDIWS 191
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSR 459
GA +A++ L+ + I+ L + + ++ R G + L L+ +Y PS
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519
L D L A L+ +R + I +G+ YL + H ++ ++N+LV+
Sbjct: 99 CLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 152
Query: 520 SRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +L+ P D V + APE S ++DV++F
Sbjct: 153 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSR 459
GA +A++ L+ + I+ L + + ++ R G + L L+ +Y PS
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519
L D L A L+ +R + I +G+ YL + H ++ ++N+LV+
Sbjct: 112 CLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 165
Query: 520 SRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +L+ P D V + APE S ++DV++F
Sbjct: 166 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSR 459
GA +A++ L+ + I+ L + + ++ R G + L L+ +Y PS
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519
L D L A L+ +R + I +G+ YL + H ++ ++N+LV+
Sbjct: 100 CLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAH 153
Query: 520 SRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYAF 568
++ +FGL +L+ P D V + APE S ++DV++F
Sbjct: 154 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 50 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 104
Query: 436 IPL-RAFYQGKRGEKLLIYDYFPSRTLHDLLH-------DTIAGKPVLNWARRHKIALGI 487
+ L A G G L+I +Y L + L D G+P+ H + +
Sbjct: 105 VNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH-FSSQV 161
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 162 AQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 198
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 405 ALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462
A++++R+ S S L + L + H N++ L F++ KR L++ Y
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD----DFF 518
+++H + N I + G+ YLH + I H +++ +N+L++ D
Sbjct: 126 EIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDAL 177
Query: 519 VSRLTEFGLDQLMVPAVADEMVALAKADG---YKAPELQRMKKCSSRTDVYA 567
+ ++ +FGL AV + + + G Y APE+ R KK + DV++
Sbjct: 178 I-KIVDFGL-----SAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWS 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 531
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSF 558
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 532
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSF 559
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 114 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTFTAH 167
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 370 EHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK 429
E L LE L A GQ +G + A +A++ ++ GS + L +
Sbjct: 182 ESLKLEKKLGA-GQ------FGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKT 233
Query: 430 VRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIAR 489
++H+ L+ L A + +I ++ +L D L K L + + IA
Sbjct: 234 LQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAE 289
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYK 549
G+A++ + I H ++R+ N+LV V ++ +FGL + V +
Sbjct: 290 GMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLAR----------VGAKFPIKWT 336
Query: 550 APELQRMKKCSSRTDVYAF 568
APE + ++DV++F
Sbjct: 337 APEAINFGSFTIKSDVWSF 355
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 44/215 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 40 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 94
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTLHDLLHDTIAGKPVLNWA 478
+ PL + + L Y ++ P +T DL D + + ++ ++
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538
+A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + + +
Sbjct: 155 ------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIXKD 201
Query: 539 MVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ K D + APE + + ++DV++F
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 58 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 112
Query: 436 IPL-RAFYQGKRGEKLLIYDYFPSRTLHDLLH-------DTIAGKPVLNWARRHKIALGI 487
+ L A G G L+I +Y L + L D G+P+ H + +
Sbjct: 113 VNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH-FSSQV 169
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 170 AQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 390 YGTAYKAKLADGATIA----LRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAFYQ 443
+ T YKA+ + I ++L KD + L I+ L ++ H N+I L +
Sbjct: 23 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF- 81
Query: 444 GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPIT 503
G + L++D+ + L ++ D VL + L +GL YLH I
Sbjct: 82 GHKSNISLVFDFMET-DLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQHW---IL 134
Query: 504 HGNVRSKNVLVDDFFVSRLTEFGLDQ-LMVPAVADEMVALAKADGYKAPEL 553
H +++ N+L+D+ V +L +FGL + P A + + Y+APEL
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR--WYRAPEL 183
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 389 TYGTAYKAK-LADGATIALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
YGT YKA+ G +AL+ +R EG + ++R+L H N++ L
Sbjct: 16 AYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVC 75
Query: 443 QGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH 498
R ++ L++++ + L L A P L + RGL +LH
Sbjct: 76 ATSRTDREIKVTLVFEHV-DQDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 499 EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++ +N+LV +L +FGL ++ +A + V + Y+APE+
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL--WYRAPEVLLQST 187
Query: 559 CSSRTDVYA 567
++ D+++
Sbjct: 188 YATPVDMWS 196
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460
G AL+ +++ SS I L K++HEN++ L Y+ S T
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE--------------STT 79
Query: 461 LHDLLHDTIAGKPVLNWARRHKI------ALGIARGLAYLHTGHEIPITHGNVRSKNVLV 514
+ L+ ++G + + + +L I + L+ + HE I H +++ +N+L
Sbjct: 80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLY 139
Query: 515 ---DDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYA 567
++ +T+FGL ++ + M GY APE+ K S D ++
Sbjct: 140 LTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWS 192
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 114 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAH 167
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 169
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSF 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 167
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSF 194
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 173
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSF 200
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 116 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAH 169
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 116 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAH 169
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 187
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSF 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 121 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAH 174
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K S +D++A
Sbjct: 198 AQ---YVSPELLTEKSASKSSDLWA 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 114 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAH 167
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 116 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAH 169
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENXYKAQTH 173
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSF 200
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 483 IALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542
+A I+ + YL + I H ++ ++N LV + + ++ +FGL +LM D A
Sbjct: 116 MATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAH 169
Query: 543 AKAD---GYKAPELQRMKKCSSRTDVYAF 568
A A + APE K S ++DV+AF
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 179
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSF 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 389 TYGTAYKA-KLADGATIALRLLREGSCKDR-SSCLPVIRQLGKVRHENLIPLRAFYQGKR 446
TY T YK G +AL+ ++ S + S+ + I + +++HEN++ L +
Sbjct: 17 TYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE- 75
Query: 447 GEKLLIYDYFPSRTLHDLLHDTIAGKP---VLNWARRHKIALGIARGLAYLHTGHEIPIT 503
+ L++++ + + T+ P LN + + L +GLA+ H E I
Sbjct: 76 NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCH---ENKIL 130
Query: 504 HGNVRSKNVLVDDFFVSRLTEFGLDQ---LMVPAVADEMVALAKADGYKAPE-LQRMKKC 559
H +++ +N+L++ +L +FGL + + V + E+V L Y+AP+ L +
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW----YRAPDVLMGSRTY 186
Query: 560 SSRTDVYA 567
S+ D+++
Sbjct: 187 STSIDIWS 194
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 189
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSF 216
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
++ G+ YL E H ++ ++NVL+ +++++FGL + + ADE A+
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTH 189
Query: 547 G-----YKAPELQRMKKCSSRTDVYAF 568
G + APE K SS++DV++F
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSF 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 135
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYV 188
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 189 ATRWYRAPEI 198
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 135
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYV 188
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 189 ATRWYRAPEI 198
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIALGIARGLAYLH 495
L + KL + F + L D + + G P L + + L +GLA+ H
Sbjct: 66 KLLDVIHTE--NKLYLVFEFLHQDLKDFMDASALTGIP-LPLIKSYLFQL--LQGLAFCH 120
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE 552
+ + H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPE 173
Query: 553 -LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 ILLGCKYYSTAVDIWS 189
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 141
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 142 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYV 194
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 195 ATRWYRAPEI 204
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGL----CRHTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 142
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 195
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 196 ATRWYRAPEI 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 142
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 195
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 196 ATRWYRAPEI 205
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 132
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 185
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 186 ATRWYRAPEI 195
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 142
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 143 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 195
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 196 ATRWYRAPEI 205
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 401 GATIALRLLREGSCKDRS---SCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
GA A++++++ S S + L + L ++ H N++ L F++ KR L++ Y
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-- 515
L D I + + I + G YLH + I H +++ +N+L++
Sbjct: 106 GE-----LFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESK 157
Query: 516 --DFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYA 567
D + ++ +FGL V +M Y APE+ R KK + DV++
Sbjct: 158 SRDALI-KIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWS 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 389 TYGTAYKAK-LADGATIALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
YGT YKA+ G +AL+ +R EG + ++R+L H N++ L
Sbjct: 16 AYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVC 75
Query: 443 QGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH 498
R ++ L++++ + L L A P L + RGL +LH
Sbjct: 76 ATSRTDREIKVTLVFEHV-DQDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 499 EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++ +N+LV +L +FGL ++ +A + + Y+APE+
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LFPVVVTLWYRAPEVLLQST 187
Query: 559 CSSRTDVYA 567
++ D+++
Sbjct: 188 YATPVDMWS 196
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 389 TYGTAYKAK-LADGATIALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
YGT YKA+ G +AL+ +R EG + ++R+L H N++ L
Sbjct: 16 AYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVC 75
Query: 443 QGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH 498
R ++ L++++ + L L A P L + RGL +LH
Sbjct: 76 ATSRTDREIKVTLVFEHV-DQDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 499 EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKK 558
I H +++ +N+LV +L +FGL ++ +A + + Y+APE+
Sbjct: 133 ---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVVVTLWYRAPEVLLQST 187
Query: 559 CSSRTDVYA 567
++ D+++
Sbjct: 188 YATPVDMWS 196
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 132
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 185
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 186 ATRWYRAPEI 195
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 137
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 138 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 190
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 191 ATRWYRAPEI 200
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 126
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 127 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFV 179
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 180 ATRWYRAPEI 189
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 401 GATIALRLLREGSCKDRSSC---LPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
GA A++++++ S S+ L + L ++ H N++ L F++ KR L++ Y
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-- 515
L D I + + I + G YLH + I H +++ +N+L++
Sbjct: 89 GE-----LFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESK 140
Query: 516 --DFFVSRLTEFGLD-QLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYA 567
D + ++ +FGL V E + A Y APE+ R KK + DV++
Sbjct: 141 SRDALI-KIVDFGLSAHFEVGGKMKERLGTAY---YIAPEVLR-KKYDEKCDVWS 190
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 135
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 136 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 188
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 189 ATRWYRAPEI 198
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 136
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 137 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 189
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 190 ATRWYRAPEI 199
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 71 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 129
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 130 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 182
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 183 ATRWYRAPEI 192
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 153
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 154 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 206
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 207 ATRWYRAPEI 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 424 IRQLGKVRHENLIPLRAFY---QGKRGEKLLIYDYFPSRTLHDLLHDT-IAGKPVLNWAR 479
I Q +RHEN++ A G + LI DY + +L+D L T + K +L
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML---- 137
Query: 480 RHKIALGIARGLAYLHTGHEI-------PITHGNVRSKNVLVDDFFVSRLTEFGL 527
K+A GL +LHT EI I H +++SKN+LV + + GL
Sbjct: 138 --KLAYSSVSGLCHLHT--EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 132
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 133 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 185
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 186 ATRWYRAPEI 195
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 150
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 151 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 203
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 204 ATRWYRAPEI 213
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 135
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 136 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 188
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 189 ATRWYRAPEI 198
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 126
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 127 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 179
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 180 ATRWYRAPEI 189
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 141
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 142 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 194
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 195 ATRWYRAPEI 204
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 127
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 128 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 180
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 181 ATRWYRAPEI 190
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 127
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 128 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 180
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 181 ATRWYRAPEI 190
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 132
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 133 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYV 185
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 186 ATRWYRAPEI 195
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 153
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 154 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYV 206
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 207 ATRWYRAPEI 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 136
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 137 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYV 189
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 190 ATRWYRAPEI 199
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 70 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 128
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 129 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 181
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 182 ATRWYRAPEI 191
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 130
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 131 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 183
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 184 ATRWYRAPEI 193
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 149
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 150 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 202
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 203 ATRWYRAPEI 212
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 150
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 151 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 203
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 204 ATRWYRAPEI 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 126
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 127 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 179
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 180 ATRWYRAPEI 189
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 384 VIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
V+ + +G KA+ A D A++ +R K S+ L + L + H+ ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 443 QGKRG---------EKLLIY---DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARG 490
+R +K ++ +Y +RTL+DL+H + + R + I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR---LFRQILEA 128
Query: 491 LAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
L+Y+H+ I H N++ N+ +D+ ++ +FGL
Sbjct: 129 LSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGL 162
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 82 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 140
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 141 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 193
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 194 ATRWYRAPEI 203
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 149
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 150 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 202
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 203 ATRWYRAPEI 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHD---TIAGKPVLNWARRHKI 483
+G + H +++ L G + L+ Y P +L D + + + +LNW
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQ--LVTQYLPLGSLLDHVRQHRGALGPQLLLNWG----- 121
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
+ IA+G+ YL E + H N+ ++NVL+ ++ +FG+ L+ P + + A
Sbjct: 122 -VQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 544 KAD-GYKAPELQRMKKCSSRTDVYAF 568
K + A E K + ++DV+++
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSY 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 37/169 (21%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 58 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 112
Query: 436 IPL-RAFYQGKRGEKLLIYDYF-----------PSRTLHD-----LLHDTIAGKPVLNWA 478
+ L A G G L+I +Y SR L + + T++ + +L+++
Sbjct: 113 VNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+ +A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 171 SQ------VAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 474 VLNWARRHKIALG----------IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLT 523
+L+ R+H+ ALG IA+G+ YL E + H N+ ++NVL+ ++
Sbjct: 119 LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVA 175
Query: 524 EFGLDQLMVPAVADEMVALAKAD-GYKAPELQRMKKCSSRTDVYAF 568
+FG+ L+ P + + AK + A E K + ++DV+++
Sbjct: 176 DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 391 GTAYKA-KLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LRAFYQGKRGE 448
GT Y A +A G +A+R + + + I + + ++ N++ L ++ G E
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--E 92
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ +Y +L D++ +T ++ + + + L +LH+ + H N++
Sbjct: 93 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIK 144
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
S N+L+ +LT+FG + P + + + APE+ K + D+++
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 469 IAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528
+ + +LNW + IA+G++YL ++ + H ++ ++NVLV ++T+FGL
Sbjct: 116 LGSQDLLNWC------MQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
Query: 529 QLMVPAVADEMVALAKADGYKAP------ELQRMKKCSSRTDVYAF 568
+L+ D ADG K P E ++ + ++DV+++
Sbjct: 167 RLL-----DIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSY 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 163 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATR 215
Query: 547 GYKAPEL 553
Y+APE+
Sbjct: 216 WYRAPEI 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 150
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 151 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXV 203
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 204 ATRWYRAPEI 213
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 381 TGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA 440
TGQ + A+ D T A R LRE ++ L +H+N+I ++
Sbjct: 79 TGQQVAIKKIPNAF-----DVVTNAKRTLRE------------LKILKHFKHDNIIAIKD 121
Query: 441 FYQ-----GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
+ G+ ++ D S LH ++H + +P+ R+ + + RGL Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSS---QPLTLEHVRYFL-YQLLRGLKYMH 176
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE---MVALAKADGYKAPE 552
+ + H +++ N+LV++ ++ +FG+ + + + A+ M Y+APE
Sbjct: 177 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 553 L 553
L
Sbjct: 234 L 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 136
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 137 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 189
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 190 ATRWYRAPEI 199
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 389 TYGTAYK--AKLADGATIALRLLR-EGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK 445
TY T YK +KL D +AL+ +R E + + + L ++H N++ L +
Sbjct: 14 TYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE 72
Query: 446 RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHG 505
+ L+++Y + L L D ++N + RGLAY H + H
Sbjct: 73 KS-LTLVFEYL-DKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHR 124
Query: 506 NVRSKNVLVDDFFVSRLTEFGL 527
+++ +N+L+++ +L +FGL
Sbjct: 125 DLKPQNLLINERGELKLADFGL 146
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLV-DDFFVSRLTEFGLDQLMVP-AVADEMVA---LAK 544
GL YLHT I HG+V++ NVL+ D + L +FG + P + ++ +
Sbjct: 162 GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 545 ADGYKAPELQRMKKCSSRTDVYA 567
+ + APE+ K C ++ D+++
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWS 241
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLV-DDFFVSRLTEFGLDQLMVP-AVADEMVA---LAK 544
GL YLHT I HG+V++ NVL+ D + L +FG + P + ++ +
Sbjct: 176 GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 545 ADGYKAPELQRMKKCSSRTDVYA 567
+ + APE+ K C ++ D+++
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWS 255
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483
+R L ++HEN+I L + R + Y + + L++ + + + + +
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFL 136
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 137 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 189
Query: 544 KADGYKAPEL 553
Y+APE+
Sbjct: 190 ATRWYRAPEI 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 385 IEKTTYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAF 441
I + T+G +KA+ G +AL+ + + K+ + L I+ L ++HEN++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 442 YQGK-------RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494
+ K +G L++D F L LL + + + R ++ L GL Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFD-FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 495 HTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
H I H ++++ NVL+ V +L +FGL
Sbjct: 142 HRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
K+ + I + L YL H + H +V+ N+L+D+ +L +FG+ +V A + A
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 542 LAKADGYKAPE 552
A Y APE
Sbjct: 186 GCAA--YMAPE 194
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMF 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 13 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 72
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 73 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 128
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 181
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 182 LLGXKYYSTAVDIWS 196
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 199 SDLQYLDLGSNKFSGSF-PEFVTRFEALKELDISNNLFSGSIPEGLTRLS-LEKLNLSHN 256
S L+ L + N F +F P+ T L LD+S P LS L+ LN+SHN
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Query: 257 NF 258
NF
Sbjct: 210 NF 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLV-DDFFVSRLTEFGLDQLMVP-AVADEMVA---LAK 544
GL YLHT I HG+V++ NVL+ D + L +FG + P + ++ +
Sbjct: 178 GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 545 ADGYKAPELQRMKKCSSRTDVYA 567
+ + APE+ K C ++ D+++
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWS 257
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 31/208 (14%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 41 AFGQVIEADAFGID---KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 95
Query: 436 IPLRAFYQGKRGEKLLIYDYFP----SRTLHDLLHDTIAGKP------VLNWARRHKIAL 485
+ L G ++I ++ S L ++ + KP L +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 486 GIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKA 545
+A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + + + + K
Sbjct: 156 QVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLAR----DIXKDPDXVRKG 208
Query: 546 DG-----YKAPELQRMKKCSSRTDVYAF 568
D + APE + + ++DV++F
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 489 RGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGY 548
RGL Y+H+ I H +++ NV V++ R+ +FGL + +EM Y
Sbjct: 142 RGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWY 194
Query: 549 KAPEL 553
+APE+
Sbjct: 195 RAPEI 199
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 385 IEKTTYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAF 441
I + T+G +KA+ G +AL+ + + K+ + L I+ L ++HEN++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 442 YQGK-------RGEKLLIYDYFPSRTLHDL--LHDTIAGKPVLNWARRHKIALGIARGLA 492
+ K +G L++D+ HDL L + K L+ +R + + GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDF----CEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLY 139
Query: 493 YLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
Y+H I H ++++ NVL+ V +L +FGL
Sbjct: 140 YIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 198 AQ---YVSPELLTEKSAXKSSDLWA 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 36/173 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 43 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 97
Query: 436 IPL-RAFYQGKRGEKLLIYDY--------FPSRTLHDLLHDTIA------------GKPV 474
+ L A G G L+I +Y F R +L ++A G+P+
Sbjct: 98 VNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 475 LNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
H + +A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 156 ELRDLLH-FSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 204
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 489 RGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGY 548
RGL Y+H+ I H +++ NV V++ R+ +FGL + +EM Y
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWY 186
Query: 549 KAPEL 553
+APE+
Sbjct: 187 RAPEI 191
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGXKYYSTAVDIWS 189
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 385 IEKTTYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAF 441
I + T+G +KA+ G +AL+ + + K+ + L I+ L ++HEN++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 442 -------YQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494
Y +G L++D F L LL + + + R ++ L GL Y+
Sbjct: 85 CRTKASPYNRCKGSIYLVFD-FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 140
Query: 495 HTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
H I H ++++ NVL+ V +L +FGL
Sbjct: 141 HRNK---ILHRDMKAANVLITRDGVLKLADFGL 170
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 489 RGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGY 548
RGL Y+H+ I H +++ NV V++ R+ +FGL + +EM Y
Sbjct: 142 RGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVATRWY 194
Query: 549 KAPEL 553
+APE+
Sbjct: 195 RAPEI 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 13 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 72
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 73 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 128
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 181
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 182 LLGCKYYSTAVDIWS 196
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIALGIARGLAYLH 495
L + KL + F S L + + G P L + + L +GLA+ H
Sbjct: 69 KLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCH 123
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE 552
+ + H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 124 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPE 176
Query: 553 -LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 177 ILLGCKYYSTAVDIWS 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I RGL Y+H+ I H +++ N+ V++ ++ +FGL + DEM
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATR 182
Query: 547 GYKAPEL 553
Y+APE+
Sbjct: 183 WYRAPEI 189
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 37/169 (21%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 58 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 112
Query: 436 IPL-RAFYQGKRGEKLLIYDYF-----------PSRTLHD-----LLHDTIAGKPVLNWA 478
+ L A G G L+I +Y SR L + + T + + +L+++
Sbjct: 113 VNLLGACTHG--GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 479 RRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+ +A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 171 SQ------VAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLH-DTIAGKPVLNWARRHKIALGIARGLAYLH 495
L + KL + F S L + + G P L + + L +GLA+ H
Sbjct: 67 KLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCH 121
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE 552
+ + H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPE 174
Query: 553 -LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 ILLGCKYYSTAVDIWS 190
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 199 AQ---YVSPELLTEKSACKSSDLWA 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 201 AQ---YVSPELLTEKSACKSSDLWA 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 381 TGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRA 440
TGQ + A+ D T A R LRE ++ L +H+N+I ++
Sbjct: 78 TGQQVAIKKIPNAF-----DVVTNAKRTLRE------------LKILKHFKHDNIIAIKD 120
Query: 441 FYQ-----GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
+ G+ ++ D S LH ++H + +P+ R+ + + RGL Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSS---QPLTLEHVRYFL-YQLLRGLKYMH 175
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE---MVALAKADGYKAPE 552
+ + H +++ N+LV++ ++ +FG+ + + + A+ M Y+APE
Sbjct: 176 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 553 L 553
L
Sbjct: 233 L 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 198 AQ---YVSPELLTEKSACKSSDLWA 219
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 199 SDLQYLDLGSNKFSGSF-PEFVTRFEALKELDISNNLFSGSIPEGLTRLS-LEKLNLSHN 256
S L+ L + N F +F P+ T L LD+S P LS L+ LN+SHN
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 257 NF 258
NF
Sbjct: 505 NF 506
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 199 SDLQYLDLGSNKFSGSF-PEFVTRFEALKELDISNNLFSGSIPEGLTRLS-LEKLNLSHN 256
S L+ L + N F +F P+ T L LD+S P LS L+ LN+SHN
Sbjct: 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528
Query: 257 NF 258
NF
Sbjct: 529 NF 530
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 199 AQ---YVSPELLTEKSACKSSDLWA 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 198 AQ---YVSPELLTEKSACKSSDLWA 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 122
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 175
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 176 LLGCKYYSTAVDIWS 190
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 203 AQ---YVSPELLTEKSACKSSDLWA 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 391 GTAYKA-KLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LRAFYQGKRGE 448
GT Y A +A G +A+R + + + I + + ++ N++ L ++ G E
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--E 91
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ +Y +L D++ +T ++ + + + L +LH+ + H +++
Sbjct: 92 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVA--DEMVALAKADGYKAPELQRMKKCSSRTDVY 566
S N+L+ +LT+FG + P + EMV + APE+ K + D++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPY---WMAPEVVTRKAYGPKVDIW 200
Query: 567 AF 568
+
Sbjct: 201 SL 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 198 AQ---YVSPELLTEKSACKSSDLWA 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 196 AQ---YVSPELLTEKSACKSSDLWA 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 176 AQ---YVSPELLTEKSACKSSDLWA 197
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 196 AQ---YVSPELLTEKSACKSSDLWA 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 196 AQ---YVSPELLTEKSACKSSDLWA 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 198 AQ---YVSPELLTEKSACKSSDLWA 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLR--A 440
+++ TYG YK + +A + + + + I L K H I A
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 441 FYQ----GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
F + G + L+ ++ + ++ DL+ +T W I I RGL++LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLH- 146
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+ + H +++ +NVL+ + +L +FG+
Sbjct: 147 --QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 10 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 69
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 70 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 125
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 178
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 179 LLGCKYYSTAVDIWS 193
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 124
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 177
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 178 LLGCKYYSTAVDIWS 192
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 123
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 176
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 177 LLGCKYYSTAVDIWS 191
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 120
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 173
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 LLGCKYYSTAVDIWS 188
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 195 AQ---YVSPELLTEKSACKSSDLWA 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 195 AQ---YVSPELLTEKSACKSSDLWA 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 196 AQ---YVSPELLTEKSACKSSDLWA 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 175 AQ---YVSPELLTEKSACKSSDLWA 196
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 173 AQ---YVSPELLTEKSACKSSDLWA 194
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 120
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 173
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 LLGCKYYSTAVDIWS 188
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 174 AQ---YVSPELLTEKSACKSSDLWA 195
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 120
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 173
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 LLGCKYYSTAVDIWS 188
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 120
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 173
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 LLGCKYYSTAVDIWS 188
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP----AVADEMVAL 542
I L YLH I H +++ +N+L+++ ++T+FG +++ P A A+ V
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
A+ Y +PEL K +D++A
Sbjct: 180 AQ---YVSPELLTEKSACKSSDLWA 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 122
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 175
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 176 LLGCKYYSTAVDIWS 190
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPS--RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494
L + + L++++ +T D T P++ + +GLA+
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLHQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGLAFC 122
Query: 495 HTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAP 551
H+ + H +++ +N+L++ +L +FGL + V E+V L Y+AP
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAP 175
Query: 552 E-LQRMKKCSSRTDVYA 567
E L K S+ D+++
Sbjct: 176 EILLGCKYYSTAVDIWS 192
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 123
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 176
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 177 LLGCKYYSTAVDIWS 191
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 146 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 196
Query: 527 LDQLM 531
L +L+
Sbjct: 197 LAKLL 201
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 401 GATIALRLLREGSCKDRSSCLPVIRQ--LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458
G A+++L++ + K R + + L V H ++ L +Q + G+ LI D+
Sbjct: 56 GHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTE-GKLYLILDFLRG 114
Query: 459 RTLHDLLHDTIAGKPVLNWARRHKIALG-IARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
L T K V+ K L +A GL +LH+ + I + +++ +N+L+D+
Sbjct: 115 GDLF-----TRLSKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPENILLDEE 166
Query: 518 FVSRLTEFGLDQLMVPAVADEMVALA--KADGYKAPELQRMKKCSSRTDVYAF 568
+LT+FGL + A+ E A + Y APE+ + S D +++
Sbjct: 167 GHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSY 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 69 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 124
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 177
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 178 LLGCKYYSTAVDIWS 192
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMF 198
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 122 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 172
Query: 527 LDQLM 531
L +L+
Sbjct: 173 LAKLL 177
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 145 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMF 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 8 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 68 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 123
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 176
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 177 LLGCKYYSTAVDIWS 191
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 122
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 175
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 176 LLGCKYYSTAVDIWS 190
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMF 198
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 122 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMF 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 120 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMF 201
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 116 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 166
Query: 527 LDQLM 531
L +L+
Sbjct: 167 LAKLL 171
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
L +L+
Sbjct: 163 LAKLL 167
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 7 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 67 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 122
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 175
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 176 LLGCKYYSTAVDIWS 190
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 119 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 169
Query: 527 LDQLM 531
L +L+
Sbjct: 170 LAKLL 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 113 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 163
Query: 527 LDQLM 531
L +L+
Sbjct: 164 LAKLL 168
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 10 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 69
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 70 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 125
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 178
Query: 553 LQRMKKCSSRTDVYAF 568
L K S+ D+++
Sbjct: 179 LLGCKYYSTAVDIWSL 194
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
L +L+
Sbjct: 163 LAKLL 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
L +L+
Sbjct: 163 LAKLL 167
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 119 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMF 200
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 114 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 164
Query: 527 LDQLM 531
L +L+
Sbjct: 165 LAKLL 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 137 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 187
Query: 527 LDQLM 531
L +L+
Sbjct: 188 LAKLL 192
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
L +L+
Sbjct: 163 LAKLL 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 384 VIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
V+ + +G KA+ A D A++ +R K S+ L + L + H+ ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 443 QGKRG-----------EKLLI-YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARG 490
+R L I +Y +RTL+DL+H + + R + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR---QILEA 128
Query: 491 LAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
L+Y+H+ I H +++ N+ +D+ ++ +FGL
Sbjct: 129 LSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 115 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 165
Query: 527 LDQLM 531
L +L+
Sbjct: 166 LAKLL 170
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 114 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMF 195
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 119 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 169
Query: 527 LDQLM 531
L +L+
Sbjct: 170 LAKLL 174
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 115 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 165
Query: 527 LDQLM 531
L +L+
Sbjct: 166 LAKLL 170
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 113 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 163
Query: 527 LDQLM 531
L +L+
Sbjct: 164 LAKLL 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 114 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 164
Query: 527 LDQLM 531
L +L+
Sbjct: 165 LAKLL 169
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 115 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 165
Query: 527 LDQLM 531
L +L+
Sbjct: 166 LAKLL 170
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 115 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 165
Query: 527 LDQLM 531
L +L+
Sbjct: 166 LAKLL 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 106 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 156
Query: 527 LDQLM 531
L +L+
Sbjct: 157 LAKLL 161
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
L +L+
Sbjct: 163 LAKLL 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 118 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 168
Query: 527 LDQLM 531
L +L+
Sbjct: 169 LAKLL 173
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 119 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 169
Query: 527 LDQLM 531
L +L+
Sbjct: 170 LAKLL 174
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 45/174 (25%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A G+V+E T +G + + +A+++L+ + D S L ++ LG+ HEN+
Sbjct: 58 AFGKVVEATAFGLGKEDAVL---KVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENI 112
Query: 436 IPLRA----------------------FYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
+ L F + KR L Y Y PS + L + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE-YSYNPSHNPEEQL----SSRD 167
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+L+++ + +A+G+A+L + + I H +V ++NVL+ + V+++ +FGL
Sbjct: 168 LLHFSSQ------VAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGL 212
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 370 EHLTLEDVLNATGQVIEKTTYGTAYKAKLADGATIALRLLR--EGSCKDRSSCLPVIRQL 427
E +ED+ G + + TYG YKAK DG L+ EG+ S+C I L
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-IALL 72
Query: 428 GKVRHENLIPLRAFYQGKRGEKL-LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
+++H N+I L+ + K+ L++DY HDL H + + ++ G
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDY----AEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 487 IARGLAY-----LHTGHEIPITHGNVRSKNVLV 514
+ + L Y +H H + H +++ N+LV
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 399 ADGATIALRLLREGSCKDRSSCLP-VIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
A G A++ + + + K + S + I L K++HEN++ L Y+ L++
Sbjct: 45 ATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVM----- 99
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV--- 514
L D I K + + + YL H + I H +++ +N+L
Sbjct: 100 QLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYL---HRMGIVHRDLKPENLLYYSQ 156
Query: 515 DDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYA 567
D+ +++FGL ++ D M GY APE+ K S D ++
Sbjct: 157 DEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 117 AYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMF 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGK--PVLNWARRH 481
I+ L ++RH+N+I L + +K+ + + + ++L D++ K PV + H
Sbjct: 57 IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML-DSVPEKRFPV---CQAH 112
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
+ GL YLH+ I H +++ N+L+ +++ G+ + + P AD+
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 542 LAKAD-GYKAPEL 553
++ ++ PE+
Sbjct: 170 TSQGSPAFQPPEI 182
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLV-DDFFVSRLTEFGLDQLMVP-AVADEMVA---LAK 544
GL YLH+ I HG+V++ NVL+ D + L +FG + P + +++ +
Sbjct: 178 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 545 ADGYKAPELQRMKKCSSRTDVYA 567
+ + APE+ + C ++ DV++
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWS 257
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 383 QVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENL 435
Q+++ G+ K KLA G +AL+++ + + R++ +R H ++
Sbjct: 17 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 76
Query: 436 IPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
I L + K E +++ +Y + L D I + ++ + I + Y H
Sbjct: 77 IKLYDVIKSK-DEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
H+I H +++ +N+L+D+ ++ +FGL +M + + + Y APE+
Sbjct: 131 R-HKI--VHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEV 183
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 383 QVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENL 435
Q+++ G+ K KLA G +AL+++ + + R++ +R H ++
Sbjct: 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 75
Query: 436 IPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
I L + K E +++ +Y + L D I + ++ + I + Y H
Sbjct: 76 IKLYDVIKSK-DEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
H+I H +++ +N+L+D+ ++ +FGL +M + + + Y APE+
Sbjct: 130 R-HKI--VHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEV 182
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 9 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 69 KLLDVIHTE-NKLYLVFEHVDQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 124
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRAPEI 177
Query: 553 LQRMKKCSSRTDVYAF 568
L K S+ D+++
Sbjct: 178 LLGCKYYSTAVDIWSL 193
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 391 GTAYKA-KLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LRAFYQGKRGE 448
GT Y A +A G +A+R + + + I + + ++ N++ L ++ G E
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--E 91
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ +Y +L D++ +T ++ + + + L +LH+ + H +++
Sbjct: 92 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
S N+L+ +LT+FG + P + + + + APE+ K + D+++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 108 SANLTGSLP-RELGEFSMLQSLYLNVNSLKGTIPFELGYS-SSLSEIDLSANLFTGVLAP 165
+N SLP + + L+ LYLN N L+ T+P + +L + ++ N L
Sbjct: 45 QSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LPI 102
Query: 166 SIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFV-TRFEA 224
+++ L LRL N L + P + + L YL LG N+ S P+ V + +
Sbjct: 103 GVFDQLVNLAELRLDRNQLKSLPPRVF---DSLTKLTYLSLGYNELQ-SLPKGVFDKLTS 158
Query: 225 LKELDISNNLFSGSIPEG-LTRLS-LEKLNLSHNNFSGV 261
LKEL + NN +PEG +L+ L+ L L +N V
Sbjct: 159 LKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRV 196
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPS--RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494
L + + L++++ +T D T P++ + +GLA+
Sbjct: 65 KLLDVIHTE-NKLYLVFEHVHQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGLAFC 118
Query: 495 HTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAP 551
H+ + H +++ +N+L++ +L +FGL + V E+V L Y+AP
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAP 171
Query: 552 E-LQRMKKCSSRTDVYAF 568
E L K S+ D+++
Sbjct: 172 EILLGCKYYSTAVDIWSL 189
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 497 AYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMF 578
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 41/212 (19%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 39 AFGQVIEADAFGID---KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 93
Query: 436 IPLRAFYQGKRGEKLLIYD---------YFPSRT-----LHDLLHDTIAGKPVLNWARRH 481
+ L G ++I + Y S+ DL D + + ++ ++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS--- 150
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
+A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + + +
Sbjct: 151 ---FQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLAR----DIYKDPDY 200
Query: 542 LAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ K D + APE + + ++DV++F
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 383 QVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENL 435
Q+++ G+ K KLA G +AL+++ + + R++ +R H ++
Sbjct: 11 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 70
Query: 436 IPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
I L + K E +++ +Y + L D I + ++ + I + Y H
Sbjct: 71 IKLYDVIKSK-DEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
H+I H +++ +N+L+D+ ++ +FGL +M + + + Y APE+
Sbjct: 125 R-HKI--VHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEV 177
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 391 GTAYKA-KLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LRAFYQGKRGE 448
GT Y A +A G +A+R + + + I + + ++ N++ L ++ G E
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--E 91
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ +Y +L D++ +T ++ + + + L +LH+ + H +++
Sbjct: 92 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 143
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
S N+L+ +LT+FG + P + + + + APE+ K + D+++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 383 QVIEKTTYGTAYKAKLA----DGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENL 435
Q+++ G+ K KLA G +AL+++ + + R++ +R H ++
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 66
Query: 436 IPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH 495
I L + K E +++ +Y + L D I + ++ + I + Y H
Sbjct: 67 IKLYDVIKSK-DEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
H+I H +++ +N+L+D+ ++ +FGL +M + + + Y APE+
Sbjct: 121 R-HKI--VHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEV 173
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 391 GTAYKA-KLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP-LRAFYQGKRGE 448
GT Y A +A G +A+R + + + I + + ++ N++ L ++ G E
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--E 92
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
++ +Y +L D++ +T ++ + + + L +LH+ + H +++
Sbjct: 93 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIK 144
Query: 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAF 568
S N+L+ +LT+FG + P + + + + APE+ K + D+++
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A ++ LAYL + H ++ ++NVLV +L +FGL + M + +
Sbjct: 497 AYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
+ APE ++ +S +DV+ F
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMF 578
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL+ +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GL++ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLSFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL +R + + S+ + I L ++ H N++
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 66 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 121
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 174
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 175 LLGCKYYSTAVDIWS 189
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 383 QVIEKT---TYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLI 436
Q +EK TYG YKA+ G +AL +R + + S+ + I L ++ H N++
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT 496
L + + L++++ + + G P L + + L +GLA+ H+
Sbjct: 65 KLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIP-LPLIKSYLFQL--LQGLAFCHS 120
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM---VPAVADEMVALAKADGYKAPE- 552
+ H +++ +N+L++ +L +FGL + V E+V L Y+APE
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEI 173
Query: 553 LQRMKKCSSRTDVYA 567
L K S+ D+++
Sbjct: 174 LLGCKYYSTAVDIWS 188
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I +GL YLH+ +I H ++++ NVL+ + +L +FG + + D +
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNXFV 165
Query: 547 G---YKAPELQRMKKCSSRTDVYAF 568
G + APE+ + S+ D+++
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSL 190
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 490 GLAYLHTGHEIPITHGNVRSKNVLV-DDFFVSRLTEFGLDQLMVP-AVADEMVA---LAK 544
GL YLH+ I HG+V++ NVL+ D + L +FG + P + ++ +
Sbjct: 197 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 545 ADGYKAPELQRMKKCSSRTDVYA 567
+ + APE+ + C ++ DV++
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWS 276
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I +GL YLH+ +I H ++++ NVL+ + +L +FG + + D +
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNTFV 165
Query: 547 G---YKAPELQRMKKCSSRTDVYAF 568
G + APE+ + S+ D+++
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSL 190
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I +GL YLH+ +I H ++++ NVL+ + +L +FG + + D +
Sbjct: 133 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNTFV 185
Query: 547 G---YKAPELQRMKKCSSRTDVYAF 568
G + APE+ + S+ D+++
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSL 210
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 109 DNIGSQYLLNWC------VQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 159
Query: 527 LDQLM 531
L +L+
Sbjct: 160 LAKLL 164
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I +GL YLH+ +I H ++++ NVL+ + +L +FG+ + D +
Sbjct: 128 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGV----AGQLTDTQIKRNXFV 180
Query: 547 G---YKAPELQRMKKCSSRTDVYAF 568
G + APE+ + S+ D+++
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSL 205
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 385 IEKTTYGTAYKAK-LADGATIALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLRAF 441
I + T+G +KA+ G +AL+ + + K+ + L I+ L ++HEN++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 442 YQGK-------RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494
+ K + L++D F L LL + + + R ++ L GL Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFD-FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 495 HTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
H I H ++++ NVL+ V +L +FGL
Sbjct: 142 HRNK---ILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 31/180 (17%)
Query: 400 DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD--YFP 457
D ALR LRE I+ L +HEN+I + +R + ++ Y
Sbjct: 48 DKPLFALRTLRE------------IKILKHFKHENII---TIFNIQRPDSFENFNEVYII 92
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
+ LH I+ + +L+ R + LH + + H +++ N+L++
Sbjct: 93 QELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSN 148
Query: 518 FVSRLTEFGLDQLMVPAVADE---------MVALAKADGYKAPELQRMKKCSSRT-DVYA 567
++ +FGL +++ + AD MV Y+APE+ SR DV++
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 390 YGTAYK-AKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE 448
+G +K + A G +A ++++ KD+ I + ++ H NLI L ++ K +
Sbjct: 102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-ND 160
Query: 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508
+L+ +Y L D + D L+ K I G+ ++ H++ I H +++
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHM---HQMYILHLDLK 214
Query: 509 SKNVLV--DDFFVSRLTEFGLDQLMVP 533
+N+L D ++ +FGL + P
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKP 241
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 385 IEKTTYGTAYKAK-LADGAT-IALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIP 437
I + YG +KA+ L +G +AL+ +R EG + V+R L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 438 LRAFYQGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAY 493
L R ++ L++++ L G P + + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 494 LHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
LH+ + H +++ +N+LV +L +FGL ++ +A + ++ Y+APE+
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 554 QRMKKCSSRTDVYA 567
++ D+++
Sbjct: 191 LLQSSYATPVDLWS 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 41/212 (19%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 39 AFGQVIEADAFGID---KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 93
Query: 436 IPLRAFYQGKRGEKLLIYD---------YFPSRT-----LHDLLHDTIAGKPVLNWARRH 481
+ L G ++I + Y S+ DL D + + ++ ++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS--- 150
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
+A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + + +
Sbjct: 151 ---FQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDY 200
Query: 542 LAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ K D + APE + + ++DV++F
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 383 QVIEKTTYGTAYKAKLADGAT----IALRLLREGSCKDRSSCLPVIRQ--LGKVRHENLI 436
+V+ + ++G + K G+ A+++L++ + K R + + L +V H ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG-IARGLAYLH 495
L +Q + G+ LI D+ L T K V+ K L +A L +LH
Sbjct: 91 KLHYAFQTE-GKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQR 555
+ + I + +++ +N+L+D+ +LT+FGL + + + + Y APE+
Sbjct: 145 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVVN 200
Query: 556 MKKCSSRTDVYAF 568
+ + D ++F
Sbjct: 201 RRGHTQSADWWSF 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 383 QVIEKTTYGTAYKAKLADGAT----IALRLLREGSCKDRSSCLPVIRQ--LGKVRHENLI 436
+V+ + ++G + K G+ A+++L++ + K R + + L +V H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG-IARGLAYLH 495
L +Q + G+ LI D+ L T K V+ K L +A L +LH
Sbjct: 90 KLHYAFQTE-GKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQR 555
+ + I + +++ +N+L+D+ +LT+FGL + + + + Y APE+
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVVN 199
Query: 556 MKKCSSRTDVYAF 568
+ + D ++F
Sbjct: 200 RRGHTQSADWWSF 212
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSK 510
L+ + P R L D+L AG+ + R KI + R LA L H +VR
Sbjct: 319 LVMEKLPGRLLSDML---AAGEEI----DREKILGSLLRSLAALEKQ---GFWHDDVRPW 368
Query: 511 NVLVDDFFVSRLTEFG 526
NV+VD +RL +FG
Sbjct: 369 NVMVDARQHARLIDFG 384
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 385 IEKTTYGTAYKAK-LADGAT-IALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIP 437
I + YG +KA+ L +G +AL+ +R EG + V+R L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 438 LRAFYQGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAY 493
L R ++ L++++ L G P + + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 494 LHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
LH+ + H +++ +N+LV +L +FGL ++ +A + ++ Y+APE+
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 554 QRMKKCSSRTDVYA 567
++ D+++
Sbjct: 191 LLQSSYATPVDLWS 204
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSK 510
L+ + P R L D+L AG+ + R KI + R LA L H +VR
Sbjct: 319 LVMEKLPGRLLSDML---AAGEEI----DREKILGSLLRSLAALEKQG---FWHDDVRPW 368
Query: 511 NVLVDDFFVSRLTEFG 526
NV+VD +RL +FG
Sbjct: 369 NVMVDARQHARLIDFG 384
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 40 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 96
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YSYNPSHNPEEQL----SSKD 151
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 152 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 196
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 33 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 89
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 90 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YSYNPSHNPEEQL----SSKD 144
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 145 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 385 IEKTTYGTAYKAK-LADGAT-IALRLLR-----EGSCKDRSSCLPVIRQLGKVRHENLIP 437
I + YG +KA+ L +G +AL+ +R EG + V+R L H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 438 LRAFYQGKRGEK----LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAY 493
L R ++ L++++ L G P + + RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---DMMFQLLRGLDF 135
Query: 494 LHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553
LH+ + H +++ +N+LV +L +FGL ++ +A + ++ Y+APE+
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 554 QRMKKCSSRTDVYA 567
++ D+++
Sbjct: 191 LLQSSYATPVDLWS 204
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 29 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 85
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 86 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YSYNPSHNPEEQL----SSKD 140
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 141 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 185
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 32 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 88
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 89 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YSYNPSHNPEEQL----SSKD 143
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 144 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 188
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 383 QVIEKTTYGTAYKAKLADGAT----IALRLLREGSCKDRSSCLPVIRQ--LGKVRHENLI 436
+V+ + ++G + K G+ A+++L++ + K R + + L +V H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 437 PLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG-IARGLAYLH 495
L +Q + G+ LI D+ L T K V+ K L +A L +LH
Sbjct: 90 KLHYAFQTE-GKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 496 TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQR 555
+ + I + +++ +N+L+D+ +LT+FGL + + + + Y APE+
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVVN 199
Query: 556 MKKCSSRTDVYAF 568
+ + D ++F
Sbjct: 200 RRGHTQSADWWSF 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 379 NATGQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLG---KVRHEN 434
N V+ K TYG Y + L++ IA++ + E +D P+ ++ ++H+N
Sbjct: 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKN 80
Query: 435 LIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWA--RRHKIALG-----I 487
++ + + G + + P +L LL W + ++ +G I
Sbjct: 81 IVQYLGSFS-ENGFIKIFMEQVPGGSLSALLRS--------KWGPLKDNEQTIGFYTKQI 131
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFF-VSRLTEFG 526
GL YLH I H +++ NVL++ + V ++++FG
Sbjct: 132 LEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFG 168
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 81 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 137
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YSYNPSHNPEEQL----SSKD 192
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A + +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 193 LVSCAYQ------VARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L +++H N+I L Y+ K + +LI + L D L A K L +
Sbjct: 68 LKEIQHPNVITLHEVYENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQ 122
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGL 527
I G+ YLH+ + I H +++ +N+++ D V ++ +FGL
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L +++H N+I L Y+ K + +LI + L D L A K L +
Sbjct: 68 LKEIQHPNVITLHEVYENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQ 122
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGL 527
I G+ YLH+ + I H +++ +N+++ D V ++ +FGL
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 401 GATIALRLLREGSCK---DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
G A++++ + K D+ S L ++ L ++ H N++ L F++ K G L+ + +
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GYFYLVGEVYT 109
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
L D I + + +I + G+ Y+H I H +++ +N+L++
Sbjct: 110 GGE----LFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 162
Query: 518 FVS---RLTEFGL 527
R+ +FGL
Sbjct: 163 SKDANIRIIDFGL 175
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENKT-DVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L +++H N+I L Y+ K + +LI + L D L A K L +
Sbjct: 68 LKEIQHPNVITLHEVYENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQ 122
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGL 527
I G+ YLH+ + I H +++ +N+++ D V ++ +FGL
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 379 NATGQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLG---KVRHEN 434
N V+ K TYG Y + L++ IA++ + E +D P+ ++ ++H+N
Sbjct: 10 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKN 66
Query: 435 LIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWA--RRHKIALG-----I 487
++ + + G + + P +L LL W + ++ +G I
Sbjct: 67 IVQYLGSFS-ENGFIKIFMEQVPGGSLSALLRS--------KWGPLKDNEQTIGFYTKQI 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFF-VSRLTEFG 526
GL YLH I H +++ NVL++ + V ++++FG
Sbjct: 118 LEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFG 154
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 31 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 82
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 83 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 134
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 31 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 82
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 83 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 134
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ---LGKVRHENLIPLRAFY 442
EK+T G Y AK ++ R S + S + R+ L +++H N+I L Y
Sbjct: 32 EKST-GLQYAAKF-------IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 443 QGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPI 502
+ K + +LI + L D L A K L + I G+ YLH+ + I
Sbjct: 84 ENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLHS---LQI 135
Query: 503 THGNVRSKNVLVDDFFVS----RLTEFGL 527
H +++ +N+++ D V ++ +FGL
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L +++H N+I L Y+ K + +LI + L D L A K L +
Sbjct: 68 LKEIQHPNVITLHEVYENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQ 122
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGL 527
I G+ YLH+ + I H +++ +N+++ D V ++ +FGL
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 482 KIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541
KI L + L H + I H +++ N+L+D +L +FG+ +V ++A A
Sbjct: 129 KITLATVKALN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 542 LAKADGYKAPELQRMKKCSSR 562
+ Y APE R+ +SR
Sbjct: 187 GCRP--YMAPE--RIDPSASR 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATI-ALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLR 439
+ I + TYGT +KAK + I AL+ +R + SS L I L +++H+N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ KL + F + L D+ G L+ + +GL + H+ +
Sbjct: 68 DVLHSDK--KLTLVFEFCDQDLKKYF-DSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+ H +++ +N+L++ +L +FGL
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSK 510
L+ + P R L D+L AG+ + R KI + R LA L H +VR
Sbjct: 319 LVMEKLPGRLLSDML---AAGEEI----DREKILGSLLRSLAALEKKG---FWHDDVRPW 368
Query: 511 NVLVDDFFVSRLTEFG 526
NV+VD +RL +FG
Sbjct: 369 NVMVDARQHARLIDFG 384
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG 547
YLH I ITH +++ +N+L+D+ ++++FGL + + + L K G
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--LNKMXG 168
Query: 548 ---YKAPE-LQRMKKCSSRTDVYA 567
Y APE L+R + + DV++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWS 192
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG 547
YLH I ITH +++ +N+L+D+ ++++FGL + + + L K G
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--LNKMXG 168
Query: 548 ---YKAPE-LQRMKKCSSRTDVYA 567
Y APE L+R + + DV++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWS 192
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L +++H N+I L Y+ K + +LI + L D L A K L +
Sbjct: 68 LKEIQHPNVITLHEVYENK-TDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQ 122
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGL 527
I G+ YLH+ + I H +++ +N+++ D V ++ +FGL
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 114 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 164
Query: 527 LDQLM 531
+L+
Sbjct: 165 RAKLL 169
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 114 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 164
Query: 527 LDQLM 531
+L+
Sbjct: 165 RAKLL 169
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 116 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 166
Query: 527 LDQLM 531
+L+
Sbjct: 167 RAKLL 171
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 401 GATIALRLLREGSCK---DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
G A++++ + K D+ S L ++ L ++ H N++ L F++ K G L+ + +
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GYFYLVGEVYT 132
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
L D I + + +I + G+ Y+H I H +++ +N+L++
Sbjct: 133 GGE----LFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 185
Query: 518 FVS---RLTEFGL 527
R+ +FGL
Sbjct: 186 SKDANIRIIDFGL 198
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 114 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 164
Query: 527 LDQLM 531
+L+
Sbjct: 165 RAKLL 169
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 62 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 116
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 117 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 149
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 112 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 162
Query: 527 LDQLM 531
+L+
Sbjct: 163 RAKLL 167
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 401 GATIALRLLREGSCK---DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
G A++++ + K D+ S L ++ L ++ H N++ L F++ K G L+ + +
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GYFYLVGEVYT 133
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
L D I + + +I + G+ Y+H I H +++ +N+L++
Sbjct: 134 GGE----LFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 186
Query: 518 FVS---RLTEFGL 527
R+ +FGL
Sbjct: 187 SKDANIRIIDFGL 199
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG 547
YLH I ITH +++ +N+L+D+ ++++FGL + + + L K G
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--LNKMXG 169
Query: 548 ---YKAPE-LQRMKKCSSRTDVYA 567
Y APE L+R + + DV++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWS 193
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 467 DTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526
D I + +LNW + IA+G+ YL + H ++ ++NVLV ++T+FG
Sbjct: 119 DNIGSQYLLNWC------VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFG 169
Query: 527 LDQLM 531
+L+
Sbjct: 170 RAKLL 174
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG 547
YLH I ITH +++ +N+L+D+ ++++FGL + + + L K G
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--LNKMXG 168
Query: 548 ---YKAPE-LQRMKKCSSRTDVYA 567
Y APE L+R + + DV++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWS 192
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADG 547
YLH I ITH +++ +N+L+D+ ++++FGL + + + L K G
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL--LNKMXG 168
Query: 548 ---YKAPE-LQRMKKCSSRTDVYA 567
Y APE L+R + + DV++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWS 192
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 64 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 118
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 119 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 20/183 (10%)
Query: 395 KAKLA----DGATIALRLLREGSCKDRSSCLPVIRQ----LGKVRHENLIPLRAFYQGKR 446
K KLA G +A++++ + + S LP I+ L +RH+++ L +
Sbjct: 25 KVKLACHILTGEMVAIKIMDKNTL---GSDLPRIKTEIEALKNLRHQHICQLYHVLETA- 80
Query: 447 GEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGN 506
+ ++ +Y P L D I + L+ + I +AY+H+ H +
Sbjct: 81 NKIFMVLEYCPGGELFDY----IISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRD 133
Query: 507 VRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL-QRMKKCSSRTDV 565
++ +N+L D++ +L +FGL + + Y APEL Q S DV
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV 193
Query: 566 YAF 568
++
Sbjct: 194 WSM 196
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 432 HENLIPLRAFYQGKRGE---KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR-HKIALGI 487
HEN++ FY G R E + L +Y L D + I G P + R H++ G+
Sbjct: 63 HENVV---KFY-GHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGV 117
Query: 488 ARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
YLH I ITH +++ +N+L+D+ ++++FGL
Sbjct: 118 V----YLHG---IGITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA 543
A + L YLH+ I + +++ +N+L+D ++T+FG + V D L
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLC 164
Query: 544 KADGYKAPELQRMKKCSSRTDVYAF 568
Y APE+ K + D ++F
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSF 189
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 40 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 96
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 97 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YCYNPSHNPEEQL----SSKD 151
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 152 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 196
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 43/174 (24%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLR----EGSCKDRSSCLPVIRQLGKVRHENL 435
A GQV+ G K K +A+++L+ E D S + +++ +GK H+N+
Sbjct: 25 AFGQVVLAEAIGLD-KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNI 81
Query: 436 IPL----------------------RAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP 473
I L R + Q +R L Y Y PS + L + K
Sbjct: 82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE-YCYNPSHNPEEQL----SSKD 136
Query: 474 VLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+++ A +ARG+ YL + I H ++ ++NVLV + V ++ +FGL
Sbjct: 137 LVS------CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGL 181
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 503 THGNVRSKNVLV--DDFFVSRLTEFGLDQLMVPAVADE-MVALAKADG---YKAPELQRM 556
TH +V+ +N+LV DDF + L +FG+ A DE + L G Y APE
Sbjct: 156 THRDVKPENILVSADDF--AYLVDFGI----ASATTDEKLTQLGNTVGTLYYXAPERFSE 209
Query: 557 KKCSSRTDVYAF 568
+ R D+YA
Sbjct: 210 SHATYRADIYAL 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 401 GATIALRLLREGSCK---DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457
G A++++ + K D+ S L ++ L ++ H N++ L F++ K G L+ + +
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-GYFYLVGEVYT 115
Query: 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517
L D I + + +I + G+ Y+H I H +++ +N+L++
Sbjct: 116 GGE----LFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESK 168
Query: 518 FVS---RLTEFGL 527
R+ +FGL
Sbjct: 169 SKDANIRIIDFGL 181
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 39 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 93
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 154 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIXK 200
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 383 QVIEKTTYGTAYKAKLADGATI-ALRLLREGSCKD--RSSCLPVIRQLGKVRHENLIPLR 439
+ I + TYGT +KAK + I AL+ +R + SS L I L +++H+N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE 499
+ KL + F + L D+ G L+ + +GL + H+ +
Sbjct: 68 DVLHSDK--KLTLVFEFCDQDLKKYF-DSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 500 IPITHGNVRSKNVLVDDFFVSRLTEFGL 527
+ H +++ +N+L++ +L FGL
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I GL +LH + I + +++ +NVL+DD R+++ GL + + A + A
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL-AVELKAGQTKTKGYAGTP 353
Query: 547 GYKAPELQRMKKCSSRTDVYA 567
G+ APEL ++ D +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFA 374
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I GL +LH + I + +++ +NVL+DD R+++ GL + + A + A
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL-AVELKAGQTKTKGYAGTP 353
Query: 547 GYKAPELQRMKKCSSRTDVYA 567
G+ APEL ++ D +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFA 374
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I GL +LH + I + +++ +NVL+DD R+++ GL + + A + A
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL-AVELKAGQTKTKGYAGTP 353
Query: 547 GYKAPELQRMKKCSSRTDVYA 567
G+ APEL ++ D +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFA 374
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKAD 546
I GL +LH + I + +++ +NVL+DD R+++ GL + + A + A
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL-AVELKAGQTKTKGYAGTP 353
Query: 547 GYKAPELQRMKKCSSRTDVYA 567
G+ APEL ++ D +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFA 374
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 424 IRQLGKVRHENLIPLRAFYQGKRGEKL----LIYDYFPSRTLHDLLHDTIAGKPVLNWAR 479
I+ L + RHEN+I +R + E + ++ D + L ++ + +
Sbjct: 92 IQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY 151
Query: 480 RHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE- 538
+ I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P
Sbjct: 152 Q------ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 539 -MVALAKADGYKAPEL 553
+ Y+APE+
Sbjct: 203 FLTEXVATRWYRAPEI 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 498 HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMK 557
H+ I H +++++N+L+D ++ +FG V ++ A A Y APEL + K
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPELFQGK 188
Query: 558 KCSS-RTDVYAF 568
K DV++
Sbjct: 189 KYDGPEVDVWSL 200
>pdb|3CVR|A Chain A, Crystal Structure Of The Full Length Ipah3
Length = 571
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 45/178 (25%)
Query: 119 LGEFSMLQSLYLNVNSLKGTIP-----FELGYSSSLSEIDLSANLFTGVLAPSIWNLCDR 173
+ +FS LQ LN++SL +P E+ ++ +S +L A+L + CD
Sbjct: 58 INQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL-------EYLDACDN 110
Query: 174 LVS-----------LRLHGNSLTAALPE-PALPNSTCSDLQYLDLGSNKFSGSFPEFVTR 221
+S L + N LT LPE PAL L+Y++ +N+ + PE T
Sbjct: 111 RLSTLPELPASLKHLDVDNNQLT-XLPELPAL-------LEYINADNNQLT-XLPELPTS 161
Query: 222 FEALKELDISNN--LFSGSIPEGLTRLSLEKLNLSHNNFSGV--LPVFSESKFGAEVF 275
E L + NN F +PE SLE L++S N + +PV + E+F
Sbjct: 162 LEVLS---VRNNQLTFLPELPE-----SLEALDVSTNLLESLPAVPVRNHHSEETEIF 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 30 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 84
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 145 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIXK 191
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/72 (19%), Positives = 35/72 (48%)
Query: 497 GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRM 556
H++ I H +++ +N+L+D ++ +FG+ + + + + Y +PE +
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 557 KKCSSRTDVYAF 568
+ TD+Y+
Sbjct: 187 EATDECTDIYSI 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 382 GQVIEKTTYGTAYKAKLADGATIALRLLRE-GSCKDRSSCLPVIRQLGKVRHENLIPLRA 440
G+V++ T + +A T+A+++L+E S + L L +V H ++I L
Sbjct: 37 GKVVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 441 FYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP------------VLNWARRHKIALG-- 486
+ G LLI +Y +L L ++ P L+ + +G
Sbjct: 94 ACS-QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 487 ------IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
I++G+ YL E+ + H ++ ++N+LV + ++++FGL +
Sbjct: 153 ISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 77/197 (39%), Gaps = 24/197 (12%)
Query: 78 LSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRE-LGEFSMLQSLYLNVNSLK 136
LS DI NL L S HL S+ L S N SL E E L+ L L LK
Sbjct: 357 LSHDDIETSDCCNLQLRNLS--HLQSLNL-SYNEPLSLKTEAFKECPQLELLDLAFTRLK 413
Query: 137 ---GTIPFE-------LGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTA 186
PF+ L S SL +I S LF G+ A L L L GN
Sbjct: 414 VKDAQSPFQNLHLLKVLNLSHSLLDIS-SEQLFDGLPA---------LQHLNLQGNHFPK 463
Query: 187 ALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL 246
+ T L+ L L S T + + +D+S+N + S E L+ L
Sbjct: 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523
Query: 247 SLEKLNLSHNNFSGVLP 263
LNL+ N+ S +LP
Sbjct: 524 KGIYLNLASNHISIILP 540
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 382 GQVIEKTTYGTAYKAKLADGATIALRLLRE-GSCKDRSSCLPVIRQLGKVRHENLIPLRA 440
G+V++ T + +A T+A+++L+E S + L L +V H ++I L
Sbjct: 37 GKVVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 441 FYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP------------VLNWARRHKIALG-- 486
+ G LLI +Y +L L ++ P L+ + +G
Sbjct: 94 AC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 487 ------IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
I++G+ YL E+ + H ++ ++N+LV + ++++FGL +
Sbjct: 153 ISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 382 GQVIEKTTYGTAYKAKLADGATIALRLLRE-GSCKDRSSCLPVIRQLGKVRHENLIPLRA 440
G+V++ T + +A T+A+++L+E S + L L +V H ++I L
Sbjct: 37 GKVVKATAFHLKGRAGYT---TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 441 FYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKP------------VLNWARRHKIALG-- 486
+ G LLI +Y +L L ++ P L+ + +G
Sbjct: 94 AC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 487 ------IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529
I++G+ YL E+ + H ++ ++N+LV + ++++FGL +
Sbjct: 153 ISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 384 VIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFY 442
V+ + +G KA+ A D A++ +R K S+ L + L + H+ ++ A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 443 QGKRG-----------EKLLI-YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARG 490
+R L I +Y + TL+DL+H + + R + I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR---QILEA 128
Query: 491 LAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527
L+Y+H+ I H +++ N+ +D+ ++ +FGL
Sbjct: 129 LSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 39 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 93
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 154 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIYK 200
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 30 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 84
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 145 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIXK 191
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNN 233
LHGN ++ PA +C +L L L SN +G T L++LD+S+N
Sbjct: 38 LHGNRISYV---PAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDN 89
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 147 SSLSEI-DLSANLFTGVLAPSIWN-LCDRLVSLR---LHGNSLTAALPEPALPNSTCSDL 201
S+L E+ +L+ + TG S+ N + D+L +L+ L N L +LP+ ++L
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVF--DKLTNL 135
Query: 202 QYLDLGSNKFSGSFPEFV-TRFEALKELDISNNLFSGSIPEGL-TRLS-LEKLNLSHNNF 258
YL+L N+ S P+ V + L ELD+S N S+PEG+ +L+ L+ L L N
Sbjct: 136 TYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL 193
Query: 259 SGVLP-VFSESKFGAEVFEGNSPALCGFP--------LRDCSGNSRLSSGAIA 302
V VF ++ ++P C P + SG R S+G++A
Sbjct: 194 KSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGSVA 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 39 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 93
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 154 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIYK 200
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L ++RH N+I L ++ K + +LI + L D L A K L +
Sbjct: 69 LREIRHPNIITLHDIFENK-TDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQ 123
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGLDQLMVPAVADEMVAL 542
I G+ YLH+ I H +++ +N+++ D V +L +FG+ + +E +
Sbjct: 124 ILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 178
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
+ APE+ + D+++
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 76 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 130
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 191 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIYK 237
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L ++RH N+I L ++ K + +LI + L D L A K L +
Sbjct: 83 LREIRHPNIITLHDIFENK-TDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQ 137
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGLDQLMVPAVADEMVAL 542
I G+ YLH+ I H +++ +N+++ D V +L +FG+ + +E +
Sbjct: 138 ILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 192
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
+ APE+ + D+++
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWS 217
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 427 LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALG 486
L ++RH N+I L ++ K + +LI + L D L A K L +
Sbjct: 62 LREIRHPNIITLHDIFENK-TDVVLILELVSGGELFDFL----AEKESLTEDEATQFLKQ 116
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS----RLTEFGLDQLMVPAVADEMVAL 542
I G+ YLH+ I H +++ +N+++ D V +L +FG+ + +E +
Sbjct: 117 ILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNI 171
Query: 543 AKADGYKAPELQRMKKCSSRTDVYA 567
+ APE+ + D+++
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWS 196
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 465 LHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTE 524
L D I L+ ++ I G+ Y H + H +++ +NVL+D +++ +
Sbjct: 103 LFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIAD 159
Query: 525 FGLDQLM 531
FGL +M
Sbjct: 160 FGLSNMM 166
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKA- 545
IA G+ YL + H + H ++ ++NVLV D ++++ GL + + AD L +
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVY--AADYYKLLGNSL 208
Query: 546 --DGYKAPELQRMKKCSSRTDVYAF 568
+ APE K S +D++++
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSY 233
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 30 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 84
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 145 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIYK 191
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKA- 545
IA G+ YL + H + H ++ ++NVLV D ++++ GL + + AD L +
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVY--AADYYKLLGNSL 191
Query: 546 --DGYKAPELQRMKKCSSRTDVYAF 568
+ APE K S +D++++
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSY 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 201 LQYLDLGSNKFSGSFPEFVTRFEALKELDISNN---LFSGSIPEGLTRLSLEKLNLSHNN 257
L+ L++ N F P +LK+L + N+ L + +GL SL +LNL+HNN
Sbjct: 220 LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA--SLVELNLAHNN 277
Query: 258 FSGVLP--VFSESKFGAEVFEGNSPALC 283
S LP +F+ ++ E+ ++P C
Sbjct: 278 LSS-LPHDLFTPLRYLVELHLHHNPWNC 304
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 45/216 (20%)
Query: 380 ATGQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRS----SCLPVIRQLGKVRHENL 435
A GQVIE +G K A T+A+++L+EG+ S L ++ +G H N+
Sbjct: 30 AFGQVIEADAFGID---KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNV 84
Query: 436 I-----------PLRAFYQGKRGEKLLIY------DYFPSRTL-HDLLHDTIAGKPVLNW 477
+ PL + + L Y ++ P + DL D + + ++ +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 478 ARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537
+ +A+G+ +L + I H ++ ++N+L+ + V ++ +FGL + +
Sbjct: 145 S------FQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLAR----DIYK 191
Query: 538 EMVALAKADG-----YKAPELQRMKKCSSRTDVYAF 568
+ + K D + APE + + ++DV++F
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 498 HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM 531
H I H +++ +N+L+DD ++ +FGL +M
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 192 ALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEK 250
A+P ++ + LDLG N+ + F L+EL+++ N+ S P L +L
Sbjct: 25 AVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 84
Query: 251 LNLSHNNFSGV-LPVFS 266
L L N + L VF+
Sbjct: 85 LGLRSNRLKLIPLGVFT 101
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 487 IARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE--MVALAK 544
I RGL Y+H+ + + H +++ N+L++ ++ +FGL ++ P +
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 545 ADGYKAPELQRMKKCSSRT-DVYA 567
Y+APE+ K +++ D+++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,093,894
Number of Sequences: 62578
Number of extensions: 729462
Number of successful extensions: 2332
Number of sequences better than 100.0: 602
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 579
Number of HSP's that attempted gapping in prelim test: 2073
Number of HSP's gapped (non-prelim): 657
length of query: 679
length of database: 14,973,337
effective HSP length: 105
effective length of query: 574
effective length of database: 8,402,647
effective search space: 4823119378
effective search space used: 4823119378
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)