Query 005749
Match_columns 679
No_of_seqs 639 out of 4796
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 06:24:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-55 7.2E-60 454.9 16.1 254 382-659 18-289 (299)
2 4aoj_A High affinity nerve gro 100.0 5.3E-55 1.8E-59 458.1 19.2 255 382-660 46-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 6.1E-55 2.1E-59 453.3 18.6 252 382-657 31-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 3.8E-54 1.3E-58 445.6 20.5 256 381-660 40-301 (307)
5 4fih_A Serine/threonine-protei 100.0 1.4E-52 4.8E-57 439.4 18.1 244 383-653 80-324 (346)
6 4b9d_A Serine/threonine-protei 100.0 1.1E-52 3.6E-57 441.0 15.7 244 383-653 30-277 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 5.6E-52 1.9E-56 433.5 20.3 247 382-658 63-315 (336)
8 3hmm_A TGF-beta receptor type- 100.0 3.9E-52 1.3E-56 432.9 17.9 267 382-661 8-299 (303)
9 4ase_A Vascular endothelial gr 100.0 1.4E-52 4.6E-57 443.3 14.6 257 381-659 68-347 (353)
10 3fpq_A Serine/threonine-protei 100.0 6E-52 2.1E-56 426.0 18.1 243 383-653 32-283 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.2E-52 1.4E-56 429.3 12.7 244 381-652 36-284 (311)
12 4fie_A Serine/threonine-protei 100.0 2.7E-51 9.4E-56 440.0 18.7 244 383-653 157-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 4.4E-51 1.5E-55 416.0 17.4 241 382-653 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.9E-51 9.8E-56 423.1 11.6 242 382-652 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.4E-49 4.7E-54 412.0 15.2 246 382-653 10-280 (299)
16 4b99_A Mitogen-activated prote 100.0 1.8E-47 6.2E-52 411.0 14.0 262 382-653 59-345 (398)
17 2qkw_B Protein kinase; three-h 100.0 4E-45 1.4E-49 384.3 23.7 273 382-661 44-317 (321)
18 4f9c_A Cell division cycle 7-r 100.0 1.8E-45 6.2E-50 391.3 19.4 192 382-586 26-251 (361)
19 3uim_A Brassinosteroid insensi 100.0 8E-45 2.7E-49 382.7 21.6 287 370-660 18-312 (326)
20 3v5w_A G-protein coupled recep 100.0 6.2E-45 2.1E-49 407.7 19.0 244 382-653 194-450 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.5E-45 8.7E-50 413.3 15.7 247 382-653 162-411 (573)
22 3s95_A LIMK-1, LIM domain kina 100.0 3.3E-43 1.1E-47 367.7 20.7 254 382-659 15-282 (310)
23 3zgw_A Maternal embryonic leuc 100.0 2.2E-43 7.7E-48 374.2 17.4 245 382-654 15-262 (347)
24 4hcu_A Tyrosine-protein kinase 100.0 5E-43 1.7E-47 358.5 17.9 250 382-659 15-266 (269)
25 2psq_A Fibroblast growth facto 100.0 8.8E-43 3E-47 373.7 19.8 253 382-658 86-363 (370)
26 3sxs_A Cytoplasmic tyrosine-pr 100.0 8E-43 2.7E-47 356.7 18.6 252 383-662 14-267 (268)
27 3p86_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47 366.5 16.1 257 382-661 42-300 (309)
28 2c30_A Serine/threonine-protei 100.0 2.1E-42 7.1E-47 363.6 20.9 257 370-653 23-295 (321)
29 2nru_A Interleukin-1 receptor- 100.0 1.2E-41 4.1E-46 355.2 26.4 278 370-659 13-306 (307)
30 3cbl_A C-FES, proto-oncogene t 100.0 2.5E-43 8.4E-48 379.2 14.0 252 382-660 119-375 (377)
31 3fxz_A Serine/threonine-protei 100.0 1.5E-42 5E-47 360.7 19.3 244 383-653 26-270 (297)
32 3soc_A Activin receptor type-2 100.0 6.6E-43 2.2E-47 367.6 16.9 265 382-659 29-318 (322)
33 1qcf_A Haematopoetic cell kina 100.0 9.6E-43 3.3E-47 383.8 18.5 253 382-662 193-447 (454)
34 3kul_A Ephrin type-A receptor 100.0 6.4E-43 2.2E-47 368.2 16.3 253 382-661 54-315 (325)
35 3fe3_A MAP/microtubule affinit 100.0 6E-43 2.1E-47 368.5 15.9 241 383-653 21-265 (328)
36 1o6l_A RAC-beta serine/threoni 100.0 4E-42 1.4E-46 363.5 20.7 243 382-653 10-261 (337)
37 3poz_A Epidermal growth factor 100.0 1.1E-42 3.7E-47 366.8 16.1 251 382-660 20-279 (327)
38 2qol_A Ephrin receptor; recept 100.0 8E-43 2.7E-47 374.4 15.0 251 382-659 50-309 (373)
39 3gen_A Tyrosine-protein kinase 100.0 2.7E-42 9.2E-47 355.7 17.5 250 382-659 29-280 (283)
40 4eqm_A Protein kinase; transfe 100.0 7.2E-42 2.5E-46 354.9 20.7 258 383-663 17-279 (294)
41 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.9E-42 9.8E-47 379.7 18.1 255 382-664 189-445 (452)
42 1k9a_A Carboxyl-terminal SRC k 100.0 7.9E-42 2.7E-46 376.0 20.3 247 382-660 198-446 (450)
43 3q4u_A Activin receptor type-1 100.0 1.4E-41 4.9E-46 353.3 20.9 256 382-657 13-300 (301)
44 3ugc_A Tyrosine-protein kinase 100.0 3.4E-42 1.2E-46 357.3 16.2 264 382-659 15-291 (295)
45 2yab_A Death-associated protei 100.0 1.4E-41 4.7E-46 362.6 21.3 245 382-652 17-272 (361)
46 1opk_A P150, C-ABL, proto-onco 100.0 4.8E-42 1.6E-46 382.0 18.4 251 382-659 225-478 (495)
47 3vhe_A Vascular endothelial gr 100.0 3.3E-42 1.1E-46 367.6 15.3 256 382-659 27-355 (359)
48 3kex_A Receptor tyrosine-prote 100.0 5.1E-42 1.7E-46 361.3 16.5 250 383-660 19-277 (325)
49 1luf_A Muscle-specific tyrosin 100.0 6E-42 2.1E-46 363.1 16.4 257 382-662 52-338 (343)
50 4dc2_A Protein kinase C IOTA t 100.0 1.9E-41 6.4E-46 365.1 20.0 252 382-653 57-319 (396)
51 3t9t_A Tyrosine-protein kinase 100.0 9.9E-42 3.4E-46 348.1 16.9 250 382-659 13-264 (267)
52 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-42 9.3E-47 367.1 13.2 242 382-652 28-280 (353)
53 1mp8_A Focal adhesion kinase 1 100.0 8.7E-42 3E-46 351.7 16.6 250 382-659 20-276 (281)
54 3niz_A Rhodanese family protei 100.0 2.8E-41 9.4E-46 353.4 20.7 259 383-653 27-301 (311)
55 2izr_A Casein kinase I isoform 100.0 3E-41 1E-45 356.2 21.1 254 382-658 14-280 (330)
56 3l9p_A Anaplastic lymphoma kin 100.0 4.4E-42 1.5E-46 367.9 14.8 254 382-659 76-345 (367)
57 3c0i_A Peripheral plasma membr 100.0 2.2E-41 7.5E-46 360.4 19.6 247 381-653 28-287 (351)
58 3c1x_A Hepatocyte growth facto 100.0 9.8E-42 3.4E-46 365.7 17.0 256 382-663 94-359 (373)
59 4aw2_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 372.3 17.0 250 382-653 79-339 (437)
60 2y0a_A Death-associated protei 100.0 5.2E-41 1.8E-45 353.8 22.1 247 381-653 15-272 (326)
61 3qup_A Tyrosine-protein kinase 100.0 1.2E-41 4E-46 358.0 17.1 256 382-660 28-299 (323)
62 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-41 3.4E-46 360.1 16.6 242 382-654 14-260 (336)
63 3tki_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 357.0 18.1 247 382-653 12-262 (323)
64 3tt0_A Basic fibroblast growth 100.0 1.7E-41 5.7E-46 365.6 18.2 254 382-659 74-352 (382)
65 1tki_A Titin; serine kinase, m 100.0 1.8E-41 6.2E-46 356.4 17.8 243 382-654 10-259 (321)
66 4euu_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 350.1 23.7 270 382-660 14-310 (319)
67 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-41 4.1E-46 356.1 16.1 255 382-660 28-312 (314)
68 1csn_A Casein kinase-1; phosph 100.0 6E-41 2.1E-45 348.0 21.2 257 382-660 15-284 (298)
69 2x4f_A Myosin light chain kina 100.0 1.1E-41 3.8E-46 365.4 15.9 246 383-653 95-343 (373)
70 2eva_A TAK1 kinase - TAB1 chim 100.0 4E-41 1.4E-45 351.5 19.6 249 382-659 13-263 (307)
71 3lb7_A RAF proto-oncogene seri 100.0 3.3E-41 1.1E-45 352.2 18.8 255 382-660 41-301 (307)
72 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-41 7.9E-46 354.9 17.7 240 382-653 11-259 (318)
73 3dtc_A Mitogen-activated prote 100.0 1.5E-41 5E-46 347.8 15.8 247 382-657 12-271 (271)
74 3qd2_B Eukaryotic translation 100.0 3.1E-41 1.1E-45 355.5 18.7 246 382-653 11-326 (332)
75 2h8h_A Proto-oncogene tyrosine 100.0 1.4E-41 4.7E-46 381.8 16.8 254 382-663 272-527 (535)
76 1rjb_A FL cytokine receptor; k 100.0 3.5E-41 1.2E-45 357.6 19.0 261 382-665 50-340 (344)
77 4f0f_A Serine/threonine-protei 100.0 8.4E-41 2.9E-45 345.3 21.3 247 383-657 25-287 (287)
78 3v8s_A RHO-associated protein 100.0 1.7E-41 5.7E-46 367.5 16.0 246 383-653 75-330 (410)
79 3pls_A Macrophage-stimulating 100.0 5.5E-41 1.9E-45 348.3 19.0 255 382-661 26-289 (298)
80 3cc6_A Protein tyrosine kinase 100.0 4E-41 1.4E-45 346.7 17.8 250 382-659 17-273 (281)
81 3f66_A Hepatocyte growth facto 100.0 6.3E-41 2.2E-45 348.1 19.2 254 382-661 30-293 (298)
82 1xjd_A Protein kinase C, theta 100.0 1E-41 3.6E-46 361.3 13.4 242 382-652 22-269 (345)
83 3lxl_A Tyrosine-protein kinase 100.0 9.7E-42 3.3E-46 359.4 13.1 267 382-661 28-305 (327)
84 4fvq_A Tyrosine-protein kinase 100.0 9.7E-42 3.3E-46 352.5 12.9 247 382-660 13-276 (289)
85 3kn6_A Ribosomal protein S6 ki 100.0 3E-41 1E-45 355.4 16.8 246 382-653 16-271 (325)
86 2ozo_A Tyrosine-protein kinase 100.0 4E-41 1.4E-45 383.5 19.2 248 384-659 343-598 (613)
87 4fr4_A YANK1, serine/threonine 100.0 6.5E-41 2.2E-45 359.7 19.6 244 382-652 20-271 (384)
88 3a62_A Ribosomal protein S6 ki 100.0 4.4E-41 1.5E-45 354.5 17.8 243 382-653 22-277 (327)
89 3soa_A Calcium/calmodulin-depe 100.0 3.8E-41 1.3E-45 368.7 17.9 247 382-653 16-268 (444)
90 4e5w_A Tyrosine-protein kinase 100.0 2.3E-41 7.7E-46 352.1 15.1 264 382-658 26-301 (302)
91 2bdw_A Hypothetical protein K1 100.0 3.5E-41 1.2E-45 360.1 16.8 246 382-653 34-285 (362)
92 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.4E-41 1.2E-45 358.3 16.4 239 383-653 47-294 (350)
93 1qpc_A LCK kinase; alpha beta 100.0 4.7E-41 1.6E-45 345.7 16.9 250 382-659 18-269 (279)
94 4ejn_A RAC-alpha serine/threon 100.0 3.1E-41 1.1E-45 371.1 16.5 243 382-653 153-405 (446)
95 3a8x_A Protein kinase C IOTA t 100.0 5.3E-41 1.8E-45 356.3 17.7 250 382-653 14-276 (345)
96 1t46_A HOMO sapiens V-KIT hard 100.0 4.7E-41 1.6E-45 351.4 16.6 256 382-660 28-308 (313)
97 3lzb_A Epidermal growth factor 100.0 4.4E-41 1.5E-45 354.4 16.5 249 383-659 21-278 (327)
98 2buj_A Serine/threonine-protei 100.0 1E-40 3.5E-45 349.8 19.1 261 382-663 34-310 (317)
99 4hgt_A Casein kinase I isoform 100.0 2.1E-40 7.3E-45 343.4 21.1 258 382-660 14-281 (296)
100 1ob3_A PFPK5, cell division co 100.0 5.1E-41 1.7E-45 347.4 16.3 260 383-653 8-281 (288)
101 3kfa_A Tyrosine-protein kinase 100.0 4.9E-41 1.7E-45 347.1 16.2 251 382-659 18-271 (288)
102 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-40 5.7E-45 348.5 20.1 263 383-653 11-294 (317)
103 2vd5_A DMPK protein; serine/th 100.0 3.5E-41 1.2E-45 365.1 15.1 248 383-653 67-328 (412)
104 2zv2_A Calcium/calmodulin-depe 100.0 1E-40 3.5E-45 346.8 18.0 245 382-653 18-293 (298)
105 3op5_A Serine/threonine-protei 100.0 9.3E-41 3.2E-45 357.4 18.1 261 382-658 40-328 (364)
106 3uzp_A CKI-delta, CKID, casein 100.0 3.4E-40 1.2E-44 342.0 21.7 259 382-661 14-282 (296)
107 2i0e_A Protein kinase C-beta I 100.0 4.3E-41 1.5E-45 357.7 15.2 243 382-653 25-277 (353)
108 2ac3_A MAP kinase-interacting 100.0 1.2E-40 4.1E-45 349.0 18.4 259 382-653 18-296 (316)
109 3mdy_A Bone morphogenetic prot 100.0 4.9E-40 1.7E-44 347.4 23.1 264 382-662 42-334 (337)
110 3kmu_A ILK, integrin-linked ki 100.0 6.2E-41 2.1E-45 342.7 15.7 249 382-659 15-270 (271)
111 1u59_A Tyrosine-protein kinase 100.0 6.8E-41 2.3E-45 346.1 16.0 250 383-660 16-273 (287)
112 3og7_A AKAP9-BRAF fusion prote 100.0 4E-41 1.4E-45 348.3 14.2 254 382-659 29-288 (289)
113 1kob_A Twitchin; kinase, intra 100.0 7.1E-41 2.4E-45 360.3 16.5 247 382-653 56-305 (387)
114 2pvf_A Fibroblast growth facto 100.0 1.2E-40 4E-45 352.2 17.8 254 382-659 40-318 (334)
115 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-40 5E-45 353.6 18.5 245 382-653 58-306 (349)
116 1p4o_A Insulin-like growth fac 100.0 9.1E-41 3.1E-45 350.9 16.4 257 382-661 30-301 (322)
117 3o0g_A Cell division protein k 100.0 1.8E-40 6E-45 343.9 18.4 261 383-653 8-283 (292)
118 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-40 6E-45 341.0 18.2 241 382-653 14-262 (277)
119 1mqb_A Ephrin type-A receptor 100.0 1.3E-40 4.5E-45 351.8 17.6 251 382-659 49-309 (333)
120 4fl3_A Tyrosine-protein kinase 100.0 8.1E-41 2.8E-45 382.0 16.9 247 383-658 375-630 (635)
121 2r5t_A Serine/threonine-protei 100.0 5.4E-41 1.9E-45 359.5 14.5 243 382-653 43-290 (373)
122 2y94_A 5'-AMP-activated protei 100.0 1E-40 3.6E-45 367.7 17.1 242 382-653 21-267 (476)
123 3gxj_A TGF-beta receptor type- 100.0 6.7E-42 2.3E-46 356.0 6.7 261 382-662 8-300 (303)
124 3cok_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 340.9 17.5 244 382-653 16-263 (278)
125 2xir_A Vascular endothelial gr 100.0 1.2E-40 4.1E-45 348.8 16.3 256 382-659 32-310 (316)
126 2wqm_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 347.6 16.7 261 382-663 37-301 (310)
127 3gni_B Strad alpha; kinase fol 100.0 1.3E-40 4.6E-45 359.4 17.0 267 383-657 31-340 (389)
128 3dls_A PAS domain-containing s 100.0 1.4E-40 4.7E-45 351.8 16.7 236 382-653 29-275 (335)
129 3ork_A Serine/threonine protei 100.0 9.2E-41 3.2E-45 349.4 15.1 254 382-658 17-280 (311)
130 1nxk_A MAP kinase-activated pr 100.0 3.3E-40 1.1E-44 357.3 20.0 247 383-654 68-323 (400)
131 2eue_A Carbon catabolite derep 100.0 2.1E-40 7.3E-45 340.1 17.3 240 383-653 19-263 (275)
132 2a2a_A Death-associated protei 100.0 8.9E-40 3.1E-44 343.5 22.1 247 381-653 16-273 (321)
133 2h34_A Serine/threonine-protei 100.0 3E-40 1E-44 345.3 18.3 257 382-663 39-300 (309)
134 3uc3_A Serine/threonine-protei 100.0 2.8E-40 9.6E-45 353.1 18.4 246 383-653 26-275 (361)
135 1vzo_A Ribosomal protein S6 ki 100.0 1.9E-40 6.6E-45 353.7 17.0 249 382-654 59-323 (355)
136 3hko_A Calcium/calmodulin-depe 100.0 2.2E-40 7.5E-45 351.5 17.4 260 374-653 21-331 (345)
137 3p1a_A MYT1 kinase, membrane-a 100.0 3.4E-40 1.2E-44 345.1 18.5 240 382-653 62-305 (311)
138 3g2f_A Bone morphogenetic prot 100.0 1.7E-40 6E-45 350.9 16.4 270 382-668 18-328 (336)
139 3fdn_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45 341.4 16.0 242 382-654 14-259 (279)
140 3ttj_A Mitogen-activated prote 100.0 1.8E-40 6.1E-45 366.0 17.1 258 382-653 67-356 (464)
141 3lxp_A Non-receptor tyrosine-p 100.0 9.4E-41 3.2E-45 350.5 14.0 265 382-660 36-311 (318)
142 3i6u_A CDS1, serine/threonine- 100.0 8.1E-40 2.8E-44 356.6 22.0 242 382-653 140-400 (419)
143 1byg_A CSK, protein (C-termina 100.0 1.5E-40 5.1E-45 341.8 15.1 246 382-659 26-273 (278)
144 3is5_A Calcium-dependent prote 100.0 3.9E-40 1.3E-44 340.2 18.2 248 382-653 27-279 (285)
145 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.5E-40 1.2E-44 367.7 19.1 249 383-652 191-448 (543)
146 3mtl_A Cell division protein k 100.0 1.2E-40 4.2E-45 350.6 14.5 263 383-657 8-288 (324)
147 3oz6_A Mitogen-activated prote 100.0 2.4E-40 8.1E-45 357.4 17.1 260 382-653 14-329 (388)
148 1fvr_A Tyrosine-protein kinase 100.0 2.5E-40 8.7E-45 348.5 16.8 254 382-661 30-302 (327)
149 3ll6_A Cyclin G-associated kin 100.0 1.2E-40 4.2E-45 351.7 14.4 257 382-663 33-312 (337)
150 4eut_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 357.1 18.2 271 382-661 14-311 (396)
151 3brb_A Proto-oncogene tyrosine 100.0 3.6E-40 1.2E-44 345.0 17.7 255 382-659 39-308 (313)
152 1u5q_A Serine/threonine protei 100.0 1.5E-40 5.2E-45 353.2 15.0 243 382-655 59-308 (348)
153 4agu_A Cyclin-dependent kinase 100.0 1.7E-40 5.8E-45 347.1 15.1 259 383-653 9-285 (311)
154 2v62_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 350.7 17.3 261 382-659 42-328 (345)
155 2jii_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 353.5 15.4 261 382-662 47-339 (352)
156 2a19_B Interferon-induced, dou 100.0 1.1E-39 3.9E-44 335.9 20.7 246 382-662 16-277 (284)
157 3g33_A Cell division protein k 100.0 5.7E-40 2E-44 342.8 18.4 261 383-653 15-297 (308)
158 2qr7_A Ribosomal protein S6 ki 100.0 2.8E-40 9.5E-45 350.3 16.2 246 382-653 27-278 (342)
159 2acx_A G protein-coupled recep 100.0 2.8E-40 9.5E-45 369.4 16.8 247 383-653 190-445 (576)
160 2i1m_A Macrophage colony-stimu 100.0 1.9E-40 6.3E-45 350.4 14.5 255 382-659 51-326 (333)
161 1xbb_A Tyrosine-protein kinase 100.0 4.1E-40 1.4E-44 341.0 16.3 247 383-658 23-278 (291)
162 2vgo_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 338.3 17.5 249 382-661 19-273 (284)
163 2clq_A Mitogen-activated prote 100.0 5.8E-40 2E-44 340.1 17.2 248 383-653 28-279 (295)
164 3llt_A Serine/threonine kinase 100.0 7E-40 2.4E-44 349.9 18.3 191 383-585 41-262 (360)
165 2w1i_A JAK2; chromosomal rearr 100.0 8E-40 2.7E-44 344.7 18.0 263 382-658 46-321 (326)
166 3dbq_A Dual specificity protei 100.0 4.5E-40 1.5E-44 349.2 16.2 246 382-654 14-275 (343)
167 1b6c_B TGF-B superfamily recep 100.0 1.9E-39 6.4E-44 343.8 20.9 260 382-661 47-338 (342)
168 3byv_A Rhoptry kinase; malaria 100.0 4.2E-41 1.4E-45 361.8 7.9 238 382-652 78-359 (377)
169 3bhy_A Death-associated protei 100.0 3E-39 1E-43 332.8 21.3 251 382-658 10-273 (283)
170 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-39 4.1E-44 348.9 19.1 247 383-660 71-340 (365)
171 3rp9_A Mitogen-activated prote 100.0 1.1E-39 3.8E-44 360.0 19.4 189 382-578 58-280 (458)
172 2rku_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 339.7 16.6 244 382-654 20-267 (294)
173 3lm5_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 346.7 15.3 248 382-653 34-288 (327)
174 2zmd_A Dual specificity protei 100.0 7.8E-40 2.7E-44 353.3 17.2 245 382-653 61-321 (390)
175 2jam_A Calcium/calmodulin-depe 100.0 9.4E-40 3.2E-44 340.5 17.2 245 382-653 14-262 (304)
176 2owb_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 346.7 16.1 243 382-653 46-292 (335)
177 2w5a_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 341.8 10.9 254 383-657 12-272 (279)
178 2yex_A Serine/threonine-protei 100.0 1.5E-39 5.3E-44 333.5 17.9 247 382-653 12-262 (276)
179 3kk8_A Calcium/calmodulin depe 100.0 1.3E-39 4.6E-44 335.6 17.4 245 383-653 12-262 (284)
180 1j1b_A Glycogen synthase kinas 100.0 1E-39 3.4E-44 356.0 17.1 257 382-653 59-337 (420)
181 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.6E-40 1.6E-44 347.0 13.9 260 382-653 39-319 (329)
182 3eb0_A Putative uncharacterize 100.0 1.2E-39 3.9E-44 351.4 17.3 259 382-653 12-322 (383)
183 3mi9_A Cell division protein k 100.0 1.5E-39 5.3E-44 346.1 18.0 263 382-653 22-312 (351)
184 2yfx_A Tyrosine-protein kinase 100.0 8E-40 2.7E-44 344.7 15.5 255 382-659 35-304 (327)
185 1cm8_A Phosphorylated MAP kina 100.0 1.5E-39 5.1E-44 348.3 17.7 256 383-653 31-308 (367)
186 3rgf_A Cyclin-dependent kinase 100.0 1.5E-39 5.3E-44 353.1 17.8 275 373-653 17-334 (405)
187 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-39 7.2E-44 337.6 18.0 244 382-654 27-272 (303)
188 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-39 3.7E-44 336.3 15.4 240 382-653 16-280 (289)
189 3pfq_A PKC-B, PKC-beta, protei 100.0 1.2E-39 4.1E-44 374.8 17.4 242 382-652 346-597 (674)
190 3sv0_A Casein kinase I-like; t 100.0 7.7E-39 2.6E-43 353.4 23.0 256 382-658 12-277 (483)
191 2y7j_A Phosphorylase B kinase 100.0 6.6E-39 2.3E-43 343.0 21.5 241 383-653 100-360 (365)
192 1t4h_A Serine/threonine-protei 100.0 2.5E-39 8.7E-44 334.8 17.5 245 383-653 32-283 (290)
193 2h6d_A 5'-AMP-activated protei 100.0 1.7E-39 5.7E-44 333.4 15.9 242 382-653 16-262 (276)
194 1ua2_A CAK, cell division prot 100.0 1.5E-39 5.2E-44 345.5 15.5 262 382-654 15-293 (346)
195 2ycf_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 335.8 21.1 241 382-652 15-274 (322)
196 3mwu_A Calmodulin-domain prote 100.0 3.2E-39 1.1E-43 359.0 18.5 245 382-653 27-277 (486)
197 3n9x_A Phosphotransferase; mal 100.0 3.6E-39 1.2E-43 352.9 18.5 193 382-582 31-252 (432)
198 2j0j_A Focal adhesion kinase 1 100.0 2.1E-39 7.1E-44 371.7 17.3 250 382-659 395-651 (656)
199 2j7t_A Serine/threonine-protei 100.0 1.5E-39 5E-44 338.4 14.5 246 383-653 25-276 (302)
200 2xrw_A Mitogen-activated prote 100.0 3.8E-39 1.3E-43 345.8 18.1 259 382-654 30-320 (371)
201 3eqc_A Dual specificity mitoge 100.0 7.5E-40 2.6E-44 349.7 12.5 259 383-653 39-325 (360)
202 3nyv_A Calmodulin-domain prote 100.0 1.8E-39 6.2E-44 360.8 16.0 245 382-653 31-282 (484)
203 4aaa_A Cyclin-dependent kinase 100.0 7.8E-40 2.7E-44 345.5 12.3 259 382-653 30-307 (331)
204 3lij_A Calcium/calmodulin depe 100.0 4.5E-39 1.5E-43 358.5 19.0 245 382-653 42-292 (494)
205 2wtk_C Serine/threonine-protei 100.0 6.3E-39 2.2E-43 334.1 18.7 246 382-653 10-264 (305)
206 1u46_A ACK-1, activated CDC42 100.0 1.6E-39 5.4E-44 336.1 13.9 254 382-661 23-286 (291)
207 3q5i_A Protein kinase; CDPK, m 100.0 8.8E-39 3E-43 357.0 20.9 241 382-653 41-302 (504)
208 3kvw_A DYRK2, dual specificity 100.0 3.3E-39 1.1E-43 352.8 16.9 193 382-586 102-303 (429)
209 3an0_A Dual specificity mitoge 100.0 1.8E-39 6E-44 344.0 14.1 247 383-653 57-311 (340)
210 3qyz_A Mitogen-activated prote 100.0 9.6E-39 3.3E-43 341.8 19.9 259 383-653 33-314 (364)
211 3nsz_A CK II alpha, casein kin 100.0 2.4E-38 8.2E-43 333.6 22.7 256 382-653 41-320 (330)
212 3fme_A Dual specificity mitoge 100.0 1.3E-39 4.5E-44 336.6 12.7 247 383-653 13-267 (290)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-39 8.3E-44 339.5 14.8 253 382-662 38-305 (319)
214 1wak_A Serine/threonine-protei 100.0 1E-38 3.5E-43 345.0 19.6 261 382-653 42-392 (397)
215 4e7w_A Glycogen synthase kinas 100.0 2.9E-39 9.8E-44 349.4 15.2 264 382-657 45-328 (394)
216 2pml_X PFPK7, Ser/Thr protein 100.0 3.7E-39 1.2E-43 342.5 15.2 257 382-653 36-323 (348)
217 3com_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 334.4 18.1 245 382-653 34-279 (314)
218 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-39 4.7E-44 349.2 11.9 249 382-652 67-352 (371)
219 2vwi_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 334.2 15.1 258 382-653 20-288 (303)
220 2fst_X Mitogen-activated prote 100.0 4.8E-39 1.6E-43 344.2 15.1 256 383-653 35-312 (367)
221 3pg1_A Mitogen-activated prote 100.0 9.3E-39 3.2E-43 341.5 17.2 259 383-653 28-317 (362)
222 1q8y_A SR protein kinase; tran 100.0 2.6E-38 8.9E-43 339.2 20.7 261 382-653 24-334 (373)
223 2r3i_A Cell division protein k 100.0 2.6E-38 8.8E-43 328.5 19.4 261 383-653 9-284 (299)
224 3e3p_A Protein kinase, putativ 100.0 1.8E-38 6.3E-43 338.7 18.4 268 382-658 28-322 (360)
225 2i6l_A Mitogen-activated prote 100.0 1.3E-38 4.4E-43 333.7 16.2 258 383-653 17-306 (320)
226 1phk_A Phosphorylase kinase; g 100.0 1.9E-38 6.6E-43 329.3 16.6 246 382-653 22-284 (298)
227 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-38 5.5E-43 334.4 16.2 247 382-653 29-287 (326)
228 4exu_A Mitogen-activated prote 100.0 2.8E-38 9.6E-43 339.0 18.0 255 382-653 47-324 (371)
229 1z57_A Dual specificity protei 100.0 2.3E-38 7.8E-43 334.4 16.0 256 383-653 20-329 (339)
230 1blx_A Cyclin-dependent kinase 100.0 2.8E-38 9.5E-43 332.5 16.6 262 382-653 16-297 (326)
231 2wei_A Calmodulin-domain prote 100.0 4E-38 1.4E-42 325.4 15.9 245 382-653 27-277 (287)
232 2rio_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 345.0 16.3 248 382-652 20-295 (434)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 2.2E-37 7.6E-42 329.4 21.5 260 382-653 16-306 (353)
234 3a99_A Proto-oncogene serine/t 100.0 3.1E-38 1.1E-42 331.7 14.5 235 382-653 48-294 (320)
235 3coi_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 335.4 15.2 256 382-653 29-306 (353)
236 1zy4_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 327.0 14.8 247 382-653 11-284 (303)
237 2vx3_A Dual specificity tyrosi 100.0 7.8E-38 2.7E-42 336.9 17.2 194 382-585 59-261 (382)
238 2iwi_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 328.5 15.0 235 382-653 36-284 (312)
239 3fhr_A MAP kinase-activated pr 100.0 4.9E-38 1.7E-42 332.5 14.6 247 382-653 34-288 (336)
240 3aln_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 331.6 13.7 251 382-653 27-286 (327)
241 3cek_A Dual specificity protei 100.0 8.5E-38 2.9E-42 327.1 15.9 245 383-654 34-294 (313)
242 3p23_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 341.0 16.7 243 382-652 29-283 (432)
243 2eu9_A Dual specificity protei 100.0 8E-38 2.7E-42 332.6 15.3 257 382-653 24-334 (355)
244 2dyl_A Dual specificity mitoge 100.0 6.2E-37 2.1E-41 320.9 15.2 246 382-653 30-284 (318)
245 3uqc_A Probable conserved tran 100.0 1.2E-36 4.1E-41 314.2 16.8 244 383-678 37-285 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 5.4E-37 1.8E-41 346.2 13.3 270 381-661 18-311 (676)
247 2pzi_A Probable serine/threoni 100.0 3E-36 1E-40 348.5 14.9 233 383-657 86-326 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 5.8E-36 2E-40 325.5 15.5 238 382-652 83-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 2.6E-35 9.1E-40 306.2 18.5 223 382-653 23-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.2E-35 4.2E-40 314.0 8.8 236 381-651 24-329 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-31 6.5E-36 278.9 17.0 259 27-291 2-313 (313)
252 4azs_A Methyltransferase WBDD; 100.0 2.3E-30 7.9E-35 291.4 5.9 186 383-581 240-437 (569)
253 3rgz_A Protein brassinosteroid 99.9 1.9E-27 6.6E-32 278.7 15.6 229 25-265 6-266 (768)
254 3en9_A Glycoprotease, O-sialog 99.9 3.3E-27 1.1E-31 264.2 9.5 182 382-582 341-538 (540)
255 3rgz_A Protein brassinosteroid 99.9 6.2E-26 2.1E-30 265.9 14.6 190 100-293 491-751 (768)
256 4eco_A Uncharacterized protein 99.9 7.6E-26 2.6E-30 259.3 12.4 205 27-263 26-347 (636)
257 4fcg_A Uncharacterized protein 99.9 1.8E-25 6.2E-30 235.1 9.0 216 25-264 21-247 (328)
258 4ecn_A Leucine-rich repeat pro 99.9 2.1E-25 7.1E-30 261.0 10.4 199 26-263 264-589 (876)
259 1zar_A RIO2 kinase; serine kin 99.9 1.8E-23 6E-28 214.7 8.1 152 382-567 95-274 (282)
260 2o6q_A Variable lymphocyte rec 99.9 1.6E-21 5.6E-26 199.0 20.5 216 60-285 2-221 (270)
261 3m19_A Variable lymphocyte rec 99.9 7.4E-22 2.5E-26 199.3 16.9 193 61-263 3-196 (251)
262 1ogq_A PGIP-2, polygalacturona 99.9 2E-22 7E-27 210.3 11.5 163 100-266 51-217 (313)
263 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 184.8 12.4 157 100-266 29-185 (208)
264 4fcg_A Uncharacterized protein 99.8 2.2E-20 7.6E-25 196.2 12.4 158 100-264 105-271 (328)
265 3e6j_A Variable lymphocyte rec 99.8 1.8E-19 6.1E-24 179.1 15.8 167 53-263 9-176 (229)
266 3rfs_A Internalin B, repeat mo 99.8 1.5E-19 5.3E-24 184.5 14.7 161 99-265 63-224 (272)
267 1ozn_A Reticulon 4 receptor; N 99.8 1.1E-18 3.8E-23 179.3 17.7 160 100-263 33-194 (285)
268 1ozn_A Reticulon 4 receptor; N 99.8 6.8E-19 2.3E-23 180.9 16.0 163 98-264 55-219 (285)
269 1p9a_G Platelet glycoprotein I 99.8 1.7E-18 5.9E-23 178.4 18.4 178 99-285 31-211 (290)
270 2z80_A TOLL-like receptor 2, v 99.8 9.9E-19 3.4E-23 185.5 15.5 188 55-260 22-212 (353)
271 1zth_A RIO1 serine protein kin 99.8 2.6E-19 9E-24 181.3 10.4 135 382-531 52-219 (258)
272 3zyi_A Leucine-rich repeat-con 99.8 2.7E-18 9.2E-23 188.5 18.8 161 99-264 99-284 (452)
273 3m19_A Variable lymphocyte rec 99.8 4.3E-18 1.5E-22 171.6 17.7 158 101-265 16-174 (251)
274 4eco_A Uncharacterized protein 99.8 4.1E-19 1.4E-23 203.4 10.7 162 98-266 205-396 (636)
275 2z66_A Variable lymphocyte rec 99.8 1.8E-18 6.3E-23 179.5 14.1 161 99-263 52-216 (306)
276 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-18 5.7E-23 171.0 12.9 152 105-263 17-170 (220)
277 3v47_A TOLL-like receptor 5B a 99.8 7.3E-19 2.5E-23 193.0 11.5 164 99-264 30-198 (455)
278 3rfs_A Internalin B, repeat mo 99.8 6.6E-18 2.3E-22 172.4 17.8 176 100-284 42-220 (272)
279 2z62_A TOLL-like receptor 4, v 99.8 3.8E-18 1.3E-22 174.5 15.6 161 100-264 29-195 (276)
280 2z62_A TOLL-like receptor 4, v 99.8 3E-18 1E-22 175.2 13.6 183 98-285 51-240 (276)
281 2z81_A CD282 antigen, TOLL-lik 99.8 3.4E-18 1.2E-22 192.4 15.2 157 99-259 26-185 (549)
282 2z66_A Variable lymphocyte rec 99.8 2.9E-18 9.9E-23 178.0 13.4 163 99-266 78-243 (306)
283 2v9t_B SLIT homolog 2 protein 99.8 5.9E-18 2E-22 167.0 14.5 133 123-259 32-165 (220)
284 3oja_B Anopheles plasmodium-re 99.8 7.4E-18 2.5E-22 191.7 16.7 111 99-213 75-185 (597)
285 2v70_A SLIT-2, SLIT homolog 2 99.7 8.6E-18 3E-22 165.8 14.9 137 100-240 33-170 (220)
286 4g8a_A TOLL-like receptor 4; l 99.7 7.4E-18 2.5E-22 192.6 16.6 203 50-264 10-219 (635)
287 1wwl_A Monocyte differentiatio 99.7 2.7E-18 9.2E-23 179.0 11.4 161 98-264 120-291 (312)
288 2o6q_A Variable lymphocyte rec 99.7 1.7E-17 5.9E-22 169.0 16.8 162 98-263 60-222 (270)
289 1wwl_A Monocyte differentiatio 99.7 6.8E-19 2.3E-23 183.5 6.5 161 100-264 96-270 (312)
290 4ecn_A Leucine-rich repeat pro 99.7 2.4E-18 8.2E-23 201.4 11.8 160 98-265 447-637 (876)
291 3v47_A TOLL-like receptor 5B a 99.7 3.2E-18 1.1E-22 187.9 11.7 136 124-263 276-412 (455)
292 3zyj_A Leucine-rich repeat-con 99.7 1.5E-17 5.1E-22 182.0 16.8 181 99-285 88-295 (440)
293 3cvr_A Invasion plasmid antige 99.7 3.6E-18 1.2E-22 191.2 11.7 179 53-264 33-224 (571)
294 2v9t_B SLIT homolog 2 protein 99.7 1.7E-17 5.9E-22 163.7 14.7 135 99-237 32-166 (220)
295 3vq2_A TLR4, TOLL-like recepto 99.7 8.1E-18 2.8E-22 191.7 13.9 160 99-259 350-534 (606)
296 3vq2_A TLR4, TOLL-like recepto 99.7 1.8E-17 6.2E-22 188.8 16.0 163 99-265 32-200 (606)
297 4glp_A Monocyte differentiatio 99.7 3.3E-18 1.1E-22 178.1 8.9 175 100-278 92-282 (310)
298 3t6q_A CD180 antigen; protein- 99.7 1.2E-17 4.1E-22 190.3 14.0 163 100-264 377-541 (606)
299 2o6s_A Variable lymphocyte rec 99.7 4.5E-17 1.5E-21 159.1 16.2 140 122-265 27-167 (208)
300 2id5_A Lingo-1, leucine rich r 99.7 1.7E-17 5.8E-22 183.4 14.5 161 100-264 33-194 (477)
301 3oja_A Leucine-rich immune mol 99.7 5.4E-18 1.8E-22 187.7 9.7 159 100-264 35-209 (487)
302 1xku_A Decorin; proteoglycan, 99.7 1.2E-16 4E-21 167.8 19.2 161 99-264 76-257 (330)
303 3j0a_A TOLL-like receptor 5; m 99.7 1.8E-17 6.2E-22 196.1 14.5 85 198-285 479-563 (844)
304 2xot_A Amphoterin-induced prot 99.7 1.5E-17 5.2E-22 177.0 12.1 157 100-260 40-203 (361)
305 1p9a_G Platelet glycoprotein I 99.7 5.4E-17 1.8E-21 167.2 15.3 156 98-261 54-210 (290)
306 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 3E-17 1E-21 185.3 14.6 177 100-284 277-512 (562)
307 3o6n_A APL1; leucine-rich repe 99.7 4.6E-17 1.6E-21 175.1 14.7 133 100-237 46-179 (390)
308 2z7x_B TOLL-like receptor 1, v 99.7 2.9E-17 1E-21 183.5 13.0 139 120-265 321-462 (520)
309 4b8c_D Glucose-repressible alc 99.7 1.3E-18 4.5E-23 201.6 1.7 226 30-266 131-361 (727)
310 2z7x_B TOLL-like receptor 1, v 99.7 2.4E-17 8.1E-22 184.3 11.4 161 97-264 322-486 (520)
311 4glp_A Monocyte differentiatio 99.7 2E-17 6.8E-22 172.2 9.8 162 98-261 116-287 (310)
312 1ziw_A TOLL-like receptor 3; i 99.7 6.6E-17 2.3E-21 186.8 14.4 163 99-265 25-190 (680)
313 2ft3_A Biglycan; proteoglycan, 99.7 6.2E-17 2.1E-21 170.1 12.9 155 100-264 55-211 (332)
314 3zyj_A Leucine-rich repeat-con 99.7 1E-16 3.6E-21 175.2 14.9 158 99-262 64-223 (440)
315 3j0a_A TOLL-like receptor 5; m 99.7 6.7E-17 2.3E-21 191.2 14.2 163 100-264 25-192 (844)
316 2id5_A Lingo-1, leucine rich r 99.7 8.9E-17 3E-21 177.6 14.1 166 97-266 54-220 (477)
317 3t6q_A CD180 antigen; protein- 99.7 8.4E-17 2.9E-21 183.3 14.1 163 100-266 34-199 (606)
318 1w8a_A SLIT protein; signaling 99.7 1.3E-16 4.3E-21 153.9 13.2 132 102-240 11-143 (192)
319 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 4.2E-17 1.5E-21 184.1 11.4 160 98-264 352-515 (562)
320 2z63_A TOLL-like receptor 4, v 99.7 6.8E-17 2.3E-21 182.5 13.1 184 98-286 346-535 (570)
321 1ziw_A TOLL-like receptor 3; i 99.7 1.5E-16 5.1E-21 183.8 15.8 186 98-286 404-626 (680)
322 2xwt_C Thyrotropin receptor; s 99.7 9.9E-17 3.4E-21 160.2 12.3 158 100-264 32-198 (239)
323 1w8a_A SLIT protein; signaling 99.7 1E-16 3.5E-21 154.5 11.7 133 126-264 11-144 (192)
324 4ezg_A Putative uncharacterize 99.7 5E-17 1.7E-21 157.4 9.5 150 100-260 45-195 (197)
325 3oja_A Leucine-rich immune mol 99.7 3.6E-17 1.2E-21 181.1 9.3 151 99-264 80-231 (487)
326 3oja_B Anopheles plasmodium-re 99.7 2.1E-16 7.2E-21 179.6 14.7 160 98-261 98-293 (597)
327 2z63_A TOLL-like receptor 4, v 99.7 1.7E-16 5.8E-21 179.2 13.8 163 100-266 29-197 (570)
328 3e6j_A Variable lymphocyte rec 99.7 2.6E-16 8.8E-21 156.2 12.6 136 100-240 41-176 (229)
329 3o53_A Protein LRIM1, AGAP0063 99.7 5.5E-17 1.9E-21 169.4 8.2 147 100-260 35-183 (317)
330 2xot_A Amphoterin-induced prot 99.7 3.2E-16 1.1E-20 166.7 14.1 153 103-262 22-179 (361)
331 2xwt_C Thyrotropin receptor; s 99.7 2.6E-16 8.8E-21 157.2 12.3 160 97-263 53-222 (239)
332 3o6n_A APL1; leucine-rich repe 99.7 5.8E-16 2E-20 166.4 15.4 111 99-213 69-179 (390)
333 1xku_A Decorin; proteoglycan, 99.7 3.7E-16 1.3E-20 164.0 13.1 155 102-264 124-281 (330)
334 2ft3_A Biglycan; proteoglycan, 99.7 4.6E-16 1.6E-20 163.4 13.5 163 97-264 76-258 (332)
335 2z80_A TOLL-like receptor 2, v 99.7 1E-16 3.4E-21 170.0 8.3 162 98-264 75-240 (353)
336 2ell_A Acidic leucine-rich nuc 99.6 3.1E-16 1E-20 147.6 10.2 138 99-242 24-165 (168)
337 3o53_A Protein LRIM1, AGAP0063 99.6 3.4E-16 1.2E-20 163.4 11.0 150 100-259 100-250 (317)
338 3cvr_A Invasion plasmid antige 99.6 3.2E-16 1.1E-20 175.4 11.6 143 98-265 99-249 (571)
339 1h6u_A Internalin H; cell adhe 99.6 9.7E-16 3.3E-20 159.2 13.8 149 99-263 63-212 (308)
340 3zyi_A Leucine-rich repeat-con 99.6 7E-16 2.4E-20 169.3 12.6 158 98-261 122-305 (452)
341 2z81_A CD282 antigen, TOLL-lik 99.6 2.4E-16 8.3E-21 177.2 8.6 161 97-261 48-211 (549)
342 4gyi_A RIO2 kinase; protein ki 99.6 1.2E-16 4E-21 168.5 5.2 134 382-531 100-265 (397)
343 1h6u_A Internalin H; cell adhe 99.6 2.1E-15 7.2E-20 156.7 14.5 148 100-263 42-190 (308)
344 2je0_A Acidic leucine-rich nuc 99.6 6.4E-16 2.2E-20 142.3 8.8 128 99-232 17-149 (149)
345 1h6t_A Internalin B; cell adhe 99.6 1.9E-15 6.4E-20 155.7 13.0 145 100-260 69-214 (291)
346 1h6t_A Internalin B; cell adhe 99.6 2E-15 6.8E-20 155.5 12.4 146 100-261 47-193 (291)
347 1xeu_A Internalin C; cellular 99.6 1.8E-15 6E-20 153.5 11.6 145 100-261 42-187 (263)
348 4g8a_A TOLL-like receptor 4; l 99.6 2E-15 6.9E-20 172.3 12.7 183 99-286 397-584 (635)
349 1m9s_A Internalin B; cell inva 99.6 5E-15 1.7E-19 167.4 14.9 147 99-261 65-212 (605)
350 4ezg_A Putative uncharacterize 99.6 4.1E-15 1.4E-19 143.8 12.0 136 118-262 39-175 (197)
351 3g06_A SSPH2 (leucine-rich rep 99.6 4.9E-15 1.7E-19 167.8 12.9 117 52-186 11-135 (622)
352 2wfh_A SLIT homolog 2 protein 99.6 8.9E-15 3.1E-19 141.0 12.9 125 104-236 15-139 (193)
353 2o6r_A Variable lymphocyte rec 99.6 9.1E-15 3.1E-19 138.8 12.6 114 123-240 28-141 (177)
354 2o6r_A Variable lymphocyte rec 99.6 9.4E-15 3.2E-19 138.6 12.6 133 125-264 9-142 (177)
355 2ell_A Acidic leucine-rich nuc 99.6 1.5E-15 5E-20 142.9 6.9 135 120-260 21-161 (168)
356 2je0_A Acidic leucine-rich nuc 99.6 8.7E-16 3E-20 141.4 5.1 129 121-255 15-149 (149)
357 1dce_A Protein (RAB geranylger 99.6 3.3E-17 1.1E-21 184.2 -6.0 156 99-264 349-551 (567)
358 2wfh_A SLIT homolog 2 protein 99.6 1.5E-14 5E-19 139.5 13.4 128 126-261 13-141 (193)
359 1m9s_A Internalin B; cell inva 99.6 6E-15 2.1E-19 166.8 11.6 146 100-261 44-190 (605)
360 4b8c_D Glucose-repressible alc 99.6 5.6E-16 1.9E-20 179.5 3.2 153 99-264 224-381 (727)
361 3bz5_A Internalin-J, INLJ; leu 99.6 4E-14 1.4E-18 155.3 17.5 142 100-263 86-228 (457)
362 1jl5_A Outer protein YOPM; leu 99.6 1.7E-15 5.7E-20 166.1 6.4 149 99-260 11-187 (454)
363 1o6v_A Internalin A; bacterial 99.6 1.7E-14 5.6E-19 158.9 14.1 147 99-261 199-346 (466)
364 1jl5_A Outer protein YOPM; leu 99.6 2.7E-14 9.1E-19 156.5 15.2 143 100-264 132-274 (454)
365 4fmz_A Internalin; leucine ric 99.5 1.8E-14 6E-19 152.1 13.0 156 99-263 155-328 (347)
366 1o6v_A Internalin A; bacterial 99.5 1.5E-14 5E-19 159.3 12.8 149 99-263 221-370 (466)
367 3bz5_A Internalin-J, INLJ; leu 99.5 2.4E-14 8.1E-19 157.1 14.4 146 97-263 104-250 (457)
368 1xeu_A Internalin C; cellular 99.5 7.5E-15 2.6E-19 148.8 9.5 145 100-261 20-165 (263)
369 4fmz_A Internalin; leucine ric 99.5 1.2E-14 4.2E-19 153.3 11.3 146 100-259 200-346 (347)
370 2ca6_A RAN GTPase-activating p 99.5 6.7E-16 2.3E-20 165.8 0.9 158 99-260 94-288 (386)
371 4ay9_X Follicle-stimulating ho 99.5 2E-14 6.9E-19 152.1 12.2 159 100-261 31-217 (350)
372 2ast_B S-phase kinase-associat 99.5 5.1E-16 1.7E-20 163.1 -0.3 153 100-256 94-257 (336)
373 2ast_B S-phase kinase-associat 99.5 1.7E-15 5.8E-20 159.1 2.8 162 99-265 70-242 (336)
374 2ca6_A RAN GTPase-activating p 99.5 1.7E-15 5.9E-20 162.5 2.3 164 98-261 59-259 (386)
375 1ds9_A Outer arm dynein; leuci 99.5 1.5E-16 5.2E-21 154.1 -6.6 148 101-259 20-185 (198)
376 3goz_A Leucine-rich repeat-con 99.5 3.2E-15 1.1E-19 159.0 2.0 161 100-260 23-210 (362)
377 3g06_A SSPH2 (leucine-rich rep 99.5 2.2E-13 7.6E-18 154.2 13.4 148 100-264 122-302 (622)
378 1a9n_A U2A', U2A'; complex (nu 99.5 3.8E-14 1.3E-18 134.4 6.0 130 99-236 19-153 (176)
379 1a9n_A U2A', U2A'; complex (nu 99.5 1.2E-13 4.2E-18 130.8 9.3 133 117-259 13-153 (176)
380 3goz_A Leucine-rich repeat-con 99.5 1.7E-14 5.9E-19 153.3 3.5 162 103-264 2-185 (362)
381 1dce_A Protein (RAB geranylger 99.4 1.4E-13 4.9E-18 154.6 10.1 121 124-253 442-567 (567)
382 3g39_A Variable lymphocyte rec 99.4 6.1E-13 2.1E-17 125.3 11.0 106 126-238 12-117 (170)
383 2r9u_A Variable lymphocyte rec 99.4 1.1E-12 3.6E-17 124.1 10.9 103 103-236 16-118 (174)
384 1ds9_A Outer arm dynein; leuci 99.4 3E-15 1E-19 145.0 -8.3 138 118-264 13-158 (198)
385 3g39_A Variable lymphocyte rec 99.4 2.2E-12 7.5E-17 121.4 10.7 107 102-215 12-118 (170)
386 2r9u_A Variable lymphocyte rec 99.3 2.5E-12 8.4E-17 121.6 10.6 87 99-186 33-119 (174)
387 4ay9_X Follicle-stimulating ho 99.3 2.2E-12 7.6E-17 136.3 11.1 148 108-261 18-169 (350)
388 1z7x_W Ribonuclease inhibitor; 99.3 1.1E-13 3.9E-18 151.7 -1.0 165 99-264 199-392 (461)
389 1z7x_W Ribonuclease inhibitor; 99.3 2.7E-13 9.1E-18 148.8 0.3 158 100-260 4-184 (461)
390 3tm0_A Aminoglycoside 3'-phosp 99.2 4.5E-11 1.6E-15 120.7 12.2 136 383-529 20-212 (263)
391 2ifg_A High affinity nerve gro 99.2 2.3E-11 7.9E-16 128.2 10.3 97 110-213 20-117 (347)
392 2ifg_A High affinity nerve gro 99.2 3.1E-11 1.1E-15 127.2 8.9 103 127-236 12-116 (347)
393 3un9_A NLR family member X1; l 99.1 1.3E-12 4.4E-17 139.0 -3.5 161 100-261 73-254 (372)
394 1nd4_A Aminoglycoside 3'-phosp 99.1 3.3E-10 1.1E-14 113.8 12.2 129 386-530 29-214 (264)
395 3ogk_B Coronatine-insensitive 99.0 2.3E-11 7.8E-16 137.8 0.4 161 98-261 341-528 (592)
396 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.9E-14 115.8 11.2 141 383-530 44-248 (359)
397 3ogk_B Coronatine-insensitive 99.0 6.4E-11 2.2E-15 134.1 0.1 164 97-261 316-503 (592)
398 3un9_A NLR family member X1; l 98.9 4.6E-11 1.6E-15 127.0 -2.5 139 122-260 71-225 (372)
399 3sb4_A Hypothetical leucine ri 98.9 5E-09 1.7E-13 109.4 11.2 85 171-260 225-311 (329)
400 3sg8_A APH(2'')-ID; antibiotic 98.9 9.5E-10 3.2E-14 113.6 4.7 184 383-582 26-287 (304)
401 3sb4_A Hypothetical leucine ri 98.7 4E-08 1.4E-12 102.5 11.2 101 146-252 225-327 (329)
402 2ra8_A Uncharacterized protein 98.7 1.6E-08 5.5E-13 106.6 6.9 156 100-259 140-320 (362)
403 3rw6_A Nuclear RNA export fact 98.7 1.7E-09 5.9E-14 108.4 -0.6 82 144-229 167-257 (267)
404 2p1m_B Transport inhibitor res 98.6 3.9E-09 1.3E-13 119.3 -0.8 162 98-261 313-496 (594)
405 2p1m_B Transport inhibitor res 98.5 3.5E-09 1.2E-13 119.7 -3.6 161 99-263 289-473 (594)
406 3d1u_A Putative fructosamine-3 98.4 1.2E-06 4.1E-11 89.3 12.1 74 383-461 21-97 (288)
407 3r70_A Aminoglycoside phosphot 98.4 5.4E-07 1.8E-11 93.5 9.5 132 383-531 43-238 (320)
408 1io0_A Tropomodulin; LRR prote 98.4 5.6E-08 1.9E-12 92.4 1.7 121 113-236 26-164 (185)
409 2ra8_A Uncharacterized protein 98.4 3E-08 1E-12 104.5 -1.1 157 98-257 171-341 (362)
410 3tdw_A Gentamicin resistance p 98.4 1.7E-06 5.7E-11 89.2 11.7 136 383-530 25-224 (306)
411 3rw6_A Nuclear RNA export fact 98.2 7.4E-07 2.5E-11 89.2 5.7 99 104-205 148-257 (267)
412 3ats_A Putative uncharacterize 98.2 4.6E-06 1.6E-10 87.7 11.7 81 383-463 26-122 (357)
413 4fdw_A Leucine rich hypothetic 98.1 1.3E-05 4.5E-10 85.6 12.9 149 100-256 158-333 (401)
414 3ovc_A Hygromycin-B 4-O-kinase 98.1 7.1E-06 2.4E-10 86.5 10.7 74 383-462 47-122 (362)
415 4gkh_A Aminoglycoside 3'-phosp 98.1 1.1E-05 3.6E-10 81.3 11.3 135 384-530 31-223 (272)
416 1io0_A Tropomodulin; LRR prote 98.1 1.4E-06 4.7E-11 82.7 3.4 121 139-259 28-164 (185)
417 4fdw_A Leucine rich hypothetic 98.0 1.9E-05 6.6E-10 84.3 11.5 148 100-259 136-284 (401)
418 2olc_A MTR kinase, methylthior 97.8 6.8E-05 2.3E-09 80.0 11.5 74 383-459 36-120 (397)
419 2q83_A YTAA protein; 2635576, 97.8 5.5E-05 1.9E-09 78.7 10.3 141 384-529 39-251 (346)
420 3f7w_A Putative fructosamine-3 97.6 0.00043 1.5E-08 70.2 13.1 74 383-461 21-97 (288)
421 2pyw_A Uncharacterized protein 97.6 0.00017 5.9E-09 77.5 10.0 77 500-579 232-313 (420)
422 3jr1_A Putative fructosamine-3 97.5 0.00041 1.4E-08 71.2 10.6 138 383-526 42-232 (312)
423 3csv_A Aminoglycoside phosphot 97.1 0.0027 9.3E-08 65.6 12.3 141 384-530 25-217 (333)
424 3dxq_A Choline/ethanolamine ki 97.0 0.0033 1.1E-07 64.0 11.6 70 383-461 24-95 (301)
425 3e4g_A ATP synthase subunit S, 97.0 0.00027 9.4E-09 65.6 2.7 59 124-182 62-124 (176)
426 2ppq_A HSK, HK, homoserine kin 96.9 0.0025 8.5E-08 65.5 9.0 143 384-529 29-216 (322)
427 1zyl_A Hypothetical protein YI 96.8 0.01 3.4E-07 61.0 12.6 141 385-530 34-223 (328)
428 3rfe_A Platelet glycoprotein I 96.7 0.0019 6.6E-08 56.9 6.1 54 104-159 13-67 (130)
429 3e4g_A ATP synthase subunit S, 96.7 0.00094 3.2E-08 61.9 4.2 83 99-182 61-149 (176)
430 1nw1_A Choline kinase (49.2 KD 96.7 0.0043 1.5E-07 66.7 9.6 72 383-461 79-159 (429)
431 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00056 1.9E-08 64.7 2.3 67 118-185 36-111 (197)
432 4gt6_A Cell surface protein; l 96.4 0.01 3.5E-07 62.8 10.4 131 118-258 260-390 (394)
433 1pgv_A TMD-1, tropomodulin TMD 96.4 0.0015 5.2E-08 61.7 2.9 65 98-162 40-113 (197)
434 3c5i_A Choline kinase; choline 96.3 0.0099 3.4E-07 62.4 9.5 73 383-461 39-121 (369)
435 2yle_A Protein spire homolog 1 96.3 0.029 1E-06 53.3 11.5 103 459-581 33-135 (229)
436 3rfe_A Platelet glycoprotein I 96.3 0.0059 2E-07 53.7 6.3 57 175-236 11-68 (130)
437 2qg7_A Ethanolamine kinase PV0 96.2 0.028 9.5E-07 60.7 12.0 73 383-461 114-188 (458)
438 3i1a_A Spectinomycin phosphotr 95.9 0.044 1.5E-06 56.6 11.7 68 386-461 32-108 (339)
439 3feg_A Choline/ethanolamine ki 95.8 0.03 1E-06 58.9 9.9 140 384-529 57-253 (379)
440 4fs7_A Uncharacterized protein 95.5 0.062 2.1E-06 56.7 11.3 127 119-256 249-376 (394)
441 4gt6_A Cell surface protein; l 95.5 0.029 9.9E-07 59.3 8.7 127 99-236 265-391 (394)
442 4h09_A Hypothetical leucine ri 95.1 0.063 2.2E-06 56.2 9.7 133 116-256 210-343 (379)
443 3f2s_A CK, chetk-alpha, cholin 95.0 0.076 2.6E-06 56.1 9.6 141 384-529 59-279 (401)
444 4h09_A Hypothetical leucine ri 94.8 0.12 4.1E-06 54.0 10.8 130 119-256 190-320 (379)
445 4fs7_A Uncharacterized protein 94.8 0.086 3E-06 55.6 9.6 123 100-233 254-376 (394)
446 2k1k_A Ephrin type-A receptor 94.1 0.036 1.2E-06 36.7 2.9 26 294-319 6-31 (38)
447 3mes_A Choline kinase; malaria 93.6 0.35 1.2E-05 51.4 11.4 72 384-461 77-157 (424)
448 3cxl_A N-chimerin; SH2, RHO-GA 86.0 0.098 3.3E-06 56.5 -1.4 58 383-443 148-214 (463)
449 2jwa_A Receptor tyrosine-prote 85.7 0.89 3E-05 31.0 3.7 7 301-307 14-20 (44)
450 2l2t_A Receptor tyrosine-prote 85.6 0.92 3.1E-05 30.9 3.8 7 304-310 12-18 (44)
451 3g15_A CK, chetk-alpha, cholin 85.5 2.3 7.7E-05 44.7 9.0 29 502-530 246-280 (401)
452 2k9y_A Ephrin type-A receptor 83.0 1.1 3.9E-05 30.1 3.4 27 301-327 12-39 (41)
453 2l2t_A Receptor tyrosine-prote 82.0 1.5 5.1E-05 29.9 3.6 18 299-316 10-27 (44)
454 4ano_A ESSB; membrane protein, 80.9 4.5 0.00015 38.4 8.0 113 431-582 48-162 (219)
455 4ann_A ESSB; membrane protein, 78.1 4.4 0.00015 38.3 6.9 113 431-582 43-157 (215)
456 2jwa_A Receptor tyrosine-prote 64.3 4.2 0.00015 27.6 2.4 17 302-318 11-27 (44)
457 2l34_A TYRO protein tyrosine k 64.0 4.8 0.00016 25.6 2.4 23 296-318 4-26 (33)
458 2klu_A T-cell surface glycopro 48.2 20 0.00068 26.5 3.8 18 304-321 12-29 (70)
459 2k1k_A Ephrin type-A receptor 35.9 45 0.0016 21.8 3.7 26 297-322 5-30 (38)
460 2l8s_A Integrin alpha-1; trans 29.7 66 0.0022 22.8 3.9 12 305-316 13-24 (54)
461 3ox7_P MH027; urokinase-type p 28.0 14 0.00049 20.2 0.2 9 61-69 6-14 (23)
462 3ls8_A Phosphatidylinositol 3- 25.7 4.1E+02 0.014 29.1 11.5 73 450-529 414-501 (614)
463 2knc_A Integrin alpha-IIB; tra 22.9 80 0.0027 22.4 3.4 12 305-316 16-27 (54)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-55 Score=454.90 Aligned_cols=254 Identities=19% Similarity=0.326 Sum_probs=207.5
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
++.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+ .+..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEEEEEc
Confidence 478999999999999864 477899999987665566789999999999999999999999998 6789999999
Q ss_pred cCCCChHHHhhccc---------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecc
Q 005749 456 FPSRTLHDLLHDTI---------AGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526 (679)
Q Consensus 456 ~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 526 (679)
|++|||.++|+... .....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997642 12356999999999999999999999988 9999999999999999999999999
Q ss_pred cccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcc
Q 005749 527 LDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEE 604 (679)
Q Consensus 527 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~ 604 (679)
+|+........ ......||+.|||||++.++.|+.|+|||||||++|||+| |+.||.+.... ++ ..
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~---~~---~~------ 241 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EV---IE------ 241 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HH---HH------
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HH---HH------
Confidence 99876443322 2234568999999999999999999999999999999998 89999543221 11 11
Q ss_pred cccccchHhhhhcCCCCh-HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 605 TTMEVFDMEIMKGIRSPM-EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 605 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+..+.+.+. +...+++.+++.+||+.||++||||+||++.|+++.+
T Consensus 242 --------~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 242 --------CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp --------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1122222111 2233567789999999999999999999999998754
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.3e-55 Score=458.05 Aligned_cols=255 Identities=19% Similarity=0.301 Sum_probs=202.8
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
.+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+ .+..+|||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEEc
Confidence 478999999999999864 478999999987665567789999999999999999999999997 6789999999
Q ss_pred cCCCChHHHhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEee
Q 005749 456 FPSRTLHDLLHDTIA-----------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTE 524 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 524 (679)
|++|+|.++++.... ...+++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 999999999976432 1246999999999999999999999988 99999999999999999999999
Q ss_pred cccccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhh
Q 005749 525 FGLDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVL 602 (679)
Q Consensus 525 FGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~ 602 (679)
||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... ++ +.
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~---~~---~~---- 271 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT---EA---ID---- 271 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH---HH---HH----
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH---HH---HH----
Confidence 9999976443222 2345679999999999999999999999999999999999 89999543221 11 11
Q ss_pred cccccccchHhhhhcCCCCh-HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 603 EETTMEVFDMEIMKGIRSPM-EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 603 ~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.+..+.+.+. +...+++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 272 ----------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 ----------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ----------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1112221111 22345677899999999999999999999999988643
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-55 Score=453.33 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=205.9
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.+ .+..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEEEEE
Confidence 468999999999999863 467999999976533 345689999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEE
Q 005749 455 YFPSRTLHDLLHDTIA------------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRL 522 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl 522 (679)
||++|||.++|..... ....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 9999999999975421 1245999999999999999999999988 999999999999999999999
Q ss_pred eecccccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHH
Q 005749 523 TEFGLDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVA 600 (679)
Q Consensus 523 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~ 600 (679)
+|||+|+........ ......||+.|||||++.++.|+.++|||||||+||||+| |+.||.+.... ++..
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~---~~~~----- 258 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVVE----- 258 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH---HHHH-----
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH---HHHH-----
Confidence 999999976443322 2345679999999999999999999999999999999998 89999553321 1111
Q ss_pred hhcccccccchHhhhhcCCCC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhh
Q 005749 601 VLEETTMEVFDMEIMKGIRSP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEEN 657 (679)
Q Consensus 601 ~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 657 (679)
.+..+.+.+ .+....++.+++.+||+.||++||||+||++.|+.+
T Consensus 259 ------------~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 ------------MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ------------HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 112222222 223345677899999999999999999999999875
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-54 Score=445.60 Aligned_cols=256 Identities=21% Similarity=0.334 Sum_probs=198.6
Q ss_pred hcCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 381 TGQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.++.||+|+||+||+|++++ .||||+++.... ...+.|.+|+++|++++|||||+++|++.. +..+||||||++
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iVmEy~~g 115 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQWCEG 115 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEECCSS
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEEEEcCCC
Confidence 34789999999999999753 699999975432 335679999999999999999999998864 578999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc-cc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV-AD 537 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~-~~ 537 (679)
|+|.++++.. ...++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+...... ..
T Consensus 116 GsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 116 SSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999764 346999999999999999999999988 9999999999999999999999999998764332 22
Q ss_pred chhcccccccccccccccc---cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 538 EMVALAKADGYKAPELQRM---KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.....+||+.|||||++.+ +.|+.|+|||||||++|||+||+.||.+....+ .+........ ..+.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~------~~~~~~~~~~----~~p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGY----ASPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHTTC----CCCCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcCC----CCCCc
Confidence 3456689999999999863 468999999999999999999999995433211 1111111100 00000
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
. ...+....++.+++.+||+.||++||||.||++.|+.++..
T Consensus 260 ~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 S----KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T----TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred c----cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 0 01112335677899999999999999999999999987643
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-52 Score=439.36 Aligned_cols=244 Identities=16% Similarity=0.236 Sum_probs=203.4
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||+++++|.+ .+..|||||||++|+|
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECCCTTEEH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeCCCCCcH
Confidence 5799999999999994 5799999999987666667889999999999999999999999998 6899999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++.. ..+++.+++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+... ......
T Consensus 159 ~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~ 229 (346)
T 4fih_A 159 TDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKS 229 (346)
T ss_dssp HHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SCCBCC
T ss_pred HHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC-CCcccc
Confidence 999975 34899999999999999999999998 999999999999999999999999999876433 223456
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSP 621 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 621 (679)
.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .....+.. ... + ....
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i~~----~~~-----~-----~~~~ 292 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMIRD----NLP-----P-----RLKN 292 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHH----SSC-----C-----CCSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHHc----CCC-----C-----CCCc
Confidence 78999999999999999999999999999999999999999543211 11111110 000 0 0011
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 622 MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 622 ~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.....+++.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234567789999999999999999999874
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-52 Score=440.97 Aligned_cols=244 Identities=18% Similarity=0.292 Sum_probs=196.4
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+ ++..|||||||++|
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVMDYCEGG 108 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEeCCCCC
Confidence 789999999999999 5679999999997643 2335679999999999999999999999998 68999999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++.... ...+++.+++.|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.+... ....
T Consensus 109 ~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~ 182 (350)
T 4b9d_A 109 DLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELA 182 (350)
T ss_dssp BHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHH
T ss_pred cHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC-cccc
Confidence 9999997542 345799999999999999999999998 999999999999999999999999999977432 2223
Q ss_pred hcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 540 VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... .+.... +..+..
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~--------------i~~~~~ 242 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLK--------------IISGSF 242 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH--------------HHHTCC
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHH--------------HHcCCC
Confidence 456899999999999999999999999999999999999999954321 111111 111111
Q ss_pred -CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 620 -SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 620 -~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+......+++.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112233567789999999999999999999863
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.6e-52 Score=433.54 Aligned_cols=247 Identities=18% Similarity=0.208 Sum_probs=198.9
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||+||+|+ ..+|+.||||+++... .+.+|+++|++++|||||++++++.+ .+..|||||||++|+
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCCTTCB
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeccCCCc
Confidence 3679999999999999 4579999999997532 23579999999999999999999997 688999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-ceEEeecccccccCccccc--
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF-VSRLTEFGLDQLMVPAVAD-- 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~-- 537 (679)
|.++++.. ..+++.+++.|+.||+.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.+......
T Consensus 137 L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 137 LGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999864 45999999999999999999999988 99999999999999987 6999999999976543211
Q ss_pred --chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 538 --EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 538 --~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.. ..+. .... ..
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i~---~~~~-------~~- 275 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC---LKIA---SEPP-------PI- 275 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---HHHH---HSCC-------GG-
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHHH---cCCC-------Cc-
Confidence 123457999999999999999999999999999999999999999654433211 1110 0000 00
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
... .+...+.+.+++.+||+.||++|||+.|+++.|....
T Consensus 276 ~~~---~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 276 REI---PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp GGS---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhc---CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 000 1122356778999999999999999999999887653
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.9e-52 Score=432.90 Aligned_cols=267 Identities=23% Similarity=0.264 Sum_probs=196.3
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCC---CceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR---GEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~---~~~~lv~ey~~~ 458 (679)
++.||+|+||+||+|++ +|+.||||+++.... ....+.+|+..+.+++|||||+++|+|.+.. ...+||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 47899999999999998 589999999975321 1122345666677899999999999998633 257999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH-----EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
|+|.++++. ..++|..+.+|+.|+++||+|||++. .++||||||||+|||+|+++++||+|||+|+....
T Consensus 86 gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 86 GSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 999999975 34899999999999999999999862 34599999999999999999999999999987643
Q ss_pred cccc---chhccccccccccccccccc------CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCccc--c------hhHH
Q 005749 534 AVAD---EMVALAKADGYKAPELQRMK------KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFV--D------LPSI 596 (679)
Q Consensus 534 ~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~--~------l~~~ 596 (679)
.... .....+||+.|||||++.+. .+++|+|||||||++|||+||+.|+......+.. . ....
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 3221 22345799999999998754 4678999999999999999998887433221110 0 0011
Q ss_pred HHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 597 VKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 597 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
......+ +.+++.+... ....+....+.+++.+||+.||++||||.||++.|+++...+
T Consensus 241 ~~~~~~~----~~~rp~~p~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 241 MRKVVCE----QKLRPNIPNR--WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHTT----SCCCCCCCGG--GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHhc----ccCCCCCCcc--ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111111 0111111110 011244567789999999999999999999999999986543
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-52 Score=443.34 Aligned_cols=257 Identities=20% Similarity=0.316 Sum_probs=208.0
Q ss_pred hcCccccCCceEEEEEEeCC------CCEEEEEEcccCcc-cCcccHHHHHHHHhccCC-CCCccceEEeeCCCCceEEE
Q 005749 381 TGQVIEKTTYGTAYKAKLAD------GATIALRLLREGSC-KDRSSCLPVIRQLGKVRH-ENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~~~~~lv 452 (679)
.++.||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+|....+..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 35789999999999998532 35899999976543 335679999999999965 89999999997655678999
Q ss_pred EEecCCCChHHHhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCce
Q 005749 453 YDYFPSRTLHDLLHDTIA------------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVS 520 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~ 520 (679)
||||++|+|.++|+.... ....++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCE
Confidence 999999999999975421 1345899999999999999999999988 9999999999999999999
Q ss_pred EEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHH
Q 005749 521 RLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVK 598 (679)
Q Consensus 521 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~ 598 (679)
||+|||+|+.+..... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ .+
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~- 297 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EF- 297 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HH-
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HH-
Confidence 9999999997644322 22345678999999999999999999999999999999998 899996543221 11
Q ss_pred HHhhcccccccchHhhhhcCCCCh-HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 599 VAVLEETTMEVFDMEIMKGIRSPM-EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 599 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
...+..+.+... +...+++.+++.+||+.||++||||.||+++|+++.+
T Consensus 298 ------------~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 298 ------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp ------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 111222222222 2234567889999999999999999999999998754
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6e-52 Score=426.02 Aligned_cols=243 Identities=20% Similarity=0.332 Sum_probs=194.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCC---CCceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK---RGEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~---~~~~~lv~ey~ 456 (679)
+.||+|+||+||+|+. .++..||+|++.... ....+.|.+|+++|++++|||||+++++|.+. .+..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 5799999999999994 568999999997543 23356799999999999999999999998642 34579999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCceEEeecccccccCccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD-FFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 535 (679)
++|+|.++++.. ..+++..++.|+.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+.....
T Consensus 112 ~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 112 TSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred CCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 999999999863 45899999999999999999999875 45999999999999984 799999999999865332
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.... ....... .
T Consensus 186 --~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-----~~~~~~i--------------~ 243 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRV--------------T 243 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHH--------------T
T ss_pred --ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-----HHHHHHH--------------H
Confidence 2345689999999998864 6999999999999999999999999543221 1111111 1
Q ss_pred hcCCCC--hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSP--MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~--~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+..+. .....+++.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 244 SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111110 01122467789999999999999999999863
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.2e-52 Score=429.34 Aligned_cols=244 Identities=19% Similarity=0.287 Sum_probs=202.7
Q ss_pred hcCccccCCceEEEEEE-eCCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 381 TGQVIEKTTYGTAYKAK-LADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
..++||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+ .+..|+|||||
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yivmEy~ 114 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFGLSYA 114 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEECCC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEecC
Confidence 35789999999999999 5679999999997542 2345678999999999999999999999998 68899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc-
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV- 535 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~- 535 (679)
++|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.+....
T Consensus 115 ~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 115 KNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999864 45999999999999999999999998 9999999999999999999999999999875432
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.. +... .+.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~--------------~i~ 247 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFA--------------KII 247 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH--------------HHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHH--------------HHH
Confidence 22345678999999999999999999999999999999999999999543211 1111 111
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
.+.....+...+++.+++.+||+.||++|||++|++.
T Consensus 248 ~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 248 KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp HTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred cCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1111111223356778999999999999999998753
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.7e-51 Score=440.00 Aligned_cols=244 Identities=16% Similarity=0.241 Sum_probs=203.3
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
+.||+|+||+||+|+ ..+|+.||||++........+.+.+|+++|++++|||||+++++|.+ .+..|||||||++|+|
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTEEH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeCCCCCcH
Confidence 679999999999999 45799999999987666667889999999999999999999999998 6899999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.++++. ..+++.++..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+... ......
T Consensus 236 ~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~ 306 (423)
T 4fie_A 236 TDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKS 306 (423)
T ss_dssp HHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CCCBCC
T ss_pred HHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCC-Cccccc
Confidence 999975 24899999999999999999999998 999999999999999999999999999876443 223456
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSP 621 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 621 (679)
.+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .....+. ... .+. ...
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i~----~~~-----~~~-----~~~ 369 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMIR----DNL-----PPR-----LKN 369 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHH----HSC-----CCC-----CSC
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHH----cCC-----CCC-----Ccc
Confidence 78999999999999999999999999999999999999999543221 1111111 000 000 011
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 622 MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 622 ~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.....+++.+|+.+||+.||++|||++|++++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11223567789999999999999999999874
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.4e-51 Score=416.01 Aligned_cols=241 Identities=19% Similarity=0.315 Sum_probs=185.8
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+ .+..|+|||||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEEeCC-
Confidence 3789999999999999 5679999999997543 2234578999999999999999999999998 68899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++.+++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+..... .
T Consensus 96 ~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~ 166 (275)
T 3hyh_A 96 GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--N 166 (275)
T ss_dssp CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC--C
Confidence 67999999763 45999999999999999999999998 999999999999999999999999999876432 2
Q ss_pred chhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 538 EMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.....+||+.|||||++.+..| +.++||||+||++|||++|+.||.+... ....+. +..
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~~~--------------i~~ 226 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKN--------------ISN 226 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH--------------HHH
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHH--------------HHc
Confidence 3345789999999999998776 5799999999999999999999954321 111111 111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.........+++.+++.+||+.||++|||++|++++
T Consensus 227 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1111111223567789999999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.9e-51 Score=423.08 Aligned_cols=242 Identities=20% Similarity=0.276 Sum_probs=191.3
Q ss_pred cCccccCCceEEEEEEe----CCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL----ADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~----~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
.+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++|++++|||||++++++.+ ++..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEEEc
Confidence 47899999999999984 247899999997643 2334578899999999999999999999998 6899999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
|++|+|.+++... ..+++.+++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 108 ~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH- 179 (304)
T ss_dssp CTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC-
Confidence 9999999999864 45999999999999999999999998 999999999999999999999999999865332
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+.. +.... +.
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~--------------i~ 239 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTM--------------IL 239 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH--------------HH
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHH--------------HH
Confidence 22334678999999999999999999999999999999999999999543221 11111 11
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTM-----DEVVK 652 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~-----~evl~ 652 (679)
.+.....+...+++.+++.+||+.||++|||+ +|+++
T Consensus 240 ~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 240 KAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred cCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11111112234567789999999999999985 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-49 Score=411.96 Aligned_cols=246 Identities=17% Similarity=0.267 Sum_probs=185.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCC-----------Cc
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-----------GE 448 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-----------~~ 448 (679)
.+.||+|+||+||+|+ ..+|+.||||+++.... ...+.+.+|+++|++++|||||+++++|.+.+ ..
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 3789999999999999 45799999999975432 23467899999999999999999999987532 23
Q ss_pred eEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 449 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
.|+|||||++|+|.+++..... ....++..++.|+.||++||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCccc
Confidence 6899999999999999986432 233567888999999999999999998 999999999999999999999999999
Q ss_pred cccCccccc-----------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHH
Q 005749 529 QLMVPAVAD-----------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 529 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~ 597 (679)
+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.+.. +.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~~~ 237 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVRTL 237 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHHHH
Confidence 876443211 1234579999999999999999999999999999999996 773210 000000
Q ss_pred HHHhhcccccccchHhhhhcCCCC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 598 KVAVLEETTMEVFDMEIMKGIRSP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. .+.....++ .....+...+++.+||+.||++|||+.|+++.
T Consensus 238 ~--------------~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 238 T--------------DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp H--------------HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H--------------HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 011111111 22334566789999999999999999999873
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=411.04 Aligned_cols=262 Identities=19% Similarity=0.273 Sum_probs=197.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCC-----CCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-----RGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~~~~lv~ 453 (679)
.+.||+|+||+||+|+ ..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... .+..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 3689999999999999 46799999999975432 2345688999999999999999999987642 35789999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
|||+ |+|.+++.. ...+++.+++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+..
T Consensus 139 E~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 139 DLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp ECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred eCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9996 689999976 356999999999999999999999998 99999999999999999999999999987643
Q ss_pred cc---ccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHh--hccccc
Q 005749 534 AV---ADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAV--LEETTM 607 (679)
Q Consensus 534 ~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~--~~~~~~ 607 (679)
.. .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....+. +..+..... ......
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~--l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ--LQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH--HHHHHHHHCCCCGGGTC
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH--HHHHHHhcCCCChHHhh
Confidence 21 1234467899999999998765 569999999999999999999999965432211 111111110 000000
Q ss_pred ccc---hHhhhhc----CCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 608 EVF---DMEIMKG----IRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 608 ~~~---~~~i~~~----~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
... ....... ...+.. ...+++.+|+.+||..||++|||++|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 0000000 001111 123567899999999999999999999875
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4e-45 Score=384.27 Aligned_cols=273 Identities=28% Similarity=0.425 Sum_probs=226.9
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..+++.||||++........+.+.+|++++++++||||+++++++.+ .+..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-RNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-TTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEEcCCCCcH
Confidence 378999999999999988899999999887655556789999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-cchh
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA-DEMV 540 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~ 540 (679)
.+++.........+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....... ....
T Consensus 123 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 9999765443456999999999999999999999988 99999999999999999999999999986532211 1223
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 541 ALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
...||+.|+|||++.+..++.++||||||+++|||++|+.||......+......|...........+.+++.+.. .
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 276 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD---K 276 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT---C
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc---c
Confidence 4468999999999988899999999999999999999999997766655556666655444444444444433222 2
Q ss_pred ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 621 PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 621 ~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..+.....+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 34566778889999999999999999999999999886543
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-45 Score=391.26 Aligned_cols=192 Identities=20% Similarity=0.333 Sum_probs=163.5
Q ss_pred cCccccCCceEEEEEEe----CCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL----ADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~----~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||+||+|+. .+++.||+|++.... ....+.+|+++|.++ +|||||+++++|.+ .++.|+|||||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~~lvmE~~ 102 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHVVIAMPYL 102 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEEEEEEECC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEEEEEEeCC
Confidence 36899999999999984 246799999986542 345688999999998 69999999999987 68999999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CceEEeecccccccCccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-FVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 535 (679)
++|+|.++++. +++.+++.|+.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 103 ~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 103 EHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred CcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999842 899999999999999999999998 9999999999999877 799999999998653221
Q ss_pred c---------------------------cchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 005749 536 A---------------------------DEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGR 586 (679)
Q Consensus 536 ~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~ 586 (679)
. ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1 112345799999999998865 48999999999999999999999996543
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8e-45 Score=382.65 Aligned_cols=287 Identities=30% Similarity=0.506 Sum_probs=232.1
Q ss_pred ccccHHHHHHhhc-----CccccCCceEEEEEEeCCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEee
Q 005749 370 EHLTLEDVLNATG-----QVIEKTTYGTAYKAKLADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQ 443 (679)
Q Consensus 370 ~~~~~~~l~~~~~-----~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 443 (679)
..++++++....+ +.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 4567777776654 68999999999999988899999999976543 33457899999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEe
Q 005749 444 GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLT 523 (679)
Q Consensus 444 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 523 (679)
+ .+..++||||+++|+|.+++.........+++..++.|+.|++.||+|||+++.++|+||||||+|||+++++.+||+
T Consensus 98 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 T-PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp C-SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred c-CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 7 678899999999999999998765555679999999999999999999999833339999999999999999999999
Q ss_pred ecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCC--CCCcccchhHHHHHHh
Q 005749 524 EFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSG--RNGEFVDLPSIVKVAV 601 (679)
Q Consensus 524 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~--~~~~~~~l~~~~~~~~ 601 (679)
|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||... ..........|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999876544333344556999999999998888999999999999999999999999521 1122334455555544
Q ss_pred hcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 602 LEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 602 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.........+..... .........+.+++.+||+.||++|||++||+++|++....
T Consensus 257 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 257 KEKKLEALVDVDLQG---NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp SSCCSTTSSCTTCTT---SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hchhhhhhcChhhcc---ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 444444444443222 33466778899999999999999999999999999976543
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.2e-45 Score=407.71 Aligned_cols=244 Identities=18% Similarity=0.238 Sum_probs=194.8
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc---ccCcccHHHH---HHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS---CKDRSSCLPV---IRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E---i~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.++||+|+||+||+|+ ..+|+.||||+++... ......+.+| +++++.++|||||+++++|.+ .+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEEEEEEe
Confidence 4789999999999999 4579999999996532 1222233444 566778899999999999998 689999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
||+||+|.+++... ..+++..++.|+.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 273 y~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 273 LMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 99999999999864 45999999999999999999999998 999999999999999999999999999876433
Q ss_pred cccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 535 VADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
...+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+.. .....
T Consensus 346 ---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~---~i~~~-------------- 405 (689)
T 3v5w_A 346 ---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRM-------------- 405 (689)
T ss_dssp ---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH---HHHHH--------------
T ss_pred ---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHh--------------
Confidence 2345789999999999974 57999999999999999999999999654332211 11111
Q ss_pred hhhcCCCChHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 005749 614 IMKGIRSPMEEGLVQALKLAMGCCAPVASVRPT-----MDEVVKQ 653 (679)
Q Consensus 614 i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~evl~~ 653 (679)
+............+++.+++.+||+.||++|++ ++||+++
T Consensus 406 i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 406 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred hcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111111111223456778999999999999998 6787764
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-45 Score=413.30 Aligned_cols=247 Identities=16% Similarity=0.270 Sum_probs=202.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||+||+|+ ..+|+.||+|++......+.+.+.+|+++|++++|||||+++++|.+ .+..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeecCCCc
Confidence 4789999999999999 46799999999977655556788999999999999999999999998 689999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CceEEeecccccccCcccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF--FVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~~~~~~~ 538 (679)
|.+++... ...+++.++..|+.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+.... .
T Consensus 241 L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--~ 312 (573)
T 3uto_A 241 LFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--S 312 (573)
T ss_dssp HHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--E
T ss_pred HHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCC--c
Confidence 99999653 345899999999999999999999998 9999999999999854 899999999999875432 2
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... +.......... .+...
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~~~~~i~~~~~---~~~~~----- 378 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLRNVKSCDW---NMDDS----- 378 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCC---CCCSG-----
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHhCCC---CCCcc-----
Confidence 34568999999999999999999999999999999999999999653321 11111000000 00000
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
......+++.+|+.+||+.||++|||+.|++++
T Consensus 379 --~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 --AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011123567789999999999999999999874
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=367.69 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=205.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
++.||+|+||+||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++.+ .+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEecCCCc
Confidence 47899999999999995 5699999999876555566789999999999999999999999987 688999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc--
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE-- 538 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~-- 538 (679)
|.++++.. ...+++.+++.|+.|+++||+|||+++ |+||||||+|||+++++.+||+|||+++.........
T Consensus 94 L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 94 LRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp HHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999864 345899999999999999999999988 9999999999999999999999999998764322111
Q ss_pred -----------hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccc
Q 005749 539 -----------MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTM 607 (679)
Q Consensus 539 -----------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (679)
.....||+.|+|||++.+..++.++||||||+++|||++|..|+...........
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-------------- 233 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-------------- 233 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--------------
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--------------
Confidence 1145799999999999999999999999999999999999999854332211100
Q ss_pred ccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 608 EVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 608 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
........... .+...+.+.+++.+||+.||++|||++|+++.|+++..
T Consensus 234 ~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 234 LNVRGFLDRYC---PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp BCHHHHHHHTC---CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhccccccC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00000000000 11122456789999999999999999999999998864
No 23
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=374.22 Aligned_cols=245 Identities=20% Similarity=0.300 Sum_probs=192.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-ANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEEEeCCCCC
Confidence 3789999999999999 4679999999997653 2345678999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++...........
T Consensus 94 ~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 166 (347)
T 3zgw_A 94 ELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166 (347)
T ss_dssp BHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccc
Confidence 999999764 35899999999999999999999988 99999999999999999999999999987644433344
Q ss_pred hcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 540 VALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+... ..... .+..+.
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------~~~~~--------------~i~~~~ 226 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV------MALYK--------------KIMRGK 226 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH--------------HHHHTC
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH------HHHHH--------------HHHcCC
Confidence 56689999999999987775 8999999999999999999999954321 11111 111111
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
........+.+.+++.+||+.||++|||++|+++.-
T Consensus 227 ~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 227 YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 111122235667899999999999999999999863
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5e-43 Score=358.54 Aligned_cols=250 Identities=20% Similarity=0.377 Sum_probs=206.2
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++.+ .+..++||||+++++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEECCTTCBH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEeCCCCcH
Confidence 37899999999999998889999999997643 235679999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++............
T Consensus 93 ~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 93 SDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999764 345899999999999999999999988 9999999999999999999999999998765443333444
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR- 619 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~- 619 (679)
..+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... +..+..
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~--------------~~~~~~~ 226 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVED--------------ISTGFRL 226 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHH--------------HHTTCCC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHH--------------HhcCccC
Confidence 567788999999998899999999999999999999 99998543211 11111 111111
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.........+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1111123567789999999999999999999999998754
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=8.8e-43 Score=373.73 Aligned_cols=253 Identities=22% Similarity=0.361 Sum_probs=203.8
Q ss_pred cCccccCCceEEEEEEe--------CCCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEE
Q 005749 382 GQVIEKTTYGTAYKAKL--------ADGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLL 451 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~--------~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~l 451 (679)
++.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++++ +|||||+++++|.+ .+..++
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~~~~~l 164 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYV 164 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-SSSCEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-CCCEEE
Confidence 47899999999999984 2355799999976532 3346789999999999 89999999999987 678999
Q ss_pred EEEecCCCChHHHhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc
Q 005749 452 IYDYFPSRTLHDLLHDTIA------------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519 (679)
Q Consensus 452 v~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 519 (679)
||||+++|+|.+++..... ....+++..++.++.||++||+|||+++ |+||||||+|||++.++.
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~ 241 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNV 241 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCC
Confidence 9999999999999986432 1235899999999999999999999988 999999999999999999
Q ss_pred eEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHH
Q 005749 520 SRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~ 597 (679)
+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+...
T Consensus 242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~~~~~- 317 (370)
T 2psq_A 242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELFKL- 317 (370)
T ss_dssp EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH-
T ss_pred EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH-
Confidence 99999999986643322 22234467789999999998999999999999999999999 99998543221 11111
Q ss_pred HHHhhcccccccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 598 KVAVLEETTMEVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
+..+.+. .......++.+++.+||+.||++||++.|+++.|+++.
T Consensus 318 ----------------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 318 ----------------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ----------------HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111111 11223356778999999999999999999999999875
No 26
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8e-43 Score=356.67 Aligned_cols=252 Identities=20% Similarity=0.358 Sum_probs=205.8
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCChH
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTLH 462 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL~ 462 (679)
+.||+|+||.||+|+..++..||+|+++... ...+.+.+|++++.+++||||+++++++.+ .+..++||||+++++|.
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCTTCBHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEccCCCcHH
Confidence 7899999999999999888899999997643 234678999999999999999999999987 67899999999999999
Q ss_pred HHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhcc
Q 005749 463 DLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVAL 542 (679)
Q Consensus 463 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 542 (679)
+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.............
T Consensus 92 ~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 165 (268)
T 3sxs_A 92 NYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT 165 (268)
T ss_dssp HHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSC
T ss_pred HHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCC
Confidence 999764 235899999999999999999999988 99999999999999999999999999987654433333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-C
Q 005749 543 AKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR-S 620 (679)
Q Consensus 543 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 620 (679)
.+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...... ..+.. .
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~--------------~~~~~~~ 225 (268)
T 3sxs_A 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLKV--------------SQGHRLY 225 (268)
T ss_dssp CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHH--------------HTTCCCC
T ss_pred CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHHH--------------HcCCCCC
Confidence 56778999999988889999999999999999999 99998543211 111100 11111 1
Q ss_pred ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 621 PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 621 ~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
......+.+.+++.+||+.||++|||++|+++.|+++.++++
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 111123467789999999999999999999999999976543
No 27
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.7e-43 Score=366.52 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=195.7
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+ .+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-PPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-TTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCceEEEEecCCCC
Confidence 47899999999999987 588999999876532 224578999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++..... ...+++..++.++.|++.||+|||+++ ++|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 120 ~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSS 196 (309)
T ss_dssp BHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-------------
T ss_pred cHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc-cccc
Confidence 99999976321 123899999999999999999999875 45999999999999999999999999999865332 1223
Q ss_pred hcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 540 VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +......... ...
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~~~------------~~~ 258 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGFKC------------KRL 258 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHHSC------------CCC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcC------------CCC
Confidence 4557899999999999999999999999999999999999999543211 1111100000 000
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
.......+++.+++.+||+.||++|||++|+++.|+.+....
T Consensus 259 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 111122356778999999999999999999999999987553
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.1e-42 Score=363.62 Aligned_cols=257 Identities=17% Similarity=0.233 Sum_probs=207.7
Q ss_pred ccccHHHHHHhhc---------------CccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCC
Q 005749 370 EHLTLEDVLNATG---------------QVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHE 433 (679)
Q Consensus 370 ~~~~~~~l~~~~~---------------~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~ 433 (679)
..++.+++..++. +.||+|+||.||+|+.. +|+.||||+++.......+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 5577888776653 47999999999999965 7999999999876656667899999999999999
Q ss_pred CCccceEEeeCCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005749 434 NLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVL 513 (679)
Q Consensus 434 nIv~l~~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NIL 513 (679)
|||++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 103 niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIl 173 (321)
T 2c30_A 103 NVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSIL 173 (321)
T ss_dssp TBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEE
T ss_pred CcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEE
Confidence 99999999987 6789999999999999999864 34899999999999999999999988 999999999999
Q ss_pred ecCCCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccch
Q 005749 514 VDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDL 593 (679)
Q Consensus 514 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l 593 (679)
++.++.+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----- 247 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----- 247 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----
T ss_pred ECCCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----
Confidence 9999999999999998764332 2234567999999999999889999999999999999999999999543211
Q ss_pred hHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 594 PSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
....... ....... .......+.+.+++.+||+.||++|||++|+++.
T Consensus 248 -~~~~~~~-~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 -QAMKRLR-DSPPPKL----------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp -HHHHHHH-HSSCCCC----------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -HHHHHHh-cCCCCCc----------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111110 0000000 0011223457789999999999999999999875
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.2e-41 Score=355.17 Aligned_cols=278 Identities=26% Similarity=0.427 Sum_probs=217.8
Q ss_pred ccccHHHHHHhhc-----------CccccCCceEEEEEEeCCCCEEEEEEcccCc----ccCcccHHHHHHHHhccCCCC
Q 005749 370 EHLTLEDVLNATG-----------QVIEKTTYGTAYKAKLADGATIALRLLREGS----CKDRSSCLPVIRQLGKVRHEN 434 (679)
Q Consensus 370 ~~~~~~~l~~~~~-----------~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~n 434 (679)
..|+++++..++. +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4578888887763 6799999999999997 58899999987542 122457899999999999999
Q ss_pred CccceEEeeCCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005749 435 LIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV 514 (679)
Q Consensus 435 Iv~l~~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 514 (679)
|+++++++.+ .+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+++ |+||||||+||++
T Consensus 92 i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEec-CCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 9999999987 6789999999999999999975432 356899999999999999999999988 9999999999999
Q ss_pred cCCCceEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccch
Q 005749 515 DDFFVSRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDL 593 (679)
Q Consensus 515 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l 593 (679)
++++.+||+|||+++....... .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........ +
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~ 243 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--L 243 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--T
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--H
Confidence 9999999999999986543221 12234578999999998864 588999999999999999999999965443321 1
Q ss_pred hHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 594 PSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
..+....... ...+...+..............+.+++.+||+.||++|||++|+++.|+++..
T Consensus 244 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDE---EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTT---SCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhh---hhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222211111 11111111112223345566778899999999999999999999999999864
No 30
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.5e-43 Score=379.17 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=203.2
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+.. +++.||||.++.... ...+.|.+|+++|++++|||||++++++.. .+..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEEEEcCCCC
Confidence 478999999999999965 799999999976432 234678999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.++++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..........
T Consensus 198 ~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 198 DFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp BHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999764 235899999999999999999999988 99999999999999999999999999986543322111
Q ss_pred -hcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 540 -VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 540 -~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.... .... .+..+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~~~~-----------------~~~~~ 331 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---QTRE-----------------FVEKG 331 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---HHHH-----------------HHHTT
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH-----------------HHHcC
Confidence 12235678999999998889999999999999999998 99998543221 1111 01111
Q ss_pred CCCCh-HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 618 IRSPM-EEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 618 ~~~~~-~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.+.+. .....++.+++.+||+.||++|||++++++.|+++...
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11111 12234677899999999999999999999999988643
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-42 Score=360.69 Aligned_cols=244 Identities=18% Similarity=0.297 Sum_probs=200.6
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
+.||+|+||+||+|+ ..+++.||||++........+.+.+|+.++++++|||||++++++.. .+..++||||+++|+|
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSL 104 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTCBH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEECCCCCCH
Confidence 689999999999999 56799999999977665667789999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++... .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... .....
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 175 (297)
T 3fxz_A 105 TDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRST 175 (297)
T ss_dssp HHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCBCC
T ss_pred HHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-cccCC
Confidence 9999753 4899999999999999999999988 9999999999999999999999999998764432 22345
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSP 621 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 621 (679)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........... .. ...
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~-~~----------~~~ 238 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGT-PE----------LQN 238 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCS-CC----------CSC
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC-CC----------CCC
Confidence 67999999999999999999999999999999999999999543211 11110000000 00 011
Q ss_pred hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 622 MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 622 ~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+.....+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 12223557789999999999999999999874
No 32
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.6e-43 Score=367.63 Aligned_cols=265 Identities=21% Similarity=0.322 Sum_probs=201.5
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCC---CceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR---GEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~---~~~~lv~ey~~~ 458 (679)
.++||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.... ...++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 378999999999999975 7899999996542 22345677899999999999999999988632 247999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG----------HEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~----------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
|+|.++++. ..+++..++.|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 107 g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 107 GSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999975 2489999999999999999999987 6 999999999999999999999999999
Q ss_pred cccCcccc-cchhcccccccccccccccc-----cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh
Q 005749 529 QLMVPAVA-DEMVALAKADGYKAPELQRM-----KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL 602 (679)
Q Consensus 529 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~ 602 (679)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+............. ..
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~---~~ 255 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI---GQ 255 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH---CS
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh---cc
Confidence 87643322 12334578999999999886 35667899999999999999999999665433222111100 00
Q ss_pred cccccccchHhhhhcCCC------ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 603 EETTMEVFDMEIMKGIRS------PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 603 ~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.....+..+.......++ .......++.+++.+||+.||++|||++||++.|+++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000000000111111 112345668899999999999999999999999998753
No 33
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.6e-43 Score=383.82 Aligned_cols=253 Identities=21% Similarity=0.378 Sum_probs=206.9
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+++|++++|||||++++++.. +..++|||||++|+|
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~--~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEECCCTTCBH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--CccEEEEeecCCCcH
Confidence 47899999999999999889999999998643 346789999999999999999999999864 578999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++............
T Consensus 270 ~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 270 LDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99997542 234789999999999999999999988 9999999999999999999999999998764432222233
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..++..|+|||++....++.++|||||||++|||++ |+.||.+.... +... .+..+.+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~~--------------~i~~~~~~ 404 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVIR--------------ALERGYRM 404 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHH--------------HHHHTCCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHHH--------------HHHcCCCC
Confidence 456788999999998899999999999999999999 99999543221 1111 11111111
Q ss_pred C-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 621 P-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 621 ~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
+ ......++.+++.+||+.||++||||++|++.|+++.....
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 1 12233567789999999999999999999999999875443
No 34
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.4e-43 Score=368.17 Aligned_cols=253 Identities=21% Similarity=0.365 Sum_probs=201.8
Q ss_pred cCccccCCceEEEEEEeC----CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLA----DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|++++++++||||+++++++.+ .+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEEEeeCC
Confidence 378999999999999963 34469999997643 2345679999999999999999999999987 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.++++.. ...+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 133 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 133 ENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp TTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999754 345899999999999999999999988 99999999999999999999999999987643321
Q ss_pred c--chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 537 D--EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 537 ~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
. ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~-------------- 266 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISS-------------- 266 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHH--------------
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHH--------------
Confidence 1 1223346778999999998889999999999999999999 99999543221 11111
Q ss_pred hhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 614 IMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 614 i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
+..+.. +........+.+++.+||+.||++|||+.||++.|+++....
T Consensus 267 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111111 111223356778999999999999999999999999987543
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6e-43 Score=368.54 Aligned_cols=241 Identities=18% Similarity=0.287 Sum_probs=198.8
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++.+ .+..++||||+++|
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCTTC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEECCCCC
Confidence 7899999999999995 6899999999975432 234568899999999999999999999987 68899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 100 ~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~ 170 (328)
T 3fe3_A 100 EVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKL 170 (328)
T ss_dssp BHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGG
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC--Ccc
Confidence 999999764 34899999999999999999999988 999999999999999999999999999866433 234
Q ss_pred hcccccccccccccccccCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 540 VALAKADGYKAPELQRMKKCS-SRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
...+||+.|+|||++.+..+. .++||||+||++|||++|+.||.+... ..... .+..+.
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~--------------~i~~~~ 230 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KELRE--------------RVLRGK 230 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH--------------HHHHCC
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHHHH--------------HHHhCC
Confidence 566899999999999887765 799999999999999999999954321 11111 111111
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........+++.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111223567789999999999999999999875
No 36
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4e-42 Score=363.46 Aligned_cols=243 Identities=19% Similarity=0.270 Sum_probs=199.1
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccC---cccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREG---SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||+||+|+. .+|+.||+|+++.. .....+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEEEeCCC
Confidence 37899999999999995 46999999999754 23345678899999999999999999999998 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 89 gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GA 160 (337)
T ss_dssp TCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TC
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC-CC
Confidence 99999999763 45899999999999999999999988 999999999999999999999999999864322 22
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ...... ..+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i--------------~~~ 220 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELI--------------LME 220 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHH--------------HHC
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHH--------------HcC
Confidence 334567999999999999999999999999999999999999999543211 111111 111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 653 (679)
.........+++.+++.+||+.||++|| +++|++++
T Consensus 221 ~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1111112235677899999999999999 89999775
No 37
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-42 Score=366.83 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=195.6
Q ss_pred cCccccCCceEEEEEEe-CCCCE----EEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGAT----IALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
.+.||+|+||+||+|+. .+++. ||+|.++... ....+.+.+|++++++++|||||+++++|.+ +..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEEe
Confidence 37899999999999994 44543 5888886543 3445679999999999999999999999986 458899999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++|+|.+++... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 98 MPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp CTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred cCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999864 345899999999999999999999988 9999999999999999999999999998764332
Q ss_pred c-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 536 A-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 536 ~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
. .......+|..|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+...+
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~---------------- 232 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSIL---------------- 232 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHH----------------
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH---HHHHHH----------------
Confidence 2 12234456889999999999999999999999999999999 99999543322 111111
Q ss_pred hhhcC-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 614 IMKGI-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 614 i~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
..+. ....+.....+.+++.+||+.||++||++.|+++.|+++...
T Consensus 233 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 233 -EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -HTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -HcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1111 111222345677899999999999999999999999987643
No 38
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8e-43 Score=374.40 Aligned_cols=251 Identities=21% Similarity=0.404 Sum_probs=191.9
Q ss_pred cCccccCCceEEEEEEeC----CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLA----DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+.. ++..||||+++... ....+.|.+|++++++++|||||++++++.+ .+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEEEEeCC
Confidence 478999999999999854 57789999997653 2345679999999999999999999999987 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.++++.. ...+++.+++.|+.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 129 ENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp TTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999764 345899999999999999999999988 99999999999999999999999999987643321
Q ss_pred cc--hhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 537 DE--MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 537 ~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
.. .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... +....
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~~~~~-------------- 262 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------DVIKA-------------- 262 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------HHHHH--------------
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH--------------
Confidence 11 122345678999999998899999999999999999998 99999543221 11111
Q ss_pred hhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 614 IMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 614 i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+..+.+ +........+.+++.+||+.||++||+++||++.|+++..
T Consensus 263 i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111111 1112233567789999999999999999999999998854
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.7e-42 Score=355.71 Aligned_cols=250 Identities=20% Similarity=0.351 Sum_probs=202.8
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++.+++||||+++++++.+ .+..++||||+++++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCL 106 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCCTTCBH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEeccCCCcH
Confidence 37899999999999999888899999998643 234679999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++............
T Consensus 107 ~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 107 LNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9999764 235899999999999999999999988 9999999999999999999999999998765443333344
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... +..+...
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~--------------~~~~~~~ 240 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEH--------------IAQGLRL 240 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHH--------------HHTTCCC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHH--------------HhcccCC
Confidence 567788999999998889999999999999999998 99998543211 11110 1111111
Q ss_pred -ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 621 -PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 621 -~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
........+.+++.+||+.||++|||++|+++.|+++..
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 111123567789999999999999999999999998754
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.2e-42 Score=354.90 Aligned_cols=258 Identities=17% Similarity=0.242 Sum_probs=200.5
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCccc---CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSCK---DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+ ..+++.||+|.+...... ..+.+.+|++++.+++||||+++++++.+ .+..++||||+++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~g 95 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEEEEECCCS
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEEEEeCCCC
Confidence 789999999999999 457999999998654322 23578899999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.........
T Consensus 96 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 96 PTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999764 35899999999999999999999988 9999999999999999999999999998765443333
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||.+.... ........... . .. ....
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~-~-~~----~~~~ 236 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDSV-P-NV----TTDV 236 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSCC-C-CH----HHHS
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhccC-C-Cc----chhc
Confidence 44567999999999999999999999999999999999999999543211 11111111000 0 00 0000
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHHhhCCCCCC
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRP-TMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 663 (679)
.. .....+.+++.+||+.||++|| +++++.+.|+++....+.
T Consensus 237 ~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 237 RK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp CT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred cc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 11 1234567899999999999998 999999999998765443
No 41
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.9e-42 Score=379.68 Aligned_cols=255 Identities=23% Similarity=0.373 Sum_probs=202.0
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+++|++++|||||++++++.+ +..++|||||++|+|
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTTCBH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhhcCCCH
Confidence 47899999999999999888899999998643 345689999999999999999999999875 578999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++............
T Consensus 266 ~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 266 LDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99997532 235899999999999999999999988 9999999999999999999999999998764432222334
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..++..|+|||.+....++.++|||||||++|||++ |+.||.+.... +... .+..+.+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~--------------~i~~~~~~ 400 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLD--------------QVERGYRM 400 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHH--------------HHHTTCCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------HHHH--------------HHHcCCCC
Confidence 456788999999998899999999999999999999 99998543221 1111 11122111
Q ss_pred C-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCCC
Q 005749 621 P-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRSA 664 (679)
Q Consensus 621 ~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 664 (679)
+ .+.....+.+++.+||+.||++|||++++++.|+++.....+.
T Consensus 401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 1 1223356778999999999999999999999999987654443
No 42
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.9e-42 Score=375.97 Aligned_cols=247 Identities=25% Similarity=0.380 Sum_probs=202.7
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+.. |+.||||+++... ..+.|.+|+++|++++|||||++++++....+..++|||||++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 378999999999999985 7899999997643 4678999999999999999999999988755579999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..... ...
T Consensus 275 ~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 345 (450)
T 1k9a_A 275 VDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDT 345 (450)
T ss_dssp HHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc----ccC
Confidence 99998652 334799999999999999999999988 999999999999999999999999999854321 123
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. .. .+..+.+.
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~-----------------~i~~~~~~ 405 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VP-----------------RVEKGYKM 405 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HH-----------------HHHTTCCC
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH-----------------HHHcCCCC
Confidence 357888999999999999999999999999999998 9999965433211 11 11122111
Q ss_pred C-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 621 P-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 621 ~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
. .....+++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1 122335677899999999999999999999999988643
No 43
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-41 Score=353.26 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=195.4
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhc--cCCCCCccceEEeeCC---CCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK--VRHENLIPLRAFYQGK---RGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~---~~~~~lv~ey~ 456 (679)
.+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ....++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 37899999999999998 6899999998653 34456677777666 7999999999987542 34589999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH--------TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
++|+|.++++. ..+++..+++|+.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 89 EMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999964 35899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCccccc---chhccccccccccccccccc------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCc
Q 005749 529 QLMVPAVAD---EMVALAKADGYKAPELQRMK------KCSSRTDVYAFGILLLEILIG----------KKPGKSGRNGE 589 (679)
Q Consensus 529 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gvvl~El~tg----------~~p~~~~~~~~ 589 (679)
+........ ......||+.|+|||++.+. .+++++|||||||++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 765433221 12334799999999998866 455799999999999999999 77875433221
Q ss_pred ccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhh
Q 005749 590 FVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEEN 657 (679)
Q Consensus 590 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 657 (679)
. .................. ... ........++.+++.+||+.||++|||+.||++.|+++
T Consensus 241 ~-~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFEDMRKVVCVDQQRPNI-PNR------WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHHHHHHHTTSCCCCCC-CGG------GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhhhhHHHhccCCCCCC-Chh------hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 111111111111100000 000 01123557788999999999999999999999999986
No 44
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.4e-42 Score=357.26 Aligned_cols=264 Identities=19% Similarity=0.297 Sum_probs=201.1
Q ss_pred cCccccCCceEEEEEEe-----CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-----ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~ey 455 (679)
.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ....++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 37899999999999984 36889999999876555567899999999999999999999998642 3458999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 95 LPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999999764 235899999999999999999999988 9999999999999999999999999998764332
Q ss_pred c--cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccc----c
Q 005749 536 A--DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTME----V 609 (679)
Q Consensus 536 ~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~----~ 609 (679)
. .......++..|+|||.+.+..++.++||||||+++|||++|..|+..... .+.... ....... .
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~ 240 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-------EFMRMI-GNDKQGQMIVFH 240 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH-------HHHHHH-CTTCCTHHHHHH
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH-------HHHhhh-cCccccchhHHH
Confidence 1 112234577789999999988999999999999999999999999743210 000000 0000000 0
Q ss_pred chHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 610 FDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 610 ~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
....+..+.+ +.......++.+++.+||+.||++|||++|+++.|+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 0011111111 1122334667889999999999999999999999998854
No 45
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.4e-41 Score=362.61 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=197.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCccc------CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK------DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+|+.||+|.++..... ..+.+.+|++++.+++|||||++++++.+ .+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCEEEEEEE
Confidence 47899999999999995 46999999999765322 23568999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----ceEEeecccccc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF----VSRLTEFGLDQL 530 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~~ 530 (679)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++ .+||+|||+++.
T Consensus 96 ~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 96 LVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999975 345999999999999999999999988 99999999999998876 799999999987
Q ss_pred cCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVF 610 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (679)
.... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+.... ........ . ...+
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~-~--~~~~ 237 (361)
T 2yab_A 169 IEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITA-V--SYDF 237 (361)
T ss_dssp CCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHT-T--CCCC
T ss_pred cCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-c--CCCC
Confidence 6432 2234567999999999999889999999999999999999999999543211 11110000 0 0001
Q ss_pred hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 611 DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
+.... ......+.+++.+||..||++|||+.|+++
T Consensus 238 ~~~~~-------~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 238 DEEFF-------SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CHHHH-------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cchhc-------cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11110 112346778999999999999999999985
No 46
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.8e-42 Score=382.03 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=206.6
Q ss_pred cCccccCCceEEEEEEeCC-CCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLAD-GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+... +..||||+++... ...+.|.+|+++|++++|||||+++++|.. .+..++|||||++|+
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGN 302 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCTTCB
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEEccCCCC
Confidence 4789999999999999654 8899999997643 346789999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.++++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...........
T Consensus 303 L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 303 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999997643 345899999999999999999999988 999999999999999999999999999876543333333
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 541 ALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
...++..|+|||++....++.++|||||||++|||++ |+.||.+.... .+... +..+.+
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~-----------------~~~~~~ 437 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL-----------------LEKDYR 437 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH-----------------HHTTCC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH-----------------HHcCCC
Confidence 4456788999999998889999999999999999999 99998554321 11111 111111
Q ss_pred CC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 SP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 ~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.. ......++.+++.+||+.||++||||.||++.|+.+..
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 11 11223567789999999999999999999999998754
No 47
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.3e-42 Score=367.60 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=203.3
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +|||||++++++.+.....++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 47899999999999973 3467999999976432 2345789999999999 79999999999987556699999
Q ss_pred EecCCCChHHHhhcccCC--------------------------------------------------------------
Q 005749 454 DYFPSRTLHDLLHDTIAG-------------------------------------------------------------- 471 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~-------------------------------------------------------------- 471 (679)
||+++|+|.++++.....
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 999999999999864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc-ccchhcccccccccc
Q 005749 472 KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV-ADEMVALAKADGYKA 550 (679)
Q Consensus 472 ~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a 550 (679)
...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ........||+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999988 9999999999999999999999999998664322 222344568889999
Q ss_pred cccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-CChHHHHHH
Q 005749 551 PELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR-SPMEEGLVQ 628 (679)
Q Consensus 551 PE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~ 628 (679)
||++.+..++.++|||||||++|||++ |+.||.+....+. +.. .+..+.. .......++
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~ 324 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCR-----------------RLKEGTRMRAPDYTTPE 324 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHH-----------------HHHHTCCCCCCTTCCHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH--HHH-----------------HHHcCCCCCCCCCCCHH
Confidence 999998899999999999999999998 9999955433211 101 0111111 111122356
Q ss_pred HHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 629 ALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 629 ~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+.+++.+||+.||++|||++|++++|+++..
T Consensus 325 l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 325 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 7789999999999999999999999998753
No 48
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.1e-42 Score=361.33 Aligned_cols=250 Identities=20% Similarity=0.378 Sum_probs=198.4
Q ss_pred CccccCCceEEEEEEe-CCCCE----EEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGAT----IALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
+.||+|+||+||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++|||||++++++.+ +..++||||+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~ 96 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSLQLVTQYL 96 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSEEEEEECC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CccEEEEEeC
Confidence 7899999999999994 44554 7888875543 3445678899999999999999999999864 5799999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 97 PLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999764 245889999999999999999999998 99999999999999999999999999987644322
Q ss_pred c-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 537 D-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 537 ~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
. ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+.
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---------------- 231 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLE---------------- 231 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHH----------------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHH----------------
Confidence 2 2234567889999999998899999999999999999999 999996543321 111111
Q ss_pred hhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 615 MKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 615 ~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.+.. ........++.+++.+||+.||++||++.|+++.|+++...
T Consensus 232 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 232 -KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1000 11111223566799999999999999999999999998643
No 49
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-42 Score=363.12 Aligned_cols=257 Identities=20% Similarity=0.320 Sum_probs=203.4
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CCceEEEEe
Confidence 368999999999999963 358999999976532 235678999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005749 455 YFPSRTLHDLLHDTIAG--------------------KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV 514 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 514 (679)
|+++|+|.+++...... ...+++.+++.|+.||++||+|||+++ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999764211 256899999999999999999999988 9999999999999
Q ss_pred cCCCceEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccc
Q 005749 515 DDFFVSRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVD 592 (679)
Q Consensus 515 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~ 592 (679)
+.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.+....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---- 283 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE---- 283 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH----
Confidence 9999999999999986543221 22234567889999999998899999999999999999999 99999543211
Q ss_pred hhHHHHHHhhcccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 593 LPSIVKVAVLEETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
+.... +..+.. .........+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 284 --~~~~~--------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 284 --EVIYY--------------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp --HHHHH--------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred --HHHHH--------------HhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 11111 111111 1111223567789999999999999999999999999876543
No 50
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-41 Score=365.13 Aligned_cols=252 Identities=18% Similarity=0.224 Sum_probs=196.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||+||+|+. .+++.||+|+++... ....+.+.+|..++.++ +|||||++++++.+ .+..++||||+
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~lV~E~~ 135 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYV 135 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEEEEEEcC
Confidence 47899999999999995 468899999997642 23345688999999887 89999999999997 68899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 136 ~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~ 207 (396)
T 4dc2_A 136 NGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-G 207 (396)
T ss_dssp TTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-T
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccC-C
Confidence 999999999863 45899999999999999999999998 999999999999999999999999999863222 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... ...+.....+..
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-----------~~~~~~~~~i~~ 276 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----------NTEDYLFQVILE 276 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------------CCHHHHHHHHHH
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-----------hhHHHHHHHHhc
Confidence 234466899999999999999999999999999999999999999954322111000 000001111122
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTM------DEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~------~evl~~ 653 (679)
...........++.+++.+||+.||++||++ +|++++
T Consensus 277 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 277 KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred cccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1111122234567789999999999999996 566553
No 51
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.9e-42 Score=348.11 Aligned_cols=250 Identities=20% Similarity=0.368 Sum_probs=205.1
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+ .+..++||||+++++|
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 90 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCL 90 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECCCTTCBH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeCCCCCcH
Confidence 378999999999999988899999999976432 34679999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++............
T Consensus 91 ~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 91 SDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9999764 345899999999999999999999988 9999999999999999999999999998764433223334
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~--------------i~~~~~~ 224 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVED--------------ISTGFRL 224 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHH--------------HHTTCCC
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHHHH--------------HhcCCcC
Confidence 567788999999998889999999999999999999 89998543211 11111 1111111
Q ss_pred -ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 621 -PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 621 -~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
........+.+++.+||+.||++||+++|+++.|+++..
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111123567789999999999999999999999998864
No 52
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=367.09 Aligned_cols=242 Identities=19% Similarity=0.257 Sum_probs=193.7
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccC---cccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREG---SCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|.+++..+ +|||||++++++.+ .+..++||||+
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~lv~E~~ 106 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEEEEEEeCC
Confidence 37899999999999995 56899999999754 223456688999999988 69999999999998 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 107 ~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~ 178 (353)
T 3txo_A 107 NGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-G 178 (353)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccC-C
Confidence 999999999764 45899999999999999999999988 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... +... .+..
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~--------------~i~~ 238 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFE--------------AILN 238 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH--------------HHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHH--------------HHHc
Confidence 2344568999999999999888999999999999999999999999543221 1111 1111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCH------HHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTM------DEVVK 652 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~------~evl~ 652 (679)
+...........+.+++.+||+.||++||++ +|+++
T Consensus 239 ~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 239 DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111112233567789999999999999998 67765
No 53
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.7e-42 Score=351.70 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=190.6
Q ss_pred cCccccCCceEEEEEEeCC----CCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLAD----GATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc--CccEEEEecC
Confidence 4789999999999998643 45799999876432 335678999999999999999999999854 5789999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 98 TLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp TTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999764 345899999999999999999999988 99999999999999999999999999987654333
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......+++.|+|||.+.+..++.++||||||+++|||++ |..||.+.... .....+ .
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~~~i-----------------~ 231 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRI-----------------E 231 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHH-----------------H
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHHHHH-----------------H
Confidence 33334456788999999998899999999999999999996 99999543322 111111 1
Q ss_pred hcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 616 KGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 616 ~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+.. +..+...+.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 232 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 232 NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111 1112233567789999999999999999999999998753
No 54
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.8e-41 Score=353.45 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=195.6
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCccc--CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.||+|+||+||+|+..+|+.||+|+++..... ..+.+.+|++++++++|||||++++++.+ .+..++||||+++ +
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEEEECCSE-E
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEEEcCCCC-C
Confidence 789999999999999888999999999754322 23578899999999999999999999987 6789999999985 8
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 105 l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~ 177 (311)
T 3niz_A 105 LKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYT 177 (311)
T ss_dssp HHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSC-CC---
T ss_pred HHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCC-ccccc
Confidence 88888754 345899999999999999999999988 999999999999999999999999999876432 22234
Q ss_pred cccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc---cccchHh-hh
Q 005749 541 ALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT---MEVFDME-IM 615 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~-i~ 615 (679)
...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. +...... ...... ....+.. ..
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~-~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ--LPKIFSI-LGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH--HHHHHHH-HCCCCTTTSGGGTTSHHHH
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHH-HCCCChHHhhhhhccchhh
Confidence 4578999999999876 5689999999999999999999999966544322 1111111 110000 0000000 00
Q ss_pred hc----C-CCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KG----I-RSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~----~-~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.. . ..+. +...+++.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 0 0000 1123567899999999999999999999873
No 55
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3e-41 Score=356.21 Aligned_cols=254 Identities=15% Similarity=0.162 Sum_probs=203.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+ ..+|+.||||++.... ..+.+.+|+++++++ +||||+++++++.. .+..++||||+ ++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~~-~~ 89 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLELL-GP 89 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEECC-CC
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEeC-CC
Confidence 3789999999999999 4679999999987543 345799999999999 99999999999987 67899999999 89
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc-----eEEeecccccccCcc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV-----SRLTEFGLDQLMVPA 534 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~~~~ 534 (679)
+|.+++... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 90 ~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 90 SLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred CHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 999999864 346999999999999999999999988 999999999999998887 999999999876433
Q ss_pred ccc------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccc
Q 005749 535 VAD------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTME 608 (679)
Q Consensus 535 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 608 (679)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.......+......
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~----- 238 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA----- 238 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-----
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-----
Confidence 221 123567999999999999999999999999999999999999999665433221111111000000
Q ss_pred cchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 609 VFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 609 ~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
...... ....+++.+++.+||+.||.+||++++|.+.|+++.
T Consensus 239 -~~~~~~-------~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 239 -TPIEVL-------CENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp -SCHHHH-------TTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred -CCHHHH-------hccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 000000 011237888999999999999999999999998764
No 56
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=367.94 Aligned_cols=254 Identities=19% Similarity=0.285 Sum_probs=201.7
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||+||+|+.. +++.||||+++... ......+.+|+.++++++|||||++++++.+ .+..++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCCCEEEEE
Confidence 478999999999999953 46689999997542 2334578999999999999999999999987 678899999
Q ss_pred ecCCCChHHHhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---ceEEeecccc
Q 005749 455 YFPSRTLHDLLHDTIA---GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF---VSRLTEFGLD 528 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla 528 (679)
|+++|+|.+++..... ....+++..++.|+.||++||+|||+++ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999986532 1245899999999999999999999998 99999999999999554 5999999999
Q ss_pred cccCccc-ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 529 QLMVPAV-ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 529 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +....
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~------- 298 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEF------- 298 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHH-------
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-------
Confidence 8643221 112234567889999999998899999999999999999998 99998543211 11111
Q ss_pred cccchHhhhhcC-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 607 MEVFDMEIMKGI-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 607 ~~~~~~~i~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+..+. ..........+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 299 -------i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 -------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp -------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11111 11112223567789999999999999999999999988764
No 57
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.2e-41 Score=360.37 Aligned_cols=247 Identities=17% Similarity=0.184 Sum_probs=198.7
Q ss_pred hcCccccCCceEEEEEEe-CCCCEEEEEEcccCc-----ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 381 TGQVIEKTTYGTAYKAKL-ADGATIALRLLREGS-----CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+ .+..++|||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e 106 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLYMVFE 106 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEEe
Confidence 357899999999999994 579999999986431 1235678999999999999999999999987 688999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc---eEEeeccccccc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV---SRLTEFGLDQLM 531 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~ 531 (679)
||++|+|.+.+.........+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 107 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 99999999888765433456899999999999999999999988 999999999999987654 999999999876
Q ss_pred CcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 532 VPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 532 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. . .....
T Consensus 184 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~---~~~~~------------ 243 (351)
T 3c0i_A 184 GESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----E---RLFEG------------ 243 (351)
T ss_dssp CTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----H---HHHHH------------
T ss_pred cCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----H---HHHHH------------
Confidence 4332 22334579999999999998899999999999999999999999995421 0 11110
Q ss_pred HhhhhcCCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 612 MEIMKGIRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 612 ~~i~~~~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..+.....+ ....++.+++.+||+.||++|||+.|++++
T Consensus 244 --i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 244 --IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --HHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111111 123567789999999999999999999863
No 58
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.8e-42 Score=365.68 Aligned_cols=256 Identities=20% Similarity=0.347 Sum_probs=193.6
Q ss_pred cCccccCCceEEEEEEeC--C--CCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLA--D--GATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~--~--~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||+||+|+.. + +..||||.++... ....+.|.+|++++++++|||||++++++....+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 478999999999999853 2 2368999987543 2345679999999999999999999999876567889999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 174 ~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 174 KHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp TTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999764 345889999999999999999999988 99999999999999999999999999986643221
Q ss_pred c---chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 537 D---EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 537 ~---~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
. ......+++.|+|||.+.+..++.++|||||||++|||++ |.+||......+ ....+
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~--------------- 309 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL--------------- 309 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH---------------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH---------------
Confidence 1 1233457788999999998999999999999999999999 667774433221 11111
Q ss_pred hhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC
Q 005749 613 EIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 613 ~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 663 (679)
..+.+. ........+.+++.+||+.||++|||++|+++.|+++......
T Consensus 310 --~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 310 --LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp --HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred --HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 111111 1112234677899999999999999999999999998754433
No 59
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.2e-42 Score=372.31 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=199.2
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccC---cccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREG---SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.++||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+.++..++|||||+++++|.+ .+..++|||||+
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD-DNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-SSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCEEEEEEecCC
Confidence 378999999999999965 5889999999753 22345568999999999999999999999998 688999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 158 gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~ 231 (437)
T 4aw2_A 158 GGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231 (437)
T ss_dssp TCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence 99999999763 345899999999999999999999988 999999999999999999999999999876544333
Q ss_pred chhccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 538 EMVALAKADGYKAPELQR-----MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
.....+||+.|+|||++. ...++.++|||||||++|||++|+.||.+.... +....... .
T Consensus 232 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~---------~ 296 (437)
T 4aw2_A 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMN---------H 296 (437)
T ss_dssp ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT---------H
T ss_pred ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh------HHHHhhhh---------c
Confidence 344568999999999987 456899999999999999999999999643221 11111000 0
Q ss_pred hhhhcCCCChHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHH
Q 005749 613 EIMKGIRSPMEEGLVQALKLAMGCCAPVASV--RPTMDEVVKQ 653 (679)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~evl~~ 653 (679)
...-..........+++.+++.+|+..+|++ ||+++|++++
T Consensus 297 ~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 297 KERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000000111122356778999999888888 9999999875
No 60
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=353.79 Aligned_cols=247 Identities=19% Similarity=0.305 Sum_probs=198.3
Q ss_pred hcCccccCCceEEEEEEe-CCCCEEEEEEcccCccc------CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEE
Q 005749 381 TGQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK------DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
..+.||+|+||.||+|+. .+|+.||+|+++..... ..+.+.+|++++++++|||||++++++.+ .+..++||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 93 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDVILIL 93 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 357899999999999995 46999999999764321 24568999999999999999999999987 67899999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----ceEEeeccccc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF----VSRLTEFGLDQ 529 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 529 (679)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 94 ELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp ECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999975 345899999999999999999999988 99999999999999887 89999999998
Q ss_pred ccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ......... . . .
T Consensus 167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~-~-~-~ 235 (326)
T 2y0a_A 167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANVSAV-N-Y-E 235 (326)
T ss_dssp ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHT-C-C-C
T ss_pred ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHhc-C-C-C
Confidence 764322 233457999999999999889999999999999999999999999543211 111100000 0 0 0
Q ss_pred chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 ~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..... +.....+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~-------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYF-------SNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCcccc-------ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000100 1113456789999999999999999999874
No 61
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-41 Score=357.99 Aligned_cols=256 Identities=19% Similarity=0.294 Sum_probs=190.9
Q ss_pred cCccccCCceEEEEEEeCC-CC---EEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCce------
Q 005749 382 GQVIEKTTYGTAYKAKLAD-GA---TIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEK------ 449 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~-~~---~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~------ 449 (679)
.+.||+|+||.||+|+... +. .||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS-RAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc-ccccCCCcc
Confidence 4789999999999999543 32 89999997642 23456799999999999999999999999863 333
Q ss_pred EEEEEecCCCChHHHhhcccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccc
Q 005749 450 LLIYDYFPSRTLHDLLHDTIAG--KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527 (679)
Q Consensus 450 ~lv~ey~~~gsL~~~l~~~~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 527 (679)
++||||+++|+|.+++...... ...+++..++.|+.|++.||+|||+++ |+||||||+|||+++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 8999999999999999754321 225899999999999999999999988 99999999999999999999999999
Q ss_pred ccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhccc
Q 005749 528 DQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEET 605 (679)
Q Consensus 528 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~ 605 (679)
++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+....+ . .....
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~---~~~~~---- 253 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---I---YNYLI---- 253 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHHH----
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---H---HHHHh----
Confidence 987643322 12233456788999999998899999999999999999999 899985433211 1 11110
Q ss_pred ccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 606 TMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 606 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
........+....++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 254 ---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 254 ---------GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ---------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0111111223345678899999999999999999999999998643
No 62
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-41 Score=360.05 Aligned_cols=242 Identities=18% Similarity=0.272 Sum_probs=197.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++.++|||||++++++.+ .+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEECC-
Confidence 37899999999999994 679999999986532 2334578999999999999999999999998 67899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 92 ~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--~ 162 (336)
T 3h4j_B 92 GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--N 162 (336)
T ss_dssp CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--B
T ss_pred CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC--c
Confidence 67999988764 35899999999999999999999988 999999999999999999999999999876433 2
Q ss_pred chhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 538 EMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.....+||+.|+|||++.+..+ ++++|||||||++|||++|+.||.+....+... .+..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~--------------------~i~~ 222 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK--------------------KVNS 222 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC--------------------CCCS
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH--------------------HHHc
Confidence 2345679999999999987776 789999999999999999999996543322111 0011
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
+.........+.+.+++.+||+.||++|||++|+++.-
T Consensus 223 ~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 11111112235677899999999999999999998763
No 63
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-41 Score=357.02 Aligned_cols=247 Identities=19% Similarity=0.258 Sum_probs=196.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+.+++.++|||||++++++.+ .+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEEcCCCC
Confidence 37899999999999995 4799999999865432 335679999999999999999999999997 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-cc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA-DE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~-~~ 538 (679)
+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.+..... ..
T Consensus 91 ~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 91 ELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp EGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 99999975 345899999999999999999999988 99999999999999999999999999986543221 22
Q ss_pred hhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 539 MVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
.....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .....+.. . ..
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~----~------------~~ 226 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE----K------------KT 226 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHHHT----T------------CT
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHhc----c------------cc
Confidence 345679999999999987665 779999999999999999999995543221 11111100 0 00
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...+.......+.+++.+||+.||++|||++|+++.
T Consensus 227 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 001112233566789999999999999999999876
No 64
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=365.61 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=203.9
Q ss_pred cCccccCCceEEEEEEeC--------CCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEE
Q 005749 382 GQVIEKTTYGTAYKAKLA--------DGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLL 451 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~l 451 (679)
.+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +|||||++++++.. .+..++
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~~~~~l 152 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYV 152 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-CCceEE
Confidence 478999999999999842 235799999976532 3346789999999999 99999999999987 678999
Q ss_pred EEEecCCCChHHHhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc
Q 005749 452 IYDYFPSRTLHDLLHDTIA------------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519 (679)
Q Consensus 452 v~ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 519 (679)
||||+++|+|.+++..... ....+++..++.|+.|++.||+|||+++ |+||||||+|||+++++.
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 229 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNV 229 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCc
Confidence 9999999999999986531 1245899999999999999999999988 999999999999999999
Q ss_pred eEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHH
Q 005749 520 SRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~ 597 (679)
+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+... .+..
T Consensus 230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------~~~~ 303 (382)
T 3tt0_A 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EELF 303 (382)
T ss_dssp EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHH
T ss_pred EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHH
Confidence 99999999987643321 22334567889999999999999999999999999999999 9999854321 1111
Q ss_pred HHHhhcccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 598 KVAVLEETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
... ..+.. ........++.+++.+||+.||++|||++||++.|+++..
T Consensus 304 ~~~--------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 304 KLL--------------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HHH--------------HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--------------HcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 11111 1111223567789999999999999999999999998863
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=356.40 Aligned_cols=243 Identities=20% Similarity=0.303 Sum_probs=198.7
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|+++++.++|||||++++++.+ .+..++||||+++|+
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~g~~ 87 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFISGLD 87 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCCCCCB
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEeCCCCC
Confidence 37899999999999995 468899999987532 334568899999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCceEEeecccccccCcccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD--FFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++. ++.+||+|||+++...... .
T Consensus 88 L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--~ 159 (321)
T 1tki_A 88 IFERINTS---AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--N 159 (321)
T ss_dssp HHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--E
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--c
Confidence 99999753 345899999999999999999999988 999999999999987 7899999999998764332 2
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ..... +..+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~--------------i~~~~ 219 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIEN--------------IMNAE 219 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH--------------HHHTC
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHH--------------HHcCC
Confidence 23457899999999999888999999999999999999999999543221 11111 11111
Q ss_pred CCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 619 RSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 619 ~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
..... ....++.+++.+||..||++|||+.|+++.-
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 11111 1235677899999999999999999999853
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=350.07 Aligned_cols=270 Identities=16% Similarity=0.213 Sum_probs=206.1
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~ey~~~ 458 (679)
.++||+|+||+||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++... ....++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 378999999999999954 59999999997643 23456788999999999999999999998863 2377999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCceEEeecccccccCcc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV----DDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~~~~ 534 (679)
|+|.+++..... ...+++..++.|+.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 94 GSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999987533 234899999999999999999999988 9999999999999 88889999999999876433
Q ss_pred cccchhccccccccccccccc--------ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhc---
Q 005749 535 VADEMVALAKADGYKAPELQR--------MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLE--- 603 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~--- 603 (679)
. ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ ...........
T Consensus 170 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 170 E--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (319)
T ss_dssp C--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCT
T ss_pred C--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCc
Confidence 2 223457899999999876 46789999999999999999999999954332211 11111111111
Q ss_pred cccccc-------c--hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 604 ETTMEV-------F--DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 604 ~~~~~~-------~--~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
...... + ...+.. ...........+.+++.+||+.||++|||++|+++...+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPV-SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCT-TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCc-ccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 000000 0 000000 0012244556677899999999999999999999999876543
No 67
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-41 Score=356.07 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=204.1
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CCceEEEEe
Confidence 47899999999999984 245799999997643 2334678999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005749 455 YFPSRTLHDLLHDTIA--------------------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV 514 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 514 (679)
|+++|+|.+++..... ....+++..++.++.|+++||+|||+++ |+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEE
Confidence 9999999999986432 1234899999999999999999999988 9999999999999
Q ss_pred cCCCceEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccc
Q 005749 515 DDFFVSRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVD 592 (679)
Q Consensus 515 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~ 592 (679)
++++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+.... .
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~ 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE---R 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---H
Confidence 9999999999999986643322 12234457788999999988889999999999999999999 99999543321 1
Q ss_pred hhHHHHHHhhcccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 593 LPSIVKVAVLEETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
+...+ ..+.. .........+.+++.+||+.||++||++.|+++.|+++..+
T Consensus 261 ~~~~~-----------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 LFNLL-----------------KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHH-----------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHh-----------------hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 11110 11112235677899999999999999999999999987643
No 68
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6e-41 Score=348.05 Aligned_cols=257 Identities=15% Similarity=0.142 Sum_probs=204.3
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+ ..+++.||||++... ...+.+.+|++++.++ +|+||+++++++.. ....++||||+ ++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e~~-~~ 90 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDLL-GP 90 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEECC-CC
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEEec-CC
Confidence 3789999999999999 467999999998653 2456789999999999 79999999999887 67899999999 99
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc-----eEEeecccccccCcc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV-----SRLTEFGLDQLMVPA 534 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~~~~ 534 (679)
+|.+++... ...+++..++.|+.|++.||+|||+++ |+||||||+||+++.++. +||+|||+++.....
T Consensus 91 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 91 SLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred CHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 999999864 345899999999999999999999988 999999999999987776 999999999876433
Q ss_pred ccc------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccc
Q 005749 535 VAD------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTME 608 (679)
Q Consensus 535 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 608 (679)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.+............+......
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 239 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS----- 239 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-----
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-----
Confidence 221 223557899999999999989999999999999999999999999654432221111111100000
Q ss_pred cchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 609 VFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 609 ~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
...+.+. +....++.+++.+||+.||++||++++|++.|+++...
T Consensus 240 ~~~~~~~-------~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 240 TPLRELC-------AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp SCHHHHT-------TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccHHHHH-------hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000000 01235677899999999999999999999999998654
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=365.41 Aligned_cols=246 Identities=19% Similarity=0.279 Sum_probs=194.5
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
++||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++|||||++++++.+ .+..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCCCcH
Confidence 6799999999999994 5799999999987655556789999999999999999999999997 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCceEEeecccccccCcccccch
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV--DDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+ ++++.+||+|||+++...... ..
T Consensus 174 ~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 174 FDRIIDE---SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp HHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 9988753 245899999999999999999999988 9999999999999 567899999999998764332 22
Q ss_pred hcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 540 VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ........... .. ..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~i~~~~~--~~-~~------- 309 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA------ETLNNILACRW--DL-ED------- 309 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCC--CS-CS-------
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccC--CC-Ch-------
Confidence 3456999999999999889999999999999999999999999543211 11111111000 00 00
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.......+++.+++.+||+.||++|||++|+++.
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011223567889999999999999999999984
No 70
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=351.51 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=192.5
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||+++|+|
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~lv~e~~~~~~L 86 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN---PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT---TTEEEEECCTTCBH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---CcEEEEEcCCCCCH
Confidence 378999999999999975 789999998643 235678999999999999999999998764 48999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc-eEEeecccccccCcccccchh
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV-SRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~~~~~~~~~ 540 (679)
.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++..... ..
T Consensus 87 ~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~ 161 (307)
T 2eva_A 87 YNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MT 161 (307)
T ss_dssp HHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----cc
Confidence 999986432 234789999999999999999999943234999999999999998886 799999999765322 23
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-
Q 005749 541 ALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR- 619 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~- 619 (679)
...||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....... ..+..
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~--------------~~~~~~ 223 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAV--------------HNGTRP 223 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHH--------------HTTCCC
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHH--------------hcCCCC
Confidence 3468999999999998899999999999999999999999995432211 0111100 00100
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.........+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1111223457789999999999999999999999998764
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-41 Score=352.17 Aligned_cols=255 Identities=20% Similarity=0.334 Sum_probs=196.6
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+.. ..+|+|+++.... ...+.+.+|++++++++||||+++++++.. +..++||||++++
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--CcEEEEEecCCCC
Confidence 378999999999999864 4699999876432 234678999999999999999999998764 5689999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc-cccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA-VADE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~-~~~~ 538 (679)
+|.+++... ...+++.+++.|+.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..... ....
T Consensus 117 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 117 SLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp BHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred cHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 999999754 356899999999999999999999988 999999999999999999999999999865321 1222
Q ss_pred hhccccccccccccccc---ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 539 MVALAKADGYKAPELQR---MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .....+..... . +.+
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~----~----~~~- 259 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVGRGYA----S----PDL- 259 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHHHTCC----C----CCS-
T ss_pred ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHHHHhcCCC----C----cch-
Confidence 34557999999999886 5678999999999999999999999995433211 11111110000 0 000
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
. .......+.+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 260 ~---~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 S---KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T---TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred h---hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 0 00112235677899999999999999999999999988654
No 72
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-41 Score=354.87 Aligned_cols=240 Identities=20% Similarity=0.249 Sum_probs=197.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+.+++.++|||||++++++.+ .+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEEEeCCC
Confidence 37899999999999995 579999999997542 2345678899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 90 GGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp SCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 99999999863 45899999999999999999999988 999999999999999999999999999865332
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ...... +..+
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~--------------i~~~ 218 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEK--------------ILNA 218 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHH--------------HHHC
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHH--------------HHhC
Confidence 2356799999999999999999999999999999999999999954321 111111 1111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 653 (679)
.....+....++.+++.+|++.||++|| +++|++++
T Consensus 219 ~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1111112235677899999999999999 88998854
No 73
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.5e-41 Score=347.79 Aligned_cols=247 Identities=23% Similarity=0.359 Sum_probs=189.3
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc----cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC----KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~----~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+ .+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEEEEcCC
Confidence 378999999999999974 88999999876432 224578899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--------CCceEEeeccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD--------FFVSRLTEFGLDQ 529 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~--------~~~~kl~DFGla~ 529 (679)
+++|.+++.. ..+++..++.++.|++.||+|||+++..+|+||||||+||+++. ++.+||+|||+++
T Consensus 90 ~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 90 GGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp TEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 9999999863 45899999999999999999999988667999999999999986 6789999999998
Q ss_pred ccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
...... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.+.... ........
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~------- 228 (271)
T 3dtc_A 165 EWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAM------- 228 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHT-------
T ss_pred cccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhc-------
Confidence 654322 22457899999999999888999999999999999999999999543211 00000000
Q ss_pred chHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhh
Q 005749 610 FDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEEN 657 (679)
Q Consensus 610 ~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 657 (679)
.... .........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 ------NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0000 11112235677899999999999999999999999864
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.1e-41 Score=355.52 Aligned_cols=246 Identities=16% Similarity=0.257 Sum_probs=193.5
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCC------------
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRG------------ 447 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~------------ 447 (679)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||+++++|.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 478999999999999964 799999999975432 345679999999999999999999998865221
Q ss_pred --------------------------------------------ceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHH
Q 005749 448 --------------------------------------------EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKI 483 (679)
Q Consensus 448 --------------------------------------------~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i 483 (679)
..++||||+++|+|.+++..... ....++..++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~i 169 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREHGVCLHI 169 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCHHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhhHHHHHH
Confidence 37999999999999999986543 344678889999
Q ss_pred HHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-----------cchhcccccccccccc
Q 005749 484 ALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA-----------DEMVALAKADGYKAPE 552 (679)
Q Consensus 484 ~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~~y~aPE 552 (679)
+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....... .......||+.|+|||
T Consensus 170 ~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 170 FIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 999999999999988 99999999999999999999999999987654321 1123456999999999
Q ss_pred cccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC-ChHHHHHHHHH
Q 005749 553 LQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS-PMEEGLVQALK 631 (679)
Q Consensus 553 ~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~ 631 (679)
++.+..++.++|||||||++|||++|..|+. ....... .+.....+ ......+++.+
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVRIIT--------------DVRNLKFPLLFTQKYPQEHM 304 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHHHHH--------------HHHTTCCCHHHHHHCHHHHH
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHHHHH--------------HhhccCCCcccccCChhHHH
Confidence 9999899999999999999999999877641 1000000 01111111 12334466788
Q ss_pred HHHhccCcCCCCCCCHHHHHHH
Q 005749 632 LAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 632 l~~~cl~~dP~~RPs~~evl~~ 653 (679)
++.+||+.||++|||++|+++.
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCCCcCCCHHHHhhc
Confidence 9999999999999999999863
No 75
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=381.84 Aligned_cols=254 Identities=23% Similarity=0.375 Sum_probs=207.2
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+++|++++|||||++++++.+ +..++|||||++|+|
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTTEEH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhcCCcH
Confidence 47899999999999999888899999998643 345689999999999999999999999875 578999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.++++... ...+++.+++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++............
T Consensus 349 ~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 349 LDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99997532 235899999999999999999999988 9999999999999999999999999998765432222233
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
..++..|+|||++....++.++|||||||++|||++ |+.||.+.... +... .+..+.+.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~~~~--------------~i~~~~~~ 483 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLD--------------QVERGYRM 483 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------HHHH--------------HHHTTCCC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH--------------HHHcCCCC
Confidence 456788999999998899999999999999999999 89998543221 1111 11112111
Q ss_pred C-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC
Q 005749 621 P-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 621 ~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 663 (679)
+ .......+.+++.+||+.||++|||+++|++.|+++......
T Consensus 484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 1 122235677899999999999999999999999998765444
No 76
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=357.56 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=201.7
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCc-ccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGS-CKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv~ 128 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SGPIYLIF 128 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-CCccEEEE
Confidence 47899999999999995 245689999997643 34466899999999999 89999999999987 67899999
Q ss_pred EecCCCChHHHhhcccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005749 454 DYFPSRTLHDLLHDTIAG-------------------KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV 514 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl 514 (679)
||+++|+|.+++...... ...+++..++.++.|++.||+|||+++ |+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEE
Confidence 999999999999764321 134899999999999999999999988 9999999999999
Q ss_pred cCCCceEEeecccccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccc
Q 005749 515 DDFFVSRLTEFGLDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVD 592 (679)
Q Consensus 515 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~ 592 (679)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.+..... .
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--N 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH--H
Confidence 99999999999999876433221 2234457888999999988899999999999999999998 999995543221 1
Q ss_pred hhHHHHHHhhcccccccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCCCC
Q 005749 593 LPSIVKVAVLEETTMEVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRSAL 665 (679)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 665 (679)
....+ ..+... .......++.+++.+||+.||++|||+.|+++.|+.+....+.+.
T Consensus 284 ~~~~~-----------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 340 (344)
T 1rjb_A 284 FYKLI-----------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM 340 (344)
T ss_dssp HHHHH-----------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred HHHHH-----------------hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111 111223567789999999999999999999999999887655443
No 77
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.4e-41 Score=345.25 Aligned_cols=247 Identities=23% Similarity=0.402 Sum_probs=196.1
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccC-------cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKD-------RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~-------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
+.||+|+||+||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.+. .++|||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~lv~e 101 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP---PRMVME 101 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---TEEEEE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---CeEEEE
Confidence 7899999999999995 579999999986543222 25789999999999999999999998762 379999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc-----eEEeeccccc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV-----SRLTEFGLDQ 529 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~ 529 (679)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++ ++|+||||||+||+++.++. +||+|||+++
T Consensus 102 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 102 FVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp CCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred ecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999988754 346999999999999999999999875 45999999999999988776 9999999998
Q ss_pred ccCcccccchhccccccccccccccc--ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQR--MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTM 607 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (679)
.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||......+. ........
T Consensus 178 ~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~----- 244 (287)
T 4f0f_A 178 QSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----KFINMIRE----- 244 (287)
T ss_dssp CCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH----HHHHHHHH-----
T ss_pred cccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH----HHHHHHhc-----
Confidence 5432 223457899999999984 45578999999999999999999999955433211 11111100
Q ss_pred ccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhh
Q 005749 608 EVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEEN 657 (679)
Q Consensus 608 ~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 657 (679)
.+... ......+.+.+++.+||+.||++|||++|+++.|+++
T Consensus 245 --------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 --------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 01111 1112235677899999999999999999999999864
No 78
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-41 Score=367.47 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=198.3
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccC---cccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREG---SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
++||+|+||+||+|+. .+++.||+|+++.. .....+.+.+|+++++.++|||||+++++|.+ .+..++|||||++
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lV~E~~~g 153 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-DRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCTT
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCC
Confidence 7899999999999995 46899999998653 22345678999999999999999999999997 6889999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.++++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.........
T Consensus 154 g~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 154 GDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 9999999752 4899999999999999999999988 9999999999999999999999999998765443333
Q ss_pred hhcccccccccccccccccC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 539 MVALAKADGYKAPELQRMKK----CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~----~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.... ........ ...
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~---------~~~ 290 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMN---------HKN 290 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT---------HHH
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHh---------ccc
Confidence 45678999999999987655 789999999999999999999999543211 11111100 000
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASV--RPTMDEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPs~~evl~~ 653 (679)
.-..+.......++.+++.+||..+|++ ||+++||+++
T Consensus 291 -~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 -SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0000111122356778999999999988 9999999976
No 79
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-41 Score=348.34 Aligned_cols=255 Identities=20% Similarity=0.308 Sum_probs=201.7
Q ss_pred cCccccCCceEEEEEEe-CCCC---EEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGA---TIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~---~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
+++||+|+||+||+|+. .++. .||+|.+..... ...+.+.+|++++++++||||+++++++.+..+..++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 47899999999999984 3333 799999876432 335678999999999999999999999987555569999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
.+|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.......
T Consensus 106 ~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 106 CHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred cCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999763 345899999999999999999999988 99999999999999999999999999986643321
Q ss_pred ---cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 537 ---DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 537 ---~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
.......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..+....
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~---------------- 241 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFL---------------- 241 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHH----------------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHh----------------
Confidence 1223456788999999999989999999999999999999966665332221 1111111
Q ss_pred hhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 614 IMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 614 i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..+.. .........+.+++.+||+.||++|||++|+++.|+++....
T Consensus 242 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 242 -AQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp -HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -hcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 11111 111122346778999999999999999999999999986543
No 80
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4e-41 Score=346.66 Aligned_cols=250 Identities=19% Similarity=0.299 Sum_probs=198.0
Q ss_pred cCccccCCceEEEEEEeCC----CCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLAD----GATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+..+ +..||+|.++... ....+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCEEEEecC
Confidence 3789999999999998532 3369999997653 2345678999999999999999999999875 4679999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 95 PYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp TTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred CCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999764 345899999999999999999999988 99999999999999999999999999987654333
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+ .
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~-----------------~ 228 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVL-----------------E 228 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHH-----------------H
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHH-----------------h
Confidence 33344567888999999988889999999999999999998 999995433221 11111 1
Q ss_pred hcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 616 KGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 616 ~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+.. +......+.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 229 KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1100 1111223557789999999999999999999999998753
No 81
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.3e-41 Score=348.13 Aligned_cols=254 Identities=20% Similarity=0.332 Sum_probs=199.3
Q ss_pred cCccccCCceEEEEEEeCC----CCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLAD----GATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||+||+|+..+ +..||+|.+..... ...+.+.+|++++++++||||+++++++....+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4789999999999998543 23689999876432 334678999999999999999999999776567889999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.......
T Consensus 110 ~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 110 KHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp TTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 999999999753 345899999999999999999999988 99999999999999999999999999987644322
Q ss_pred c---chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 537 D---EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIG-KKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 537 ~---~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
. ......+|+.|+|||.+.+..++.++||||+|+++|||++| .+||......+ ....
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~---------------- 244 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---------------- 244 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHH----------------
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH----------------
Confidence 1 22344677889999999988999999999999999999995 55553322211 1110
Q ss_pred hhhhcCCCC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 613 EIMKGIRSP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 613 ~i~~~~~~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
+..+.... .......+.+++.+||+.||++|||++|+++.|+++....
T Consensus 245 -~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 245 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -HhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 01111111 1112345778999999999999999999999999986543
No 82
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-41 Score=361.29 Aligned_cols=242 Identities=19% Similarity=0.265 Sum_probs=196.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||.||+|+. .+|+.||+|+++... ....+.+..|.+++..+ +||||+++++++.+ .+..++||||+
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~~lv~E~~ 100 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENLFFVMEYL 100 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEEEEEEeCC
Confidence 37899999999999995 468999999997542 23455678999999887 99999999999998 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 101 ~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~ 172 (345)
T 1xjd_A 101 NGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-D 172 (345)
T ss_dssp TTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-T
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccC-C
Confidence 999999999763 35899999999999999999999988 999999999999999999999999999864322 1
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ..... +..
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~--------------i~~ 232 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHS--------------IRM 232 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH--------------HHH
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHH--------------HHh
Confidence 2234568999999999999989999999999999999999999999543211 11111 111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHH-HHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMD-EVVK 652 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~-evl~ 652 (679)
+..........++.+++.+||+.||++||++. |+++
T Consensus 233 ~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 233 DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp CCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11111112235677899999999999999997 6653
No 83
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.7e-42 Score=359.41 Aligned_cols=267 Identities=20% Similarity=0.282 Sum_probs=204.7
Q ss_pred cCccccCCceEEEEEEe-----CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeC-CCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-----ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG-KRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~~~lv~ey 455 (679)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 37899999999999984 4688999999987655556679999999999999999999998874 24568999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++++|.+++.... ..+++..++.|+.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp CTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred cCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999997642 35899999999999999999999988 9999999999999999999999999998764332
Q ss_pred cc--chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc--cccch
Q 005749 536 AD--EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT--MEVFD 611 (679)
Q Consensus 536 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~ 611 (679)
.. ......+|..|+|||++.+..++.++||||||+++|||++|+.||..... ............ .....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA-------EFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-------HHHHHCC----CCHHHHHH
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc-------hhhhhcccccccccHHHHH
Confidence 21 22344678889999999988899999999999999999999999843211 000000000000 00001
Q ss_pred HhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 612 MEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 612 ~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..+..+.. ...+...+.+.+++.+||+.||++|||++|+++.|+++....
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11111111 112233456778999999999999999999999999987543
No 84
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.7e-42 Score=352.55 Aligned_cols=247 Identities=19% Similarity=0.264 Sum_probs=197.2
Q ss_pred cCccccCCceEEEEEEeC-CC-------CEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA-DG-------ATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~-------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+ .+..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CCCCEEEE
Confidence 378999999999999843 33 4799999977665666789999999999999999999999987 67889999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc--------eEEeec
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV--------SRLTEF 525 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DF 525 (679)
||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++. +||+||
T Consensus 92 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp ECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred ECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999864 234899999999999999999999988 999999999999998877 999999
Q ss_pred ccccccCcccccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc
Q 005749 526 GLDQLMVPAVADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE 604 (679)
Q Consensus 526 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~ 604 (679)
|+++..... ....++..|+|||++.+ ..++.++||||||+++|||++|..|+...... ..........
T Consensus 166 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----~~~~~~~~~~- 234 (289)
T 4fvq_A 166 GISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-----QRKLQFYEDR- 234 (289)
T ss_dssp CSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTT-
T ss_pred cccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----HHHHHHhhcc-
Confidence 999765322 23457888999999887 67899999999999999999966554332211 0111100000
Q ss_pred cccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 605 TTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 605 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.........++.+++.+||+.||++|||++|+++.|+++..+
T Consensus 235 --------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 235 --------------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp --------------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 000011123566899999999999999999999999998653
No 85
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3e-41 Score=355.41 Aligned_cols=246 Identities=17% Similarity=0.256 Sum_probs=178.7
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
++.||+|+||.||+|+. .+++.||||++... ....+.+|++++.+++ |||||++++++.+ .+..++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCC
Confidence 47899999999999995 56899999998653 3456789999999997 9999999999997 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---ceEEeecccccccCcccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF---VSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~~~ 536 (679)
+|.+++... ..+++..++.|+.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 92 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~ 163 (325)
T 3kn6_A 92 ELFERIKKK----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-N 163 (325)
T ss_dssp BHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC-C
Confidence 999999863 45999999999999999999999988 99999999999998765 8999999999865433 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCccc-chhHHHHHHhhcccccccchHhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFV-DLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....... ...+... .+.
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--------------~i~ 229 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK--------------KIK 229 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH--------------HHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH--------------HHH
Confidence 2234557899999999999999999999999999999999999999654322111 1111111 111
Q ss_pred hcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+..... ....+++.+++.+||+.||++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1111111 1224567889999999999999999998754
No 86
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=383.54 Aligned_cols=248 Identities=20% Similarity=0.295 Sum_probs=198.8
Q ss_pred ccccCCceEEEEEEeC---CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 384 VIEKTTYGTAYKAKLA---DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.||+|+||.||+|++. ++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 6999999999999853 46689999998653 3356789999999999999999999999976 5699999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc-
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE- 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~- 538 (679)
+|.+++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.........
T Consensus 421 ~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 421 PLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp BHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred cHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999999754 345899999999999999999999988 9999999999999999999999999998764332211
Q ss_pred -hhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 539 -MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 539 -~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ +.. .+..
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~-----------------~i~~ 554 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA-----------------FIEQ 554 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHH-----------------HHHT
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH-----------------HHHc
Confidence 122345678999999998899999999999999999998 999996543221 111 1112
Q ss_pred cCCCC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 617 GIRSP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 617 ~~~~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+.+.. .+....++.+++.+||+.||++||++++|++.|+.+..
T Consensus 555 ~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 555 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 21111 12234677789999999999999999999999998753
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=359.68 Aligned_cols=244 Identities=16% Similarity=0.251 Sum_probs=197.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++|||||+++++|.+ .+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEEecCC
Confidence 37899999999999994 568999999986532 2345678899999999999999999999998 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++.. ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+... .
T Consensus 99 gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 169 (384)
T 4fr4_A 99 GGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--T 169 (384)
T ss_dssp TEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT--C
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC--C
Confidence 9999999986 345999999999999999999999988 999999999999999999999999999876432 2
Q ss_pred chhcccccccccccccccc---cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 538 EMVALAKADGYKAPELQRM---KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||.......... .....
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~---~~~~~-------------- 232 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE---IVHTF-------------- 232 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH---HHHHH--------------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH---HHHHH--------------
Confidence 3345689999999999874 458999999999999999999999996543322111 11111
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCC-HHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPT-MDEVVK 652 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~evl~ 652 (679)
..............+.+++.+||+.||++||+ ++++++
T Consensus 233 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 233 ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred hhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11111111223356778999999999999998 677664
No 88
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.4e-41 Score=354.46 Aligned_cols=243 Identities=20% Similarity=0.252 Sum_probs=188.3
Q ss_pred cCccccCCceEEEEEEe----CCCCEEEEEEcccCc----ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL----ADGATIALRLLREGS----CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++|||||++++++.. .+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CCEEEEEE
Confidence 37899999999999996 478999999997642 2334568899999999999999999999987 67899999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 101 EYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp ECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred eCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999763 35899999999999999999999988 99999999999999999999999999986432
Q ss_pred ccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 534 AVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~-------------- 232 (327)
T 3a62_A 174 D-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDK-------------- 232 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHH--------------
T ss_pred C-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHH--------------
Confidence 2 12233457999999999999889999999999999999999999999543211 11111
Q ss_pred hhhcCCCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 005749 614 IMKGIRSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQ 653 (679)
Q Consensus 614 i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 653 (679)
+........+....++.+++.+||+.||++|| +++|++++
T Consensus 233 i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 233 ILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11111111112235677899999999999999 77788764
No 89
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=368.68 Aligned_cols=247 Identities=18% Similarity=0.221 Sum_probs=197.2
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+ ..+|+.||+|++..... ...+.+.+|++++++++|||||++++++.+ .+..++|||||++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEEEEEeCCC
Confidence 4789999999999998 56799999999876432 234578999999999999999999999987 6889999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCceEEeecccccccCccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD---DFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~~~~~ 535 (679)
|+|.+.+... ..+++..+..++.||+.||+|||+++ |+||||||+|||++ +++.+||+|||+++.....
T Consensus 95 g~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~- 166 (444)
T 3soa_A 95 GELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE- 166 (444)
T ss_dssp CBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-
Confidence 9999999763 45899999999999999999999998 99999999999998 4578999999999876433
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ........... ...
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~--~~~----- 233 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAY--DFP----- 233 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCC--CCC-----
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCC--CCC-----
Confidence 22234567999999999999889999999999999999999999999543211 11111000000 000
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+..+...+++.+++.+||+.||++|||+.|+++.
T Consensus 234 ---~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 234 ---SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00111224567789999999999999999999874
No 90
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.3e-41 Score=352.10 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=201.6
Q ss_pred cCccccCCceEEEEEEe-----CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-----ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~e 454 (679)
.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... ....++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 37899999999999983 468899999997543 23456789999999999999999999999863 256899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 106 FLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp CCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred eCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999654 345899999999999999999999988 999999999999999999999999999876443
Q ss_pred cc--cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccccc
Q 005749 535 VA--DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEVF 610 (679)
Q Consensus 535 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ 610 (679)
.. .......+|..|+|||.+.+..++.++||||+|+++|||++|..|+.... ......... ........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM-------ALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH-------HHHHHHHCSCCGGGHHHHH
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh-------hHHhhccCCcccccCHHHH
Confidence 22 12234567888999999998889999999999999999999999863210 000000000 00000111
Q ss_pred hHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 611 DMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 611 ~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
...+..+... ..+...+.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111222111 12233456788999999999999999999999999864
No 91
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-41 Score=360.09 Aligned_cols=246 Identities=19% Similarity=0.255 Sum_probs=197.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++|||||++++++.+ .+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEecCCC
Confidence 57899999999999995 5689999999976432 234578899999999999999999999997 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CceEEeecccccccCccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF---FVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~ 535 (679)
|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 113 g~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~- 184 (362)
T 2bdw_A 113 GELFEDIVAR----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS- 184 (362)
T ss_dssp CBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC-
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC-
Confidence 9999998753 45899999999999999999999988 9999999999999865 45999999999876432
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ........... .. .
T Consensus 185 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------~~~~~i~~~~~--~~-~---- 250 (362)
T 2bdw_A 185 -EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAY--DY-P---- 250 (362)
T ss_dssp -CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCC--CC-C----
T ss_pred -cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCC--CC-C----
Confidence 2233567999999999999889999999999999999999999999543211 11111000000 00 0
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........+++.+++.+||+.||++||++.|+++.
T Consensus 251 ---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 251 ---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ---TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00011223567789999999999999999998864
No 92
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.4e-41 Score=358.31 Aligned_cols=239 Identities=18% Similarity=0.220 Sum_probs=197.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+ .+..++||||+++
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~g 125 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTT
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEEEcCCCC
Confidence 7899999999999995 479999999986542 2345678899999999999999999999997 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 126 g~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---- 194 (350)
T 1rdq_E 126 GEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194 (350)
T ss_dssp CBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC----
Confidence 9999999864 34899999999999999999999988 999999999999999999999999999876432
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ...... +..+.
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~--------------i~~~~ 254 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEK--------------IVSGK 254 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH--------------HHHCC
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHH--------------HHcCC
Confidence 2345799999999999988999999999999999999999999954321 111111 11111
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPT-----MDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~evl~~ 653 (679)
.........++.+++.+||+.||++||+ ++|++++
T Consensus 255 ~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1111223356778999999999999998 8888764
No 93
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.7e-41 Score=345.67 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=203.5
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+..++..||+|.++... ...+.+.+|++++++++||||+++++++.. +..++||||+++++|
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~~~~L 94 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYMENGSL 94 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECCTTCBH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC--CCcEEEEecCCCCCH
Confidence 37899999999999998888899999997643 345679999999999999999999999874 568999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++............
T Consensus 95 ~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 95 VDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 99997532 125899999999999999999999988 9999999999999999999999999998765443333334
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR- 619 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~- 619 (679)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.... +..... ..+..
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~--------------~~~~~~ 229 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNL--------------ERGYRM 229 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHH--------------HTTCCC
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHH--------------hcccCC
Confidence 456788999999988889999999999999999999 89998543211 111110 11111
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
........++.+++.+||+.||++|||++++++.|+++..
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 0111223567789999999999999999999999998753
No 94
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.1e-41 Score=371.06 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=189.1
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccC---cccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREG---SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+ ..+|+.||||+++.. .......+.+|++++++++||||+++++++.+ .+..++|||||+
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEEEEeeCC
Confidence 4789999999999999 457999999999753 23345678899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHT-GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
+|+|.+++... ..+++..++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 232 ~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-G 303 (446)
T ss_dssp SCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCC-C
Confidence 99999999763 458999999999999999999998 77 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ...... ..
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i--------------~~ 363 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELI--------------LM 363 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHH--------------HH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHH--------------Hh
Confidence 2344568999999999999999999999999999999999999999543211 111111 11
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 653 (679)
..........+++.+++.+||+.||++|| +++|++++
T Consensus 364 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 364 EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 11111112235677899999999999999 99999874
No 95
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.3e-41 Score=356.25 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=196.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCccc---CcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK---DRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+. .+++.||+|+++..... ..+.+.+|++++.++ +|||||++++++.+ .+..++||||+
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~lv~e~~ 92 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYV 92 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEEEEeCC
Confidence 37899999999999995 46889999999764322 234578999999988 89999999999987 68899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 93 ~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-~ 164 (345)
T 3a8x_A 93 NGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-G 164 (345)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-T
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC-C
Confidence 999999999763 35899999999999999999999988 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCccc--chhHHHHHHhhcccccccchHhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFV--DLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ...... ...+
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-------------~~~i 231 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------------FQVI 231 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH-------------HHHH
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH-------------HHHH
Confidence 2334568999999999999989999999999999999999999999543221100 000000 0111
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTM------DEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~------~evl~~ 653 (679)
.............++.+++.+||+.||++||++ +|++++
T Consensus 232 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 232 LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred HcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 111111112234567789999999999999996 566553
No 96
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.7e-41 Score=351.40 Aligned_cols=256 Identities=19% Similarity=0.331 Sum_probs=204.7
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~ 106 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGPTLVIT 106 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-CCCcEEEE
Confidence 47899999999999984 3567999999976532 3356789999999999 99999999999987 67899999
Q ss_pred EecCCCChHHHhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc
Q 005749 454 DYFPSRTLHDLLHDTIAG--------------KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 519 (679)
||+++|+|.+++...... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 183 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRI 183 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCC
Confidence 999999999999864321 225899999999999999999999988 999999999999999999
Q ss_pred eEEeecccccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHH
Q 005749 520 SRLTEFGLDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~ 597 (679)
+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.+..... ......
T Consensus 184 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~ 261 (313)
T 1t46_A 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--KFYKMI 261 (313)
T ss_dssp EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--HHHHHH
T ss_pred EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--HHHHHh
Confidence 999999999876443221 1223456788999999988899999999999999999999 999985543221 111111
Q ss_pred HHHhhcccccccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 598 KVAVLEETTMEVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
. .+... ........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 262 ~-----------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 K-----------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp H-----------------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c-----------------cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1 11001 1112235677899999999999999999999999987643
No 97
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=354.43 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=193.7
Q ss_pred CccccCCceEEEEEEe-CCCCE----EEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGAT----IALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
+.||+|+||.||+|+. .+++. ||+|.++... ....+.+.+|++++++++||||+++++++.. +..++|+||+
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~v~~~~ 98 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQLITQLM 98 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEEEEECCC
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCceEEEEec
Confidence 7899999999999994 45554 5777775442 3445679999999999999999999999986 3589999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 99 PFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999999864 345899999999999999999999988 99999999999999999999999999987643322
Q ss_pred -cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 537 -DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 537 -~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+....+ +...+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~----------------- 232 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSIL----------------- 232 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH-----------------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHH-----------------
Confidence 12233456788999999999999999999999999999999 999995433221 11111
Q ss_pred hhcC-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 615 MKGI-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 615 ~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
..+. .+..+....++.+++.+||+.||++||++.|+++.|+++..
T Consensus 233 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 233 EKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1111 11112233567789999999999999999999999998864
No 98
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=349.78 Aligned_cols=261 Identities=20% Similarity=0.234 Sum_probs=203.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeC---CCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG---KRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~---~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++.. .....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 47899999999999995 6799999999876555556789999999999999999999999873 2347899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++.........+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 99999999875444567999999999999999999999988 999999999999999999999999998765322111
Q ss_pred --------chhcccccccccccccccccC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 538 --------EMVALAKADGYKAPELQRMKK---CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 538 --------~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||....... .....
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~----------- 258 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVAL----------- 258 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHH-----------
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhH-----------
Confidence 112345789999999987543 6899999999999999999999983211000 00000
Q ss_pred cccchHhhhhcC-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC
Q 005749 607 MEVFDMEIMKGI-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 607 ~~~~~~~i~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 663 (679)
.+.... .+..+.....+.+++.+||+.||++|||++|+++.|+.+.+....
T Consensus 259 ------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 259 ------AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ------HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred ------HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 000000 011122335677899999999999999999999999998755443
No 99
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.1e-40 Score=343.38 Aligned_cols=258 Identities=15% Similarity=0.154 Sum_probs=203.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++.+++|++++..++++....+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 47899999999999994 679999999876532 34578999999999999998888887765577889999999 899
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCcccc-
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVA- 536 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~- 536 (679)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++.......
T Consensus 91 L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 91 LEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 99999753 345899999999999999999999988 9999999999999 7889999999999987643322
Q ss_pred -----cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 537 -----DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 537 -----~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.................... ..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~ 239 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----PI 239 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-----CH
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-----hh
Confidence 12234578999999999999899999999999999999999999997654433222211111100000 00
Q ss_pred HhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 612 MEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
..... ....++.+++.+||+.||++|||++|+++.|+++..+
T Consensus 240 ~~~~~-------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 EVLCK-------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHTT-------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhhc-------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 1135677899999999999999999999999988654
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.1e-41 Score=347.35 Aligned_cols=260 Identities=19% Similarity=0.246 Sum_probs=193.6
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.||+|+||+||+|+..+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+ .+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEECCSE-E
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEEEecCC-C
Confidence 68999999999999988899999999975432 234678899999999999999999999987 6789999999986 9
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..... .....
T Consensus 86 l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~ 158 (288)
T 1ob3_A 86 LKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYT 158 (288)
T ss_dssp HHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc-ccccc
Confidence 99988754 245899999999999999999999988 999999999999999999999999999865322 12223
Q ss_pred cccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhc--cccc-----ccchH
Q 005749 541 ALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLE--ETTM-----EVFDM 612 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~~~~ 612 (679)
...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+.......... .... ..+++
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHHCCCChhhchhhhccccccc
Confidence 4568999999999875 45899999999999999999999999553221 1111111110000 0000 00000
Q ss_pred hhhhcCCC----ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 613 EIMKGIRS----PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 613 ~i~~~~~~----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........ .......++.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 001123566789999999999999999999863
No 101
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.9e-41 Score=347.05 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=205.5
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+.. ++..||+|.+.... ...+.+.+|++++++++||||+++++++.+ .+..++||||+++++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~ 95 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGN 95 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCTTEE
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEEEEEcCCCCc
Confidence 378999999999999954 58899999997532 345678999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...........
T Consensus 96 L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 96 LLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 999997643 345899999999999999999999988 999999999999999999999999999877544333344
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 541 ALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
...+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ...... .....
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~-----------------~~~~~ 230 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELL-----------------EKDYR 230 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHH-----------------HTTCC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH-----------------hccCC
Confidence 4567788999999998899999999999999999999 99998543221 111111 11101
Q ss_pred -CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 -SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 -~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.......+.+.+++.+||+.||++|||++|+++.|+++..
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1111223567789999999999999999999999988753
No 102
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-40 Score=348.50 Aligned_cols=263 Identities=19% Similarity=0.285 Sum_probs=190.1
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|++++++++|||||++++++.+ .+..++||||++ |+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVFEFMD-ND 88 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEEECCC-CB
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEEEecC-CC
Confidence 7899999999999994 5699999999976432 345678999999999999999999999987 678999999998 59
Q ss_pred hHHHhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 461 LHDLLHDTIA--GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 461 L~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|.+++..... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~ 164 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV-NT 164 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-CC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCc-cc
Confidence 9999876432 1245899999999999999999999988 9999999999999999999999999998764321 22
Q ss_pred hhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccc-----cc
Q 005749 539 MVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTME-----VF 610 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~-----~~ 610 (679)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+.......-. ...... .+
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE--QLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 234578999999999876 468999999999999999999999996543211 11111111000 000000 00
Q ss_pred hHhhhhcCCCCh---------HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 611 DMEIMKGIRSPM---------EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 611 ~~~i~~~~~~~~---------~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+.+........ .....++.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000000000 0122467899999999999999999999875
No 103
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=365.12 Aligned_cols=248 Identities=15% Similarity=0.161 Sum_probs=197.0
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
++||+|+||+||+|+. .+|+.||+|+++... ....+.+.+|++++.+++|||||++++++.+ .+..|+||||+++
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-~~~~~lVmE~~~g 145 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD-ENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-SSEEEEEECCCCS
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEcCCCC
Confidence 6899999999999995 579999999997532 2345678999999999999999999999998 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.........
T Consensus 146 g~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 146 GDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 9999999764 235899999999999999999999988 9999999999999999999999999998765443333
Q ss_pred hhccccccccccccccc-------ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 539 MVALAKADGYKAPELQR-------MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~-------~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
....+||+.|+|||++. ...++.++|||||||++|||++|+.||.+.... +.......
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~--------- 284 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVH--------- 284 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT---------
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHh---------
Confidence 34568999999999987 356899999999999999999999999543221 11110000
Q ss_pred HhhhhcCCCChHHHHHHHHHHHHhccCcCCCCC---CCHHHHHHH
Q 005749 612 MEIMKGIRSPMEEGLVQALKLAMGCCAPVASVR---PTMDEVVKQ 653 (679)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R---Ps~~evl~~ 653 (679)
...............+++.+++.+||. +|++| |+++|++++
T Consensus 285 ~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000000000011223567789999999 99998 689999775
No 104
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=346.75 Aligned_cols=245 Identities=16% Similarity=0.197 Sum_probs=189.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc--------------------------cCcccHHHHHHHHhccCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--------------------------KDRSSCLPVIRQLGKVRHEN 434 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--------------------------~~~~~~~~Ei~~l~~l~H~n 434 (679)
.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 37899999999999994 5689999999865421 12356899999999999999
Q ss_pred CccceEEeeCC-CCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005749 435 LIPLRAFYQGK-RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVL 513 (679)
Q Consensus 435 Iv~l~~~~~~~-~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NIL 513 (679)
|+++++++.+. .+..++||||+++++|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+|||
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil 169 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLL 169 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEE
Confidence 99999999863 4678999999999999886542 45899999999999999999999988 999999999999
Q ss_pred ecCCCceEEeecccccccCcccccchhcccccccccccccccccC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcc
Q 005749 514 VDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKK---CSSRTDVYAFGILLLEILIGKKPGKSGRNGEF 590 (679)
Q Consensus 514 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~ 590 (679)
++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.+...
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--- 245 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--- 245 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH---
T ss_pred ECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH---
Confidence 9999999999999998764332 1223457999999999988654 37789999999999999999999954321
Q ss_pred cchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 591 VDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 591 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
..+....... .. ..+..+....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ---~~~~~~~~~~-~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 ---MCLHSKIKSQ-AL-----------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHC-CC-----------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHhcc-cC-----------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111111000 00 001111223567789999999999999999999753
No 105
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.3e-41 Score=357.38 Aligned_cols=261 Identities=14% Similarity=0.173 Sum_probs=196.4
Q ss_pred cCccccCCceEEEEEEeCC------CCEEEEEEcccCccc-----------CcccHHHHHHHHhccCCCCCccceEEeeC
Q 005749 382 GQVIEKTTYGTAYKAKLAD------GATIALRLLREGSCK-----------DRSSCLPVIRQLGKVRHENLIPLRAFYQG 444 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 444 (679)
.+.||+|+||.||+|+..+ ++.||||++...... ....+..|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 3789999999999998654 478999998654211 11234455666777889999999999876
Q ss_pred C---CCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCc
Q 005749 445 K---RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD--DFFV 519 (679)
Q Consensus 445 ~---~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~~ 519 (679)
. ....++||||+ +++|.+++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++ .++.
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSCTTC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCCCCe
Confidence 2 14579999999 99999999764 356999999999999999999999988 99999999999999 8899
Q ss_pred eEEeecccccccCcccccc------hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccch
Q 005749 520 SRLTEFGLDQLMVPAVADE------MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDL 593 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l 593 (679)
+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~~ 270 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--KY 270 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--HH
Confidence 9999999998764432211 123459999999999999899999999999999999999999996432221 11
Q ss_pred hHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 594 PSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
..+....... ...+..++.+. ......++.+++..||+.||++||+++++++.|+++.
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 271 VRDSKIRYRE-NIASLMDKCFP------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHHHHHHH-CHHHHHHHHSC------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhh-hHHHHHHHhcc------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 1111111111 11111111110 0112356778999999999999999999999998875
No 106
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.4e-40 Score=341.99 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=204.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++++++|++++..++++....+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 37899999999999994 679999999986543 34578999999999999998888877765567889999999 889
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++........
T Consensus 91 L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 91 LEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99999753 345899999999999999999999988 9999999999999 58899999999999876443221
Q ss_pred ------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 538 ------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 538 ------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+............+....... ..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~ 239 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----PI 239 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-----CH
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-----ch
Confidence 1235578999999999999899999999999999999999999996644332222211111100000 00
Q ss_pred HhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 612 MEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
+.+. ....+++.+++.+||+.||++|||++|+++.|+++....
T Consensus 240 ~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 EVLC-------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHT-------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHH-------hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0000 111256778999999999999999999999999886443
No 107
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.3e-41 Score=357.68 Aligned_cols=243 Identities=18% Similarity=0.240 Sum_probs=196.8
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCc---ccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGS---CKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||.||+|+.. +++.||+|+++... ....+.+.+|.+++..+ +||||+++++++.+ .+..++||||+
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~lv~E~~ 103 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEEEEEEeCC
Confidence 378999999999999964 58899999997542 23456688999999988 89999999999987 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 104 ~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~ 175 (353)
T 2i0e_A 104 NGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-G 175 (353)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-T
T ss_pred CCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccC-C
Confidence 999999999863 35899999999999999999999988 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ...+. +..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~--------------i~~ 235 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQS--------------IME 235 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH--------------HHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHH--------------HHh
Confidence 2234568999999999999999999999999999999999999999543211 11111 111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPT-----MDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-----~~evl~~ 653 (679)
+..........++.+++.+||..||++||+ ++|++++
T Consensus 236 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 236 HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111111223356778999999999999995 4777654
No 108
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-40 Score=349.03 Aligned_cols=259 Identities=16% Similarity=0.227 Sum_probs=194.9
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+++||+|+||.||+|+ ..+++.||||+++.......+.+.+|++++.++ +||||+++++++.+ .+..++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 96 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVFEKMRGG 96 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTC
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEEcCCCC
Confidence 4789999999999999 567999999999776555567899999999985 79999999999987 68899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc---eEEeecccccccCccc-
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV---SRLTEFGLDQLMVPAV- 535 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~~- 535 (679)
+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++......
T Consensus 97 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 97 SILSHIHKR----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp BHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred cHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999864 35899999999999999999999988 999999999999998766 9999999998653221
Q ss_pred -----ccchhcccccccccccccccc-----cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccc
Q 005749 536 -----ADEMVALAKADGYKAPELQRM-----KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEET 605 (679)
Q Consensus 536 -----~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 605 (679)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||.+....+...... .... .
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~~-~ 244 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG----EACP-A 244 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC--------CCH-H
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc----ccch-h
Confidence 111234468999999999874 568999999999999999999999996654322110000 0000 0
Q ss_pred ccccchHhhhhcCCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 606 TMEVFDMEIMKGIRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 606 ~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
....+...+..+...... .....+.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000111122111111 123567789999999999999999999874
No 109
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-40 Score=347.40 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=196.1
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhcc--CCCCCccceEEeeCCC---CceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV--RHENLIPLRAFYQGKR---GEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l--~H~nIv~l~~~~~~~~---~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 478999999999999975 899999998643 234455666666554 8999999999988632 5789999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCceEEeeccccccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH-----EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM 531 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 531 (679)
++|+|.++++. ..+++..++.++.|++.||+|||++. .++|+||||||+|||++.++.+||+|||+++..
T Consensus 118 ~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 118 ENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999975 34899999999999999999999871 113999999999999999999999999999766
Q ss_pred Ccccccc---hhcccccccccccccccccCCCCc------chhHHHHHHHHHHHhC----------CCCCCCCCCCcccc
Q 005749 532 VPAVADE---MVALAKADGYKAPELQRMKKCSSR------TDVYAFGILLLEILIG----------KKPGKSGRNGEFVD 592 (679)
Q Consensus 532 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~DV~S~Gvvl~El~tg----------~~p~~~~~~~~~~~ 592 (679)
....... .....||+.|+|||++.+..++.+ +|||||||++|||++| +.||........ .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 4332211 124579999999999987766665 9999999999999999 555533222111 1
Q ss_pred hhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 593 LPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
...... ..........+... ........++.+++.+||+.||++|||+.||++.|+++.....
T Consensus 272 ~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 272 YEDMRE-IVCIKKLRPSFPNR------WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp HHHHHH-HHTTSCCCCCCCGG------GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhhhHH-HHhhhccCcccccc------chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 111111 11100000000000 0112456778899999999999999999999999999876554
No 110
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.2e-41 Score=342.67 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=198.9
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|++++++++||||+++++++.+. .+..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 378999999999999985 88999999976532 2345789999999999999999999999873 2678999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.+++.... ...+++..++.|+.|++.||+|||+++ ++|+||||||+||++++++.+||+|||++.....
T Consensus 94 ~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~----- 165 (271)
T 3kmu_A 94 GSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS----- 165 (271)
T ss_dssp CBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-----
T ss_pred CcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-----
Confidence 99999998642 235899999999999999999999865 4599999999999999999999999998764322
Q ss_pred hhcccccccccccccccccCCCC---cchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 539 MVALAKADGYKAPELQRMKKCSS---RTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~---k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
....||+.|+|||.+.+..++. ++||||||+++|||++|+.||.+.... ....... .
T Consensus 166 -~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~-------------~ 225 (271)
T 3kmu_A 166 -PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVA-------------L 225 (271)
T ss_dssp -TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHH-------------H
T ss_pred -cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHH-------------h
Confidence 2346889999999988665544 899999999999999999999543211 1111111 1
Q ss_pred hcCCCC-hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 616 KGIRSP-MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 616 ~~~~~~-~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+.... ......++.+++.+||+.||++|||++|+++.|+++..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111111 11223567789999999999999999999999999864
No 111
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-41 Score=346.13 Aligned_cols=250 Identities=18% Similarity=0.294 Sum_probs=202.1
Q ss_pred CccccCCceEEEEEEeC---CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKLA---DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--CCcEEEEEeCCC
Confidence 48999999999999853 577899999986532 345678999999999999999999999954 579999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc-
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~- 537 (679)
++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 94 ~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (287)
T 1u59_A 94 GPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167 (287)
T ss_dssp EEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred CCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence 9999999753 345899999999999999999999988 999999999999999999999999999876433221
Q ss_pred -chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 538 -EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 538 -~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+...+ .
T Consensus 168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~i-----------------~ 227 (287)
T 1u59_A 168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFI-----------------E 227 (287)
T ss_dssp CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHHH-----------------H
T ss_pred eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH-----------------h
Confidence 1223456788999999988889999999999999999998 99999543321 111111 1
Q ss_pred hcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 616 KGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 616 ~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
.+.+ ...+...+++.+++.+||+.||++||++.|+++.|+++..+
T Consensus 228 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 228 QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11122335677899999999999999999999999988643
No 112
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4e-41 Score=348.28 Aligned_cols=254 Identities=23% Similarity=0.372 Sum_probs=189.4
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+.. ..||+|+++.... ...+.+.+|++++++++||||+++++++.. +..++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC--CccEEEEEecCCC
Confidence 378999999999999864 3699999876432 234678999999999999999999997654 5789999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc-ccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV-ADE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~-~~~ 538 (679)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 105 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 105 SLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp EHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999654 345899999999999999999999988 9999999999999999999999999998654321 222
Q ss_pred hhccccccccccccccc---ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 539 MVALAKADGYKAPELQR---MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.....||+.|+|||.+. ...++.++||||||+++|||++|+.||......+ .+...+.. ..... ..
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~----~~~~~----~~- 247 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIEMVGR----GSLSP----DL- 247 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HHHHHHHH----TSCCC----CT-
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HHHHHhcc----cccCc----ch-
Confidence 33457899999999886 5678889999999999999999999995433211 11111111 00000 00
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
. .........+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 248 ~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 S---KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp T---SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h---hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 0011223567789999999999999999999999999864
No 113
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-41 Score=360.34 Aligned_cols=247 Identities=17% Similarity=0.240 Sum_probs=198.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .+|+.||+|++......+...+.+|++++++++|||||++++++.+ .+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEEcCCCCc
Confidence 37899999999999995 5789999999976544445678999999999999999999999987 688999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCceEEeecccccccCcccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD--FFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++...... .
T Consensus 135 L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--~ 206 (387)
T 1kob_A 135 LFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--I 206 (387)
T ss_dssp HHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--C
T ss_pred HHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc--c
Confidence 99999753 345899999999999999999999988 999999999999974 4789999999998764332 2
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ........... .++.
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~------~~~~~i~~~~~---~~~~------ 271 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL------ETLQNVKRCDW---EFDE------ 271 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHCCC---CCCS------
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC---CCCc------
Confidence 23447899999999999889999999999999999999999999543211 11111100000 0000
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........++.+++.+||+.||++|||+.|+++.
T Consensus 272 -~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 -DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0011223567789999999999999999999875
No 114
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-40 Score=352.22 Aligned_cols=254 Identities=22% Similarity=0.361 Sum_probs=201.6
Q ss_pred cCccccCCceEEEEEEe--------CCCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEE
Q 005749 382 GQVIEKTTYGTAYKAKL--------ADGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLL 451 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~--------~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~l 451 (679)
.+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++.. .+..++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 118 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYV 118 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCCEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-CCceEE
Confidence 47899999999999985 3577899999976432 3346789999999999 89999999999987 678999
Q ss_pred EEEecCCCChHHHhhcccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc
Q 005749 452 IYDYFPSRTLHDLLHDTIAG------------KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV 519 (679)
Q Consensus 452 v~ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~ 519 (679)
||||+++|+|.+++...... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 195 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNV 195 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCC
Confidence 99999999999999864321 234899999999999999999999988 999999999999999999
Q ss_pred eEEeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHH
Q 005749 520 SRLTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~ 597 (679)
+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.+.... +..
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~ 269 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ELF 269 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHH
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH------HHH
Confidence 99999999987643321 12233456788999999988889999999999999999999 99998543211 111
Q ss_pred HHHhhcccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 598 KVAVLEETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
... ..+.. ........++.+++.+||+.||++|||++|+++.|+++..
T Consensus 270 ~~~--------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 KLL--------------KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHH--------------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--------------hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111 11110 1111223567789999999999999999999999999864
No 115
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=353.64 Aligned_cols=245 Identities=20% Similarity=0.261 Sum_probs=182.0
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+ .+..++||||+++|+
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 134 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLELVTGGE 134 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEEeCCCCC
Confidence 378999999999999964 58899999997643 34678899999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccccccCccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~~~~ 537 (679)
|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..... .
T Consensus 135 L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~ 205 (349)
T 2w4o_A 135 LFDRIVEK----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--V 205 (349)
T ss_dssp HHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc--c
Confidence 99999763 45899999999999999999999988 999999999999975 889999999999875432 1
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ........... ...
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~~--~~~------- 271 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCEY--YFI------- 271 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTCC--CCC-------
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCCC--ccC-------
Confidence 2234578999999999998899999999999999999999999995433211 01111100000 000
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+.......++.+++.+||+.||++|||+.|+++.
T Consensus 272 -~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 -SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111233567789999999999999999999874
No 116
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.1e-41 Score=350.94 Aligned_cols=257 Identities=16% Similarity=0.285 Sum_probs=203.8
Q ss_pred cCccccCCceEEEEEEeC------CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA------DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-CCccEEEEE
Confidence 478999999999999854 477899999975432 234568999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 455 YFPSRTLHDLLHDTIA------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
|+++|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999975321 1245789999999999999999999988 999999999999999999999999999
Q ss_pred cccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 529 QLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 529 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
+....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.+.... ........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~---- 255 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLRFVME---- 255 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HHHHHHHT----
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------HHHHHHHc----
Confidence 86543322 12234456888999999998889999999999999999999 88898543211 11111100
Q ss_pred cccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 607 MEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
.............+.+++.+||+.||++|||+.|+++.|++.....
T Consensus 256 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 256 ---------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp ---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ---------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 0011111222356778999999999999999999999999986543
No 117
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-40 Score=343.91 Aligned_cols=261 Identities=19% Similarity=0.256 Sum_probs=194.4
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCccc--CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||+||+|+. .+++.||+|+++..... ..+.+.+|++++++++|||||++++++.+ .+..++||||+++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCSE-
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEEecCCC-
Confidence 6899999999999995 56899999999765332 23678899999999999999999999987 6889999999986
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
++.+.+... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 86 ~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 158 (292)
T 3o0g_A 86 DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCY 158 (292)
T ss_dssp EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CSCC
T ss_pred CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc-cccc
Confidence 666666543 345999999999999999999999998 999999999999999999999999999876432 2223
Q ss_pred hcccccccccccccccccC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccccchH-h--
Q 005749 540 VALAKADGYKAPELQRMKK-CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEVFDM-E-- 613 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-~-- 613 (679)
....||+.|+|||++.+.. ++.++|||||||++|||++|..|+...... ...+......... .......... .
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 4457899999999987765 899999999999999999998886443221 1111111111100 0000000000 0
Q ss_pred ------hhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 614 ------IMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 614 ------i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........+....++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000001111234567789999999999999999999864
No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-40 Score=341.00 Aligned_cols=241 Identities=17% Similarity=0.214 Sum_probs=198.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .++..||+|++........+.+.+|++++++++||||+++++++.+ .+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEeccCCCc
Confidence 47899999999999995 4578999999987666667789999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++.......
T Consensus 93 L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-- 163 (277)
T 3f3z_A 93 LFERVVHK----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-- 163 (277)
T ss_dssp HHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--
T ss_pred HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--
Confidence 99998763 45899999999999999999999988 9999999999999 788999999999998764332
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... .... .+..+
T Consensus 164 ~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~--------------~~~~~ 222 (277)
T 3f3z_A 164 MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVML--------------KIREG 222 (277)
T ss_dssp CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH--------------HHHHC
T ss_pred chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHH--------------HHHhC
Confidence 2334578999999998875 4899999999999999999999999543211 1111 11111
Q ss_pred CCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...... ...+.+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 123567789999999999999999999864
No 119
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=351.77 Aligned_cols=251 Identities=24% Similarity=0.416 Sum_probs=195.2
Q ss_pred cCccccCCceEEEEEEeCC-----CCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKLAD-----GATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
.+.||+|+||.||+|+... +..||||.++.... .....+.+|++++++++||||+++++++.. .+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcEEEEeC
Confidence 3789999999999998542 23599999976432 334578999999999999999999999987 6789999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 128 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 128 MENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp CTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999999764 345899999999999999999999988 9999999999999999999999999998764332
Q ss_pred cc--chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 536 AD--EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 536 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
.. ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~------------- 262 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKA------------- 262 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHH-------------
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHH-------------
Confidence 11 1223346778999999998899999999999999999998 99999543211 11111
Q ss_pred hhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 613 EIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 613 ~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+..+.+ +........+.+++.+||+.||++||++.|+++.|+++..
T Consensus 263 -~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 263 -INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp -HHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111 1111233567789999999999999999999999998754
No 120
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=8.1e-41 Score=382.01 Aligned_cols=247 Identities=18% Similarity=0.276 Sum_probs=196.7
Q ss_pred CccccCCceEEEEEEe---CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 383 QVIEKTTYGTAYKAKL---ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~---~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++|.+++|||||++++++.. +..++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 5799999999999964 3467899999976432 235679999999999999999999999975 46899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA- 536 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~- 536 (679)
+|+|.+++.. ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 453 ~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 453 LGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999975 345899999999999999999999988 99999999999999999999999999987643321
Q ss_pred -cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 537 -DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 537 -~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ... .+
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~--------------~i 585 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTA--------------ML 585 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHH--------------HH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHH--------------HH
Confidence 12233456788999999998899999999999999999998 999995432211 111 11
Q ss_pred hhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 615 MKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 615 ~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
..+.+. .......++.+++.+||+.||++||++++|++.|+++.
T Consensus 586 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 586 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 111111 11223356778999999999999999999999998763
No 121
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.4e-41 Score=359.45 Aligned_cols=243 Identities=22% Similarity=0.259 Sum_probs=187.1
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc---cCcccHHHHHHH-HhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC---KDRSSCLPVIRQ-LGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||.||+|+. .+++.||+|+++.... ...+.+.+|..+ ++.++|||||++++++.+ .+..|+||||+
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~lv~E~~ 121 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYI 121 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEEEEeCC
Confidence 47899999999999995 4688999999976432 234456777776 577899999999999998 68999999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 122 ~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~ 193 (373)
T 2r5t_A 122 NGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-N 193 (373)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-C
T ss_pred CCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC-C
Confidence 999999999763 35899999999999999999999988 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .+.... +..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~--------------i~~ 253 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDN--------------ILN 253 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHH--------------HHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHH--------------HHh
Confidence 233456899999999999999999999999999999999999999954321 111111 111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.....+.....+.+++.+||+.||++||++.+.++.
T Consensus 254 ~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 254 KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp SCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred cccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 1111111223567789999999999999998543333
No 122
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-40 Score=367.66 Aligned_cols=242 Identities=19% Similarity=0.332 Sum_probs=198.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
++.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+ .+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeCCC
Confidence 47899999999999995 479999999996542 2334578999999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 100 gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~--~ 170 (476)
T 2y94_A 100 GGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--E 170 (476)
T ss_dssp SEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT--C
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc--c
Confidence 9999999975 345899999999999999999999988 999999999999999999999999999876432 2
Q ss_pred chhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 538 EMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.... .... .+..
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~~~~--------------~i~~ 230 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------TLFK--------------KICD 230 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------HHHH--------------HHHT
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------HHHH--------------HHhc
Confidence 2345679999999999987765 68999999999999999999999543221 1111 1111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.........+++.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 231 GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1111111223567789999999999999999999974
No 123
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.7e-42 Score=355.98 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=182.3
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhc--cCCCCCccceEEeeCCCC---ceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK--VRHENLIPLRAFYQGKRG---EKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~---~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++..... ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 478999999999999874 899999998653 34567888888887 799999999999887332 689999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH--------TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 84 ~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 84 EHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999652 4788889999999999999999 666 999999999999999999999999999
Q ss_pred cccCccccc---chhccccccccccccccccc------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCc
Q 005749 529 QLMVPAVAD---EMVALAKADGYKAPELQRMK------KCSSRTDVYAFGILLLEILIG----------KKPGKSGRNGE 589 (679)
Q Consensus 529 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gvvl~El~tg----------~~p~~~~~~~~ 589 (679)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 765433221 12334799999999998765 344689999999999999999 55654322111
Q ss_pred ccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 590 FVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 590 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
. .......... ........... ....+....+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 236 ~-~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 236 P-SVEEMRKVVC-EQKLRPNIPNR------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp C-CCC-CHHHHT-TSCCCCCCCGG------GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred c-cHHHHHHHHH-HhhcCCCcccc------ccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 0 0000000000 00000000000 0112455678899999999999999999999999999876543
No 124
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=340.93 Aligned_cols=244 Identities=16% Similarity=0.302 Sum_probs=177.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEEEEecCC
Confidence 37899999999999995 679999999996532 2234678999999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++....... .
T Consensus 95 ~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~ 167 (278)
T 3cok_A 95 NGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-E 167 (278)
T ss_dssp TEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred CCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC-C
Confidence 99999999864 346899999999999999999999988 9999999999999999999999999998764322 1
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+... ... ...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---------------~~~----~~~ 228 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---------------KVV----LAD 228 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CC----SSC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---------------HHh----hcc
Confidence 2234578999999999998889999999999999999999999996543221110 000 000
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........++.+++.+||+.||++|||++|+++.
T Consensus 229 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 229 -YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 00011123466789999999999999999999863
No 125
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-40 Score=348.77 Aligned_cols=256 Identities=21% Similarity=0.340 Sum_probs=203.5
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.......++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 47899999999999983 3568999999976532 2345789999999999 79999999999987556699999
Q ss_pred EecCCCChHHHhhcccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceE
Q 005749 454 DYFPSRTLHDLLHDTIAG------------KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSR 521 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k 521 (679)
||+++|+|.+++...... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 999999999999864321 123889999999999999999999988 99999999999999999999
Q ss_pred EeecccccccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHH
Q 005749 522 LTEFGLDQLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKV 599 (679)
Q Consensus 522 l~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~ 599 (679)
|+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.+....+ .....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~--- 263 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR--- 263 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HHHHH---
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HHHHH---
Confidence 999999987643321 22234567889999999998899999999999999999998 999995543221 11110
Q ss_pred HhhcccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 600 AVLEETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 600 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+..+.. .......+++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 264 --------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 264 --------------LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp --------------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------------hccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111110 1111223567789999999999999999999999998753
No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-40 Score=347.61 Aligned_cols=261 Identities=19% Similarity=0.271 Sum_probs=195.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc---cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC---KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEEEecCC
Confidence 37899999999999994 6799999999975322 234578899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++.........+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 116 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~-~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-T 191 (310)
T ss_dssp SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC-c
Confidence 99999999764433556899999999999999999999988 9999999999999999999999999998654321 2
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||.+.... .......... ....
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~-~~~~---------- 256 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEQ-CDYP---------- 256 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHHHHHT-TCSC----------
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHHHhhc-ccCC----------
Confidence 223456899999999999889999999999999999999999999543221 1111111100 0000
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 663 (679)
.........++.+++.+||+.||++|||++|+++.|+++.+...+
T Consensus 257 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 257 -PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 000112235677899999999999999999999999998765444
No 127
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-40 Score=359.44 Aligned_cols=267 Identities=17% Similarity=0.201 Sum_probs=198.5
Q ss_pred CccccC--CceEEEEEEeC-CCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 383 QVIEKT--TYGTAYKAKLA-DGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 383 ~~ig~G--~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
+.||+| +||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+ .+..++|||||+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~ 109 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSFMA 109 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEEEEEccC
Confidence 789999 99999999954 799999999976432 234567889999999999999999999997 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA- 536 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~- 536 (679)
+|+|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+........
T Consensus 110 ~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 110 YGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp TCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 999999997643 245899999999999999999999988 99999999999999999999999999865422111
Q ss_pred -----cchhcccccccccccccccc--cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhc------
Q 005749 537 -----DEMVALAKADGYKAPELQRM--KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLE------ 603 (679)
Q Consensus 537 -----~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~------ 603 (679)
.......||..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ..........
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccccc
Confidence 11223478899999999987 57899999999999999999999999654332211 0000000000
Q ss_pred ---ccc---------cccchHhhhh-------c---CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhh
Q 005749 604 ---ETT---------MEVFDMEIMK-------G---IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEEN 657 (679)
Q Consensus 604 ---~~~---------~~~~~~~i~~-------~---~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 657 (679)
... .......+.. . ..+......+++.+++.+||+.||++|||++|+++. ++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 000 0000000000 0 000111223567889999999999999999999876 4444
No 128
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=351.83 Aligned_cols=236 Identities=17% Similarity=0.289 Sum_probs=195.5
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--------cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--------KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv 452 (679)
.+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-QGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-CCEEEEE
Confidence 4789999999999999 56789999999976532 134578899999999999999999999987 6789999
Q ss_pred EEecCCC-ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccccccc
Q 005749 453 YDYFPSR-TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM 531 (679)
Q Consensus 453 ~ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 531 (679)
|||+.+| +|.+++... ..+++..++.|+.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 108 ~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 9999777 999999763 45999999999999999999999988 999999999999999999999999999876
Q ss_pred CcccccchhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccc
Q 005749 532 VPAVADEMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVF 610 (679)
Q Consensus 532 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (679)
.... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ..
T Consensus 181 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------------------~~ 237 (335)
T 3dls_A 181 ERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------------------TV 237 (335)
T ss_dssp CTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------------GT
T ss_pred CCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------------HH
Confidence 4332 2234578999999999987776 7899999999999999999999943110 00
Q ss_pred hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 611 DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
............++.+++.+||+.||++|||++|+++.
T Consensus 238 -----~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 -----EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001111123457789999999999999999999986
No 129
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.2e-41 Score=349.41 Aligned_cols=254 Identities=18% Similarity=0.271 Sum_probs=189.4
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccC---cccHHHHHHHHhccCCCCCccceEEeeCCCC---ceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKD---RSSCLPVIRQLGKVRHENLIPLRAFYQGKRG---EKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~---~~~lv~e 454 (679)
.+.||+|+||.||+|+ ..+++.||||+++...... .+.+.+|++++++++|||||++++++..... ..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 3789999999999999 4679999999997653322 3468899999999999999999999875321 3499999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+++|+|.++++.. ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 97 YVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred cCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999999764 35899999999999999999999988 999999999999999999999999999876433
Q ss_pred cc--cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 535 VA--DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 535 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||.+.... ........... ..+
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~----~~~ 239 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDP----IPP 239 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCC----CCH
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCC----CCc
Confidence 21 1223456899999999999889999999999999999999999999543211 11111111000 000
Q ss_pred hhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHH-HHHHhhC
Q 005749 613 EIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVV-KQLEENR 658 (679)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl-~~L~~~~ 658 (679)
.... +....++.+++.+||+.||++||++.+++ ..+.+..
T Consensus 240 ~~~~------~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 240 SARH------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp HHHS------TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cccc------CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0000 01235677899999999999999765554 5565553
No 130
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.3e-40 Score=357.31 Aligned_cols=247 Identities=17% Similarity=0.254 Sum_probs=187.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhc-cCCCCCccceEEeeC---CCCceEEEEEecC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGK-VRHENLIPLRAFYQG---KRGEKLLIYDYFP 457 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~-l~H~nIv~l~~~~~~---~~~~~~lv~ey~~ 457 (679)
++||+|+||+||+|+. .+|+.||||+++. ...+.+|++++.+ .+|||||+++++|.. ..+..++|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 6899999999999994 5689999999864 3467889998754 489999999998764 2456899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccccccCcc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 534 (679)
+|+|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 143 GGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp SEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 999999998642 345899999999999999999999988 999999999999997 789999999999865432
Q ss_pred cccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCccc-chhHHHHHHhhcccccccchHh
Q 005749 535 VADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFV-DLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....... .+...+... . ....
T Consensus 218 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~----~-~~~~--- 287 (400)
T 1nxk_A 218 --NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG----Q-YEFP--- 287 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT----C-CCCC---
T ss_pred --CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC----c-ccCC---
Confidence 2234567899999999999999999999999999999999999999654332211 111111100 0 0000
Q ss_pred hhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 614 IMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 614 i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
.........++.+++.+||+.||++|||+.|++++-
T Consensus 288 -----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 288 -----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp -----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000112335677899999999999999999999863
No 131
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-40 Score=340.09 Aligned_cols=240 Identities=19% Similarity=0.308 Sum_probs=174.8
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcc---cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSC---KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+ ..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++||||+ +
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~-~ 96 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIEYA-G 96 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSCEEEEEECC-C
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCeEEEEehhc-C
Confidence 789999999999999 56799999999976432 234578899999999999999999999987 67899999999 6
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...... .
T Consensus 97 ~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 167 (275)
T 2eue_A 97 NELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--F 167 (275)
T ss_dssp EEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc--c
Confidence 6888888753 45899999999999999999999988 9999999999999999999999999998664332 2
Q ss_pred hhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 539 MVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ..... .+..+
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~--------------~~~~~ 227 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFK--------------NISNG 227 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH--------------HHHHT
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHH--------------HHHhC
Confidence 234568999999999987765 7899999999999999999999954321 11111 11111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........+.+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 228 VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 111112233567789999999999999999999864
No 132
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.9e-40 Score=343.50 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=198.4
Q ss_pred hcCccccCCceEEEEEEe-CCCCEEEEEEcccCccc------CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEE
Q 005749 381 TGQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK------DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
..+.||+|+||.||+|+. .+|+.||+|.++..... ..+.+.+|++++++++||||+++++++.+ .+..++||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 94 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLIL 94 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEEEEE
Confidence 357899999999999995 46999999999764322 24568999999999999999999999987 67899999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----ceEEeeccccc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF----VSRLTEFGLDQ 529 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 529 (679)
||+++++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+++
T Consensus 95 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 95 ELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999976 345899999999999999999999988 99999999999999887 79999999998
Q ss_pred ccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.+.... +....... . ...
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~-~--~~~ 236 (321)
T 2a2a_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITS-V--SYD 236 (321)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHT-T--CCC
T ss_pred ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHh-c--ccc
Confidence 764322 223457899999999999889999999999999999999999999543211 11111000 0 000
Q ss_pred chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 ~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+++.... .....+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 FDEEFFS-------HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCHHHHT-------TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cChhhhc-------ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111 122457789999999999999999999874
No 133
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-40 Score=345.26 Aligned_cols=257 Identities=19% Similarity=0.216 Sum_probs=192.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccC---cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKD---RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++......+ .+.+.+|++++.+++||||+++++++.. .+..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEEEEEecC
Confidence 37899999999999995 478899999997653322 3678899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 118 ~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 190 (309)
T 2h34_A 118 GVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190 (309)
T ss_dssp CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence 99999999864 35899999999999999999999988 999999999999999999999999999876443333
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ........... ..+. .
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~----~~~~---~ 256 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAI----PRPS---T 256 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCC----CCGG---G
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCC----CCcc---c
Confidence 33455789999999999988999999999999999999999999954211 11111111100 0000 0
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHHhhCCCCCC
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRP-TMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 663 (679)
..+....++.+++.+||+.||++|| +++++++.|++.......
T Consensus 257 ---~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 257 ---VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp ---TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred ---cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 0111224567899999999999999 999999999998765443
No 134
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.8e-40 Score=353.06 Aligned_cols=246 Identities=15% Similarity=0.220 Sum_probs=187.5
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.++++++|||||++++++.+ .+..++||||+++|+|
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECCCSCBH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEeCCCCCH
Confidence 7899999999999995 479999999997643 334678999999999999999999999997 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc--eEEeecccccccCcccccch
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV--SRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~~~~~~~~ 539 (679)
.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++..... ...
T Consensus 104 ~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~ 174 (361)
T 3uc3_A 104 YERICNA----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQP 174 (361)
T ss_dssp HHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCC
Confidence 9999763 35899999999999999999999988 999999999999987765 999999999854222 223
Q ss_pred hcccccccccccccccccCCCCc-chhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 540 VALAKADGYKAPELQRMKKCSSR-TDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k-~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....||+.|+|||++.+..++.+ +||||+||++|||++|+.||.+..... .............. .
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~------------~ 240 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKY------------S 240 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCC------------C
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCC------------C
Confidence 34579999999999988777665 899999999999999999996543321 11111111111000 0
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+......+++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01111123567789999999999999999999986
No 135
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=353.65 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=198.8
Q ss_pred cCccccCCceEEEEEEe----CCCCEEEEEEcccCc----ccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAKL----ADGATIALRLLREGS----CKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv 452 (679)
.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++.. .+..++|
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv 137 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ETKLHLI 137 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TTEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-CceEEEE
Confidence 47899999999999996 478999999987542 23456678899999999 69999999999987 6789999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccC
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMV 532 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 532 (679)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 138 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 138 LDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp ECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999864 35899999999999999999999988 9999999999999999999999999998765
Q ss_pred cccccchhcccccccccccccccc--cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccc
Q 005749 533 PAVADEMVALAKADGYKAPELQRM--KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVF 610 (679)
Q Consensus 533 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (679)
...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+....
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~---------- 278 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRI---------- 278 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHH----------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHH----------
Confidence 443334445679999999999885 347899999999999999999999995433221 111111111
Q ss_pred hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHHH
Q 005749 611 DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQL 654 (679)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~L 654 (679)
..............+.+++.+||+.||++|| +++|+++..
T Consensus 279 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 ----LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----hccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1111111222335567899999999999999 999998764
No 136
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-40 Score=351.51 Aligned_cols=260 Identities=19% Similarity=0.204 Sum_probs=195.3
Q ss_pred HHHHHHhh--cCccccCCceEEEEEEe-CCCCEEEEEEcccC-----cccCcccHHHHHHHHhccCCCCCccceEEeeCC
Q 005749 374 LEDVLNAT--GQVIEKTTYGTAYKAKL-ADGATIALRLLREG-----SCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK 445 (679)
Q Consensus 374 ~~~l~~~~--~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 445 (679)
+.++.... .+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 34444333 47899999999999994 56889999998653 22345678999999999999999999999987
Q ss_pred CCceEEEEEecCCCChHHHhhcccCC------------------------------------CCCCCHHHHHHHHHHHHH
Q 005749 446 RGEKLLIYDYFPSRTLHDLLHDTIAG------------------------------------KPVLNWARRHKIALGIAR 489 (679)
Q Consensus 446 ~~~~~lv~ey~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~ 489 (679)
.+..++||||+++|+|.+++...... ...+++..++.|+.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 67899999999999999999632110 122467788899999999
Q ss_pred HHHHHhcCCCCCeeecCCCCCCeeecCCC--ceEEeecccccccCccc---ccchhcccccccccccccccc--cCCCCc
Q 005749 490 GLAYLHTGHEIPITHGNVRSKNVLVDDFF--VSRLTEFGLDQLMVPAV---ADEMVALAKADGYKAPELQRM--KKCSSR 562 (679)
Q Consensus 490 gL~~LH~~~~~~ivHrDlkp~NILl~~~~--~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~k 562 (679)
||+|||+++ |+||||||+||+++.++ .+||+|||+++.+.... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999988 99999999999998776 89999999998653321 112345679999999999875 678999
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCC
Q 005749 563 TDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVAS 642 (679)
Q Consensus 563 ~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 642 (679)
+|||||||++|||++|+.||.+.... +........... ... +......+.+.+++.+||+.||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLC--FEN--------PNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC--TTS--------GGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccc--cCC--------cccccCCHHHHHHHHHHcCCChh
Confidence 99999999999999999999543221 111111111000 000 00111235677899999999999
Q ss_pred CCCCHHHHHHH
Q 005749 643 VRPTMDEVVKQ 653 (679)
Q Consensus 643 ~RPs~~evl~~ 653 (679)
+||++.|+++.
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999885
No 137
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=345.11 Aligned_cols=240 Identities=19% Similarity=0.210 Sum_probs=187.4
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcc--cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSC--KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||+||+|+.. +|+.||||++..... .....+..|+..+.++ +|||||+++++|.+ .+..++||||+
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv~e~~- 139 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQTELC- 139 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECC-
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEEEecc-
Confidence 478999999999999964 799999999865432 2234556666666666 89999999999987 68899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 140 ~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--~ 211 (311)
T 3p1a_A 140 GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--G 211 (311)
T ss_dssp CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC--C
Confidence 66999988765 345999999999999999999999988 999999999999999999999999998876432 2
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .+.. ... ....+....
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~~~--~~~----~~~~~~~~~- 275 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GWQQ--LRQ----GYLPPEFTA- 275 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HHHH--HTT----TCCCHHHHT-
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHH--Hhc----cCCCccccc-
Confidence 2334568999999998875 79999999999999999999977763211 1110 000 011111111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
....++.+++.+||+.||++|||++|+++.
T Consensus 276 ------~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 276 ------GLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ------TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 123567789999999999999999999863
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=350.93 Aligned_cols=270 Identities=23% Similarity=0.331 Sum_probs=193.1
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHH--HhccCCCCCccceEEeeC----CCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQ--LGKVRHENLIPLRAFYQG----KRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~--l~~l~H~nIv~l~~~~~~----~~~~~~lv~ey 455 (679)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. .....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 37899999999999987 68999999986532 3344445444 556899999999975542 23457899999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCCCeeecCCCCCCeeecCCCceEEeecc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG---------HEIPITHGNVRSKNVLVDDFFVSRLTEFG 526 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~---------~~~~ivHrDlkp~NILl~~~~~~kl~DFG 526 (679)
+++|+|.+++... ..++..+++|+.|+++||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 94 ~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 94 YPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp CTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCT
T ss_pred CCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeecc
Confidence 9999999999753 358999999999999999999998 6 9999999999999999999999999
Q ss_pred cccccCccc-------ccchhcccccccccccccccc-------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 005749 527 LDQLMVPAV-------ADEMVALAKADGYKAPELQRM-------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVD 592 (679)
Q Consensus 527 la~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~ 592 (679)
+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998764321 112234569999999999876 456789999999999999999987764433221111
Q ss_pred hhHH-----------HHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC-
Q 005749 593 LPSI-----------VKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR- 660 (679)
Q Consensus 593 l~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~- 660 (679)
.... ........... +.+.. ..........++.+++.+||+.||++|||++|+++.|+++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQR----PKFPE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCC----CCCCT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccC----CCCCc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1000 00000000000 00000 0011223556788999999999999999999999999998743
Q ss_pred CCCCCCCC
Q 005749 661 NRSALYSP 668 (679)
Q Consensus 661 ~~~~~~~~ 668 (679)
.+.....|
T Consensus 321 ~~~~~~~~ 328 (336)
T 3g2f_A 321 ERNKSVSP 328 (336)
T ss_dssp CC------
T ss_pred HhcccCCC
Confidence 33333333
No 139
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-40 Score=341.38 Aligned_cols=242 Identities=20% Similarity=0.300 Sum_probs=194.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEEEEecCC
Confidence 37899999999999984 567899999986532 2234578899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--- 162 (279)
T 3fdn_A 93 LGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 162 (279)
T ss_dssp TEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc---
Confidence 99999999764 34899999999999999999999988 999999999999999999999999998754322
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +...
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~--------------~~~~ 222 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKR--------------ISRV 222 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH--------------HHHT
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHHH--------------HHhC
Confidence 223457899999999999889999999999999999999999999543211 11110 0111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
...........+.+++.+||+.||++|||++|+++.-
T Consensus 223 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 223 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1111112234567899999999999999999999864
No 140
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.8e-40 Score=366.02 Aligned_cols=258 Identities=15% Similarity=0.170 Sum_probs=189.7
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCC-----CceEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-----GEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-----~~~~lv~ 453 (679)
.+.||+|+||+||+|+ ..+++.||||++.... ....+.+.+|+++++.++|||||++++++.... ...++||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 3789999999999998 5568999999997542 233557889999999999999999999997532 4579999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
|||++ +|.+.+.. .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 147 E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp ECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred eCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99976 57776643 3899999999999999999999998 99999999999999999999999999987643
Q ss_pred ccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHh------------
Q 005749 534 AVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAV------------ 601 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~------------ 601 (679)
. .......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+ .+...+...-
T Consensus 217 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~--~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 217 S--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHTTSCH
T ss_pred C--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHHcch
Confidence 2 22345689999999999999999999999999999999999999996543211 1111111000
Q ss_pred ------hcc-cccccchHhhh-hc----CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 602 ------LEE-TTMEVFDMEIM-KG----IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 602 ------~~~-~~~~~~~~~i~-~~----~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
... ......-+... .. .........+++.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000000 00 000011224678899999999999999999999875
No 141
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.4e-41 Score=350.52 Aligned_cols=265 Identities=22% Similarity=0.327 Sum_probs=202.3
Q ss_pred cCccccCCceEEEEEEeC-----CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA-----DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-----~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~e 454 (679)
.+.||+|+||+||++++. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+. ....++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 378999999999998643 688999999976532 3356789999999999999999999999863 356899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred cccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999753 3899999999999999999999988 999999999999999999999999999876443
Q ss_pred cc--cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc-cccccch
Q 005749 535 VA--DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE-TTMEVFD 611 (679)
Q Consensus 535 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~ 611 (679)
.. .......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ..... ..... .....+.
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~----~~~~~--~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK----FLELI--GIAQGQMTVLRLT 261 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH----HHHHH--CSCCHHHHHHHHH
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh----hhhhh--cccccchhHHHHH
Confidence 21 1223456788899999999888999999999999999999999998432110 00000 00000 0000001
Q ss_pred HhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCC
Q 005749 612 MEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPR 660 (679)
Q Consensus 612 ~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 660 (679)
..+..+.. ........++.+++.+||+.||++|||++|+++.|+++...
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 11111111 11223345778899999999999999999999999988643
No 142
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.1e-40 Score=356.57 Aligned_cols=242 Identities=20% Similarity=0.299 Sum_probs=186.4
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc--------ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS--------CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv 452 (679)
.+.||+|+||.||+|+ ..+++.||||++.... ......+.+|++++++++|||||++++++.. +..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--EDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES--SEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec--CceEEE
Confidence 4789999999999999 4568999999986532 1223468999999999999999999999865 568999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CceEEeeccccc
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF---FVSRLTEFGLDQ 529 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~ 529 (679)
|||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+++
T Consensus 218 ~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 218 LELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 999999999998875 345899999999999999999999988 9999999999999754 459999999998
Q ss_pred ccCcccccchhcccccccccccccccc---cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQRM---KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..
T Consensus 291 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~----------- 355 (419)
T 3i6u_A 291 ILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKD----------- 355 (419)
T ss_dssp SCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHH-----------
T ss_pred ecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHH-----------
Confidence 76432 22345679999999999863 56888999999999999999999999543322 11111
Q ss_pred cccchHhhhhcCCCChHH----HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 607 MEVFDMEIMKGIRSPMEE----GLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~~----~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+..+.....++ ....+.+++.+||+.||++|||++|++++
T Consensus 356 ------~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 ------QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ------HHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------HHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 111111111111 23567789999999999999999999874
No 143
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-40 Score=341.85 Aligned_cols=246 Identities=25% Similarity=0.394 Sum_probs=193.1
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+.||+|+||.||+|+.. |+.||||.++... ..+.+.+|++++++++||||+++++++....+..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 478999999999999874 8899999997542 4567899999999999999999999987655678999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..... ...
T Consensus 103 ~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~~ 173 (278)
T 1byg_A 103 VDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDT 173 (278)
T ss_dssp HHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred HHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc----ccC
Confidence 99997642 223789999999999999999999988 999999999999999999999999998865322 123
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC-
Q 005749 542 LAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR- 619 (679)
Q Consensus 542 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~- 619 (679)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .. .. .+..+..
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~---~~--------------~~~~~~~~ 233 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DV---VP--------------RVEKGYKM 233 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GH---HH--------------HHTTTCCC
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HH---HH--------------HHhcCCCC
Confidence 357888999999988889999999999999999998 99998543221 11 11 1111111
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.......+.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 1112223567789999999999999999999999998854
No 144
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-40 Score=340.24 Aligned_cols=248 Identities=16% Similarity=0.258 Sum_probs=192.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEEeCCCC
Confidence 47899999999999994 568999999987653 3345778999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCcccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~ 536 (679)
+|.+++.........+++..++.|+.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 106 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~-- 180 (285)
T 3is5_A 106 ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-- 180 (285)
T ss_dssp BHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred cHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc--
Confidence 999998754322456999999999999999999999988 9999999999999 45688999999999876432
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.......||+.|+|||.+. ..++.++||||||+++|||++|+.||.+.... ............
T Consensus 181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~---------- 243 (285)
T 3is5_A 181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQKATYKEPN---------- 243 (285)
T ss_dssp ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC----------
T ss_pred ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhhhccCCcc----------
Confidence 2234557899999999876 56899999999999999999999999543211 111111000000
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........+++.+++.+||+.||++|||+.|+++.
T Consensus 244 -~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 244 -YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000123567789999999999999999999863
No 145
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.5e-40 Score=367.70 Aligned_cols=249 Identities=17% Similarity=0.237 Sum_probs=200.1
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
++||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++|||||++++++.+ .+..|+||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEEEEeccC
Confidence 5799999999999996 469999999996542 2334578899999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.+++.........+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+.... ..
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~-~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TK 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-CC
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCC-cc
Confidence 9999999765433456999999999999999999999988 9999999999999999999999999998764332 12
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ......+. +....
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~--------------i~~~~ 409 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQR--------------VLEQA 409 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHH--------------HHHCC
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHH--------------Hhhcc
Confidence 234589999999999999999999999999999999999999996543211 11111111 11111
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTM-----DEVVK 652 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~-----~evl~ 652 (679)
....+.....+.+++.+||+.||++||++ +|+++
T Consensus 410 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11112234567789999999999999975 56654
No 146
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=350.59 Aligned_cols=263 Identities=19% Similarity=0.270 Sum_probs=191.6
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.||+|+||+||+|+. .+++.||+|+++.... .....+.+|++++++++||||+++++++.+ .+..++||||++ |+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEECCS-EE
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEecccc-cC
Confidence 6899999999999995 4799999999975432 233466789999999999999999999987 678999999997 59
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 86 l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~ 158 (324)
T 3mtl_A 86 LKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKTYD 158 (324)
T ss_dssp HHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC-ccccc
Confidence 99988764 345899999999999999999999988 999999999999999999999999999865432 22233
Q ss_pred cccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh---cccccccchHhhhh
Q 005749 541 ALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL---EETTMEVFDMEIMK 616 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~i~~ 616 (679)
...||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ ....+..... ...+..........
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhc
Confidence 4578999999999876 568999999999999999999999996543221 1111111111 00111111000000
Q ss_pred cC-----C-CC----hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhh
Q 005749 617 GI-----R-SP----MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEEN 657 (679)
Q Consensus 617 ~~-----~-~~----~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 657 (679)
.. . .. .+....++.+++.+||+.||++|||++|+++. +.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence 00 0 00 01123567789999999999999999999884 4444
No 147
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-40 Score=357.40 Aligned_cols=260 Identities=20% Similarity=0.334 Sum_probs=185.5
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc--ccCcccHHHHHHHHhccC-CCCCccceEEeeCC-CCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS--CKDRSSCLPVIRQLGKVR-HENLIPLRAFYQGK-RGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~-~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+.++.+++ |||||++++++... ....++|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 3789999999999999 4679999999986542 233456789999999997 99999999999753 34689999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc--
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA-- 534 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~-- 534 (679)
+ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 94 ~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 94 E-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp S-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred C-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 7 599999875 35899999999999999999999988 999999999999999999999999999865321
Q ss_pred ------------------cccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhH
Q 005749 535 ------------------VADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPS 595 (679)
Q Consensus 535 ------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~ 595 (679)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~~~~ 242 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN--QLER 242 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence 0112344689999999999876 678999999999999999999999996543211 1111
Q ss_pred HHHHHhhcccc------cccchHh----hhh-------cCCCChH-------------HHHHHHHHHHHhccCcCCCCCC
Q 005749 596 IVKVAVLEETT------MEVFDME----IMK-------GIRSPME-------------EGLVQALKLAMGCCAPVASVRP 645 (679)
Q Consensus 596 ~~~~~~~~~~~------~~~~~~~----i~~-------~~~~~~~-------------~~~~~~~~l~~~cl~~dP~~RP 645 (679)
.... ...... ...+... +.. ......+ ...+++.+++.+||+.||++||
T Consensus 243 i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 321 (388)
T 3oz6_A 243 IIGV-IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRI 321 (388)
T ss_dssp HHHH-HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHh-cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCC
Confidence 1110 000000 0000000 000 0000000 1235678999999999999999
Q ss_pred CHHHHHHH
Q 005749 646 TMDEVVKQ 653 (679)
Q Consensus 646 s~~evl~~ 653 (679)
|++|++++
T Consensus 322 t~~e~l~H 329 (388)
T 3oz6_A 322 SANDALKH 329 (388)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhCC
Confidence 99999887
No 148
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-40 Score=348.55 Aligned_cols=254 Identities=23% Similarity=0.343 Sum_probs=199.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEE--EEEEcccC-cccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATI--ALRLLREG-SCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~v--AvK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+. .++..+ |+|.++.. .....+.+.+|++++.++ +||||+++++++.+ .+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv~e~~ 108 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYA 108 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEEEEecC
Confidence 47899999999999994 456644 99998754 234566799999999999 89999999999987 67899999999
Q ss_pred CCCChHHHhhccc------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEee
Q 005749 457 PSRTLHDLLHDTI------------AGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTE 524 (679)
Q Consensus 457 ~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 524 (679)
++|+|.+++.... .....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~D 185 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIAD 185 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEcc
Confidence 9999999997642 11346899999999999999999999988 99999999999999999999999
Q ss_pred cccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhc
Q 005749 525 FGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLE 603 (679)
Q Consensus 525 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~ 603 (679)
||+++..... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+.... ......
T Consensus 186 fg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~--- 254 (327)
T 1fvr_A 186 FGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKL--- 254 (327)
T ss_dssp TTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHG---
T ss_pred cCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------HHHHHh---
Confidence 9998754221 12233456788999999988889999999999999999998 99999543211 111111
Q ss_pred ccccccchHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 604 ETTMEVFDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 604 ~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..+.. ........++.+++.+||+.||++|||++|+++.|+++....
T Consensus 255 -----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 -----------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -----------GGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -----------hcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111 111122356778999999999999999999999999886544
No 149
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=351.72 Aligned_cols=257 Identities=19% Similarity=0.255 Sum_probs=186.0
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCCccceEEee-------CCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENLIPLRAFYQ-------GKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~-------~~~~~~~lv 452 (679)
.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ......++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 47899999999999994 579999999987655455667899999999996 999999999984 224457999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccC
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMV 532 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 532 (679)
|||+. |+|.+++..... ...+++..++.|+.||+.||+|||+++ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 113 ~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 189 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189 (337)
T ss_dssp EECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred EEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence 99996 699999875332 345999999999999999999999865 359999999999999999999999999998764
Q ss_pred ccccc-----------chhcccccccccccccc---cccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHH
Q 005749 533 PAVAD-----------EMVALAKADGYKAPELQ---RMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVK 598 (679)
Q Consensus 533 ~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~ 598 (679)
..... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||........ ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~ 263 (337)
T 3ll6_A 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------VN 263 (337)
T ss_dssp SCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred ccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh------hc
Confidence 32211 11244689999999998 566789999999999999999999999954322110 00
Q ss_pred HHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC
Q 005749 599 VAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS 663 (679)
Q Consensus 599 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 663 (679)
.... ..........+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 264 -------------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 264 -------------GKYS---IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ---------------CC---CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred -------------Cccc---CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 0000 000111123466799999999999999999999999988654433
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=357.07 Aligned_cols=271 Identities=16% Similarity=0.213 Sum_probs=207.1
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCC-CceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-GEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-~~~~lv~ey~~~ 458 (679)
.++||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.... ...++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 378999999999999954 59999999997643 234567889999999999999999999988632 367999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCceEEeecccccccCcc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV----DDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~~~~ 534 (679)
|+|.+++..... ...+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 94 GSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999986533 234899999999999999999999988 9999999999999 78888999999999876433
Q ss_pred cccchhcccccccccccccccc--------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc--
Q 005749 535 VADEMVALAKADGYKAPELQRM--------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE-- 604 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~-- 604 (679)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .+.........
T Consensus 170 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~~~~p~ 245 (396)
T 4eut_A 170 E--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITGKPS 245 (396)
T ss_dssp G--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHHHSCCT
T ss_pred C--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHhcCCCc
Confidence 2 2334579999999998864 56788999999999999999999999643322111 11111111111
Q ss_pred -ccccc---------chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 605 -TTMEV---------FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 605 -~~~~~---------~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..... +...+. ............+.+++.+||+.||++||+++|+++.++++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMP-VSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCC-TTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCC-cccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 00000 000000 000112445566778999999999999999999999999987653
No 151
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.6e-40 Score=344.99 Aligned_cols=255 Identities=19% Similarity=0.303 Sum_probs=191.5
Q ss_pred cCccccCCceEEEEEEeC----CCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCC----ceEE
Q 005749 382 GQVIEKTTYGTAYKAKLA----DGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRG----EKLL 451 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~----~~~l 451 (679)
.+.||+|+||.||+|+.. ++..||+|.++.... ...+.+.+|++++++++||||+++++++.+... ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 478999999999999843 345899999975432 234578999999999999999999999986322 3599
Q ss_pred EEEecCCCChHHHhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccccc
Q 005749 452 IYDYFPSRTLHDLLHDTI--AGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529 (679)
Q Consensus 452 v~ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 529 (679)
||||+++|+|.+++.... .....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcce
Confidence 999999999999985432 22456999999999999999999999988 9999999999999999999999999998
Q ss_pred ccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhccccc
Q 005749 530 LMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTM 607 (679)
Q Consensus 530 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (679)
....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .+.. .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~---~-------- 261 (313)
T 3brb_A 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMYD---Y-------- 261 (313)
T ss_dssp ---------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH---H--------
T ss_pred ecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHHH---H--------
Confidence 7643321 12233457788999999998899999999999999999999 88898543221 1111 1
Q ss_pred ccchHhhhhcC-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 608 EVFDMEIMKGI-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 608 ~~~~~~i~~~~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
+..+. ..........+.+++.+||+.||++|||++++++.|+++..
T Consensus 262 ------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 262 ------LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp ------HHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 11112233567889999999999999999999999998753
No 152
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-40 Score=353.22 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc---cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC---KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|++++++++|||||++++++.+ .+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEEEecCC
Confidence 3689999999999999 46799999999975432 223568899999999999999999999987 678999999997
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 -g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 138 -GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp -EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred -CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 6888888653 346899999999999999999999988 999999999999999999999999999876432
Q ss_pred chhccccccccccccccc---ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 538 EMVALAKADGYKAPELQR---MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ............ . .
T Consensus 208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~~-~-----~- 272 (348)
T 1u5q_A 208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNES-P-----A- 272 (348)
T ss_dssp --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCC-C-----C-
T ss_pred --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCC-C-----C-
Confidence 2457899999999874 56789999999999999999999999854321 111111111100 0 0
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLE 655 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~ 655 (679)
.........+.+++.+||+.||++|||++|+++..-
T Consensus 273 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 273 -----LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred -----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 001112345678999999999999999999987644
No 153
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=347.10 Aligned_cols=259 Identities=21% Similarity=0.349 Sum_probs=191.4
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCccc--CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||+||+|+. .+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+ .+..++||||++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSEE
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEEEeCCCc
Confidence 6899999999999995 45999999998654322 24568899999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 88 ~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 159 (311)
T 4agu_A 88 VLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-DYY 159 (311)
T ss_dssp HHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred hHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-ccc
Confidence 999988753 45899999999999999999999988 9999999999999999999999999998764322 223
Q ss_pred hcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc--cccch-Hhhh
Q 005749 540 VALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT--MEVFD-MEIM 615 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~-~~i~ 615 (679)
....||..|+|||++.+ ..++.++||||+|+++|||++|+.||.+....+.. ..+......... ...+. ....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL---YLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhccccccccccccccccc
Confidence 34578999999999875 56899999999999999999999999654322111 111111000000 00000 0000
Q ss_pred hcCC-------CCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIR-------SPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~-------~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+.. ... +.....+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 000 1223457789999999999999999999875
No 154
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=350.68 Aligned_cols=261 Identities=15% Similarity=0.218 Sum_probs=194.3
Q ss_pred cCccccCCceEEEEEEeC----CCCEEEEEEcccCccc-----------CcccHHHHHHHHhccCCCCCccceEEeeCC-
Q 005749 382 GQVIEKTTYGTAYKAKLA----DGATIALRLLREGSCK-----------DRSSCLPVIRQLGKVRHENLIPLRAFYQGK- 445 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~- 445 (679)
.+.||+|+||.||+|+.. ++..||+|++...... ..+.+.+|+..+..++||||+++++++...
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 478999999999999964 6789999998754321 223467888899999999999999998752
Q ss_pred --CCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--ceE
Q 005749 446 --RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF--VSR 521 (679)
Q Consensus 446 --~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--~~k 521 (679)
....++||||+ +++|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++ .+|
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTSEE
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCcEE
Confidence 46789999999 99999999864 26899999999999999999999988 99999999999999887 999
Q ss_pred EeecccccccCccccc------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhH
Q 005749 522 LTEFGLDQLMVPAVAD------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPS 595 (679)
Q Consensus 522 l~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~ 595 (679)
|+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ... .
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~-~ 271 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-VAV-Q 271 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-HHH-H
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-HHH-H
Confidence 9999999876433211 1244578999999999998899999999999999999999999995322211 111 1
Q ss_pred HHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 596 IVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
........ .+...+... .+......++.+++.+||+.||++||++++|++.|++...
T Consensus 272 ~~~~~~~~-----~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTNLLD-----ELPQSVLKW--APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHH-----TTTHHHHHH--SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHhhcc-----cccHHHHhh--ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111000 001111100 0000223467789999999999999999999999998754
No 155
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=353.51 Aligned_cols=261 Identities=17% Similarity=0.141 Sum_probs=200.1
Q ss_pred cCccccCCceEEEEEEeC---------CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCcc---------------
Q 005749 382 GQVIEKTTYGTAYKAKLA---------DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIP--------------- 437 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~---------~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~--------------- 437 (679)
.+.||+|+||.||+|+.. +++.||+|.+... +.+.+|++++++++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 378999999999999965 3889999998753 57899999999999999988
Q ss_pred ceEEeeCCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005749 438 LRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF 517 (679)
Q Consensus 438 l~~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~ 517 (679)
+++++....+..++||||+ +++|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.+
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETT
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCC
Confidence 5666665467889999999 999999998642 245999999999999999999999988 9999999999999999
Q ss_pred C--ceEEeecccccccCccccc------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCc
Q 005749 518 F--VSRLTEFGLDQLMVPAVAD------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGE 589 (679)
Q Consensus 518 ~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~ 589 (679)
+ .+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 8 9999999999876543211 1133478999999999998899999999999999999999999995433211
Q ss_pred ccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 590 FVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 590 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
..+......... ......+.. ........++.+++.+||+.||++|||++|+++.|+++.....
T Consensus 276 -~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 276 -EDIMKQKQKFVD--KPGPFVGPC------GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp -HHHHHHHHHHHH--SCCCEECTT------SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHhccC--Chhhhhhhc------cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 111111111100 000000000 0000113567789999999999999999999999999875443
No 156
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-39 Score=335.85 Aligned_cols=246 Identities=17% Similarity=0.269 Sum_probs=198.8
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeC---------------C
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG---------------K 445 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~---------------~ 445 (679)
.+.||+|+||.||+|+.. +++.||+|+++.. .+.+.+|++++++++||||+++++++.. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 478999999999999964 7999999998753 3578899999999999999999998753 1
Q ss_pred CCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeec
Q 005749 446 RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEF 525 (679)
Q Consensus 446 ~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 525 (679)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+||
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcc
Confidence 245799999999999999997643 245899999999999999999999988 999999999999999999999999
Q ss_pred ccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccc
Q 005749 526 GLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEET 605 (679)
Q Consensus 526 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 605 (679)
|+++...... ......|++.|+|||.+.+..++.++||||||+++|||++|..|+.. ....... .
T Consensus 167 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--------~~~~~~~-~---- 231 (284)
T 2a19_B 167 GLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--------TSKFFTD-L---- 231 (284)
T ss_dssp TTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--------HHHHHHH-H----
T ss_pred hhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--------HHHHHHH-h----
Confidence 9998764332 22345689999999999988999999999999999999999988621 1111110 0
Q ss_pred ccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 606 TMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 606 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
..+.. .......+.+++.+||+.||++|||+.|+++.|+.+....+
T Consensus 232 ---------~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 232 ---------RDGII--SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ---------HTTCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ---------hcccc--cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11100 01112446689999999999999999999999999876544
No 157
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=342.77 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=194.9
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcc-----cCcccHHHHHHHHhccC---CCCCccceEEeeCCCC----ce
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSC-----KDRSSCLPVIRQLGKVR---HENLIPLRAFYQGKRG----EK 449 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-----~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~----~~ 449 (679)
+.||+|+||+||+|+ ..+++.||||+++.... .....+.+|++++++++ ||||+++++++..... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 789999999999999 46799999999864321 22346788888887775 9999999999876332 47
Q ss_pred EEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccccc
Q 005749 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529 (679)
Q Consensus 450 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 529 (679)
++||||+. |+|.+++.... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 168 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred EEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence 99999997 59999998643 234899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHh--hccccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAV--LEETTM 607 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~--~~~~~~ 607 (679)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+........ ....+.
T Consensus 169 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~ 244 (308)
T 3g33_A 169 IYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGKIFDLIGLPPEDDWP 244 (308)
T ss_dssp TSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSC
T ss_pred ccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChhhcc
Confidence 76432 22345678999999999998999999999999999999999999995533211 1111111110 000000
Q ss_pred ccc---hHhhhhcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 608 EVF---DMEIMKGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 608 ~~~---~~~i~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
... ............ ++....+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 000000000000 1123567789999999999999999999864
No 158
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.8e-40 Score=350.25 Aligned_cols=246 Identities=17% Similarity=0.234 Sum_probs=193.7
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+. .+|+.||||+++... ....+|++++.++ +|||||++++++.+ .+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~~~gg 101 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVTELMKGG 101 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEEeCCCCC
Confidence 47899999999999995 468999999997642 3457899999888 79999999999987 68899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CceEEeecccccccCccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF----FVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~~~~~~ 535 (679)
+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+++......
T Consensus 102 ~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 102 ELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp BHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred cHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999763 45899999999999999999999998 9999999999998543 359999999998764332
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... +.......... . ..
T Consensus 175 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~~~~~i~~~~~-~------~~ 243 (342)
T 2qr7_A 175 -GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE---EILARIGSGKF-S------LS 243 (342)
T ss_dssp -CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH---HHHHHHHHCCC-C------CC
T ss_pred -CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH---HHHHHHccCCc-c------cC
Confidence 2234567899999999998888999999999999999999999999643222111 11111110000 0 00
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. ........++.+++.+||..||++||++.|++++
T Consensus 244 ~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 G---GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp S---TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0011223567789999999999999999999875
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.8e-40 Score=369.41 Aligned_cols=247 Identities=21% Similarity=0.248 Sum_probs=199.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
++||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++|++++|||||++++++.+ .+..++||||+++
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lVmEy~~g 268 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEEEEEcCCC
Confidence 6899999999999995 579999999996532 2344568899999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
|+|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 269 g~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--~ 341 (576)
T 2acx_A 269 GDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--T 341 (576)
T ss_dssp CBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--C
T ss_pred CcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCc--c
Confidence 99999997642 234899999999999999999999988 9999999999999999999999999998764332 2
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ........ +....
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~--------------i~~~~ 405 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERL--------------VKEVP 405 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHH--------------HHHCC
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHH--------------hhccc
Confidence 234589999999999998889999999999999999999999996543221 11111111 11111
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRP-----TMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RP-----s~~evl~~ 653 (679)
........+++.+++.+||+.||++|| +++||+++
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 111122235677899999999999999 78888764
No 160
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-40 Score=350.37 Aligned_cols=255 Identities=20% Similarity=0.322 Sum_probs=201.5
Q ss_pred cCccccCCceEEEEEEeC-CC-----CEEEEEEcccCcc-cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA-DG-----ATIALRLLREGSC-KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~-----~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+.. ++ ..||+|.++.... ...+.+.+|+++++++ +||||+++++++.+ .+..++||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~ 129 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVIT 129 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-CCceEEEE
Confidence 478999999999999953 23 4799999976532 3356789999999999 89999999999987 67899999
Q ss_pred EecCCCChHHHhhcccC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEe
Q 005749 454 DYFPSRTLHDLLHDTIA----------GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLT 523 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 523 (679)
||+++|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEEC
Confidence 99999999999975421 1235899999999999999999999988 9999999999999999999999
Q ss_pred ecccccccCccccc-chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHh
Q 005749 524 EFGLDQLMVPAVAD-EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAV 601 (679)
Q Consensus 524 DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~ 601 (679)
|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||.+..... .......
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~--- 281 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYKLVK--- 281 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHHHHH---
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHHHHh---
Confidence 99999865433221 1223456788999999988899999999999999999998 899985433221 1111111
Q ss_pred hcccccccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 602 LEETTMEVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 602 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+... ........+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 282 --------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 --------------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp --------------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------------cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 11100 011123467789999999999999999999999998753
No 161
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.1e-40 Score=341.00 Aligned_cols=247 Identities=18% Similarity=0.275 Sum_probs=195.6
Q ss_pred CccccCCceEEEEEEe---CCCCEEEEEEcccCccc--CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 383 QVIEKTTYGTAYKAKL---ADGATIALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~---~~~~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~ 100 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAE 100 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEEEECCT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEEEEeCC
Confidence 3899999999999963 34678999999765322 2467899999999999999999999995 467899999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 101 LGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp TEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 99999999863 45899999999999999999999988 999999999999999999999999999876433221
Q ss_pred --chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 538 --EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 538 --~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+.... .+ ... +
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~---~~~--------------~ 233 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EV---TAM--------------L 233 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HH---HHH--------------H
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HH---HHH--------------H
Confidence 1223346788999999988889999999999999999999 99999543221 11 110 0
Q ss_pred hhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 615 MKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 615 ~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
..+.. .........+.+++.+||+.||++||++.|+++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 234 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 111122356778999999999999999999999999874
No 162
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.2e-40 Score=338.31 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=200.0
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEEEEeCC
Confidence 47899999999999995 468899999986532 2234578999999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--- 167 (284)
T 2vgo_A 98 RGELYKELQKH----GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--- 167 (284)
T ss_dssp TEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS---
T ss_pred CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc---
Confidence 99999999764 35899999999999999999999988 999999999999999999999999998765322
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... +...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~--------------~~~~ 227 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT------ETHRR--------------IVNV 227 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH--------------HHTT
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh------HHHHH--------------Hhcc
Confidence 123457899999999999888999999999999999999999999543211 11110 0111
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhhCCCC
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEENRPRN 661 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~~~~~ 661 (679)
.....+.....+.+++.+||+.||++||+++|+++. ++....+.
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~ 273 (284)
T 2vgo_A 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRV 273 (284)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCC
T ss_pred ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcccc
Confidence 111111223466789999999999999999999974 45444333
No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=340.08 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=194.5
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
.+||+|+||.||+|+ ..+++.||||.+........+.+.+|++++++++||||+++++++.. .+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeCCCCCH
Confidence 589999999999999 46789999999987655556789999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCceEEeecccccccCcccccchh
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD-FFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
.+++..... ...+++..+..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++...... ....
T Consensus 107 ~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 181 (295)
T 2clq_A 107 SALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTE 181 (295)
T ss_dssp HHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC------C
T ss_pred HHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-Cccc
Confidence 999976422 345779999999999999999999988 999999999999997 8999999999998764321 1223
Q ss_pred cccccccccccccccccC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 541 ALAKADGYKAPELQRMKK--CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
...|++.|+|||++.+.. ++.++||||||+++|||++|+.||....... ....... .....
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~-------------~~~~~ 244 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVG-------------MFKVH 244 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHH-------------HHCCC
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhc-------------ccccc
Confidence 457899999999987643 8899999999999999999999984321110 0000000 00000
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........++.+++.+||+.||++||+++|+++.
T Consensus 245 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 245 PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01111223567789999999999999999999864
No 164
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7e-40 Score=349.89 Aligned_cols=191 Identities=18% Similarity=0.285 Sum_probs=166.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccC-----CCCCccceEEeeCCCCceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-----HENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
+.||+|+||+||+|+. .+++.||||+++... ...+.+..|++++++++ |||||++++++.. .+..++||||+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~~ 118 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDHMCLIFEPL 118 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTEEEEEECCC
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCeeEEEEcCC
Confidence 7899999999999995 578999999997532 23456788999999986 9999999999987 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--------------------
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD-------------------- 516 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-------------------- 516 (679)
+++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 -GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp -CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred -CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 889999998643 235899999999999999999999988 999999999999975
Q ss_pred -----CCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 005749 517 -----FFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSG 585 (679)
Q Consensus 517 -----~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~ 585 (679)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999865322 23457899999999999999999999999999999999999999653
No 165
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=344.65 Aligned_cols=263 Identities=19% Similarity=0.295 Sum_probs=202.8
Q ss_pred cCccccCCceEEEEEEe-----CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCC-CCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-----ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-RGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-~~~~~lv~ey 455 (679)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ....++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 47899999999999984 46889999999876555566899999999999999999999998763 2368999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 126 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 126 LPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp CTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred CCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 9999999999864 345899999999999999999999988 9999999999999999999999999998764332
Q ss_pred cc--chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccc----c
Q 005749 536 AD--EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTME----V 609 (679)
Q Consensus 536 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~----~ 609 (679)
.. ......++..|+|||.+.+..++.++||||||+++|||++|..|+.... ..+.... ......+ .
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~ 271 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-------AEFMRMI-GNDKQGQMIVFH 271 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-------HHHHHHH-CTTCCTHHHHHH
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH-------HHHHHhh-ccccchhhhHHH
Confidence 21 1223456778999999988889999999999999999999999873210 0000000 0000000 0
Q ss_pred chHhhhhcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 610 FDMEIMKGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 610 ~~~~i~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
+...+..+.+ +.......++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0011111111 112223456788999999999999999999999999875
No 166
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=349.17 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=188.8
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCC--CCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRH--ENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++.+++| |||+++++++.+ .+..++||| +.
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~e-~~ 91 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME-CG 91 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEC-CC
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEEEEe-CC
Confidence 378999999999999988899999999875432 234678999999999986 999999999987 678999999 45
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+|+|.+++... ..+++..++.|+.|++.||+|||+++ |+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 92 NIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp SEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 78999999863 45899999999999999999999988 99999999999997 578999999999876443222
Q ss_pred -chhcccccccccccccccc-----------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccc
Q 005749 538 -EMVALAKADGYKAPELQRM-----------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEET 605 (679)
Q Consensus 538 -~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 605 (679)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~-- 236 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDP-- 236 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCT--
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHhcC--
Confidence 2235579999999999864 6789999999999999999999999954221 11111111100
Q ss_pred ccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 606 TMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 606 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
.... ........++.+++.+||+.||++|||+.|+++..
T Consensus 237 -------~~~~---~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 237 -------NHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp -------TSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------Cccc---CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 0000 00011124567899999999999999999998763
No 167
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-39 Score=343.80 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=200.2
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhc--cCCCCCccceEEeeCCC---CceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGK--VRHENLIPLRAFYQGKR---GEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~---~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.... ...++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 47899999999999998 5899999998653 34567889998887 79999999999998743 2789999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH--------TGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
++|+|.+++.. ..+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 123 ~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 123 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999975 24899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCccccc---chhccccccccccccccccc------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCc
Q 005749 529 QLMVPAVAD---EMVALAKADGYKAPELQRMK------KCSSRTDVYAFGILLLEILIG----------KKPGKSGRNGE 589 (679)
Q Consensus 529 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gvvl~El~tg----------~~p~~~~~~~~ 589 (679)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++| +.||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 865433211 22345789999999998765 234689999999999999999 67775433221
Q ss_pred ccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 590 FVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 590 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
.....+....... .....+... ....+....+.+++.+||+.||++|||+.||++.|+++....
T Consensus 275 -~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQ-KLRPNIPNR------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp -CCHHHHHHHHTTS-CCCCCCCGG------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -ccHHHHHHHHHHH-HhCCCCccc------ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1112222211111 000000000 012245567889999999999999999999999999986544
No 168
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.2e-41 Score=361.79 Aligned_cols=238 Identities=15% Similarity=0.148 Sum_probs=183.8
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc---ccCcccHHHHH---HHHhccCCCCCccce-------EEeeCCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS---CKDRSSCLPVI---RQLGKVRHENLIPLR-------AFYQGKRG 447 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~Ei---~~l~~l~H~nIv~l~-------~~~~~~~~ 447 (679)
.+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+ +++++++|||||+++ +++.+.+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 3789999999999999 4679999999997532 23346788999 555666899999998 66654211
Q ss_pred ----------------ceEEEEEecCCCChHHHhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005749 448 ----------------EKLLIYDYFPSRTLHDLLHDTIA---GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508 (679)
Q Consensus 448 ----------------~~~lv~ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlk 508 (679)
..++||||+ +|+|.+++..... ....+++..++.|+.||+.||+|||+++ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 378999999 6799999986421 1123456888999999999999999998 9999999
Q ss_pred CCCeeecCCCceEEeecccccccCcccccchhccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHh
Q 005749 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMK-----------KCSSRTDVYAFGILLLEILI 577 (679)
Q Consensus 509 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~DV~S~Gvvl~El~t 577 (679)
|+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|||++
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 9999999999999999999986422 2234567 899999999877 89999999999999999999
Q ss_pred CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 578 GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 578 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
|+.||.+....+... .+.... . ...+++.+++.+||+.||++|||+.|+++
T Consensus 309 g~~Pf~~~~~~~~~~--------------------~~~~~~-~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAALGGSE--------------------WIFRSC-K---NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------CCSG--------------------GGGSSC-C---CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCcccccccchh--------------------hhhhhc-c---CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999995433221110 011110 1 11246778999999999999999999986
No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3e-39 Score=332.81 Aligned_cols=251 Identities=18% Similarity=0.297 Sum_probs=197.0
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCccc------CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCK------DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+.. +++.||+|.++..... ..+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeEEEEEe
Confidence 478999999999999964 6999999998754321 24578999999999999999999999987 678999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----ceEEeecccccc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF----VSRLTEFGLDQL 530 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~~ 530 (679)
|+++++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+++.
T Consensus 89 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 89 LVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred ecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 99999999999763 45899999999999999999999988 99999999999999877 899999999987
Q ss_pred cCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVF 610 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (679)
..... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.+.... ....... .. ...+
T Consensus 162 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~--~~~~ 230 (283)
T 3bhy_A 162 IEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETLTNIS-AV--NYDF 230 (283)
T ss_dssp CC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHH-TT--CCCC
T ss_pred ccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHHHHhH-hc--ccCC
Confidence 64322 223456899999999999889999999999999999999999999543211 1111000 00 0000
Q ss_pred hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhhC
Q 005749 611 DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEENR 658 (679)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 658 (679)
..... ......+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 231 ~~~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 231 DEEYF-------SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp CHHHH-------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred cchhc-------ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 11111 1113457789999999999999999999984 45543
No 170
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=348.87 Aligned_cols=247 Identities=12% Similarity=0.163 Sum_probs=196.6
Q ss_pred CccccCCceEEEEEE------eCCCCEEEEEEcccCcccCcccHHHHHHHHhccC---CCCCccceEEeeCCCCceEEEE
Q 005749 383 QVIEKTTYGTAYKAK------LADGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~------~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++.. .+..++||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~~~lv~ 146 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNGSVLVG 146 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSCEEEEE
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCCcEEEE
Confidence 689999999999993 556899999999764 3456788888888886 9999999999987 67899999
Q ss_pred EecCCCChHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----------CCceE
Q 005749 454 DYFPSRTLHDLLHDTIA-GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD-----------FFVSR 521 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-----------~~~~k 521 (679)
|||++|+|.+++..... ....+++..++.|+.||++||+|||+++ |+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999975332 2456999999999999999999999988 999999999999998 89999
Q ss_pred EeecccccccCcc-cccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHH
Q 005749 522 LTEFGLDQLMVPA-VADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVA 600 (679)
Q Consensus 522 l~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~ 600 (679)
|+|||+|+.+... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--------- 294 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK--------- 294 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---------
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---------
Confidence 9999999765321 122334567999999999999999999999999999999999999998433221100
Q ss_pred hhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCC-CCHHHHHHHHHhhCCC
Q 005749 601 VLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVR-PTMDEVVKQLEENRPR 660 (679)
Q Consensus 601 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R-Ps~~evl~~L~~~~~~ 660 (679)
.... ... .+. .....+++..|++.+|.+| |+++++.+.|++....
T Consensus 295 -----~~~~-----~~~--~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -----PEGL-----FRR--LPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -----ECSC-----CTT--CSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----echh-----ccc--cCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0000 011 112 2344468888999999998 6788888888877543
No 171
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-39 Score=360.00 Aligned_cols=189 Identities=19% Similarity=0.292 Sum_probs=148.9
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCC----CCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK----RGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~----~~~~~lv~e 454 (679)
.++||+|+||+||+|+ ..+++.||||++..... ...+.+.+|+++|++++|||||++++++... ....|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 4789999999999999 45799999999865422 2345788999999999999999999998542 256899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+. |+|.+++.. ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 138 IAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred ccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 985 699999976 345999999999999999999999988 999999999999999999999999999876422
Q ss_pred cc--------------------------cchhcccccccccccccc-cccCCCCcchhHHHHHHHHHHHhC
Q 005749 535 VA--------------------------DEMVALAKADGYKAPELQ-RMKKCSSRTDVYAFGILLLEILIG 578 (679)
Q Consensus 535 ~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gvvl~El~tg 578 (679)
.. ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 11 123456789999999976 456799999999999999999993
No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.9e-40 Score=339.73 Aligned_cols=244 Identities=18% Similarity=0.263 Sum_probs=197.8
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcc---cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSC---KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEEEEecCC
Confidence 478999999999999954 588999999865422 234578899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 99 ~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~ 170 (294)
T 2rku_A 99 RRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-E 170 (294)
T ss_dssp TCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-C
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc-c
Confidence 99999998763 45899999999999999999999988 9999999999999999999999999998754321 2
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... +..... ...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~--------------~~~ 230 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRI--------------KKN 230 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHH--------------HTT
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH--------------hhc
Confidence 223457899999999999888999999999999999999999999543211 111100 011
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
...........+.+++.+||+.||++|||++|+++.-
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 231 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0011112234567899999999999999999999853
No 173
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.5e-40 Score=346.73 Aligned_cols=248 Identities=18% Similarity=0.280 Sum_probs=194.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccC-CCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVR-HENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
++.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+.++.+++ ||||+++++++.+ .+..++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~~~~lv~e~~~ 112 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEIILILEYAA 112 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEECCT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CCeEEEEEEecC
Confidence 47899999999999995 4699999999876432 33567899999999994 6999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccccccCcc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 534 (679)
+|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 113 ~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 113 GGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp TEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 999999986532 346899999999999999999999988 999999999999997 789999999999876432
Q ss_pred cccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 535 VADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....... .. .. .
T Consensus 188 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~-~~-~~-~---- 252 (327)
T 3lm5_A 188 --CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQ-VN-VD-Y---- 252 (327)
T ss_dssp --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHH-TC-CC-C----
T ss_pred --cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHh-cc-cc-c----
Confidence 22334579999999999999999999999999999999999999995432211 0000000 00 00 0
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...........+.+++.+||+.||++|||++|+++.
T Consensus 253 ---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 253 ---SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ---CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 001111223567789999999999999999999876
No 174
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.8e-40 Score=353.30 Aligned_cols=245 Identities=16% Similarity=0.175 Sum_probs=189.5
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccC--CCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVR--HENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++.+++ |||||++++++.. .+..++||| +.
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~E-~~ 138 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME-CG 138 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEEE-CC
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEEEe-cC
Confidence 378999999999999988899999999875432 23467899999999996 5999999999987 678999999 56
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++ ++.+||+|||+++.+......
T Consensus 139 ~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 139 NIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp SEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 78999999863 45899999999999999999999988 99999999999996 589999999999876433221
Q ss_pred -chhcccccccccccccccc-----------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccc
Q 005749 538 -EMVALAKADGYKAPELQRM-----------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEET 605 (679)
Q Consensus 538 -~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 605 (679)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~-- 283 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDP-- 283 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHCT--
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhCc--
Confidence 2235579999999998864 4689999999999999999999999954321 11111111100
Q ss_pred ccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 606 TMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 606 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.... ........++.+++.+||+.||++|||+.|+++.
T Consensus 284 -------~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 -------NHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -------TSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------cccC---CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0000 0000112456789999999999999999999875
No 175
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.4e-40 Score=340.49 Aligned_cols=245 Identities=20% Similarity=0.289 Sum_probs=195.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+. .+|+.||+|.++.......+.+.+|++++++++||||+++++++.+ .+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEEcCCCcc
Confidence 47899999999999995 4799999999986554455678999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||++ ++++.+||+|||+++.....
T Consensus 93 L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--- 162 (304)
T 2jam_A 93 LFDRILER----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--- 162 (304)
T ss_dssp HHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---
T ss_pred HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---
Confidence 99998763 35899999999999999999999988 9999999999999 78899999999999865322
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ........ .. .. +.
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~-~~-~~-~~------ 227 (304)
T 2jam_A 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKE-GY-YE-FE------ 227 (304)
T ss_dssp TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHH-CC-CC-CC------
T ss_pred ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHc-CC-CC-CC------
Confidence 223446899999999999889999999999999999999999999543211 11111100 00 00 00
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+........+.+++.+||+.||++|||++|+++.
T Consensus 228 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 -SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00111223567789999999999999999999874
No 176
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.5e-40 Score=346.73 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=197.6
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc---cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC---KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEecCC
Confidence 47899999999999995 4588999999875422 234678899999999999999999999997 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++.+++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 125 ~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~ 196 (335)
T 2owb_A 125 RRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-E 196 (335)
T ss_dssp TCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-C
T ss_pred CCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc-c
Confidence 99999998763 45899999999999999999999988 9999999999999999999999999998764321 2
Q ss_pred chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 538 EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...... +..... ...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~--------------~~~ 256 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRI--------------KKN 256 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHH--------------HHT
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHH--------------hcC
Confidence 223457899999999999888999999999999999999999999543211 111100 011
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...........+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001111123456789999999999999999999975
No 177
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.5e-40 Score=341.79 Aligned_cols=254 Identities=16% Similarity=0.211 Sum_probs=198.0
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeC-CCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQG-KRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+ ..+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 7899999999999995 4799999999975432 334678999999999999999999998753 24678999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH--EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|.+++.........+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~- 170 (279)
T 2w5a_A 92 GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT- 170 (279)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C-
T ss_pred CCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc-
Confidence 9999999865443456999999999999999999999865 2349999999999999999999999999998764321
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ..+ ... +..
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~---~~~--------------i~~ 230 (279)
T 2w5a_A 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KEL---AGK--------------IRE 230 (279)
T ss_dssp HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH---HHH--------------HHH
T ss_pred ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHH---HHH--------------Hhh
Confidence 122345689999999999988899999999999999999999999954321 111 111 111
Q ss_pred cCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhh
Q 005749 617 GIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEEN 657 (679)
Q Consensus 617 ~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~ 657 (679)
+.. ........++.+++.+||+.||++||+++|+++.+...
T Consensus 231 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 231 GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 111 11112235677899999999999999999999876543
No 178
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-39 Score=333.55 Aligned_cols=247 Identities=19% Similarity=0.255 Sum_probs=197.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+ .+..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEEEecCCC
Confidence 47899999999999995 4799999999875432 334678999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc-cc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA-DE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~-~~ 538 (679)
+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 91 ~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 91 ELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp EGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999875 345899999999999999999999988 99999999999999999999999999986533221 12
Q ss_pred hhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc
Q 005749 539 MVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG 617 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 617 (679)
.....|+..|+|||.+.+..+ +.++||||||+++|||++|+.||....... .....+.. .. .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~----~~------------~ 226 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKE----KK------------T 226 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHHHT----TC------------T
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHhhh----cc------------c
Confidence 334578999999999987665 779999999999999999999996543221 11111110 00 0
Q ss_pred CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 618 IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 618 ~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...........+.+++.+||+.||++|||++|+++.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 227 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001111223566789999999999999999999763
No 179
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-39 Score=335.59 Aligned_cols=245 Identities=19% Similarity=0.247 Sum_probs=196.2
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++||||++++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEEEecCCCC
Confidence 6899999999999994 5689999999875432 234568899999999999999999999987 67889999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc---eEEeecccccccCcccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV---SRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~~~ 536 (679)
+|.+.+... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++.......
T Consensus 91 ~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~- 162 (284)
T 3kk8_A 91 ELFEDIVAR----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE- 162 (284)
T ss_dssp BHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-
T ss_pred CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-
Confidence 999988764 45899999999999999999999988 999999999999986655 9999999997664322
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||.+.... ........... ..
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~--~~------- 226 (284)
T 3kk8_A 163 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAY--DY------- 226 (284)
T ss_dssp -BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCC--CC-------
T ss_pred -cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------HHHHHHHhccc--cC-------
Confidence 223457899999999999989999999999999999999999999543211 11111000000 00
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
..+......+++.+++.+||+.||++|||++|+++.
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 -PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000011223567789999999999999999999985
No 180
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1e-39 Score=355.95 Aligned_cols=257 Identities=25% Similarity=0.301 Sum_probs=190.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCC-----CCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-----RGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~~~~lv~ey 455 (679)
.++||+|+||.||+|+. .+|+.||||++... ...+.+|+++|++++|||||+++++|... ....++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 37899999999999996 46999999998653 23345799999999999999999988542 1236799999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CceEEeecccccccCcc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-FVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~ 534 (679)
+++ ++.+.+.........+++..++.++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~ 210 (420)
T 1j1b_A 135 VPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210 (420)
T ss_dssp CCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred ccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence 986 777776643333567999999999999999999999988 9999999999999965 67899999999876432
Q ss_pred cccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh---------cc
Q 005749 535 VADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL---------EE 604 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~---------~~ 604 (679)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+..+++..-. ..
T Consensus 211 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~~~~~ 286 (420)
T 1j1b_A 211 E--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNP 286 (420)
T ss_dssp C--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHHHHCS
T ss_pred C--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhCh
Confidence 2 22345789999999998764 7999999999999999999999999654321 122222221100 00
Q ss_pred cccccchHhhhhcCCCCh-----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 605 TTMEVFDMEIMKGIRSPM-----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 605 ~~~~~~~~~i~~~~~~~~-----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...+...+.+. ..+. +...+++.+++.+||+.||++||++.|++++
T Consensus 287 ~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 287 NYTEFKFPQIK---AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCC---CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhccCccC---CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000000000 0000 1123578899999999999999999999875
No 181
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.6e-40 Score=346.99 Aligned_cols=260 Identities=17% Similarity=0.234 Sum_probs=186.5
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||+||+|+ ..+++.||||+++.... ...+.+.+|++++++++|||||++++++.+ .+..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEEEEecCCC
Confidence 3789999999999999 55799999999975432 234578899999999999999999999987 6889999999985
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----cCCCceEEeecccccccCc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV-----DDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl-----~~~~~~kl~DFGla~~~~~ 533 (679)
+|.+++... ..+++..++.|+.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++....
T Consensus 118 -~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 118 -DLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp -EHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred -CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 999999763 45899999999999999999999988 9999999999999 4556699999999986543
Q ss_pred ccccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHh-hcc-ccccc-
Q 005749 534 AVADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAV-LEE-TTMEV- 609 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~- 609 (679)
. ........||..|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+........ ... .....
T Consensus 190 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 190 P-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--DQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTTTSTTGG
T ss_pred c-ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--HHHHHHHHHhCCCchhhhhhhh
Confidence 2 2223445689999999998864 4899999999999999999999999553221 11111111100 000 00000
Q ss_pred ----chHhhhhcCCCChHH-----HHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 ----FDMEIMKGIRSPMEE-----GLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 ----~~~~i~~~~~~~~~~-----~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.............. ...++.+++.+||+.||++|||++|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000000001111 22567799999999999999999999863
No 182
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-39 Score=351.36 Aligned_cols=259 Identities=19% Similarity=0.256 Sum_probs=191.6
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCC---------------
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK--------------- 445 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~--------------- 445 (679)
.+.||+|+||+||+|+ ..+|+.||||++... .....+|+++++.++|||||++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 3789999999999999 467999999998653 23345899999999999999999998542
Q ss_pred ----------------------CCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 005749 446 ----------------------RGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPIT 503 (679)
Q Consensus 446 ----------------------~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iv 503 (679)
....++||||++ |+|.+.+.........+++..++.++.|+++||+|||+++ |+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i~ 163 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG---IC 163 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EE
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc---Cc
Confidence 223789999998 5888888764433567999999999999999999999988 99
Q ss_pred ecCCCCCCeeec-CCCceEEeecccccccCcccccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCC
Q 005749 504 HGNVRSKNVLVD-DFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKP 581 (679)
Q Consensus 504 HrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p 581 (679)
||||||+|||++ .++.+||+|||+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.|
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 241 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence 999999999998 68999999999998764332 23355789999999988764 489999999999999999999999
Q ss_pred CCCCCCCcccchhHHHHHHhhcccccccc--hHh-----hhhcCCCC-----hHHHHHHHHHHHHhccCcCCCCCCCHHH
Q 005749 582 GKSGRNGEFVDLPSIVKVAVLEETTMEVF--DME-----IMKGIRSP-----MEEGLVQALKLAMGCCAPVASVRPTMDE 649 (679)
Q Consensus 582 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~-----i~~~~~~~-----~~~~~~~~~~l~~~cl~~dP~~RPs~~e 649 (679)
|.+.... ..+...+...- ........ ++. ........ ......++.+++.+||+.||++|||+.|
T Consensus 242 f~~~~~~--~~~~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 242 FSGETSI--DQLVRIIQIMG-TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCCSSHH--HHHHHHHHHHC-CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCChH--HHHHHHHHHhC-CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9654321 11112211110 00000000 000 00000000 0112345789999999999999999999
Q ss_pred HHHH
Q 005749 650 VVKQ 653 (679)
Q Consensus 650 vl~~ 653 (679)
++++
T Consensus 319 ~l~h 322 (383)
T 3eb0_A 319 AMAH 322 (383)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9864
No 183
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-39 Score=346.06 Aligned_cols=263 Identities=21% Similarity=0.301 Sum_probs=195.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCC-------CCceEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-------RGEKLL 451 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-------~~~~~l 451 (679)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++... .+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 37899999999999995 6799999999865532 2345788999999999999999999998763 346899
Q ss_pred EEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccccccc
Q 005749 452 IYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM 531 (679)
Q Consensus 452 v~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 531 (679)
||||+++ +|.+.+... ...+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.+
T Consensus 102 v~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 9999985 788877654 345899999999999999999999988 999999999999999999999999999876
Q ss_pred Cccc---ccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHH--hhccc
Q 005749 532 VPAV---ADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVA--VLEET 605 (679)
Q Consensus 532 ~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~--~~~~~ 605 (679)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. +....... .....
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ--LALISQLCGSITPEV 252 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTT
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChhh
Confidence 4221 122344578999999998875 4589999999999999999999999965332111 11111100 00000
Q ss_pred ccccchHhh------hhcCCCChHHH------HHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 606 TMEVFDMEI------MKGIRSPMEEG------LVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 606 ~~~~~~~~i------~~~~~~~~~~~------~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
....-.... ........... .+.+.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000 00111111222 2457789999999999999999999885
No 184
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8e-40 Score=344.73 Aligned_cols=255 Identities=19% Similarity=0.281 Sum_probs=196.9
Q ss_pred cCccccCCceEEEEEEe------CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL------ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CCCcEEEEe
Confidence 37899999999999984 347799999997542 2345578999999999999999999999987 678899999
Q ss_pred ecCCCChHHHhhcccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccc
Q 005749 455 YFPSRTLHDLLHDTIAG---KPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLD 528 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla 528 (679)
|+++|+|.+++...... ...+++..++.++.|++.||+|||+++ |+||||||+|||++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999865321 245899999999999999999999988 999999999999984 456999999998
Q ss_pred cccCcccc-cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 529 QLMVPAVA-DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 529 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
+....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~---- 260 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTS---- 260 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHT----
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHhc----
Confidence 75432211 12233467889999999988899999999999999999998 99998543211 11111100
Q ss_pred cccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 607 MEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.............+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 261 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 261 ---------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp ---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 00011112223567789999999999999999999999998754
No 185
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=348.28 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=188.8
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCC-----CceEEEEE
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-----GEKLLIYD 454 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-----~~~~lv~e 454 (679)
+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.... ...++|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 6899999999999995 6799999999965422 22456889999999999999999999987632 34699999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+ +++|.+++.. ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 181 (367)
T 1cm8_A 111 FM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181 (367)
T ss_dssp CC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred cC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccccccc
Confidence 99 7899999975 34899999999999999999999988 999999999999999999999999999875322
Q ss_pred cccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--ccccccc--
Q 005749 535 VADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEV-- 609 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-- 609 (679)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+......... .+....+
T Consensus 182 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 182 ----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD--QLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp ----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHTCSC
T ss_pred ----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHHhhh
Confidence 345578999999999876 679999999999999999999999996543211 11111111000 0000000
Q ss_pred -chHhhhhcC----C----CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 -FDMEIMKGI----R----SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 -~~~~i~~~~----~----~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
......... . ...+...+.+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000 0 0011224567899999999999999999999985
No 186
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=353.06 Aligned_cols=275 Identities=20% Similarity=0.298 Sum_probs=187.6
Q ss_pred cHHHHHHhhcCccccCCceEEEEEEeC---CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeC-CCCc
Q 005749 373 TLEDVLNATGQVIEKTTYGTAYKAKLA---DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG-KRGE 448 (679)
Q Consensus 373 ~~~~l~~~~~~~ig~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~ 448 (679)
.+++.....+++||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++.. ....
T Consensus 17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 455665556789999999999999965 57899999997532 34578899999999999999999999853 2567
Q ss_pred eEEEEEecCCCChHHHhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCc
Q 005749 449 KLLIYDYFPSRTLHDLLHDTIA-----GKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV----DDFFV 519 (679)
Q Consensus 449 ~~lv~ey~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~ 519 (679)
.++||||+.+ +|.+++..... ....+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCc
Confidence 8999999975 88888764321 1234899999999999999999999988 9999999999999 77899
Q ss_pred eEEeecccccccCcccc--cchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCc-------
Q 005749 520 SRLTEFGLDQLMVPAVA--DEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGE------- 589 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~------- 589 (679)
+||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.....
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 99999999987643211 22345678999999999886 458999999999999999999999996543311
Q ss_pred ccchhHHHHHHh-hc-ccccccc---h-HhhhhcC-----C-CChHH--------HHHHHHHHHHhccCcCCCCCCCHHH
Q 005749 590 FVDLPSIVKVAV-LE-ETTMEVF---D-MEIMKGI-----R-SPMEE--------GLVQALKLAMGCCAPVASVRPTMDE 649 (679)
Q Consensus 590 ~~~l~~~~~~~~-~~-~~~~~~~---~-~~i~~~~-----~-~~~~~--------~~~~~~~l~~~cl~~dP~~RPs~~e 649 (679)
...+...+...- .. ..+.... + ....... . ..... ....+.+++.+||+.||++|||++|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 011111111100 00 0000000 0 0000000 0 00000 0246778999999999999999999
Q ss_pred HHHH
Q 005749 650 VVKQ 653 (679)
Q Consensus 650 vl~~ 653 (679)
++++
T Consensus 331 ~L~h 334 (405)
T 3rgf_A 331 AMQD 334 (405)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9986
No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.1e-39 Score=337.59 Aligned_cols=244 Identities=18% Similarity=0.276 Sum_probs=198.5
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEEeCCCC
Confidence 37899999999999984 579999999997653 3345779999999999999999999999987 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 106 ~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 176 (303)
T 3a7i_A 106 SALDLLEP-----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR 176 (303)
T ss_dssp EHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCB
T ss_pred cHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-ccc
Confidence 99999864 35899999999999999999999988 9999999999999999999999999998764332 122
Q ss_pred hcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCC
Q 005749 540 VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIR 619 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 619 (679)
....|++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ..... ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~------------~~ 237 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL-IPKNN------------PP 237 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSC------------CC
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHHHH-hhcCC------------CC
Confidence 3457899999999999889999999999999999999999998532211 11110 00000 00
Q ss_pred CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 620 SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 620 ~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
.........+.+++.+||+.||++|||++|+++..
T Consensus 238 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 00111234577899999999999999999999864
No 188
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-39 Score=336.32 Aligned_cols=240 Identities=15% Similarity=0.234 Sum_probs=191.6
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcc--cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSC--KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+..+.++ +||||+++++++.+ .+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 94 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLIQNEYCN 94 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEEEEecC
Confidence 478999999999999954 799999999876432 2345788999999999 99999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-------------------C
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-------------------F 518 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-------------------~ 518 (679)
+|+|.+++.........+++..++.|+.|++.||+|||+++ |+||||||+||+++.+ .
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 99999999865332356899999999999999999999988 9999999999999844 4
Q ss_pred ceEEeecccccccCcccccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHH
Q 005749 519 VSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIV 597 (679)
Q Consensus 519 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~ 597 (679)
.+||+|||.+...... ....||..|+|||.+.+. .+++++|||||||++|||++|.+|+.... .+.
T Consensus 172 ~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~ 238 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------QWH 238 (289)
T ss_dssp CEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------HHH
T ss_pred EEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------HHH
Confidence 7999999999876432 233589999999998765 56789999999999999999998763210 010
Q ss_pred HHHhhcccccccchHhhhhcCCC-ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 598 KVAVLEETTMEVFDMEIMKGIRS-PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 598 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. +..+..+ ........+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~---------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 E---------------IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H---------------HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H---------------HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 0111111 111223567789999999999999999999864
No 189
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.2e-39 Score=374.82 Aligned_cols=242 Identities=18% Similarity=0.245 Sum_probs=198.1
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccC---cccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREG---SCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.++||+|+||.||+|+. .+++.||||+++.. .....+.+..|.+++..+ +||||+++++++.+ .+..|+||||+
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-~~~~~lV~E~~ 424 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFVMEYV 424 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-SSEEEEEEECC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-CCEEEEEEeCc
Confidence 36899999999999994 56889999999753 234456788999999988 79999999999987 67899999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 425 ~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~ 496 (674)
T 3pfq_A 425 NGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-G 496 (674)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCT-T
T ss_pred CCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccC-C
Confidence 999999999864 35899999999999999999999988 999999999999999999999999999864322 2
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.... +... .+..
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~--------------~i~~ 556 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQ--------------SIME 556 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH--------------HHHS
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHH--------------HHHh
Confidence 2344568999999999999999999999999999999999999999543221 1111 1111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTM-----DEVVK 652 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~-----~evl~ 652 (679)
+..........++.+++.+||+.||++||++ +||++
T Consensus 557 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 557 HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp SCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1111122234567889999999999999997 66664
No 190
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7.7e-39 Score=353.44 Aligned_cols=256 Identities=14% Similarity=0.187 Sum_probs=199.3
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+ ..+++.||||++.... ..+++.+|++++..++|++++..+.++....+..++||||+ +++
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 4789999999999999 4679999999876543 34578999999999988665555554444467889999999 889
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCccccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
|.+++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.+......
T Consensus 89 L~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 89 LEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99999753 345999999999999999999999988 9999999999999 68899999999999876443221
Q ss_pred ------chhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 538 ------EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 538 ------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+............+..... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----~~~~- 237 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----ATSI- 237 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH----HSCH-
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc----cccH-
Confidence 12256799999999999999999999999999999999999999966544322211111110000 0000
Q ss_pred HhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhC
Q 005749 612 MEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENR 658 (679)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 658 (679)
..+.. ....++.+++.+||+.||++||++++|++.|+++.
T Consensus 238 ~~l~~-------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 EALCR-------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHHT-------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHhc-------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 01111 11256788999999999999999999999998873
No 191
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.6e-39 Score=343.04 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=194.9
Q ss_pred CccccCCceEEEEEEeC-CCCEEEEEEcccCccc--------CcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEE
Q 005749 383 QVIEKTTYGTAYKAKLA-DGATIALRLLREGSCK--------DRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~--------~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv 452 (679)
+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++.++ +||||+++++++.. .+..++|
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~lv 178 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES-SSFMFLV 178 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB-SSEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee-CCEEEEE
Confidence 78999999999999964 7999999998764321 134678999999999 79999999999987 6889999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccC
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMV 532 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 532 (679)
|||+++++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++..+.
T Consensus 179 ~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp ECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999763 45899999999999999999999988 9999999999999999999999999998764
Q ss_pred cccccchhcccccccccccccccc------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 533 PAVADEMVALAKADGYKAPELQRM------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 533 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 252 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~------- 316 (365)
T 2y7j_A 252 PGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------LMLRM------- 316 (365)
T ss_dssp TTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH-------
T ss_pred CCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH------HHHHH-------
Confidence 332 2345679999999998763 35889999999999999999999999543211 11110
Q ss_pred cccchHhhhhcCCCCh-H---HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 607 MEVFDMEIMKGIRSPM-E---EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~-~---~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..+..... + .....+.+++.+||+.||++|||++|+++.
T Consensus 317 -------i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 -------IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -------HHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------HHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011111111 1 113457789999999999999999999873
No 192
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.5e-39 Score=334.78 Aligned_cols=245 Identities=20% Similarity=0.310 Sum_probs=192.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCC---CCceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK---RGEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~---~~~~~lv~ey~ 456 (679)
+.||+|+||.||+|+. .++..||+|.+.... ....+.+.+|++++++++||||+++++++... ....++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 6799999999999994 568899999987543 23356789999999999999999999988642 35689999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCceEEeecccccccCccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~ 535 (679)
++|+|.+++... ..+++..++.++.|++.||+|||+.+ .+|+||||||+||+++ +++.+||+|||++......
T Consensus 112 ~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~- 185 (290)
T 1t4h_A 112 TSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp CSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred CCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-
Confidence 999999999763 45899999999999999999999875 3599999999999998 7899999999999765332
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
......||+.|+|||++. +.++.++||||+|+++|||++|+.||...... ......... ..... ..
T Consensus 186 --~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~-~~~~~----~~- 251 (290)
T 1t4h_A 186 --FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQIYRRVTS-GVKPA----SF- 251 (290)
T ss_dssp --SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHHHHHHTT-TCCCG----GG-
T ss_pred --ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHHHHHHhc-cCCcc----cc-
Confidence 223456899999999876 46999999999999999999999999543221 111111111 00000 00
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.....+++.+++.+||+.||++|||++|+++.
T Consensus 252 ------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 252 ------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01112467789999999999999999999864
No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-39 Score=333.40 Aligned_cols=242 Identities=19% Similarity=0.310 Sum_probs=188.9
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEEEeccC
Confidence 378999999999999964 79999999986542 2335578899999999999999999999987 678999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 95 GGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp SCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred CCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 99999999764 34899999999999999999999988 9999999999999999999999999998764322
Q ss_pred chhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 538 EMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ...... +..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~--------------~~~ 225 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PTLFKK--------------IRG 225 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH--------------HHH
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHH--------------hhc
Confidence 2234568899999999987765 6899999999999999999999954221 111111 111
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+...........+.+++.+||+.||++|||++|+++.
T Consensus 226 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 226 GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111111123456789999999999999999999985
No 194
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=345.48 Aligned_cols=262 Identities=23% Similarity=0.298 Sum_probs=194.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-----cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-----KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey 455 (679)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-CCceEEEEEc
Confidence 37899999999999995 5699999999975422 123568899999999999999999999987 6789999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++ +|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 94 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 94 MET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp CSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred CCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 986 899888754 345889999999999999999999988 9999999999999999999999999998764322
Q ss_pred ccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccccc--
Q 005749 536 ADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEVF-- 610 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~-- 610 (679)
.......||+.|+|||++.+. .++.++|||||||++|||++|..||.+.... ..+......... ...+.+..
T Consensus 167 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 167 -RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--DQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp -CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred -ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHcCCCChhhhhhhccC
Confidence 223445789999999998754 5899999999999999999999998543221 111111111100 00000000
Q ss_pred -hHhhhhcCCC-Ch----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 611 -DMEIMKGIRS-PM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 611 -~~~i~~~~~~-~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
+......... +. .....++.+++.+||+.||++|||++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 0000000000 00 11235678999999999999999999999863
No 195
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.3e-39 Score=335.84 Aligned_cols=241 Identities=19% Similarity=0.273 Sum_probs=190.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc--------ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS--------CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv 452 (679)
.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.. +..++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--EDYYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--CceEEE
Confidence 47899999999999995 568899999986532 1223568999999999999999999999876 358999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc---eEEeeccccc
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV---SRLTEFGLDQ 529 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~ 529 (679)
|||+++++|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++. +||+|||+++
T Consensus 93 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 93 LELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred EecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 999999999999875 345899999999999999999999988 999999999999987654 9999999998
Q ss_pred ccCcccccchhccccccccccccccc---ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 530 LMVPAVADEMVALAKADGYKAPELQR---MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 530 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+...+
T Consensus 166 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~--------- 232 (322)
T 2ycf_A 166 ILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI--------- 232 (322)
T ss_dssp ECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHH---------
T ss_pred ecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHH---------
Confidence 76432 1223456899999999864 4678999999999999999999999995433221 111111
Q ss_pred cccchHhhhhcCCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 607 MEVFDMEIMKGIRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
..+.....+ .....+.+++.+||+.||++||+++|+++
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 --------TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --------HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --------HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111111111 12356778999999999999999999985
No 196
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.2e-39 Score=358.97 Aligned_cols=245 Identities=20% Similarity=0.290 Sum_probs=195.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+ .+..++|||||++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEEEEcCCC
Confidence 47899999999999995 479999999986532 2345678999999999999999999999997 6889999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCceEEeecccccccCccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD---DFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~~~~~ 535 (679)
|+|.+.+... ..+++..++.|+.|++.||+|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 177 (486)
T 3mwu_A 106 GELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177 (486)
T ss_dssp CBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-
Confidence 9999988764 35899999999999999999999988 99999999999995 4567999999999876433
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.... ............ ++
T Consensus 178 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~---~~---- 242 (486)
T 3mwu_A 178 -TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYA---FD---- 242 (486)
T ss_dssp -----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCC---SC----
T ss_pred -CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC---CC----
Confidence 22345679999999999875 5999999999999999999999999543221 111111000000 00
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+......+++.+++.+||+.||++|||+.|+++.
T Consensus 243 ---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 ---LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00111223567789999999999999999999986
No 197
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.6e-39 Score=352.94 Aligned_cols=193 Identities=18% Similarity=0.294 Sum_probs=161.1
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCC----CceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR----GEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~----~~~~lv~e 454 (679)
.+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++|||||++++++.... ...|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 3789999999999999 45688999999975422 23467899999999999999999999987632 57899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+. |+|.+++.. ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 111 IAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred cCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 996 599999976 345999999999999999999999998 999999999999999999999999999876432
Q ss_pred cc---------------------cchhcccccccccccccc-cccCCCCcchhHHHHHHHHHHHhCCCCC
Q 005749 535 VA---------------------DEMVALAKADGYKAPELQ-RMKKCSSRTDVYAFGILLLEILIGKKPG 582 (679)
Q Consensus 535 ~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gvvl~El~tg~~p~ 582 (679)
.. .......||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 21 123566899999999986 4567999999999999999999865554
No 198
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.1e-39 Score=371.71 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=197.8
Q ss_pred cCccccCCceEEEEEEeCC----CCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLAD----GATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~ 456 (679)
.+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++|||||++++++.+ +..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--NPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--CceEEEEEcC
Confidence 4789999999999998642 45799999876432 234678999999999999999999999854 5789999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 473 ~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 473 TLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp TTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred CCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999764 345899999999999999999999988 99999999999999999999999999987754433
Q ss_pred cchhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 537 DEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... +.... +.
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~~~--------------i~ 606 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGR--------------IE 606 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHH--------------HH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHHHH--------------HH
Confidence 33334567789999999998899999999999999999997 99998543221 11111 11
Q ss_pred hcCC-CChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCC
Q 005749 616 KGIR-SPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRP 659 (679)
Q Consensus 616 ~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 659 (679)
.+.+ +..+...+.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 607 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 607 NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1111 1112223567789999999999999999999999998753
No 199
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-39 Score=338.39 Aligned_cols=246 Identities=17% Similarity=0.256 Sum_probs=191.0
Q ss_pred CccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.. .+..++||||+++++|
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEECCTTEEH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEeCCCCcH
Confidence 67999999999999964 589999999987666667789999999999999999999999987 6789999999999999
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhc
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVA 541 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 541 (679)
.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ......
T Consensus 104 ~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 176 (302)
T 2j7t_A 104 DAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKRDS 176 (302)
T ss_dssp HHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC---
T ss_pred HHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-cccccc
Confidence 9998754 345899999999999999999999988 999999999999999999999999987643211 112234
Q ss_pred ccccccccccccc-----cccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhh
Q 005749 542 LAKADGYKAPELQ-----RMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMK 616 (679)
Q Consensus 542 ~~gt~~y~aPE~~-----~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 616 (679)
..|+..|+|||++ ....++.++||||||+++|||++|+.||...... .......... ....
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~------- 242 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKSD-PPTL------- 242 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCC-------
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhccC-Cccc-------
Confidence 5789999999987 3567899999999999999999999998543211 1111110000 0000
Q ss_pred cCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 617 GIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........+.+++.+||+.||++|||+.|+++.
T Consensus 243 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 ---LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ---SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ---CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0111223467789999999999999999999763
No 200
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.8e-39 Score=345.77 Aligned_cols=259 Identities=16% Similarity=0.187 Sum_probs=186.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCC-----CceEEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-----GEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-----~~~~lv~ 453 (679)
.+.||+|+||.||+|+ ..+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ...++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 3789999999999999 45689999999975422 23456889999999999999999999987632 2689999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
||+++ +|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 110 ELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp ECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 99975 78888853 3889999999999999999999988 99999999999999999999999999986533
Q ss_pred ccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHH---------------
Q 005749 534 AVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVK--------------- 598 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~--------------- 598 (679)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+.....
T Consensus 180 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 180 S--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID--QWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHC-CCCCCHHHHTTSCH
T ss_pred c--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHHhhh
Confidence 2 12334578999999999999899999999999999999999999996543211 0000000
Q ss_pred ---HHhhcccc--cccchHhhhhcCCC----ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 599 ---VAVLEETT--MEVFDMEIMKGIRS----PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 599 ---~~~~~~~~--~~~~~~~i~~~~~~----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
........ ...+.........+ .......++.+++.+||+.||++|||++|+++.-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00000000 00000000000000 0112246788999999999999999999999863
No 201
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.5e-40 Score=349.72 Aligned_cols=259 Identities=15% Similarity=0.246 Sum_probs=196.7
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+ .+..++||||+++|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEECCCTTCB
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEECCCCCC
Confidence 6899999999999995 478999999997642 2334678999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 118 L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 187 (360)
T 3eqc_A 118 LDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 187 (360)
T ss_dssp HHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C-
T ss_pred HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc---cc
Confidence 99999864 3589999999999999999999985 6 999999999999999999999999998755322 22
Q ss_pred hcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHH----------------------
Q 005749 540 VALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIV---------------------- 597 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~---------------------- 597 (679)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+........
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 3457899999999999999999999999999999999999999653321100000000
Q ss_pred -HHHhhcccccccchHhhhhcCCCC--hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 598 -KVAVLEETTMEVFDMEIMKGIRSP--MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 598 -~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
..........+..+.. ....... ......++.+++.+||+.||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------CCCHHHHHHHH-HHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCCCcccchhhhhHH-hccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000000111111 1111111 11123567889999999999999999999875
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.8e-39 Score=360.84 Aligned_cols=245 Identities=20% Similarity=0.324 Sum_probs=197.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFP 457 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~ 457 (679)
.++||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+ .+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEEecCC
Confidence 47899999999999995 479999999986543 2345678999999999999999999999997 688999999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCceEEeecccccccCcc
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV---DDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~ 534 (679)
+|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 110 ~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 110 GGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp SCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 99999998763 45899999999999999999999988 9999999999999 56789999999999876433
Q ss_pred cccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 535 VADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.... .+...+. ...... .
T Consensus 183 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~---~~~~~~---~--- 247 (484)
T 3nyv_A 183 --KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKKVE---KGKYTF---E--- 247 (484)
T ss_dssp --CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH---HCCCCC---C---
T ss_pred --cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHH---cCCCCC---C---
Confidence 23345579999999999875 6999999999999999999999999543221 1111110 000000 0
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+......+.+.+++.+||+.||++|||++|++++
T Consensus 248 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 ----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00111223567789999999999999999999975
No 203
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.8e-40 Score=345.48 Aligned_cols=259 Identities=22% Similarity=0.331 Sum_probs=192.0
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCccc--CcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK--DRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++.+ .+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEEecCCc
Confidence 37899999999999995 45999999998654322 23457899999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 109 ~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 180 (331)
T 4aaa_A 109 TILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EV 180 (331)
T ss_dssp EHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred chHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc-cc
Confidence 999888764 245899999999999999999999988 9999999999999999999999999998654321 22
Q ss_pred hhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHH----------hh-cccc
Q 005749 539 MVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVA----------VL-EETT 606 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~----------~~-~~~~ 606 (679)
.....|+..|+|||++.+. .++.++||||+||++|||++|+.||......+ .+....... +. ....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhcccc
Confidence 3345789999999998865 68999999999999999999999995543211 111111100 00 0000
Q ss_pred cccchHhhhhcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 607 MEVFDMEIMKGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.....+.+.. ..+. +.....+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKE--REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSS--CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccc--cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 0011 1123567899999999999999999999875
No 204
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.5e-39 Score=358.47 Aligned_cols=245 Identities=20% Similarity=0.320 Sum_probs=191.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||+||+|+. .++..||+|+++... ....+.+.+|+++++.++|||||+++++|.+ .+..++|||||++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEecCCC
Confidence 47899999999999995 478999999997653 2345678999999999999999999999997 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CceEEeecccccccCccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF---FVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~ 535 (679)
|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.. +.+||+|||+++.....
T Consensus 121 g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~- 192 (494)
T 3lij_A 121 GELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ- 192 (494)
T ss_dssp CBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence 9999988764 45899999999999999999999988 9999999999999764 55999999999876433
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
.......||+.|+|||++. ..++.++||||+||++|||++|+.||.+.... ........... . ++.
T Consensus 193 -~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~--~-~~~--- 258 (494)
T 3lij_A 193 -KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EILRKVEKGKY--T-FDS--- 258 (494)
T ss_dssp -BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCC--C-CCS---
T ss_pred -ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC--C-CCc---
Confidence 2234567999999999886 56999999999999999999999999543221 11111100000 0 000
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+......+.+.+++.+||+.||++|||+.|++++
T Consensus 259 ----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 ----PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ----GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0011223567789999999999999999999865
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=334.08 Aligned_cols=246 Identities=17% Similarity=0.274 Sum_probs=192.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCc----ccCcccHHHHHHHHhccCCCCCccceEEeeC-CCCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGS----CKDRSSCLPVIRQLGKVRHENLIPLRAFYQG-KRGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-~~~~~~lv~ey 455 (679)
.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ..+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 47899999999999995 568999999997542 2335678999999999999999999999853 24578999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
++++ |.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp CSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred ccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 9876 777776543 345899999999999999999999988 9999999999999999999999999998764321
Q ss_pred -ccchhcccccccccccccccccC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 536 -ADEMVALAKADGYKAPELQRMKK--CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 536 -~~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
........|+..|+|||++.+.. ++.++||||||+++|||++|+.||.+... ......
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~------------- 224 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------YKLFEN------------- 224 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH-------------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------HHHHHH-------------
Confidence 12223456899999999987644 37799999999999999999999954221 111111
Q ss_pred hhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 613 EIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..+...........+.+++.+||+.||++|||++|+++.
T Consensus 225 -i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 225 -IGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -HHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -HhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111111223566789999999999999999999975
No 206
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.6e-39 Score=336.12 Aligned_cols=254 Identities=18% Similarity=0.278 Sum_probs=190.5
Q ss_pred cCccccCCceEEEEEEeC--CCC--EEEEEEcccCc---ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA--DGA--TIALRLLREGS---CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~--~~~--~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||+||+|+.. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CCceeeEe
Confidence 378999999999999853 333 68999987642 2234678999999999999999999999986 34899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 101 LAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp CCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred cccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 99999999999764 245899999999999999999999988 999999999999999999999999999876433
Q ss_pred ccc--chhcccccccccccccccccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhcccccccch
Q 005749 535 VAD--EMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFD 611 (679)
Q Consensus 535 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (679)
... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+.... ...........
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~------ 242 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGE------ 242 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCC------
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCC------
Confidence 221 1233457788999999988889999999999999999999 99999543211 11111111000
Q ss_pred HhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCC
Q 005749 612 MEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRN 661 (679)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 661 (679)
..+.......++.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 243 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 243 ------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 00111122356778999999999999999999999999987543
No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.8e-39 Score=356.97 Aligned_cols=241 Identities=20% Similarity=0.289 Sum_probs=193.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-------------cCcccHHHHHHHHhccCCCCCccceEEeeCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-------------KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRG 447 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-------------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 447 (679)
.+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|++++++++|||||++++++.+ .+
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED-KK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CC
Confidence 37899999999999995 5688999999875421 224568899999999999999999999997 68
Q ss_pred ceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---ceEEee
Q 005749 448 EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF---VSRLTE 524 (679)
Q Consensus 448 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 524 (679)
..++|||||++|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 899999999999999998764 45899999999999999999999988 99999999999998775 699999
Q ss_pred cccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc
Q 005749 525 FGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE 604 (679)
Q Consensus 525 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~ 604 (679)
||+++..... .......||+.|+|||++. +.++.++||||+||++|||++|+.||.+.... .....
T Consensus 193 fg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~----- 258 (504)
T 3q5i_A 193 FGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKK----- 258 (504)
T ss_dssp CTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH-----
T ss_pred CCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-----
Confidence 9999876433 2234567999999999987 56899999999999999999999999543221 11111
Q ss_pred cccccchHhhhhcCCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 605 TTMEVFDMEIMKGIRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 605 ~~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..+...... ....++.+++.+||+.||++|||++|+++.
T Consensus 259 ---------i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 ---------VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ---------HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111111111 123567889999999999999999999875
No 208
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.3e-39 Score=352.78 Aligned_cols=193 Identities=20% Similarity=0.274 Sum_probs=165.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhcc------CCCCCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKV------RHENLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l------~H~nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++.+ +|+||+++++++.. .+..++|||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e 179 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHICMTFE 179 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEEEEEC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEEEEEe
Confidence 37899999999999984 568999999997532 2245678888888877 57799999999987 688999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc--eEEeecccccccC
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV--SRLTEFGLDQLMV 532 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~ 532 (679)
|+. ++|.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++. +||+|||+++...
T Consensus 180 ~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 180 LLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp CCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred ccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 996 59999987643 244899999999999999999999988 999999999999999887 9999999997643
Q ss_pred cccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 005749 533 PAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGR 586 (679)
Q Consensus 533 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~ 586 (679)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 254 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 254 Q----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp C----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 2 2334578999999999999999999999999999999999999996543
No 209
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.8e-39 Score=343.99 Aligned_cols=247 Identities=20% Similarity=0.315 Sum_probs=192.2
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHH-HhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQ-LGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||.||+|+. .+|+.||||+++.... .....+..|+.+ ++.++||||+++++++.. .+..++||||+++
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~~- 134 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICMELMDT- 134 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-SSCEEEEECCCSE-
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-CCcEEEEHHHhhC-
Confidence 6799999999999994 6799999999976432 223456666665 778899999999999987 6789999999975
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
+|.+++.........+++..++.|+.||+.||+|||++ + |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 135 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~ 209 (340)
T 3an0_A 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--VA 209 (340)
T ss_dssp EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--HH
T ss_pred cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceecccc--cc
Confidence 99998875433345799999999999999999999986 7 999999999999999999999999999876432 12
Q ss_pred hhccccccccccccccc----ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 539 MVALAKADGYKAPELQR----MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~----~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||...... . ...........
T Consensus 210 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~----~~~~~~~~~~~--------- 275 (340)
T 3an0_A 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-F----QQLKQVVEEPS--------- 275 (340)
T ss_dssp HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-H----HHHHHHHHSCC---------
T ss_pred cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-H----HHHHHHhcCCC---------
Confidence 23357999999999964 346899999999999999999999999542211 0 11111111000
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...+......++.+++.+||+.||++||++.|+++.
T Consensus 276 ---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 ---PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---CCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 001111223567889999999999999999999874
No 210
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.6e-39 Score=341.76 Aligned_cols=259 Identities=19% Similarity=0.257 Sum_probs=195.0
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCC----CceEEEEEec
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR----GEKLLIYDYF 456 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~----~~~~lv~ey~ 456 (679)
+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++.+++||||+++++++.... ...++||||+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~ 112 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence 7899999999999994 5788999999975432 23467889999999999999999999987532 4689999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
. |+|.+++.. ..+++..++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 113 ~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 183 (364)
T 3qyz_A 113 E-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183 (364)
T ss_dssp S-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred C-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCCCCC
Confidence 7 499999875 34899999999999999999999988 99999999999999999999999999987643322
Q ss_pred c--chhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccc---ccccc
Q 005749 537 D--EMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEET---TMEVF 610 (679)
Q Consensus 537 ~--~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~ 610 (679)
. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. +..... ...... .....
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~i~~-~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ--LNHILG-ILGSPSQEDLNCII 260 (364)
T ss_dssp BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH--HHHHHH-HHCSCCHHHHHTCC
T ss_pred ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH--HHHHHH-HhCCCCHHHHHHhh
Confidence 1 1244579999999998654 4589999999999999999999999965433221 111111 000000 00000
Q ss_pred h---Hhh----hhcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 611 D---MEI----MKGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 611 ~---~~i----~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+ ... ......+. +....++.+++.+||+.||++|||++|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000 00000001 1123567899999999999999999999875
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.4e-38 Score=333.65 Aligned_cols=256 Identities=19% Similarity=0.276 Sum_probs=194.6
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCCccceEEeeCC-CCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENLIPLRAFYQGK-RGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~-~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+ ..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+. ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 3789999999999998 567999999998753 3567899999999997 99999999999863 4568999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-ceEEeecccccccCccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF-VSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~ 537 (679)
++|.+++.. +++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+++......
T Consensus 118 ~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-- 185 (330)
T 3nsz_A 118 TDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 185 (330)
T ss_dssp CCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--
T ss_pred hhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--
Confidence 999999853 789999999999999999999988 99999999999999776 89999999998764332
Q ss_pred chhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc----------cc
Q 005749 538 EMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE----------TT 606 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~----------~~ 606 (679)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+.......-... ..
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKYNIEL 264 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHhcccc
Confidence 2334578899999999876 67899999999999999999999999543221 111111111110000 00
Q ss_pred cccchHhhhhc--------C-CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 607 MEVFDMEIMKG--------I-RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 607 ~~~~~~~i~~~--------~-~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...+....... . ........+++.+++.+||+.||++|||++|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000000 0 00011124677899999999999999999999874
No 212
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-39 Score=336.58 Aligned_cols=247 Identities=20% Similarity=0.315 Sum_probs=180.2
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cC-cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KD-RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||.||+|+. .+|+.||+|+++.... .. .+.+..+...++.++||||+++++++.+ .+..++||||+++
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~~- 90 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICMELMDT- 90 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEEECCSE-
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEEehhcc-
Confidence 7899999999999994 6799999999976422 11 2234444555788899999999999997 6789999999974
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
+|.+++.........+++..++.|+.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...... .
T Consensus 91 ~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 165 (290)
T 3fme_A 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV--A 165 (290)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccccc--c
Confidence 99888875433356799999999999999999999997 7 9999999999999999999999999998764332 2
Q ss_pred hhcccccccccccccc----cccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhh
Q 005749 539 MVALAKADGYKAPELQ----RMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEI 614 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~----~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 614 (679)
.....||+.|+|||.+ .+..++.++||||||+++|||++|+.||...... . ...........
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~----~~~~~~~~~~~--------- 231 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-F----QQLKQVVEEPS--------- 231 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-H----HHHHHHHHSCC---------
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-H----HHHHHHhccCC---------
Confidence 2334689999999996 4567899999999999999999999999542211 1 11111111000
Q ss_pred hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 615 MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...+......++.+++.+||+.||++|||+.|+++.
T Consensus 232 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 232 ---PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 001111223567789999999999999999999873
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=339.46 Aligned_cols=253 Identities=25% Similarity=0.298 Sum_probs=192.4
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+..+ .||+|+++... ....+.+.+|++++++++||||+++++++.+ .+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEeecccCC
Confidence 4899999999999999753 59999987543 2345678899999999999999999999997 67899999999999
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc----
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV---- 535 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~---- 535 (679)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||+++......
T Consensus 115 ~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 115 TLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp EHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 999999764 345899999999999999999999988 99999999999998 6799999999987653211
Q ss_pred ccchhcccccccccccccccc---------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 536 ADEMVALAKADGYKAPELQRM---------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
........|+..|+|||.+.. ..++.++||||||+++|||++|+.||...... ...... .....
T Consensus 188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~-~~~~~ 260 (319)
T 2y4i_B 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AIIWQM-GTGMK 260 (319)
T ss_dssp CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------HHHHHH-HTTCC
T ss_pred ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHh-ccCCC
Confidence 112233468899999998864 35788999999999999999999999543211 111110 00000
Q ss_pred cccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCC
Q 005749 607 MEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNR 662 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 662 (679)
. . ........++.+++.+||+.||++|||++|+++.|+++....+
T Consensus 261 ~-----~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 261 P-----N------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp C-----C------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred C-----C------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 0 0000112356789999999999999999999999999876543
No 214
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-38 Score=345.02 Aligned_cols=261 Identities=15% Similarity=0.206 Sum_probs=196.4
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcccCcccHHHHHHHHhccC--------CCCCccceEEeeC---CCCce
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCKDRSSCLPVIRQLGKVR--------HENLIPLRAFYQG---KRGEK 449 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~--------H~nIv~l~~~~~~---~~~~~ 449 (679)
.+.||+|+||+||+|+ ..+++.||||+++... ...+.+.+|++++++++ |+||+++++++.. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 3789999999999998 5668999999997532 23467889999999986 7889999998872 24578
Q ss_pred EEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCC----------
Q 005749 450 LLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFF---------- 518 (679)
Q Consensus 450 ~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~---------- 518 (679)
++||||+ +++|.+.+.... ...+++..++.|+.||+.||+|||++ + |+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 9999999 557766665432 24589999999999999999999997 7 99999999999999775
Q ss_pred ---------------------------------------ceEEeecccccccCcccccchhcccccccccccccccccCC
Q 005749 519 ---------------------------------------VSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKC 559 (679)
Q Consensus 519 ---------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 559 (679)
.+||+|||+++..... .....||+.|+|||++.+..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCC
Confidence 7999999999876432 234578999999999999899
Q ss_pred CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cc----------cccccchH---------------
Q 005749 560 SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EE----------TTMEVFDM--------------- 612 (679)
Q Consensus 560 ~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~----------~~~~~~~~--------------- 612 (679)
+.++|||||||++|||++|+.||......+...-......... .. ...+.+..
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 9999999999999999999999966544332211111111100 00 00000000
Q ss_pred -hhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 613 -EIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 613 -~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
................+.+++.+||+.||++|||++|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00111112234556778899999999999999999999863
No 215
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.9e-39 Score=349.44 Aligned_cols=264 Identities=20% Similarity=0.285 Sum_probs=191.3
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCC-----CceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKR-----GEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~-----~~~~lv~ey~ 456 (679)
.++||+|+||+||+|+..++..||+|++.... ....+|+++++.++|||||+++++|.... ...++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 37899999999999998777779999886532 23347999999999999999999986422 2378999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCceEEeecccccccCccc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~ 535 (679)
+++ +.+.+.........+++..++.++.|+++||+|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 121 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 121 PET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp SEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred Ccc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 874 44444332222456999999999999999999999988 99999999999999 78999999999998764332
Q ss_pred ccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhc-ccccccchHh
Q 005749 536 ADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLE-ETTMEVFDME 613 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~ 613 (679)
......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... ..+....+..-.. ........+.
T Consensus 197 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~~~~~~~~~ 272 (394)
T 4e7w_A 197 --PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--DQLVEIIKVLGTPSREQIKTMNPN 272 (394)
T ss_dssp --CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCGG
T ss_pred --CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhChh
Confidence 22355789999999988754 5899999999999999999999999654321 1122221110000 0000000000
Q ss_pred hhh-----cCCCChH-----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhh
Q 005749 614 IMK-----GIRSPME-----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEEN 657 (679)
Q Consensus 614 i~~-----~~~~~~~-----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 657 (679)
... ....+.. ...+++.+++.+||+.||++|||+.|++++ ++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 000 0000111 123578899999999999999999999875 4444
No 216
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.7e-39 Score=342.51 Aligned_cols=257 Identities=13% Similarity=0.192 Sum_probs=196.4
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCc-----------------ccHHHHHHHHhccCCCCCccceEEeeC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDR-----------------SSCLPVIRQLGKVRHENLIPLRAFYQG 444 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~-----------------~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 444 (679)
.+.||+|+||.||+|+. +|+.||||++........ +.+.+|++++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 37899999999999999 899999999875422111 678999999999999999999999998
Q ss_pred CCCceEEEEEecCCCChHHH------hhcccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCC
Q 005749 445 KRGEKLLIYDYFPSRTLHDL------LHDTIAGKPVLNWARRHKIALGIARGLAYLHT-GHEIPITHGNVRSKNVLVDDF 517 (679)
Q Consensus 445 ~~~~~~lv~ey~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivHrDlkp~NILl~~~ 517 (679)
.+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ ++ |+||||||+||+++.+
T Consensus 115 -~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 115 -YDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKN 188 (348)
T ss_dssp -SSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECTT
T ss_pred -CCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcCC
Confidence 6789999999999999998 54321 3569999999999999999999998 77 9999999999999999
Q ss_pred CceEEeecccccccCcccccchhccccccccccccccccc-CCCC-cchhHHHHHHHHHHHhCCCCCCCCCCCcccchhH
Q 005749 518 FVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMK-KCSS-RTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPS 595 (679)
Q Consensus 518 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~ 595 (679)
+.+||+|||+++..... ......|+..|+|||.+.+. .++. ++||||||+++|||++|+.||...... ..
T Consensus 189 ~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~ 260 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VE 260 (348)
T ss_dssp SCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HH
T ss_pred CcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HH
Confidence 99999999999875432 23455789999999999876 5666 999999999999999999999654331 11
Q ss_pred HHHHHhhcccccc-----cchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 596 IVKVAVLEETTME-----VFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 596 ~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
............. ...+................+.+++.+||+.||++|||++|+++.
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111000000 000000000000002223567789999999999999999999874
No 217
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=334.35 Aligned_cols=245 Identities=16% Similarity=0.244 Sum_probs=193.7
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+.||+|+||.||+|+.. +|+.||+|.+... ...+.+.+|++++.+++||||+++++++.. .+..++||||+++++
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 110 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEYCGAGS 110 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCTTEE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeecCCCCC
Confidence 368999999999999954 5999999999764 245678999999999999999999999987 678999999999999
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccchh
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMV 540 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 540 (679)
|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ....
T Consensus 111 L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~ 183 (314)
T 3com_A 111 VSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AKRN 183 (314)
T ss_dssp HHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SCBC
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cccC
Confidence 99999743 345899999999999999999999988 9999999999999999999999999997664322 2233
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCC
Q 005749 541 ALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRS 620 (679)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 620 (679)
...|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ...... ........ .
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~~----------~ 246 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMI-PTNPPPTF----------R 246 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-HHSCCCCC----------S
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHH-hcCCCccc----------C
Confidence 457899999999999888999999999999999999999999542211 111000 00000000 0
Q ss_pred ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 621 PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 621 ~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 247 KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011123567789999999999999999999874
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-39 Score=349.23 Aligned_cols=249 Identities=10% Similarity=-0.034 Sum_probs=175.3
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc---cCcccHHHHHHHHhcc--CCCCCccce-------EEeeCCC--
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC---KDRSSCLPVIRQLGKV--RHENLIPLR-------AFYQGKR-- 446 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l--~H~nIv~l~-------~~~~~~~-- 446 (679)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++..+ +|||||+++ +++....
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 47899999999999994 5799999999987542 2344677785544444 699988754 4443211
Q ss_pred --------------CceEEEEEecCCCChHHHhhcccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeeecC
Q 005749 447 --------------GEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARR------HKIALGIARGLAYLHTGHEIPITHGN 506 (679)
Q Consensus 447 --------------~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~gL~~LH~~~~~~ivHrD 506 (679)
...++|||||+ |+|.+++.... ..+.+..+ +.++.||++||+|||+++ |+|||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHrD 219 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGH 219 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEETT
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccCc
Confidence 34799999999 89999998642 23455556 788899999999999988 99999
Q ss_pred CCCCCeeecCCCceEEeecccccccCcccccchhcccccccccccccccc--cCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 005749 507 VRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRM--KKCSSRTDVYAFGILLLEILIGKKPGKS 584 (679)
Q Consensus 507 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gvvl~El~tg~~p~~~ 584 (679)
|||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999998663221 13456699999999987 7799999999999999999999999965
Q ss_pred CCCCcccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 585 GRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 585 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
......... ............. ..+..+.....+.+++.+||+.||++|||+.|+++
T Consensus 296 ~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 296 VTPGIKGSW--------KRPSLRVPGTDSL---AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CCTTCTTCC--------CBCCTTSCCCCSC---CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cCcccccch--------hhhhhhhcccccc---chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 533211100 0000000000000 00111122356778999999999999999999975
No 219
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.2e-39 Score=334.15 Aligned_cols=258 Identities=16% Similarity=0.268 Sum_probs=178.4
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
.+.||+|+||.||+|+ ..+++.||||.+.... ....+.+.+|++++.+++||||+++++++.. .+..++||||++++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEehhccCC
Confidence 3789999999999999 4578999999987543 2345678899999999999999999999987 67899999999999
Q ss_pred ChHHHhhccc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 460 TLHDLLHDTI----AGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 460 sL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+|.+++.... .....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999987421 11345899999999999999999999988 9999999999999999999999999987654321
Q ss_pred c----cchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccc
Q 005749 536 A----DEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVF 610 (679)
Q Consensus 536 ~----~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (679)
. .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ......... .....
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~ 248 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQND-PPSLE 248 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSS-CCCTT
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccC-CCccc
Confidence 1 11234568999999999875 568999999999999999999999995533211 111111110 00000
Q ss_pred hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 611 DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. .... .........++.+++.+||+.||++|||+.|+++.
T Consensus 249 ~-~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 249 T-GVQD--KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp C--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-cccc--chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 0000 00001122467789999999999999999999874
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.8e-39 Score=344.15 Aligned_cols=256 Identities=18% Similarity=0.281 Sum_probs=177.3
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCC-----CCceEEEEE
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK-----RGEKLLIYD 454 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~-----~~~~~lv~e 454 (679)
+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|+++++.++||||+++++++... ....++|+|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 789999999999999 56799999999975422 2345788999999999999999999998752 246799999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+ +++|.+++.. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~- 184 (367)
T 2fst_X 115 LM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD- 184 (367)
T ss_dssp CC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----------
T ss_pred cc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccccc-
Confidence 99 6799998864 35899999999999999999999988 99999999999999999999999999986532
Q ss_pred cccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccccch
Q 005749 535 VADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEVFD 611 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~ 611 (679)
......||..|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+.......-. .+....+..
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 185 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHTTCCC
T ss_pred ---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHHhhh
Confidence 2345678999999999876 678999999999999999999999996543211 11111111000 000000000
Q ss_pred ---HhhhhcC----CCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 612 ---MEIMKGI----RSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 612 ---~~i~~~~----~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
....... ..... ...+.+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000 00111 113567899999999999999999999875
No 221
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.3e-39 Score=341.46 Aligned_cols=259 Identities=18% Similarity=0.236 Sum_probs=187.1
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccC-----------cccHHHHHHHHhccCCCCCccceEEeeCC----CC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKD-----------RSSCLPVIRQLGKVRHENLIPLRAFYQGK----RG 447 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~----~~ 447 (679)
+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||+++++++... ..
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 6899999999999998889999999986543221 15689999999999999999999998542 33
Q ss_pred ceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeeccc
Q 005749 448 EKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGL 527 (679)
Q Consensus 448 ~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 527 (679)
..++||||++ |+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred eEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEecCc
Confidence 6799999998 5898888753 346899999999999999999999988 99999999999999999999999999
Q ss_pred ccccCcccccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 528 DQLMVPAVADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 528 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
++..... .......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+....... .....
T Consensus 181 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~-~~~~~ 255 (362)
T 3pg1_A 181 AREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN--QLNKIVEVV-GTPKI 255 (362)
T ss_dssp -----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHH-CCCCH
T ss_pred ccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHc-CCCCh
Confidence 9854332 22334578899999998876 678999999999999999999999996543211 111111100 00000
Q ss_pred cc-------cchHhhhh---cCCC-C----hHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 607 ME-------VFDMEIMK---GIRS-P----MEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 607 ~~-------~~~~~i~~---~~~~-~----~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.. .....+.. .... . .+...+.+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 00 00000000 0000 0 01123567789999999999999999999875
No 222
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.6e-38 Score=339.15 Aligned_cols=261 Identities=13% Similarity=0.205 Sum_probs=194.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccC-----------CCCCccceEEeeCCC---
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-----------HENLIPLRAFYQGKR--- 446 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nIv~l~~~~~~~~--- 446 (679)
.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++....
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 37899999999999994 679999999997532 23456889999999886 899999999987521
Q ss_pred CceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeec------CCCc
Q 005749 447 GEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVD------DFFV 519 (679)
Q Consensus 447 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~------~~~~ 519 (679)
...++||||+ +++|.+++.... ...+++..++.|+.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 2689999999 889999998643 24489999999999999999999997 7 99999999999994 4458
Q ss_pred eEEeecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHH
Q 005749 520 SRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKV 599 (679)
Q Consensus 520 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~ 599 (679)
+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 177 ~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 252 (373)
T 1q8y_A 177 IKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252 (373)
T ss_dssp EEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred EEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH
Confidence 999999999866432 2345789999999999998999999999999999999999999965433221111111110
Q ss_pred Hhh-cccccc-----------cc----------------hHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHH
Q 005749 600 AVL-EETTME-----------VF----------------DMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVV 651 (679)
Q Consensus 600 ~~~-~~~~~~-----------~~----------------~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl 651 (679)
... ...... .+ ...+.............++.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 332 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHh
Confidence 000 000000 00 00111112223345667888999999999999999999999
Q ss_pred HH
Q 005749 652 KQ 653 (679)
Q Consensus 652 ~~ 653 (679)
+.
T Consensus 333 ~h 334 (373)
T 1q8y_A 333 NH 334 (373)
T ss_dssp TC
T ss_pred hC
Confidence 85
No 223
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.6e-38 Score=328.51 Aligned_cols=261 Identities=18% Similarity=0.249 Sum_probs=193.9
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++||||+++++++.. .+..++||||+. +
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECCS-E
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEEEccc-C
Confidence 6899999999999995 4799999999875432 334678999999999999999999999987 678999999998 5
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccch
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEM 539 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 539 (679)
+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 87 ~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 160 (299)
T 2r3i_A 87 DLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTY 160 (299)
T ss_dssp EHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCT
T ss_pred CHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-ccc
Confidence 9999997643 245899999999999999999999988 9999999999999999999999999987653321 222
Q ss_pred hcccccccccccccccccC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh-cc-ccc-----ccch
Q 005749 540 VALAKADGYKAPELQRMKK-CSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL-EE-TTM-----EVFD 611 (679)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~-~~-~~~-----~~~~ 611 (679)
....+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||.+.... ..+......... .. ... ..+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 3456899999999988755 799999999999999999999999553221 111111111000 00 000 0000
Q ss_pred HhhhhcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 612 MEIMKGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 612 ~~i~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.......... +....++.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 1123567789999999999999999999873
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-38 Score=338.72 Aligned_cols=268 Identities=19% Similarity=0.281 Sum_probs=185.5
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCCCC------ceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRG------EKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~------~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+|+.||||++... ......+.+|++.+..++|||||++++++..... ..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 47899999999999995 56999999998653 2334567888899999999999999999865211 2789999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeeecC-CCceEEeeccccccc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH--TGHEIPITHGNVRSKNVLVDD-FFVSRLTEFGLDQLM 531 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH--~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~ 531 (679)
|+++ +|.+.+.........+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 107 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp CCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred cccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 9986 666555543333566899999999999999999999 777 999999999999997 899999999999876
Q ss_pred Ccccccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc-cc---
Q 005749 532 VPAVADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE-TT--- 606 (679)
Q Consensus 532 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~-~~--- 606 (679)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+..+.+...... ..
T Consensus 183 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 183 SPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp CTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHH
T ss_pred CCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHHHHHHHcCCCCHHHHHh
Confidence 4332 22345789999999988654 4899999999999999999999999653321 11111111100000 00
Q ss_pred --cccchHhhhhcC--------CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHhhC
Q 005749 607 --MEVFDMEIMKGI--------RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ--LEENR 658 (679)
Q Consensus 607 --~~~~~~~i~~~~--------~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 658 (679)
....+....... .........++.+++.+||+.||++|||+.|++++ +++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 000000000000 00111234678899999999999999999999976 45543
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=333.69 Aligned_cols=258 Identities=16% Similarity=0.262 Sum_probs=186.9
Q ss_pred CccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeC-------------CCCc
Q 005749 383 QVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQG-------------KRGE 448 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-------------~~~~ 448 (679)
+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.. ....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence 78999999999999954 589999999976554556788999999999999999999998743 1357
Q ss_pred eEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCceEEeeccc
Q 005749 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGL 527 (679)
Q Consensus 449 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl 527 (679)
.++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++ +++.+||+|||+
T Consensus 97 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Dfg~ 167 (320)
T 2i6l_A 97 VYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGL 167 (320)
T ss_dssp EEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred eeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccCcc
Confidence 899999998 599999864 35899999999999999999999988 99999999999997 567999999999
Q ss_pred ccccCcccc--cchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc
Q 005749 528 DQLMVPAVA--DEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE 604 (679)
Q Consensus 528 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~ 604 (679)
++....... .......++..|+|||.+.. ..++.++||||||+++|||++|+.||.+....+ .+..... .....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~~~-~~~~~ 244 (320)
T 2i6l_A 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE--QMQLILE-SIPVV 244 (320)
T ss_dssp CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HSCCC
T ss_pred ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-hcCCC
Confidence 987643211 11234467889999998765 678999999999999999999999996543211 1111110 00000
Q ss_pred ----------cccccchHhhhhcCCCChH----HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 605 ----------TTMEVFDMEIMKGIRSPME----EGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 605 ----------~~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.......... .....+.. ....++.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDM-TEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHT-TSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccc-cCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000000 00001111 123567889999999999999999999874
No 226
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-38 Score=329.29 Aligned_cols=246 Identities=18% Similarity=0.283 Sum_probs=195.1
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc---------cCcccHHHHHHHHhccC-CCCCccceEEeeCCCCceE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC---------KDRSSCLPVIRQLGKVR-HENLIPLRAFYQGKRGEKL 450 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---------~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~ 450 (679)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++ ||||+++++++.. .+..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-~~~~~ 100 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-NTFFF 100 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc-CCeEE
Confidence 37899999999999995 4689999999975431 12356789999999996 9999999999987 68899
Q ss_pred EEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 451 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 101 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 999999999999999863 45899999999999999999999988 99999999999999999999999999987
Q ss_pred cCcccccchhccccccccccccccc------ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQR------MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE 604 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~ 604 (679)
..... ......+++.|+|||++. ...++.++||||||+++|||++|+.||...... ..........
T Consensus 174 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~ 245 (298)
T 1phk_A 174 LDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM------LMLRMIMSGN 245 (298)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC
T ss_pred cCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH------HHHHHHhcCC
Confidence 64322 223457899999999875 456889999999999999999999999543211 1111110000
Q ss_pred cccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 605 TTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 605 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. .. ..+........+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~--~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 246 Y--QF--------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp C--CC--------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred c--cc--------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0 00 001112234567789999999999999999999863
No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=334.36 Aligned_cols=247 Identities=19% Similarity=0.291 Sum_probs=188.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCC-----CCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGK-----RGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~-----~~~~~lv~e 454 (679)
.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.++ +||||+++++++... .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 37899999999999995 579999999987543 3456789999999999 899999999998753 357899999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcc
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPA 534 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 534 (679)
|+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 108 ~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred cCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 999999999998643 245899999999999999999999988 999999999999999999999999999875432
Q ss_pred cccchhccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 535 VADEMVALAKADGYKAPELQR-----MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 535 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
. .......|++.|+|||++. ...++.++|||||||++|||++|+.||.+.... ...... .......
T Consensus 183 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~- 253 (326)
T 2x7f_A 183 V-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLI-PRNPAPR- 253 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-HHSCCCC-
T ss_pred c-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHh-hcCcccc-
Confidence 1 1223457899999999986 567899999999999999999999999443211 000000 0000000
Q ss_pred chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 ~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.........+.+++.+||..||++||+++|+++.
T Consensus 254 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 254 ----------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ----------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ----------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0011123467789999999999999999999884
No 228
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.8e-38 Score=339.03 Aligned_cols=255 Identities=19% Similarity=0.270 Sum_probs=189.2
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCCc------eEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE------KLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~------~~lv 452 (679)
.+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|++++++++||||+++++++... +. .++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA-SSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC-SSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc-CCcccceeEEEE
Confidence 3789999999999999 45799999999976432 2246788999999999999999999999863 33 3999
Q ss_pred EEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccC
Q 005749 453 YDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMV 532 (679)
Q Consensus 453 ~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 532 (679)
|||+. ++|.+++.. .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 ~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred Ecccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99997 588888743 3899999999999999999999988 9999999999999999999999999998653
Q ss_pred cccccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhc--ccccc-
Q 005749 533 PAVADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLE--ETTME- 608 (679)
Q Consensus 533 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~--~~~~~- 608 (679)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+.......-.. +....
T Consensus 196 ~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 196 A----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD--QLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCHHHHTTC
T ss_pred c----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCcHHHHHHh
Confidence 2 2334578999999999886 678999999999999999999999996533211 111111100000 00000
Q ss_pred --c----chHhhhhcCCCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 609 --V----FDMEIMKGIRSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 609 --~----~~~~i~~~~~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. +...+........ +...+.+.+++.+||+.||++|||++|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000000111 1124577899999999999999999999876
No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.3e-38 Score=334.42 Aligned_cols=256 Identities=15% Similarity=0.263 Sum_probs=195.4
Q ss_pred CccccCCceEEEEEEe--CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCC------CccceEEeeCCCCceEEEEE
Q 005749 383 QVIEKTTYGTAYKAKL--ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHEN------LIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~--~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~~~~lv~e 454 (679)
+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++.++|+| |+++++++.. .+..++|||
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e 97 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHICIVFE 97 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEEEEEEE
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcEEEEEc
Confidence 7899999999999985 368899999997532 23467889999999997765 9999999987 679999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC------------------
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD------------------ 516 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~------------------ 516 (679)
|+ +++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T 1z57_A 98 LL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171 (339)
T ss_dssp CC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred CC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccccccc
Confidence 99 889999997642 245899999999999999999999988 999999999999987
Q ss_pred -CCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhH
Q 005749 517 -FFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPS 595 (679)
Q Consensus 517 -~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~ 595 (679)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~ 244 (339)
T 1z57_A 172 INPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL---A 244 (339)
T ss_dssp SCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH---H
T ss_pred cCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH---H
Confidence 668999999999864322 23457899999999999889999999999999999999999999654322111 1
Q ss_pred HHHHHhhc--------ccccccch-------------Hhh------hhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHH
Q 005749 596 IVKVAVLE--------ETTMEVFD-------------MEI------MKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMD 648 (679)
Q Consensus 596 ~~~~~~~~--------~~~~~~~~-------------~~i------~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~ 648 (679)
.+...... ......+. ..+ ............+++.+++.+||+.||++|||++
T Consensus 245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 324 (339)
T 1z57_A 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324 (339)
T ss_dssp HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence 11110000 00000000 000 0000111234456788999999999999999999
Q ss_pred HHHHH
Q 005749 649 EVVKQ 653 (679)
Q Consensus 649 evl~~ 653 (679)
|+++.
T Consensus 325 ell~h 329 (339)
T 1z57_A 325 EALKH 329 (339)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99864
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.8e-38 Score=332.46 Aligned_cols=262 Identities=18% Similarity=0.258 Sum_probs=195.6
Q ss_pred cCccccCCceEEEEEEe--CCCCEEEEEEcccCcc--cCcccHHHHHHHHhcc---CCCCCccceEEeeC----CCCceE
Q 005749 382 GQVIEKTTYGTAYKAKL--ADGATIALRLLREGSC--KDRSSCLPVIRQLGKV---RHENLIPLRAFYQG----KRGEKL 450 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~--~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~----~~~~~~ 450 (679)
.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+++++.+ +||||+++++++.. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 37899999999999996 4688999999875432 2345788899888777 89999999999872 246789
Q ss_pred EEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 451 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
+||||+. |+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 9999998 59999997643 234899999999999999999999988 99999999999999999999999999987
Q ss_pred cCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTME 608 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~ 608 (679)
.... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+......... ......
T Consensus 170 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 170 YSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD--QLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCGGGSCT
T ss_pred ccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCcccCcc
Confidence 6432 22345678999999999998899999999999999999999999996543211 11111111000 000000
Q ss_pred cc---hHhhhhcCCC----ChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 609 VF---DMEIMKGIRS----PMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 609 ~~---~~~i~~~~~~----~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.. .......... ..+.....+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 0000000000 001123456789999999999999999999964
No 231
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4e-38 Score=325.36 Aligned_cols=245 Identities=20% Similarity=0.297 Sum_probs=193.7
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEEEEEccCC
Confidence 478999999999999954 79999999986543 2345678999999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CceEEeecccccccCccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF---FVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~ 535 (679)
++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.+ +.+||+|||+++......
T Consensus 106 ~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 106 GELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999988763 35899999999999999999999988 9999999999999754 479999999998654322
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
......+++.|+|||.+.+ .++.++||||||+++|||++|+.||.+.... ........... . ++.
T Consensus 179 --~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~-~--~~~--- 243 (287)
T 2wei_A 179 --KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKY-A--FDL--- 243 (287)
T ss_dssp --SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCC-C--CCS---
T ss_pred --ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCC-C--CCc---
Confidence 1233457889999998875 5899999999999999999999999543211 11111100000 0 000
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+.......++.+++.+||+.||++|||+.|+++.
T Consensus 244 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 244 ----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0001223567789999999999999999999984
No 232
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.8e-38 Score=344.98 Aligned_cols=248 Identities=20% Similarity=0.234 Sum_probs=182.4
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+ .+..++|||||. |+
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS-EE
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC-CC
Confidence 3789999999998777778999999998653 234678999999987 89999999999987 678999999996 69
Q ss_pred hHHHhhcccCCCCC---CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-------------CceEEee
Q 005749 461 LHDLLHDTIAGKPV---LNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDF-------------FVSRLTE 524 (679)
Q Consensus 461 L~~~l~~~~~~~~~---l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~D 524 (679)
|.+++......... .++..++.|+.||+.||+|||+++ |+||||||+|||++.+ +.+||+|
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 99999864321111 133356789999999999999988 9999999999999754 4899999
Q ss_pred cccccccCccccc---chhcccccccccccccccc-------cCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccch
Q 005749 525 FGLDQLMVPAVAD---EMVALAKADGYKAPELQRM-------KKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDL 593 (679)
Q Consensus 525 FGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l 593 (679)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.+....+
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---- 247 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---- 247 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----
Confidence 9999876543221 1234579999999999865 568999999999999999998 999984432110
Q ss_pred hHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 594 PSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
..+..... .... . ..........++.+++.+||+.||++|||+.||++
T Consensus 248 ~~i~~~~~---~~~~------~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIF---SLDE------M--KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCC---CCCC------C--TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCC---Cccc------c--cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111000 0000 0 00112344567889999999999999999999986
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.2e-37 Score=329.42 Aligned_cols=260 Identities=19% Similarity=0.272 Sum_probs=192.2
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCC----CCceEEEEEe
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGK----RGEKLLIYDY 455 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~----~~~~~lv~ey 455 (679)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++... ....++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 37899999999999995 4689999999975432 2345678999999999999999999988753 2678999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+. |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 96 ~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 96 MQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 97 599999875 34899999999999999999999988 9999999999999999999999999998764321
Q ss_pred cc---------chhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc-
Q 005749 536 AD---------EMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE- 604 (679)
Q Consensus 536 ~~---------~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~- 604 (679)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.+....+ .+..... .....
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~-~~~~~~ 243 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH--QLLLIFG-IIGTPH 243 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHH-HHCCCC
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHH-HhCCCc
Confidence 11 1223578999999998764 678999999999999999999999996543211 0111110 00000
Q ss_pred ---cccccchH---hhhhcC----CCCh----HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 605 ---TTMEVFDM---EIMKGI----RSPM----EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 605 ---~~~~~~~~---~i~~~~----~~~~----~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
........ ...... .... +...+++.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 000000 0000 1223567789999999999999999999874
No 234
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.1e-38 Score=331.66 Aligned_cols=235 Identities=19% Similarity=0.329 Sum_probs=191.7
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCccc------CcccHHHHHHHHhccC--CCCCccceEEeeCCCCceEEE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSCK------DRSSCLPVIRQLGKVR--HENLIPLRAFYQGKRGEKLLI 452 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~lv 452 (679)
.+.||+|+||.||+|+ ..+++.||||+++..... ..+.+.+|++++++++ |+||+++++++.. .+..++|
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~-~~~~~lv 126 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-PDSFVLI 126 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-SSEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-CCcEEEE
Confidence 3789999999999998 567899999999764322 3457889999999996 5999999999997 6789999
Q ss_pred EEecCC-CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCceEEeecccccc
Q 005749 453 YDYFPS-RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGLDQL 530 (679)
Q Consensus 453 ~ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~ 530 (679)
|||+.+ ++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++ +++.+||+|||+++.
T Consensus 127 ~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 127 LERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 999976 8999999763 45899999999999999999999988 99999999999999 789999999999987
Q ss_pred cCcccccchhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ...
T Consensus 200 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~~------------ 256 (320)
T 3a99_A 200 LKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EII------------ 256 (320)
T ss_dssp CCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHH------------
T ss_pred cccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------hhh------------
Confidence 6432 2234568999999999886665 678999999999999999999984310 000
Q ss_pred chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 610 FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 610 ~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+..........++.+++.+||+.||++|||++|+++.
T Consensus 257 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 257 ------RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------HCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------cccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000011122456789999999999999999999874
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=335.39 Aligned_cols=256 Identities=18% Similarity=0.269 Sum_probs=189.5
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc--cCcccHHHHHHHHhccCCCCCccceEEeeCCCC-----ceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC--KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRG-----EKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~-----~~~lv~ 453 (679)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++..... ..++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 37899999999999995 5699999999976432 224578899999999999999999999986322 359999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
||+. ++|.+++.. .+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 109 e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp ECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred cccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9997 588887743 3899999999999999999999988 99999999999999999999999999986532
Q ss_pred ccccchhcccccccccccccccc-cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhh--cccccccc
Q 005749 534 AVADEMVALAKADGYKAPELQRM-KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVL--EETTMEVF 610 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ 610 (679)
. .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+.......-. .+......
T Consensus 179 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 179 E----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD--QLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH--HHHHHHHHHCBCCHHHHTTCS
T ss_pred C----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHHHh
Confidence 2 234578999999998876 678999999999999999999999996533211 11111110000 00000000
Q ss_pred h---Hhhhhc--------CCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 611 D---MEIMKG--------IRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 611 ~---~~i~~~--------~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+ ...... .....+....++.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 000000 001112334677889999999999999999999875
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.1e-38 Score=327.01 Aligned_cols=247 Identities=19% Similarity=0.304 Sum_probs=184.9
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCccceEEeeCC------------CCc
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLIPLRAFYQGK------------RGE 448 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~------------~~~ 448 (679)
.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++||||+++++++.+. .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 47899999999999995 57999999998653 23346789999999999999999999987642 346
Q ss_pred eEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccc
Q 005749 449 KLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLD 528 (679)
Q Consensus 449 ~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 528 (679)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 79999999999999999753 345788999999999999999999988 999999999999999999999999999
Q ss_pred cccCccc-------------ccchhccccccccccccccccc-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchh
Q 005749 529 QLMVPAV-------------ADEMVALAKADGYKAPELQRMK-KCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLP 594 (679)
Q Consensus 529 ~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~ 594 (679)
+...... ........|+..|+|||++.+. .++.++|||||||++|||++ ||... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~~~~ 235 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----MERV 235 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----hhHH
Confidence 8754221 1122345688999999998754 68999999999999999998 54211 0111
Q ss_pred HHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 595 SIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
...... ... ...+. . .........+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~-~~~--~~~~~----~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKL-RSV--SIEFP----P---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHH-HST--TCCCC----T---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhc-ccc--ccccC----c---cccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111110 000 00000 0 0111223456789999999999999999999874
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.8e-38 Score=336.92 Aligned_cols=194 Identities=19% Similarity=0.308 Sum_probs=162.8
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CC-----CCccceEEeeCCCCceEEEEE
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HE-----NLIPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nIv~l~~~~~~~~~~~~lv~e 454 (679)
.+.||+|+||+||+|+. .+++.||||+++... ...+++.+|++++..++ |+ +|+++++++.. .+..++|||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e 136 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFE 136 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEEEEE
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEEEEe
Confidence 37899999999999994 468899999997532 22456778899988885 44 49999999987 689999999
Q ss_pred ecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCceEEeecccccccC
Q 005749 455 YFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD--DFFVSRLTEFGLDQLMV 532 (679)
Q Consensus 455 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla~~~~ 532 (679)
|++ |+|.+++.... ...+++..++.++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||+++...
T Consensus 137 ~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 137 MLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp CCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred cCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 996 49999998643 23589999999999999999999963 13499999999999994 57889999999998763
Q ss_pred cccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 005749 533 PAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSG 585 (679)
Q Consensus 533 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~ 585 (679)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 213 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 213 QR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32 23457899999999999989999999999999999999999999654
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=328.49 Aligned_cols=235 Identities=20% Similarity=0.378 Sum_probs=187.5
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc------cCcccHHHHHHHHhcc----CCCCCccceEEeeCCCCceE
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC------KDRSSCLPVIRQLGKV----RHENLIPLRAFYQGKRGEKL 450 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~------~~~~~~~~Ei~~l~~l----~H~nIv~l~~~~~~~~~~~~ 450 (679)
.+.||+|+||.||+|+ ..+++.||||+++.... .....+.+|++++.++ +||||+++++++.. .+..+
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-~~~~~ 114 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET-QEGFM 114 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------CE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec-CCeEE
Confidence 4789999999999998 46789999999975432 2345678899999999 89999999999987 67889
Q ss_pred EEEEe-cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCceEEeecccc
Q 005749 451 LIYDY-FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVD-DFFVSRLTEFGLD 528 (679)
Q Consensus 451 lv~ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla 528 (679)
+|||| +.+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++ +++.+||+|||++
T Consensus 115 ~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 99999 7899999999863 35899999999999999999999988 99999999999999 8899999999999
Q ss_pred cccCcccccchhcccccccccccccccccCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhccccc
Q 005749 529 QLMVPAVADEMVALAKADGYKAPELQRMKKC-SSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTM 607 (679)
Q Consensus 529 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (679)
+..... ......|+..|+|||++.+..+ +.++||||||+++|||++|+.||.... ...
T Consensus 188 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~---------- 246 (312)
T 2iwi_A 188 ALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EIL---------- 246 (312)
T ss_dssp EECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHH----------
T ss_pred hhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------HHh----------
Confidence 876433 2234568999999999876665 458999999999999999999984210 000
Q ss_pred ccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 608 EVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 608 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.............+.+++.+||+.||++|||++|+++.
T Consensus 247 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 --------EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --------HTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------hhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001111223456789999999999999999999875
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.9e-38 Score=332.46 Aligned_cols=247 Identities=17% Similarity=0.220 Sum_probs=168.2
Q ss_pred cCccccCCceEEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHH-HHhccCCCCCccceEEeeCC---CCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIR-QLGKVRHENLIPLRAFYQGK---RGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~---~~~~~lv~ey~ 456 (679)
+++||+|+||.||+|+.. +|+.||||++... ....+|+. .+..++||||+++++++... ....++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 467999999999999954 7999999998652 22333433 45667999999999998751 33579999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccccccCc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~ 533 (679)
++|+|.+++.... ...+++.+++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++....
T Consensus 109 ~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 109 EGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp TTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 9999999998643 346999999999999999999999988 999999999999976 45599999999986542
Q ss_pred ccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 534 AVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
. ......+|+.|+|||++.+..++.++||||||+++|||++|+.||........... ... .....
T Consensus 184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~---------~~~~~ 248 (336)
T 3fhr_A 184 N---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG---MKR---------RIRLG 248 (336)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------------
T ss_pred c---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh---HHH---------hhhcc
Confidence 2 22345689999999999888899999999999999999999999955432211000 000 00000
Q ss_pred hhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 614 IMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 614 i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
......+.......++.+++.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000001111234567789999999999999999999985
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.1e-38 Score=331.56 Aligned_cols=251 Identities=19% Similarity=0.246 Sum_probs=172.7
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcc-cCcccHHHHHH-HHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSC-KDRSSCLPVIR-QLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+. .+|+.||||+++.... .....+..|+. +++.++||||+++++++.. .+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~e~~~~ 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMELMST 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEECCCSE
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEEeecCC
Confidence 37899999999999995 5799999999976432 23345666666 6777899999999999987 6789999999985
Q ss_pred CChHHHhhccc-CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCceEEeecccccccCcccc
Q 005749 459 RTLHDLLHDTI-AGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVA 536 (679)
Q Consensus 459 gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 536 (679)
+|.+++.... .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 180 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI- 180 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccc-
Confidence 8888776321 1135689999999999999999999997 7 9999999999999999999999999998764322
Q ss_pred cchhcccccccccccccc----cccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 537 DEMVALAKADGYKAPELQ----RMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 537 ~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... ..+ .. . .....+
T Consensus 181 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~--------~~-~-~~~~~~ 248 (327)
T 3aln_A 181 -AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQL--------TQ-V-VKGDPP 248 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------CC-C-CCSCCC
T ss_pred -ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHH--------HH-H-hcCCCC
Confidence 12334689999999998 45678999999999999999999999995432110 000 00 0 000000
Q ss_pred hhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 613 EIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
.+.. .........+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 249 QLSN---SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCC---CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCC---cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000 0011223567789999999999999999999774
No 241
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8.5e-38 Score=327.06 Aligned_cols=245 Identities=16% Similarity=0.188 Sum_probs=187.3
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcc--cCcccHHHHHHHHhccC--CCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSC--KDRSSCLPVIRQLGKVR--HENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++.+++ ||||+++++++.. .+..++||| +.+
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~e-~~~ 111 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVME-CGN 111 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEEEEEC-CCS
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEEEEEe-cCC
Confidence 78999999999999988899999999975432 23467899999999997 5999999999987 678999999 567
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc-
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD- 537 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~- 537 (679)
++|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+||++++ +.+||+|||+++........
T Consensus 112 ~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 112 IDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 8999999863 45899999999999999999999988 999999999999975 89999999999876433221
Q ss_pred chhcccccccccccccccc-----------cCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccc
Q 005749 538 EMVALAKADGYKAPELQRM-----------KKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETT 606 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (679)
......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..........
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~--- 255 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDP--- 255 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHCT---
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHHHHhc---
Confidence 1234568999999999865 46888999999999999999999999543211 1111111100
Q ss_pred cccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 005749 607 MEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQL 654 (679)
Q Consensus 607 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L 654 (679)
.... ........++.+++.+||+.||++||+++|+++.-
T Consensus 256 ------~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 256 ------NHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp ------TSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ------cccc---CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 0000 00011124567899999999999999999999764
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=341.04 Aligned_cols=243 Identities=17% Similarity=0.209 Sum_probs=181.3
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.++||+|+||+||.....+++.||||++... ..+.+.+|+++++++ +|||||++++++.+ ....++|||||. |+
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEECCS-EE
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEECCC-CC
Confidence 3789999999976655668999999998653 345678999999999 79999999999987 678999999996 59
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCceEEeecccccccCccc
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD-----FFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~~~~~~~ 535 (679)
|.+++.... ..+.+..++.++.||+.||+|||+++ |+||||||+|||++. ...+||+|||+++......
T Consensus 104 L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 104 LQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp HHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred HHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 999998643 23445566789999999999999988 999999999999943 3468899999998764332
Q ss_pred c--cchhccccccccccccccc---ccCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCcccchhHHHHHHhhccccccc
Q 005749 536 A--DEMVALAKADGYKAPELQR---MKKCSSRTDVYAFGILLLEILI-GKKPGKSGRNGEFVDLPSIVKVAVLEETTMEV 609 (679)
Q Consensus 536 ~--~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gvvl~El~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 609 (679)
. .......||+.|+|||++. ...++.++|||||||++|||++ |..||...... .......... ..
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~~~~-~~- 248 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLGACS-LD- 248 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTTCCC-CT-
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhccCC-cc-
Confidence 1 2234567999999999987 4567889999999999999999 88898432111 1111110000 00
Q ss_pred chHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 610 FDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 610 ~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
...+.......+.+++.+||+.||++|||++||++
T Consensus 249 --------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 --------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00111223445678999999999999999999984
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8e-38 Score=332.60 Aligned_cols=257 Identities=17% Similarity=0.249 Sum_probs=192.9
Q ss_pred cCccccCCceEEEEEEeC-CC-CEEEEEEcccCcccCcccHHHHHHHHhccCCCC------CccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLA-DG-ATIALRLLREGSCKDRSSCLPVIRQLGKVRHEN------LIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~-~~-~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~~~~lv~ 453 (679)
.+.||+|+||.||+|+.. ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+++++.. .+..++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~lv~ 101 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHMCIAF 101 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeEEEEE
Confidence 378999999999999953 44 689999997532 23467889999999998776 8899998887 67899999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-------------------
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLV------------------- 514 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl------------------- 514 (679)
||+ ++++.+++.... ...+++..++.|+.||+.||+|||+++ |+||||||+|||+
T Consensus 102 e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 102 ELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred ecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 999 567777776532 245899999999999999999999988 9999999999999
Q ss_pred cCCCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchh
Q 005749 515 DDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLP 594 (679)
Q Consensus 515 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~ 594 (679)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--- 248 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL--- 248 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---
T ss_pred cCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence 67789999999999864322 23457899999999999889999999999999999999999999654322111
Q ss_pred HHHHHHhhc--------cccccc------------chHh-hh------hcCCCChHHHHHHHHHHHHhccCcCCCCCCCH
Q 005749 595 SIVKVAVLE--------ETTMEV------------FDME-IM------KGIRSPMEEGLVQALKLAMGCCAPVASVRPTM 647 (679)
Q Consensus 595 ~~~~~~~~~--------~~~~~~------------~~~~-i~------~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~ 647 (679)
..+...... ...... .+.. .. ............++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 111110000 000000 0000 00 00011122345678899999999999999999
Q ss_pred HHHHHH
Q 005749 648 DEVVKQ 653 (679)
Q Consensus 648 ~evl~~ 653 (679)
+|+++.
T Consensus 329 ~e~l~h 334 (355)
T 2eu9_A 329 AEALLH 334 (355)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999864
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.2e-37 Score=320.86 Aligned_cols=246 Identities=18% Similarity=0.247 Sum_probs=171.4
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCccc-C-cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCK-D-RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
.+.||+|+||.||+|+. .+|+.||||++...... . .+.+..+..+++.++||||+++++++.+ .+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEEecc-C
Confidence 36899999999999995 47999999999764321 1 2233444556788899999999999987 67899999999 4
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCceEEeecccccccCccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG-HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVAD 537 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 537 (679)
+.+..+.... ...+++..++.++.|+++||+|||++ + |+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (318)
T 2dyl_A 108 TCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-- 179 (318)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--
Confidence 4555555432 34589999999999999999999985 7 9999999999999999999999999997654322
Q ss_pred chhccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchH
Q 005749 538 EMVALAKADGYKAPELQR-----MKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDM 612 (679)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 612 (679)
......+++.|+|||++. ...++.++||||||+++|||++|+.||...... ............ .
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~-~----- 248 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEEP-P----- 248 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSCC-C-----
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccCC-C-----
Confidence 223456899999999984 456899999999999999999999999542211 111111111100 0
Q ss_pred hhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 613 EIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
. .+.......++.+++.+||+.||++||+++|+++.
T Consensus 249 ~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 L-----LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp C-----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred C-----CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 00001123467789999999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-36 Score=314.18 Aligned_cols=244 Identities=10% Similarity=0.071 Sum_probs=177.0
Q ss_pred CccccCCceEEEEEEe-CCCCEEEEEEcccCcccC---cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKD---RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.||+|+||.||+|+. .+++.||||+++...... .+.+.+|++++.+++||||+++++++.+ .+..|+||||+++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~g 115 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCCE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEEEEecCC
Confidence 6899999999999995 458999999998654322 3678999999999999999999999987 6789999999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
++|.++++.. ....++.+|+.|++.||+|||+++ |+||||||+|||+++++.+||+++|
T Consensus 116 ~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 116 GSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp EEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred CCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc------------
Confidence 9999999542 355678899999999999999998 9999999999999999999998543
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGI 618 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 618 (679)
|++| ++.++|||||||++|||++|+.||.+....+..... ..........+....
T Consensus 175 ---------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 229 (286)
T 3uqc_A 175 ---------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIEPADID-- 229 (286)
T ss_dssp ---------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCCHHHHC--
T ss_pred ---------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCChhhcc--
Confidence 3333 688999999999999999999999664432211000 000000000000000
Q ss_pred CCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHhhCCCCCC-CCCCCccccccCCCC
Q 005749 619 RSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVKQLEENRPRNRS-ALYSPTETRSEIGTP 678 (679)
Q Consensus 619 ~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~-~~~~~~~~~~~~~~~ 678 (679)
+....++.+++.+||+.||++| |+.|+++.|+++...... ....|.+.++.++.|
T Consensus 230 ----~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~~~~~p~~~~~~~~~p 285 (286)
T 3uqc_A 230 ----RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285 (286)
T ss_dssp ----TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--------------------
T ss_pred ----cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCccCCCCCCCCCCcccCC
Confidence 1122457789999999999999 999999999998765443 333344444555544
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.4e-37 Score=346.22 Aligned_cols=270 Identities=16% Similarity=0.162 Sum_probs=199.9
Q ss_pred hcCccccCCceEEEEEEe-CCCCEEEEEEcccCc-ccCcccHHHHHHHHhccCCCCCccceEEeeC-----CCCceEEEE
Q 005749 381 TGQVIEKTTYGTAYKAKL-ADGATIALRLLREGS-CKDRSSCLPVIRQLGKVRHENLIPLRAFYQG-----KRGEKLLIY 453 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~-----~~~~~~lv~ 453 (679)
..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.. ..+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 348999999999999995 569999999987642 2335678999999999999999999998754 246779999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCc---eEEeecccccc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFV---SRLTEFGLDQL 530 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~ 530 (679)
||+++|+|.+++..... ...+++..++.|+.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.
T Consensus 98 Ey~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp ECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999986432 335889999999999999999999988 999999999999997664 99999999987
Q ss_pred cCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcc----cc
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEE----TT 606 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~----~~ 606 (679)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..|........ ..
T Consensus 174 ~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 174 LDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVV 246 (676)
T ss_dssp TTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCS
T ss_pred ccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhh
Confidence 64332 224457899999999999999999999999999999999999999543110 00000000000 00
Q ss_pred cccchHhhh--hc---CCCChHHHHHHHHHHHHhccCcCCCCCCCHHH-----HHHHHHhhCCCC
Q 005749 607 MEVFDMEIM--KG---IRSPMEEGLVQALKLAMGCCAPVASVRPTMDE-----VVKQLEENRPRN 661 (679)
Q Consensus 607 ~~~~~~~i~--~~---~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 661 (679)
.+.....+. .. ...........+.+++.+||+.||++|||++| ..+.++++....
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000000000 00 00112234567788999999999999999988 556677766544
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-36 Score=348.46 Aligned_cols=233 Identities=18% Similarity=0.239 Sum_probs=184.9
Q ss_pred CccccCCceEEEEEEeC--CCCEEEEEEcccCcc-cCcccHHHHHHHHhccCCCCCccceEEeeCCCCc----eEEEEEe
Q 005749 383 QVIEKTTYGTAYKAKLA--DGATIALRLLREGSC-KDRSSCLPVIRQLGKVRHENLIPLRAFYQGKRGE----KLLIYDY 455 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~--~~~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~----~~lv~ey 455 (679)
+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++.+++|||||++++++...... .|+||||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence 68999999999999964 689999999875432 3345788999999999999999999999863221 6999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCccc
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAV 535 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 535 (679)
+++++|.+++.. .+++.+++.|+.||+.||+|||+++ |+||||||+|||++.+ .+||+|||+++.....
T Consensus 166 ~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~- 234 (681)
T 2pzi_A 166 VGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF- 234 (681)
T ss_dssp CCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETTCC-
T ss_pred CCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcccC-
Confidence 999999987753 4899999999999999999999988 9999999999999986 8999999999876432
Q ss_pred ccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhh
Q 005749 536 ADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIM 615 (679)
Q Consensus 536 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 615 (679)
....||+.|+|||++.+. ++.++|||||||++|||++|..|+.+...... .
T Consensus 235 ----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------------~-------- 285 (681)
T 2pzi_A 235 ----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------------P-------- 285 (681)
T ss_dssp ----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------C--------
T ss_pred ----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------------c--------
Confidence 345799999999988755 48899999999999999999988743211100 0
Q ss_pred hcCCCChHHHHHHHHHHHHhccCcCCCCCCC-HHHHHHHHHhh
Q 005749 616 KGIRSPMEEGLVQALKLAMGCCAPVASVRPT-MDEVVKQLEEN 657 (679)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs-~~evl~~L~~~ 657 (679)
. ..+.....+.+.+++.+||+.||++||+ ++++.+.|..+
T Consensus 286 ~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 E--DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp T--TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c--cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 0111122356778999999999999995 56666666554
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-36 Score=325.50 Aligned_cols=238 Identities=14% Similarity=0.094 Sum_probs=176.0
Q ss_pred cCccccCCceEEEEEE-eCCCCEEEEEEcccCcc---cCcccHHHHHHHHhccCC-CCCccc---------eEEe-----
Q 005749 382 GQVIEKTTYGTAYKAK-LADGATIALRLLREGSC---KDRSSCLPVIRQLGKVRH-ENLIPL---------RAFY----- 442 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H-~nIv~l---------~~~~----- 442 (679)
+++||+|+||+||+|+ ..+|+.||||+++.... ...+.+.+|+.+++.++| +|.... ...+
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4789999999999999 66799999999874332 335678999999999987 322111 1111
Q ss_pred -------eCC----CCceEEEEEecCCCChHHHhhcc---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005749 443 -------QGK----RGEKLLIYDYFPSRTLHDLLHDT---IAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVR 508 (679)
Q Consensus 443 -------~~~----~~~~~lv~ey~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlk 508 (679)
... ....+++|+++ +++|.+++... ......+++..++.|+.|+++||+|||+++ |+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcc
Confidence 110 12356667765 67999988521 112345889999999999999999999988 9999999
Q ss_pred CCCeeecCCCceEEeecccccccCcccccchhcccccccccccccc----------cccCCCCcchhHHHHHHHHHHHhC
Q 005749 509 SKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQ----------RMKKCSSRTDVYAFGILLLEILIG 578 (679)
Q Consensus 509 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~DV~S~Gvvl~El~tg 578 (679)
|+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||++|
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 99999999999999999998865332 344567 899999998 556688999999999999999999
Q ss_pred CCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhcCCCChHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 005749 579 KKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVK 652 (679)
Q Consensus 579 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPs~~evl~ 652 (679)
+.||......+. .... ..... .. ..++.+++.+||+.||++||++.|+++
T Consensus 314 ~~Pf~~~~~~~~-------------------~~~~-~~~~~-~~---~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 314 DLPNTDDAALGG-------------------SEWI-FRSCK-NI---PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SCCCCTTGGGSC-------------------SGGG-GSSCC-CC---CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcchhhh-------------------HHHH-Hhhcc-cC---CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999954322111 1111 11111 11 255778999999999999999776643
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.6e-35 Score=306.16 Aligned_cols=223 Identities=18% Similarity=0.251 Sum_probs=174.0
Q ss_pred cCccccCCceEEEEEEe-CCCCEEEEEEcccCcccCcccHHHHHHHH-hccCCCCCccceEEeeC---CCCceEEEEEec
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGATIALRLLREGSCKDRSSCLPVIRQL-GKVRHENLIPLRAFYQG---KRGEKLLIYDYF 456 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l-~~l~H~nIv~l~~~~~~---~~~~~~lv~ey~ 456 (679)
+++||+|+||.||+|+. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. .....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 36799999999999994 6799999999864 34678899988 55699999999998864 245689999999
Q ss_pred CCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCceEEeecccccccCc
Q 005749 457 PSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDD---FFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 457 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~ 533 (679)
++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++...
T Consensus 98 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 9999999998643 346899999999999999999999988 999999999999998 7899999999986432
Q ss_pred ccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHh
Q 005749 534 AVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDME 613 (679)
Q Consensus 534 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 613 (679)
+..++.++|||||||++|||++|+.||.+........ .. .. .
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-----------~~-~~----~ 213 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-----------GM-KT----R 213 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-----------CS-CC----S
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-----------HH-HH----H
Confidence 1346789999999999999999999995433211000 00 00 0
Q ss_pred hhhcCC-CCh---HHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 005749 614 IMKGIR-SPM---EEGLVQALKLAMGCCAPVASVRPTMDEVVKQ 653 (679)
Q Consensus 614 i~~~~~-~~~---~~~~~~~~~l~~~cl~~dP~~RPs~~evl~~ 653 (679)
+..+.. .+. .....++.+++.+||+.||++|||++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 111 1123567789999999999999999999985
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.2e-35 Score=314.00 Aligned_cols=236 Identities=12% Similarity=0.110 Sum_probs=176.9
Q ss_pred hcCccccCCceEEEEEEeCCCCEEEEEEcccCcc--------cCcccHHHHHHHHhccC---------CCCCccceEEee
Q 005749 381 TGQVIEKTTYGTAYKAKLADGATIALRLLREGSC--------KDRSSCLPVIRQLGKVR---------HENLIPLRAFYQ 443 (679)
Q Consensus 381 ~~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~---------H~nIv~l~~~~~ 443 (679)
..+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|++++++++ |||||++.+++.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 358999999999999998 689999999976532 12367899999999886 777776666542
Q ss_pred -----------------C------------CCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 005749 444 -----------------G------------KRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYL 494 (679)
Q Consensus 444 -----------------~------------~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~L 494 (679)
+ ..+..++|||||++|++.+.+.. ..+++..++.|+.||+.||+||
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH
Confidence 1 15689999999999977666643 3489999999999999999999
Q ss_pred h-cCCCCCeeecCCCCCCeeecCCC--------------------ceEEeecccccccCcccccchhccccccccccccc
Q 005749 495 H-TGHEIPITHGNVRSKNVLVDDFF--------------------VSRLTEFGLDQLMVPAVADEMVALAKADGYKAPEL 553 (679)
Q Consensus 495 H-~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~ 553 (679)
| +++ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||+
T Consensus 178 H~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~ 248 (336)
T 2vuw_A 178 EASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDL 248 (336)
T ss_dssp HHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGG
T ss_pred HHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhh
Confidence 9 888 99999999999999887 8999999999865322 3479999999999
Q ss_pred ccccCCCCcchhHHHHHH-HHHHHhCCCCCCCCCCCcccchhHHHHHHhhcccccccchHhhhhc-CCC-ChHHHHHHHH
Q 005749 554 QRMKKCSSRTDVYAFGIL-LLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMEVFDMEIMKG-IRS-PMEEGLVQAL 630 (679)
Q Consensus 554 ~~~~~~~~k~DV~S~Gvv-l~El~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~~-~~~~~~~~~~ 630 (679)
+.+.. +.++||||++++ .+++++|..||.. ..|....... ......... ... ..+...+++.
T Consensus 249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDK-----MLKQMTFKTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHH-----HHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred hcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHh-----hhhhhccCcccchhhhhhcCHHHH
Confidence 98766 889999998777 7778889999721 1111111000 000000000 001 1234557788
Q ss_pred HHHHhccCcCCCCCCCHHHHH
Q 005749 631 KLAMGCCAPVASVRPTMDEVV 651 (679)
Q Consensus 631 ~l~~~cl~~dP~~RPs~~evl 651 (679)
+++.+||+.| |++|++
T Consensus 314 dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHhccC-----CHHHHH
Confidence 9999999976 999988
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.9e-31 Score=278.94 Aligned_cols=259 Identities=28% Similarity=0.460 Sum_probs=153.0
Q ss_pred CCChHHHHHHHHHHHhhCCCCCCcccCCCCCCCCCCcc--cccceeecCC--CCC--cccCCCCCCc-------cccc--
Q 005749 27 ASASSDVELLLGKIKSSLQGDDENLLLSSWNISVPLCQ--WRGLKWISTN--GSP--LSCSDISLPQ-------WANL-- 91 (679)
Q Consensus 27 ~~~~~~~~~ll~~~k~~~~~~~~~~~l~~W~~~~~~C~--w~Gv~c~~~~--~~~--l~c~~~~~~~-------~~~l-- 91 (679)
.|.++|+.||+ +||+++.+ +. .+++|+.+++||. |.||+|+..+ ++. ++.+...... +.++
T Consensus 2 ~c~~~~~~aL~-~~k~~~~~--~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALL-QIKKDLGN--PT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHH-HHHHHTTC--CG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHH-HHHHhcCC--cc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 36678889998 99999964 44 7999998889999 9999997654 332 2222211110 1110
Q ss_pred ----ccc------------CCCCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEcc
Q 005749 92 ----SLY------------KDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLS 155 (679)
Q Consensus 92 ----~~~------------~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls 155 (679)
.+. .....+++.|+|++|+++|.+|..|+++++|++|+|++|.|+|.+|..++.+++|++|+|+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 000 0112244455555555555555555555555555555555555555555555555555555
Q ss_pred CCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCC------------------C--CCCCCCccEEEccCccccccc
Q 005749 156 ANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPAL------------------P--NSTCSDLQYLDLGSNKFSGSF 215 (679)
Q Consensus 156 ~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~------------------~--~~~~~~L~~L~l~~N~l~g~~ 215 (679)
+|.++|.+|..+..+.++|+.|+|++|++++.+|..+. + ...+++|++|+|++|++++.+
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 55555555555544422555555555555554443210 0 012345555555555555544
Q ss_pred cccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCccc-CCCCcccccCCCCCCCCCCCCCCC
Q 005749 216 PEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFSE-SKFGAEVFEGNSPALCGFPLRDCS 291 (679)
Q Consensus 216 p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~~-~~~~~~~~~~n~~~~c~~p~~~c~ 291 (679)
|. +..+++|++|+|++|+++|.+|..+..+ +|+.|+|++|+|+|.+|.... ..+....+.+| +.+||.|...|.
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N-~~lc~~p~~~C~ 313 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN-KCLCGSPLPACT 313 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSS-SEEESTTSSCCC
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCC-CCccCCCCCCCC
Confidence 44 5566777777777777777778777776 588888888888888887521 22334456677 889999887773
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.3e-30 Score=291.41 Aligned_cols=186 Identities=17% Similarity=0.060 Sum_probs=131.6
Q ss_pred CccccCCceEEEEEE-eCCCCEEEEEEcccCcc----------cCcccHHHHHHHHhcc-CCCCCccceEEeeCCCCceE
Q 005749 383 QVIEKTTYGTAYKAK-LADGATIALRLLREGSC----------KDRSSCLPVIRQLGKV-RHENLIPLRAFYQGKRGEKL 450 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~----------~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 450 (679)
...+.|+.|.++.++ +..|+.+|+|.+..... ...++|.+|+++|+++ .|+||+++++++.+ ++..|
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~y 318 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGW 318 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEE
Confidence 456677788777766 55699999999965421 2235699999999999 79999999999998 78999
Q ss_pred EEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 451 LIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 451 lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
|||||++|++|.+++... .+++.. +|+.||+.||+|+|+++ ||||||||+|||+++++.+||+|||+|+.
T Consensus 319 LVMEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~ 388 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVT 388 (569)
T ss_dssp EEEECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred EEEecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCee
Confidence 999999999999999863 346654 58999999999999999 99999999999999999999999999987
Q ss_pred cCcccccchhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCC
Q 005749 531 MVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKP 581 (679)
Q Consensus 531 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p 581 (679)
.... .......+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 389 ~~~~-~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 389 TPQD-CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CC----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCC-CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 6443 233455689999999999875 467789999999998877655433
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=1.9e-27 Score=278.66 Aligned_cols=229 Identities=29% Similarity=0.419 Sum_probs=165.0
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCCcccCCCCCCCCCCcccccceeecCCCCC--cccCCCCCCc--------ccc---c
Q 005749 25 SPASASSDVELLLGKIKSSLQGDDENLLLSSWNISVPLCQWRGLKWISTNGSP--LSCSDISLPQ--------WAN---L 91 (679)
Q Consensus 25 ~~~~~~~~~~~ll~~~k~~~~~~~~~~~l~~W~~~~~~C~w~Gv~c~~~~~~~--l~c~~~~~~~--------~~~---l 91 (679)
+.++.++|++||+ +||+++.+ +. .+++|+.+++||+|.||+|+ +|++ ++.+...... +.+ +
T Consensus 6 ~~~~~~~~~~all-~~k~~~~~--~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 6 PSQSLYREIHQLI-SFKDVLPD--KN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp --CCHHHHHHHHH-HHHTTCSC--TT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cccCCHHHHHHHH-HHHhhCCC--cc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 3445678899999 99999974 55 89999988899999999997 4543 2222211110 000 0
Q ss_pred c-------------ccCCCCccEEEEEcCCCCCcccCCc--cccCCCCCCeeecccCcccccCCccc-CCCCCCCEEEcc
Q 005749 92 S-------------LYKDSSIHLLSIQLPSANLTGSLPR--ELGEFSMLQSLYLNVNSLKGTIPFEL-GYSSSLSEIDLS 155 (679)
Q Consensus 92 ~-------------~~~~~~~~l~~l~l~~n~l~g~ip~--~l~~l~~L~~L~L~~N~l~g~ip~~l-~~l~~L~~L~Ls 155 (679)
. .......+++.|+|++|+++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 0 1122345799999999999999999 99999999999999999999999876 889999999999
Q ss_pred CCCCCCcChhhH--HhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCC
Q 005749 156 ANLFTGVLAPSI--WNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNN 233 (679)
Q Consensus 156 ~N~l~g~~p~~~--~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N 233 (679)
+|.+++..|..+ ...+++|++|+|++|++++.+|. ..+++|++|+|++|++++.+|. ++.+++|++|++++|
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-----SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-----TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-----ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 999998877652 23347788888888887765543 3456677777777777666665 666677777777777
Q ss_pred cccccCCcccccc-ccCEEEccCCcCCCCCCCc
Q 005749 234 LFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVF 265 (679)
Q Consensus 234 ~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~ 265 (679)
++++.+|..+..+ +|+.|++++|+++|.+|..
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 266 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc
Confidence 7766666666655 4666666666666666553
No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=3.3e-27 Score=264.25 Aligned_cols=182 Identities=16% Similarity=0.180 Sum_probs=145.2
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCcccC--------cccHHHHHHHHhccCCCCCccceEEeeCCCCceEEEE
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCKD--------RSSCLPVIRQLGKVRHENLIPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~lv~ 453 (679)
.++||+|+||.||+|+. .++.+|+|+........ .+.+.+|++++++++||||+++..++.. .++.++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCccEEEE
Confidence 47899999999999964 47888999865432111 2457999999999999999966665555 56789999
Q ss_pred EecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCc
Q 005749 454 DYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVP 533 (679)
Q Consensus 454 ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 533 (679)
||+++++|.+++.. ++.|+.|+++||+|||+++ |+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999864 4589999999999999988 999999999999998 999999999998754
Q ss_pred ccccc------hhcccccccccccccccc--cCCCCcchhHHHHHHHHHHHhCCCCC
Q 005749 534 AVADE------MVALAKADGYKAPELQRM--KKCSSRTDVYAFGILLLEILIGKKPG 582 (679)
Q Consensus 534 ~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gvvl~El~tg~~p~ 582 (679)
..... .....||+.|||||++.. ..|+.++|+||..+-..|-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 32211 235679999999999986 56888899999999998988888776
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.93 E-value=6.2e-26 Score=265.87 Aligned_cols=190 Identities=36% Similarity=0.611 Sum_probs=143.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhh---------
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNL--------- 170 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~--------- 170 (679)
+++.|+|++|.++|.+|..++.+++|++|+|++|.++|.+|..++.+++|+.|||++|.++|.+|..++..
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 56666666666666666666666777777777777766677666667777777777777766666544321
Q ss_pred ------------------------------------------------------------cccCcEEEccCCCCcccCCC
Q 005749 171 ------------------------------------------------------------CDRLVSLRLHGNSLTAALPE 190 (679)
Q Consensus 171 ------------------------------------------------------------~~~L~~L~Ls~N~l~~~~p~ 190 (679)
+++|+.|||++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 13566777777777777765
Q ss_pred CCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCcc-cC
Q 005749 191 PALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFS-ES 268 (679)
Q Consensus 191 ~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~-~~ 268 (679)
.+ ..+++|++|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+ +|+.||+++|+|+|.||... ..
T Consensus 651 ~l---~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~ 727 (768)
T 3rgz_A 651 EI---GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727 (768)
T ss_dssp GG---GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGG
T ss_pred HH---hccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhc
Confidence 43 457788888888888888888888888889999999999998888888887 58999999999999998753 34
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCC
Q 005749 269 KFGAEVFEGNSPALCGFPLRDCSGN 293 (679)
Q Consensus 269 ~~~~~~~~~n~~~~c~~p~~~c~~~ 293 (679)
.+....|.|| +.+||.|..+|...
T Consensus 728 ~~~~~~~~gN-~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 728 TFPPAKFLNN-PGLCGYPLPRCDPS 751 (768)
T ss_dssp GSCGGGGCSC-TEEESTTSCCCCSC
T ss_pred cCCHHHhcCC-chhcCCCCcCCCCC
Confidence 5677788999 89999999889754
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.92 E-value=7.6e-26 Score=259.31 Aligned_cols=205 Identities=20% Similarity=0.321 Sum_probs=168.1
Q ss_pred CCChHHHHHHHHHHHhhCCCCC------CcccCCCCCCCCCCccc---ccceeecCCCCCcccCCCCCCccccccccCCC
Q 005749 27 ASASSDVELLLGKIKSSLQGDD------ENLLLSSWNISVPLCQW---RGLKWISTNGSPLSCSDISLPQWANLSLYKDS 97 (679)
Q Consensus 27 ~~~~~~~~~ll~~~k~~~~~~~------~~~~l~~W~~~~~~C~w---~Gv~c~~~~~~~l~c~~~~~~~~~~l~~~~~~ 97 (679)
+....|+.||. .+++++.... +.....+|+.++++|.| .||+| +..+
T Consensus 26 ~~~~~d~~aL~-~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C----------~~~~------------- 81 (636)
T 4eco_A 26 AEYIKDYLALK-EIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL----------NSNG------------- 81 (636)
T ss_dssp CHHHHHHHHHH-HHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEE----------CTTC-------------
T ss_pred hhHHHHHHHHH-HHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE----------cCCC-------------
Confidence 33446888988 9999986421 11234589988899999 99995 3221
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccC--------------------------------------------
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVN-------------------------------------------- 133 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N-------------------------------------------- 133 (679)
+|+.|+|+++++.|.+|++|++|++|++|+|++|
T Consensus 82 --~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 82 --RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFS 159 (636)
T ss_dssp --CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred --CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHH
Confidence 4899999999999999999999999999999888
Q ss_pred ----------------------------------cccccCCcccCCCCCCCEEEccCCCCCCc-----------------
Q 005749 134 ----------------------------------SLKGTIPFELGYSSSLSEIDLSANLFTGV----------------- 162 (679)
Q Consensus 134 ----------------------------------~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~----------------- 162 (679)
+|+| ||..++++++|++|+|++|.|+|.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 4456 888899999999999999999985
Q ss_pred ChhhHH--hhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcc-ccc-cccccccCC------CCCCEEEccC
Q 005749 163 LAPSIW--NLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNK-FSG-SFPEFVTRF------EALKELDISN 232 (679)
Q Consensus 163 ~p~~~~--~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~L~ls~ 232 (679)
+|+.+. ++ ++|++|+|++|++.+.+|..+ ..+++|++|+|++|+ ++| .+|..++.+ ++|+.|++++
T Consensus 239 ip~~l~~~~l-~~L~~L~L~~n~l~~~~p~~l---~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~ 314 (636)
T 4eco_A 239 KTEDLKWDNL-KDLTDVEVYNCPNLTKLPTFL---KALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGY 314 (636)
T ss_dssp TTSCCCGGGC-TTCCEEEEECCTTCSSCCTTT---TTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCS
T ss_pred Cchhhhhccc-CCCCEEEecCCcCCccChHHH---hcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCC
Confidence 788776 65 889999999999999888654 467889999999998 988 889888876 8999999999
Q ss_pred CcccccCCc--ccccc-ccCEEEccCCcCCCCCC
Q 005749 233 NLFSGSIPE--GLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 233 N~l~g~~p~--~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
|+++ .+|. .+..+ +|+.|++++|+++|.+|
T Consensus 315 n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 315 NNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp SCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred CcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 9998 7888 78777 68999999999998888
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.92 E-value=1.8e-25 Score=235.05 Aligned_cols=216 Identities=23% Similarity=0.313 Sum_probs=108.8
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCCcccCCCC----CCCCCCcccccceeecCCCCCcccCCCCCCccccccccCCCCcc
Q 005749 25 SPASASSDVELLLGKIKSSLQGDDENLLLSSW----NISVPLCQWRGLKWISTNGSPLSCSDISLPQWANLSLYKDSSIH 100 (679)
Q Consensus 25 ~~~~~~~~~~~ll~~~k~~~~~~~~~~~l~~W----~~~~~~C~w~Gv~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~ 100 (679)
..++..+|..+|+ +||..+.. ++.+.+++| +.+.++|.|.|+.|...... +. . ....+
T Consensus 21 ~~~~~~~~~~aLl-~~k~~~~~-~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~-l~--~-------------~~~~~ 82 (328)
T 4fcg_A 21 GSTALRPYHDVLS-QWQRHYNA-DRNRWHSAWRQANSNNPQIETRTGRALKATADL-LE--D-------------ATQPG 82 (328)
T ss_dssp --CCCCCHHHHHH-HHHHHHHH-CCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHH-HH--H-------------HTSTT
T ss_pred ccccCchHHHHHH-HHHHhccC-CchhhhhhhcccccccccccccCCcchhhhHHH-Hh--c-------------ccccc
Confidence 3445667888998 99998854 355567889 44568999999996321000 00 0 00112
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEcc
Q 005749 101 LLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLH 180 (679)
Q Consensus 101 l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls 180 (679)
++.|+|++|++. .+|+.++++++|++|+|++|.|+ .+|..++.+++|++|+|++|.++ .+|+.+..+ ++|++|+|+
T Consensus 83 l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l-~~L~~L~L~ 158 (328)
T 4fcg_A 83 RVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASL-NRLRELSIR 158 (328)
T ss_dssp CCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGC-TTCCEEEEE
T ss_pred eeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcC-cCCCEEECC
Confidence 445555555554 44555555555555555555555 45555555555555555555554 344444333 455555555
Q ss_pred CCCCcccCCCCCCC------CCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEc
Q 005749 181 GNSLTAALPEPALP------NSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNL 253 (679)
Q Consensus 181 ~N~l~~~~p~~~~~------~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~l 253 (679)
+|++.+.+|..... ...+++|++|+|++|+++ .+|..++.+++|+.|+|++|++++ +|..+..+ +|+.|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 55544444432200 011344555555555544 444444445555555555555442 33334333 3445555
Q ss_pred cCCcCCCCCCC
Q 005749 254 SHNNFSGVLPV 264 (679)
Q Consensus 254 s~N~l~g~ip~ 264 (679)
++|++.+.+|.
T Consensus 237 s~n~~~~~~p~ 247 (328)
T 4fcg_A 237 RGCTALRNYPP 247 (328)
T ss_dssp TTCTTCCBCCC
T ss_pred cCCcchhhhHH
Confidence 55544444443
No 258
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=2.1e-25 Score=261.05 Aligned_cols=199 Identities=22% Similarity=0.329 Sum_probs=144.1
Q ss_pred CCCChHHHHHHHHHHHhhCCCCCCcccCCCCCCCC-----CC--ccc------------ccceeecCCCCCcccCCCCCC
Q 005749 26 PASASSDVELLLGKIKSSLQGDDENLLLSSWNISV-----PL--CQW------------RGLKWISTNGSPLSCSDISLP 86 (679)
Q Consensus 26 ~~~~~~~~~~ll~~~k~~~~~~~~~~~l~~W~~~~-----~~--C~w------------~Gv~c~~~~~~~l~c~~~~~~ 86 (679)
++....|+.||+ +||+++.+ + +|+.+. +| |+| .||+|+. ++
T Consensus 264 ~~~~~~d~~ALl-~~k~~l~~--~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~----------- 323 (876)
T 4ecn_A 264 TAEYIKDYKALK-AIWEALDG--K-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NG----------- 323 (876)
T ss_dssp CCHHHHHHHHHH-HHHHHTTG--G-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TS-----------
T ss_pred cccchHHHHHHH-HHHHHcCC--C-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CC-----------
Confidence 344557889998 99999964 3 897654 56 999 9999643 11
Q ss_pred ccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCeeec-ccCccccc---------------------------
Q 005749 87 QWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYL-NVNSLKGT--------------------------- 138 (679)
Q Consensus 87 ~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L-~~N~l~g~--------------------------- 138 (679)
+|+.|+|++|++.|.+|++|++|++|++|+| ++|.++|.
T Consensus 324 -------------~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~ 390 (876)
T 4ecn_A 324 -------------RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKM 390 (876)
T ss_dssp -------------CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHH
T ss_pred -------------CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhh
Confidence 4778888888888888888888888888888 66655554
Q ss_pred -------------------------------------------------CCcccCCCCCCCEEEccCCCCCC--------
Q 005749 139 -------------------------------------------------IPFELGYSSSLSEIDLSANLFTG-------- 161 (679)
Q Consensus 139 -------------------------------------------------ip~~l~~l~~L~~L~Ls~N~l~g-------- 161 (679)
||..++++++|++|+|++|.|+|
T Consensus 391 ~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~ 470 (876)
T 4ecn_A 391 FLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWE 470 (876)
T ss_dssp HTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCS
T ss_pred hhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccc
Confidence 67777777778888888887777
Q ss_pred ---------cChhhHH--hhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcc-ccc-cccccccCCC-----
Q 005749 162 ---------VLAPSIW--NLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNK-FSG-SFPEFVTRFE----- 223 (679)
Q Consensus 162 ---------~~p~~~~--~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~-l~g-~~p~~~~~l~----- 223 (679)
.+|+.+. ++ ++|+.|+|++|++.+.+|..+ ..+++|++|+|++|+ ++| .+|..+++++
T Consensus 471 ~~s~n~~~g~iP~~l~f~~L-~~L~~L~Ls~N~l~~~iP~~l---~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~ 546 (876)
T 4ecn_A 471 DANSDYAKQYENEELSWSNL-KDLTDVELYNCPNMTQLPDFL---YDLPELQSLNIACNRGISAAQLKADWTRLADDEDT 546 (876)
T ss_dssp CTTSHHHHHHTTSCCCGGGC-TTCCEEEEESCTTCCSCCGGG---GGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTT
T ss_pred ccccccccccCChhhhhccC-CCCCEEECcCCCCCccChHHH---hCCCCCCEEECcCCCCcccccchHHHHhhhhcccc
Confidence 3666654 43 777888888777777777433 456677777777776 777 6776665554
Q ss_pred --CCCEEEccCCcccccCCc--ccccc-ccCEEEccCCcCCCCCC
Q 005749 224 --ALKELDISNNLFSGSIPE--GLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 224 --~L~~L~ls~N~l~g~~p~--~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
+|+.|+|++|+|+ .+|. .+..+ +|+.|+|++|+++ .+|
T Consensus 547 l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 547 GPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp TTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred cCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 7777777777777 6776 66666 5777777777777 666
No 259
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=1.8e-23 Score=214.74 Aligned_cols=152 Identities=13% Similarity=0.166 Sum_probs=120.7
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCccc------------------CcccHHHHHHHHhccCCCCCccceEEee
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCK------------------DRSSCLPVIRQLGKVRHENLIPLRAFYQ 443 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~------------------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 443 (679)
++.||+|+||.||+|+..+|+.||+|.++..... ....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 4789999999999999977999999999653211 1345889999999999 5 67777665
Q ss_pred CCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEe
Q 005749 444 GKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLT 523 (679)
Q Consensus 444 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 523 (679)
. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||+
T Consensus 172 ~--~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 W--EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp E--ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred c--cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 3 56799999999999998 432 123479999999999999988 99999999999999 9999999
Q ss_pred ecccccccCcccccchhcccccccccccccccc----------cCCCCcchhHH
Q 005749 524 EFGLDQLMVPAVADEMVALAKADGYKAPELQRM----------KKCSSRTDVYA 567 (679)
Q Consensus 524 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~k~DV~S 567 (679)
|||+|+.. ..|+|||++.. ..|+.++|+|.
T Consensus 235 DFG~a~~~--------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 235 DFPQSVEV--------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCTTCEET--------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred ECCCCeEC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99998632 33788887753 34555566654
No 260
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.6e-21 Score=198.98 Aligned_cols=216 Identities=22% Similarity=0.288 Sum_probs=166.1
Q ss_pred CCCcccccceeecCC-CCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCccccc
Q 005749 60 VPLCQWRGLKWISTN-GSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGT 138 (679)
Q Consensus 60 ~~~C~w~Gv~c~~~~-~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ 138 (679)
.+.|.|.|+.|.... ...++|+......+. . .-..+++.|+|++|++++..+..|+++++|++|+|++|.|+..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip---~--~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIP---S--NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCC---S--CCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccC---C--CCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 378999999997654 345778765433221 1 1123589999999999977777899999999999999999954
Q ss_pred CCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccccc
Q 005749 139 IPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEF 218 (679)
Q Consensus 139 ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~ 218 (679)
.+..+..+++|++|+|++|.+++.. +..+..+++|++|+|++|++++..+..+ ..+++|++|+|++|++++..+..
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~ 152 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALP-IGVFDQLVNLAELRLDRNQLKSLPPRVF---DSLTKLTYLSLGYNELQSLPKGV 152 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCC-TTTTTTCSSCCEEECCSSCCCCCCTTTT---TTCTTCCEEECCSSCCCCCCTTT
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCC-HhHcccccCCCEEECCCCccCeeCHHHh---CcCcCCCEEECCCCcCCccCHhH
Confidence 4445688999999999999999754 4444445899999999999997655432 46789999999999999766667
Q ss_pred ccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCccc--CCCCcccccCCCCCCCCC
Q 005749 219 VTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFSE--SKFGAEVFEGNSPALCGF 285 (679)
Q Consensus 219 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~~--~~~~~~~~~~n~~~~c~~ 285 (679)
+..+++|+.|+|++|++++..+..+..+ +|+.|+|++|++++..+.... .......+.+| +..|.+
T Consensus 153 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~~~c~c 221 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN-PWDCTC 221 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-CBCCSS
T ss_pred ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCC-CeeCCC
Confidence 8999999999999999997767677776 699999999999976554322 22233344566 666644
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=7.4e-22 Score=199.29 Aligned_cols=193 Identities=18% Similarity=0.170 Sum_probs=156.1
Q ss_pred CCcccccceeecCCCCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCC
Q 005749 61 PLCQWRGLKWISTNGSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIP 140 (679)
Q Consensus 61 ~~C~w~Gv~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip 140 (679)
+||.|.|++|... ...++|+......+. .. -..+++.|+|++|++.+..|..|+++++|++|+|++|.|++..|
T Consensus 3 ~Cp~~~gC~C~~~-~~~l~~~~~~l~~~p---~~--~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG-KKEVDCQGKSLDSVP---SG--IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG-GTEEECTTCCCSSCC---SC--CCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC-CeEEecCCCCccccC---CC--CCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999998532 234667654432211 11 12368999999999999888899999999999999999998888
Q ss_pred cccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccccccc
Q 005749 141 FELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVT 220 (679)
Q Consensus 141 ~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~ 220 (679)
..+..+++|++|+|++|++++..+..+.. +++|+.|+|++|+|++..+. .+ ..+++|++|+|++|+|++..+..++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~-~~--~~l~~L~~L~Ls~N~l~~~~~~~~~ 152 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDH-LTQLDKLYLGGNQLKSLPSG-VF--DRLTKLKELRLNTNQLQSIPAGAFD 152 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTT-TT--TTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcc-cCCCCEEEcCCCcCCCcChh-Hh--ccCCcccEEECcCCcCCccCHHHcC
Confidence 88999999999999999999755444444 58999999999999965443 22 4578999999999999977777899
Q ss_pred CCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCC
Q 005749 221 RFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 221 ~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
.+++|+.|+|++|+|++..|..+..+ +|+.|+|++|.|++..+
T Consensus 153 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 153 KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred cCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 99999999999999998777778777 69999999999988744
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=2e-22 Score=210.33 Aligned_cols=163 Identities=26% Similarity=0.440 Sum_probs=150.6
Q ss_pred cEEEEEcCCCCCcc--cCCccccCCCCCCeeeccc-CcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 100 HLLSIQLPSANLTG--SLPRELGEFSMLQSLYLNV-NSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 100 ~l~~l~l~~n~l~g--~ip~~l~~l~~L~~L~L~~-N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
+|+.|+|++|++.| .+|+.|+++++|++|+|++ |.+.|.+|..++++++|++|+|++|.+++.+|..+..+ ++|++
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~ 129 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI-KTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC-TTCCE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCC-CCCCE
Confidence 69999999999999 9999999999999999995 99999999999999999999999999999998888775 89999
Q ss_pred EEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCC-CCCEEEccCCcccccCCccccccccCEEEccC
Q 005749 177 LRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFE-ALKELDISNNLFSGSIPEGLTRLSLEKLNLSH 255 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~ 255 (679)
|+|++|++++.+|..+ ..+++|++|+|++|+++|.+|..++.++ +|+.|++++|+++|.+|..+..++|+.|++++
T Consensus 130 L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~ 206 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSI---SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206 (313)
T ss_dssp EECCSSEEESCCCGGG---GGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCS
T ss_pred EeCCCCccCCcCChHH---hcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcC
Confidence 9999999998887644 4678999999999999999999999998 99999999999999999999988999999999
Q ss_pred CcCCCCCCCcc
Q 005749 256 NNFSGVLPVFS 266 (679)
Q Consensus 256 N~l~g~ip~~~ 266 (679)
|.+++.+|...
T Consensus 207 N~l~~~~~~~~ 217 (313)
T 1ogq_A 207 NMLEGDASVLF 217 (313)
T ss_dssp SEEEECCGGGC
T ss_pred CcccCcCCHHH
Confidence 99999887643
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.1e-20 Score=184.76 Aligned_cols=157 Identities=20% Similarity=0.214 Sum_probs=133.4
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..+..++.+++|++|+|++|+|++..+..+..+++|++|+|++|++++..+..+.. +++|++|+|
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L 107 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDK-LTQLKELAL 107 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEEC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcC-ccCCCEEEc
Confidence 6899999999999766667899999999999999999665566789999999999999999754433444 589999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccccccCEEEccCCcCC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLNLSHNNFS 259 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~ 259 (679)
++|++++..+.. + ..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..| +|+.|+++.|+++
T Consensus 108 ~~N~l~~~~~~~-~--~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 108 NTNQLQSLPDGV-F--DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHS 178 (208)
T ss_dssp CSSCCCCCCTTT-T--TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT------TTHHHHHHHHHCT
T ss_pred CCCcCcccCHhH-h--ccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC------CHHHHHHHHHhCC
Confidence 999999755432 2 467899999999999997767778999999999999999987654 4788999999999
Q ss_pred CCCCCcc
Q 005749 260 GVLPVFS 266 (679)
Q Consensus 260 g~ip~~~ 266 (679)
|.+|...
T Consensus 179 g~ip~~~ 185 (208)
T 2o6s_A 179 GVVRNSA 185 (208)
T ss_dssp TTBBCTT
T ss_pred ceeeccC
Confidence 9999754
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.82 E-value=2.2e-20 Score=196.17 Aligned_cols=158 Identities=23% Similarity=0.316 Sum_probs=74.9
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHh--------hc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWN--------LC 171 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~--------~~ 171 (679)
+++.|+|++|+++ .+|..++++++|++|+|++|.|+ .+|..++++++|++|+|++|++.+.+|..+.. .+
T Consensus 105 ~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 105 HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 3445555555555 45555555555555555555555 44555555555555555555554444443321 12
Q ss_pred ccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCE
Q 005749 172 DRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEK 250 (679)
Q Consensus 172 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~ 250 (679)
++|+.|+|++|+++ .+|..+ ..+++|++|+|++|++++ +|..++.+++|+.|+|++|++.+.+|..+..+ +|+.
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l---~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASI---ANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGG---GGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCEEECcCCCcC-cchHhh---cCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 44555555555544 333221 233444444444444442 33344444444444444444444444444444 3444
Q ss_pred EEccCCcCCCCCCC
Q 005749 251 LNLSHNNFSGVLPV 264 (679)
Q Consensus 251 l~ls~N~l~g~ip~ 264 (679)
|+|++|++.+.+|.
T Consensus 258 L~L~~n~~~~~~p~ 271 (328)
T 4fcg_A 258 LILKDCSNLLTLPL 271 (328)
T ss_dssp EECTTCTTCCBCCT
T ss_pred EECCCCCchhhcch
Confidence 44444444444443
No 265
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.8e-19 Score=179.12 Aligned_cols=167 Identities=23% Similarity=0.253 Sum_probs=101.5
Q ss_pred CCCCCCCCCCcccccceeecCCCCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCeeeccc
Q 005749 53 LSSWNISVPLCQWRGLKWISTNGSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNV 132 (679)
Q Consensus 53 l~~W~~~~~~C~w~Gv~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~ 132 (679)
..-|..+...|+|.+|. |+.... +.+|..+. ++|++|+|++
T Consensus 9 ~~~~~~~~~~Cs~~~v~----------c~~~~l---------------------------~~ip~~~~--~~L~~L~Ls~ 49 (229)
T 3e6j_A 9 HSAACPSQCSCSGTTVD----------CRSKRH---------------------------ASVPAGIP--TNAQILYLHD 49 (229)
T ss_dssp --CCCCTTCEEETTEEE----------CTTSCC---------------------------SSCCSCCC--TTCSEEECCS
T ss_pred hhccCCCCCEEeCCEeE----------ccCCCc---------------------------CccCCCCC--CCCCEEEcCC
Confidence 34566677899999999 543221 13343332 5666666666
Q ss_pred CcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccc
Q 005749 133 NSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFS 212 (679)
Q Consensus 133 N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~ 212 (679)
|.|++..|..+..+++|++|+|++|+|++ +|+..+..+++|+.|+|++|+|++..+. .+ ..+++|++|+|++|+|+
T Consensus 50 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~~~~~l~~L~~L~Ls~N~l~~l~~~-~~--~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 50 NQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSLTQLTVLDLGTNQLTVLPSA-VF--DRLVHLKELFMCCNKLT 125 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTT-TT--TTCTTCCEEECCSSCCC
T ss_pred CccCccCHHHhhCccCCcEEECCCCCCCC-cChhhcccCCCcCEEECCCCcCCccChh-Hh--CcchhhCeEeccCCccc
Confidence 66666556666666666666666666654 3333333346666666666666644332 11 24566777777777776
Q ss_pred ccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCC
Q 005749 213 GSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 213 g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
.+|..+..+++|+.|+|++|+|++..+..+..+ +|+.|+|++|.+++..+
T Consensus 126 -~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 126 -ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred -ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 566666777777777777777765544555555 57777777777665544
No 266
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.81 E-value=1.5e-19 Score=184.53 Aligned_cols=161 Identities=21% Similarity=0.204 Sum_probs=136.2
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++.+ + +.++.+++|++|+|++|.|++..|..++.+++|++|+|++|++++..+..+.. +++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDK-LTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEE
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhcc-CCCCCEEE
Confidence 358899999999987 3 48999999999999999999777777899999999999999999765444444 48999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|++++..+..+ ..+++|++|++++|++++..|..++.+++|+.|++++|++++..|..+..+ +|+.|++++|.
T Consensus 140 L~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 140 LAHNQLQSLPKGVF---DKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp CCSSCCCCCCTTTT---TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCccCHHHh---ccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 99999996555322 467899999999999998777778999999999999999998877777777 69999999999
Q ss_pred CCCCCCCc
Q 005749 258 FSGVLPVF 265 (679)
Q Consensus 258 l~g~ip~~ 265 (679)
+++..|..
T Consensus 217 ~~~~~~~l 224 (272)
T 3rfs_A 217 WDCTCPGI 224 (272)
T ss_dssp BCCCTTTT
T ss_pred ccccCcHH
Confidence 99988854
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.79 E-value=1.1e-18 Score=179.27 Aligned_cols=160 Identities=23% Similarity=0.224 Sum_probs=75.6
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCC-CCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANL-FTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~L~~L~ 178 (679)
+++.|+|++|++++..+..|+.+++|++|+|++|.+++..|..+..+++|++|+|++|. +++..|..+.. +++|++|+
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~-l~~L~~L~ 111 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG-LGRLHTLH 111 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTT-CTTCCEEE
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcC-CcCCCEEE
Confidence 34555555555554444445555555555555555554445555555555555555554 33322323322 24555555
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|++++..|..+ ..+++|++|++++|++++..+..++.+++|+.|+|++|++++..+..+..+ +|+.|++++|.
T Consensus 112 l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 112 LDRCGLQELGPGLF---RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp CTTSCCCCCCTTTT---TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCCEECHhHh---hCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 55555554333211 234445555555555544333344445555555555555543333334333 34555555555
Q ss_pred CCCCCC
Q 005749 258 FSGVLP 263 (679)
Q Consensus 258 l~g~ip 263 (679)
+++..|
T Consensus 189 l~~~~~ 194 (285)
T 1ozn_A 189 VAHVHP 194 (285)
T ss_dssp CCEECT
T ss_pred ccccCH
Confidence 544443
No 268
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.79 E-value=6.8e-19 Score=180.91 Aligned_cols=163 Identities=21% Similarity=0.169 Sum_probs=143.2
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCc-ccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNS-LKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~-l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
..+++.|+|++|.+++..|..++.+++|++|+|++|. +++..|..+..+++|++|+|++|.+++..|..+.. +++|++
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~ 133 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG-LAALQY 133 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhC-CcCCCE
Confidence 4579999999999999889999999999999999998 87666888999999999999999999876655555 489999
Q ss_pred EEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccC
Q 005749 177 LRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSH 255 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~ 255 (679)
|+|++|++++..+..+ ..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..+ +|+.|++++
T Consensus 134 L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 210 (285)
T 1ozn_A 134 LYLQDNALQALPDDTF---RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFA 210 (285)
T ss_dssp EECCSSCCCCCCTTTT---TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECCCCcccccCHhHh---ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCC
Confidence 9999999997554322 467899999999999997666779999999999999999999989999887 699999999
Q ss_pred CcCCCCCCC
Q 005749 256 NNFSGVLPV 264 (679)
Q Consensus 256 N~l~g~ip~ 264 (679)
|++++..|.
T Consensus 211 n~l~~~~~~ 219 (285)
T 1ozn_A 211 NNLSALPTE 219 (285)
T ss_dssp SCCSCCCHH
T ss_pred CcCCcCCHH
Confidence 999986654
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.79 E-value=1.7e-18 Score=178.43 Aligned_cols=178 Identities=24% Similarity=0.236 Sum_probs=143.6
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..|..|..+++|++|+|++|.|++ +|.. +.+++|++|+|++|+++ .+|..+..+ ++|+.|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l-~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTL-PALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTC-TTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccC-CCCCEEE
Confidence 368899999999999889999999999999999999996 4443 78999999999999998 466655554 8999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|+|++..|..+ ..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+ +|+.|+|++|+
T Consensus 107 l~~N~l~~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 183 (290)
T 1p9a_G 107 VSFNRLTSLPLGAL---RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183 (290)
T ss_dssp CCSSCCCCCCSSTT---TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCcccCHHHH---cCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCc
Confidence 99999997655432 467899999999999997777778999999999999999996555556666 69999999999
Q ss_pred CCCCCCCcccCC--CCcccccCCCCCCCCC
Q 005749 258 FSGVLPVFSESK--FGAEVFEGNSPALCGF 285 (679)
Q Consensus 258 l~g~ip~~~~~~--~~~~~~~~n~~~~c~~ 285 (679)
|+ .+|...... .....+.+| |..|.+
T Consensus 184 l~-~ip~~~~~~~~L~~l~L~~N-p~~C~c 211 (290)
T 1p9a_G 184 LY-TIPKGFFGSHLLPFAFLHGN-PWLCNC 211 (290)
T ss_dssp CC-CCCTTTTTTCCCSEEECCSC-CBCCSG
T ss_pred CC-ccChhhcccccCCeEEeCCC-CccCcC
Confidence 99 455543221 222334455 676643
No 270
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.78 E-value=9.9e-19 Score=185.51 Aligned_cols=188 Identities=23% Similarity=0.256 Sum_probs=146.3
Q ss_pred CCCCCCCCcccccceeecCCCCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCc
Q 005749 55 SWNISVPLCQWRGLKWISTNGSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNS 134 (679)
Q Consensus 55 ~W~~~~~~C~w~Gv~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~ 134 (679)
.|.....+|.|.|+ |+.. ..... .+.. .-..+++.|+|++|++++..+..++++++|++|+|++|.
T Consensus 22 ~~~~~~~~C~~~~~-c~~~--------~~~l~---~iP~--~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKGS--------SGSLN---SIPS--GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EECC--------STTCS---SCCT--TCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeCC--------CCCcc---cccc--cccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 35555678999998 5432 22111 1111 011368999999999997666689999999999999999
Q ss_pred ccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCC-CCCCCCCCCCccEEEccCcc-cc
Q 005749 135 LKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPE-PALPNSTCSDLQYLDLGSNK-FS 212 (679)
Q Consensus 135 l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~~~~~~~L~~L~l~~N~-l~ 212 (679)
+++..|..++++++|++|+|++|.+++. |+..+..+++|++|+|++|++++ +|. ..+ ..+++|++|++++|+ ++
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~--~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNL-SSSWFKPLSSLTFLNLLGNPYKT-LGETSLF--SHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSC-CHHHHTTCTTCSEEECTTCCCSS-SCSSCSC--TTCTTCCEEEEEESSSCC
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcC-CHhHhCCCccCCEEECCCCCCcc-cCchhhh--ccCCCCcEEECCCCcccc
Confidence 9988888899999999999999999974 45534445899999999999995 443 222 467899999999994 77
Q ss_pred ccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCC
Q 005749 213 GSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSG 260 (679)
Q Consensus 213 g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g 260 (679)
+..|..+..+++|+.|++++|++++..|..+..+ +|+.|++++|.++.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 6667789999999999999999999889988887 69999999999854
No 271
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2.6e-19 Score=181.28 Aligned_cols=135 Identities=16% Similarity=0.215 Sum_probs=103.7
Q ss_pred cCccccCCceEEEEEEe-CCCCE--EEEEEcccCcccC------------------------cccHHHHHHHHhccCCCC
Q 005749 382 GQVIEKTTYGTAYKAKL-ADGAT--IALRLLREGSCKD------------------------RSSCLPVIRQLGKVRHEN 434 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~-~~~~~--vAvK~~~~~~~~~------------------------~~~~~~Ei~~l~~l~H~n 434 (679)
.+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++++.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999996 78989 9999875432110 125789999999999987
Q ss_pred CccceEEeeCCCCceEEEEEecCC-C----ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCC
Q 005749 435 LIPLRAFYQGKRGEKLLIYDYFPS-R----TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLH-TGHEIPITHGNVR 508 (679)
Q Consensus 435 Iv~l~~~~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivHrDlk 508 (679)
+....-+.. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+|||||
T Consensus 132 i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrDlk 198 (258)
T 1zth_A 132 VSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEAE---LVHADLS 198 (258)
T ss_dssp CCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTSC---EECSSCS
T ss_pred CCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHCC---EEeCCCC
Confidence 532222221 357899999942 4 66665432 224456789999999999999 887 9999999
Q ss_pred CCCeeecCCCceEEeeccccccc
Q 005749 509 SKNVLVDDFFVSRLTEFGLDQLM 531 (679)
Q Consensus 509 p~NILl~~~~~~kl~DFGla~~~ 531 (679)
|+|||+++ .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 272
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.78 E-value=2.7e-18 Score=188.55 Aligned_cols=161 Identities=24% Similarity=0.198 Sum_probs=91.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHh---------
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWN--------- 169 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 169 (679)
.+|+.|+|++|++++..|..|..+++|++|+|++|.|++..+..+..+++|++|+|++|.+++..+..+..
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 34556666666666555556666666666666666666444444555666666666666655322211111
Q ss_pred ---------------hcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCc
Q 005749 170 ---------------LCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNL 234 (679)
Q Consensus 170 ---------------~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 234 (679)
.+++|+.|+|++|++++. |. ...+++|++|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~----~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN----LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC----CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCccccc-cc----ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 112333333333333321 11 1234566677777777776667777777777777777777
Q ss_pred ccccCCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 235 FSGSIPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 235 l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
+++..|..+..+ +|+.|+|++|+|++..+.
T Consensus 254 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 254 VSLIERNAFDGLASLVELNLAHNNLSSLPHD 284 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CceECHHHhcCCCCCCEEECCCCcCCccChH
Confidence 776666666665 577777777777755444
No 273
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.77 E-value=4.3e-18 Score=171.55 Aligned_cols=158 Identities=21% Similarity=0.210 Sum_probs=135.5
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEcc
Q 005749 101 LLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLH 180 (679)
Q Consensus 101 l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls 180 (679)
...+++++++++ .+|..+. ++|+.|+|++|.+++..|..+..+++|++|+|++|.+++..+..+.. +++|+.|+|+
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~ 91 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD-LTELGTLGLA 91 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc-CCcCCEEECC
Confidence 456888999887 6887765 69999999999999888888999999999999999999876555555 4899999999
Q ss_pred CCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCC
Q 005749 181 GNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 181 ~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~ 259 (679)
+|++++..+..+ ..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++..|..+..+ +|+.|+|++|+|+
T Consensus 92 ~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 92 NNQLASLPLGVF---DHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp TSCCCCCCTTTT---TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcccccChhHh---cccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 999997655432 467899999999999997777778999999999999999997777678777 6999999999999
Q ss_pred CCCCCc
Q 005749 260 GVLPVF 265 (679)
Q Consensus 260 g~ip~~ 265 (679)
+..|..
T Consensus 169 ~~~~~~ 174 (251)
T 3m19_A 169 SVPHGA 174 (251)
T ss_dssp CCCTTT
T ss_pred ccCHHH
Confidence 877744
No 274
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.77 E-value=4.1e-19 Score=203.38 Aligned_cols=162 Identities=17% Similarity=0.258 Sum_probs=146.8
Q ss_pred CccEEEEEcCCCCCccc-----------------CCcccc--CCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCC
Q 005749 98 SIHLLSIQLPSANLTGS-----------------LPRELG--EFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANL 158 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~-----------------ip~~l~--~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 158 (679)
..+++.|+|++|+++|. +|++++ ++++|++|+|++|.+.|.+|..++++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 45789999999999997 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-cChhhHHhh-----cccCcEEEccCCCCcccCCC--CCCCCCCCCCccEEEccCccccccccccccCCCCCCEEE
Q 005749 159 -FTG-VLAPSIWNL-----CDRLVSLRLHGNSLTAALPE--PALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELD 229 (679)
Q Consensus 159 -l~g-~~p~~~~~~-----~~~L~~L~Ls~N~l~~~~p~--~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 229 (679)
++| .+|..+..+ +++|+.|+|++|+++ .+|. .+ ..+++|++|++++|+++|.+| .++.+++|+.|+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l---~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL---QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH---TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh---ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 999 899888774 379999999999999 6775 33 467899999999999999999 899999999999
Q ss_pred ccCCcccccCCcccccc-c-cCEEEccCCcCCCCCCCcc
Q 005749 230 ISNNLFSGSIPEGLTRL-S-LEKLNLSHNNFSGVLPVFS 266 (679)
Q Consensus 230 ls~N~l~g~~p~~~~~l-~-L~~l~ls~N~l~g~ip~~~ 266 (679)
+++|+++ .+|..+..+ + |+.|++++|+++ .+|...
T Consensus 360 L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp CCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred CCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 9999999 889888887 6 999999999999 777643
No 275
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.77 E-value=1.8e-18 Score=179.54 Aligned_cols=161 Identities=24% Similarity=0.287 Sum_probs=90.6
Q ss_pred ccEEEEEcCCCCCc--ccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 99 IHLLSIQLPSANLT--GSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 99 ~~l~~l~l~~n~l~--g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
.+++.|+|++|.++ |.+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|.+++..+...+..+++|++
T Consensus 52 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 130 (306)
T 2z66_A 52 TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 130 (306)
T ss_dssp TTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCE
Confidence 35566666666655 333555555666666666666665 355556666666666666666655433122222356666
Q ss_pred EEccCCCCcccCCCCCCCCCCCCCccEEEccCccccc-cccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEcc
Q 005749 177 LRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG-SFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLS 254 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls 254 (679)
|+|++|.+++..|..+ ..+++|++|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+ +|+.|+|+
T Consensus 131 L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 207 (306)
T 2z66_A 131 LDISHTHTRVAFNGIF---NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207 (306)
T ss_dssp EECTTSCCEECSTTTT---TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred EECCCCcCCccchhhc---ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECC
Confidence 6666666665444322 234566666666666654 455556666666666666666665555555554 46666666
Q ss_pred CCcCCCCCC
Q 005749 255 HNNFSGVLP 263 (679)
Q Consensus 255 ~N~l~g~ip 263 (679)
+|++++..+
T Consensus 208 ~N~l~~~~~ 216 (306)
T 2z66_A 208 HNNFFSLDT 216 (306)
T ss_dssp TSCCSBCCS
T ss_pred CCccCccCh
Confidence 666655433
No 276
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=171.00 Aligned_cols=152 Identities=20% Similarity=0.196 Sum_probs=77.6
Q ss_pred EcCCCCCcccCCccccCCCCCCeeecccCcccccCCc-ccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCC
Q 005749 105 QLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPF-ELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNS 183 (679)
Q Consensus 105 ~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~ 183 (679)
++++|+++ .||..+. ..+++|+|++|+|++..|. .+..+++|++|+|++|.+++..+..+..+ ++|+.|+|++|+
T Consensus 17 ~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l-~~L~~L~Ls~N~ 92 (220)
T 2v70_A 17 DCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGA-SGVNEILLTSNR 92 (220)
T ss_dssp ECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTC-TTCCEEECCSSC
T ss_pred EeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCC-CCCCEEECCCCc
Confidence 34444443 2444332 2345555555555544332 24555555555555555554433333332 555555555555
Q ss_pred CcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCC
Q 005749 184 LTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVL 262 (679)
Q Consensus 184 l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~i 262 (679)
+++..+..+ ..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ +|+.|+|++|.|++..
T Consensus 93 l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 93 LENVQHKMF---KGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCGGGG---TTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred cCccCHhHh---cCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 554333211 234555556666666555555555566666666666666665555555555 4666666666665544
Q ss_pred C
Q 005749 263 P 263 (679)
Q Consensus 263 p 263 (679)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 3
No 277
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.77 E-value=7.3e-19 Score=193.02 Aligned_cols=164 Identities=19% Similarity=0.139 Sum_probs=140.8
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCC-cccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIP-FELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+| ..+..+++|++|||++|.+++..|..+..+ ++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGL-ANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTC-TTCCEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCc-ccCCEE
Confidence 468999999999999889999999999999999999987775 568999999999999999998877777665 899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccccc-ccCCCCCCEEEccCCcccccCCcccccc---ccCEEEc
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEF-VTRFEALKELDISNNLFSGSIPEGLTRL---SLEKLNL 253 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~~l---~L~~l~l 253 (679)
+|++|++++.+|... ....+++|++|+|++|++++..|.. +..+++|++|++++|++++..|..+..+ +++.|++
T Consensus 109 ~L~~n~l~~~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l 187 (455)
T 3v47_A 109 TLTQCNLDGAVLSGN-FFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRL 187 (455)
T ss_dssp ECTTSCCBTHHHHSS-TTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEEC
T ss_pred eCCCCCCCccccCcc-cccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccc
Confidence 999999998554321 1246789999999999999887876 8999999999999999999888887765 5788888
Q ss_pred cCCcCCCCCCC
Q 005749 254 SHNNFSGVLPV 264 (679)
Q Consensus 254 s~N~l~g~ip~ 264 (679)
++|.+++..+.
T Consensus 188 ~~n~l~~~~~~ 198 (455)
T 3v47_A 188 SSITLQDMNEY 198 (455)
T ss_dssp TTCBCTTCSTT
T ss_pred ccCcccccchh
Confidence 88888775543
No 278
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=6.6e-18 Score=172.36 Aligned_cols=176 Identities=20% Similarity=0.223 Sum_probs=141.7
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++.+|.+.. + +.++.+++|++|+|++|.+++ + ..++.+++|++|+|++|.+++..+..+.. +++|++|+|
T Consensus 42 ~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 116 (272)
T 3rfs_A 42 SIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDK-LTNLKELVL 116 (272)
T ss_dssp TCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEEC
T ss_pred ceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcC-CcCCCEEEC
Confidence 48889999998873 3 368999999999999999996 4 47899999999999999999765444444 589999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..+..+ ..+++|++|+|++|++++..|..++.+++|+.|++++|++++..|..+..+ +|+.|++++|++
T Consensus 117 ~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 117 VENQLQSLPDGVF---DKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp TTSCCCCCCTTTT---TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcCCccCHHHh---ccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 9999997655322 467899999999999998777778999999999999999998777777776 799999999999
Q ss_pred CCCCCCccc--CCCCcccccCCCCCCCC
Q 005749 259 SGVLPVFSE--SKFGAEVFEGNSPALCG 284 (679)
Q Consensus 259 ~g~ip~~~~--~~~~~~~~~~n~~~~c~ 284 (679)
++..|.... .......+.+| +..|.
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N-~~~~~ 220 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDN-PWDCT 220 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSS-CBCCC
T ss_pred CccCHHHHhCCcCCCEEEccCC-Ccccc
Confidence 998775432 22233334455 44444
No 279
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=3.8e-18 Score=174.47 Aligned_cols=161 Identities=21% Similarity=0.197 Sum_probs=124.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..+..++++++|++|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+ ++|+.|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL-SSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC-TTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC-ccccEEEC
Confidence 57888899998887777788889999999999998887666678888899999999998887655555554 88999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccc-cccccccCCCCCCEEEccCCcccccCCcccccc-ccC----EEEc
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG-SFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLE----KLNL 253 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~----~l~l 253 (679)
++|++++..+.. ...+++|++|++++|++++ .+|..++.+++|+.|++++|++++..+..+..+ +|+ .|++
T Consensus 108 ~~n~l~~~~~~~---~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~l 184 (276)
T 2z62_A 108 VETNLASLENFP---IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (276)
T ss_dssp TTSCCCCSTTCC---CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEEC
T ss_pred CCCCccccCchh---cccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeec
Confidence 999888754432 2467788888888888876 368888888888888888888887666655544 344 6777
Q ss_pred cCCcCCCCCCC
Q 005749 254 SHNNFSGVLPV 264 (679)
Q Consensus 254 s~N~l~g~ip~ 264 (679)
++|.+++..+.
T Consensus 185 s~n~l~~~~~~ 195 (276)
T 2z62_A 185 SLNPMNFIQPG 195 (276)
T ss_dssp CSSCCCEECTT
T ss_pred CCCcccccCcc
Confidence 77777655443
No 280
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=3e-18 Score=175.21 Aligned_cols=183 Identities=21% Similarity=0.210 Sum_probs=148.3
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
..+++.|+|++|.+.+..+..++.+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..+..+.. +++|+.|
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L 129 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH-LKTLKEL 129 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTT-CTTCCEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhccc-CCCCCEE
Confidence 457999999999999877889999999999999999999888888999999999999999999865545555 4899999
Q ss_pred EccCCCCccc-CCCCCCCCCCCCCccEEEccCccccccccccccCCCCCC----EEEccCCcccccCCccccccccCEEE
Q 005749 178 RLHGNSLTAA-LPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALK----ELDISNNLFSGSIPEGLTRLSLEKLN 252 (679)
Q Consensus 178 ~Ls~N~l~~~-~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~----~L~ls~N~l~g~~p~~~~~l~L~~l~ 252 (679)
+|++|++++. +|..+ ..+++|++|+|++|++++..+..+..+++|+ .|++++|++++..+..+...+|+.|+
T Consensus 130 ~l~~n~l~~~~l~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~ 206 (276)
T 2z62_A 130 NVAHNLIQSFKLPEYF---SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELA 206 (276)
T ss_dssp ECCSSCCCCCCCCGGG---GGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEE
T ss_pred ECcCCccceecCchhh---ccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEE
Confidence 9999999873 45432 4678999999999999987777787777777 89999999998777777666899999
Q ss_pred ccCCcCCCCCCCccc--CCCCcccccCCCCCCCCC
Q 005749 253 LSHNNFSGVLPVFSE--SKFGAEVFEGNSPALCGF 285 (679)
Q Consensus 253 ls~N~l~g~ip~~~~--~~~~~~~~~~n~~~~c~~ 285 (679)
+++|++++..+.... .......+.+| +..|.+
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N-~~~c~c 240 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTN-PWDCSC 240 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSS-CBCCCT
T ss_pred CCCCceeecCHhHhcccccccEEEccCC-cccccC
Confidence 999999976654322 22233334455 556644
No 281
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.76 E-value=3.4e-18 Score=192.42 Aligned_cols=157 Identities=20% Similarity=0.190 Sum_probs=136.6
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..|..|+++++|++|+|++|++++..|..++.+++|++|||++|.+++..|..+..+ ++|++|+
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~ 104 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL-SSLKYLN 104 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC-TTCCEEE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC-CCCcEEE
Confidence 368999999999999989999999999999999999998888899999999999999999998766556654 8999999
Q ss_pred ccCCCCccc-CCCCCCCCCCCCCccEEEccCcccccccc-ccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccC
Q 005749 179 LHGNSLTAA-LPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSH 255 (679)
Q Consensus 179 Ls~N~l~~~-~p~~~~~~~~~~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~ 255 (679)
|++|++++. +|..+ ..+++|++|++++|++.+.+| ..+.++++|+.|++++|++++.+|..+..+ +|+.|++++
T Consensus 105 Ls~n~l~~~~~~~~~---~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 181 (549)
T 2z81_A 105 LMGNPYQTLGVTSLF---PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHL 181 (549)
T ss_dssp CTTCCCSSSCSSCSC---TTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEEC
T ss_pred CCCCcccccchhhhh---hccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEeccc
Confidence 999999863 33322 468899999999999666666 579999999999999999999999988877 588888888
Q ss_pred CcCC
Q 005749 256 NNFS 259 (679)
Q Consensus 256 N~l~ 259 (679)
|.+.
T Consensus 182 n~~~ 185 (549)
T 2z81_A 182 SESA 185 (549)
T ss_dssp SBST
T ss_pred Cccc
Confidence 8764
No 282
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.76 E-value=2.9e-18 Score=178.04 Aligned_cols=163 Identities=20% Similarity=0.193 Sum_probs=142.1
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCC-cccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIP-FELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|+|++|.+. .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..+..+ ++|+.|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL-SSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC-TTCCEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC-cCCCEE
Confidence 47889999999988 588889999999999999999996554 578999999999999999998776655554 899999
Q ss_pred EccCCCCcc-cCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccC
Q 005749 178 RLHGNSLTA-ALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSH 255 (679)
Q Consensus 178 ~Ls~N~l~~-~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~ 255 (679)
+|++|.+++ .+|... ..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+ +|+.|++++
T Consensus 156 ~l~~n~l~~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 232 (306)
T 2z66_A 156 KMAGNSFQENFLPDIF---TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 232 (306)
T ss_dssp ECTTCEEGGGEECSCC---TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTT
T ss_pred ECCCCccccccchhHH---hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCC
Confidence 999999987 455433 467899999999999998889999999999999999999998777677766 699999999
Q ss_pred CcCCCCCCCcc
Q 005749 256 NNFSGVLPVFS 266 (679)
Q Consensus 256 N~l~g~ip~~~ 266 (679)
|++++.+|...
T Consensus 233 N~l~~~~~~~~ 243 (306)
T 2z66_A 233 NHIMTSKKQEL 243 (306)
T ss_dssp SCCCBCSSSSC
T ss_pred CCCcccCHHHH
Confidence 99999888654
No 283
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=5.9e-18 Score=167.01 Aligned_cols=133 Identities=24% Similarity=0.297 Sum_probs=64.2
Q ss_pred CCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCcc
Q 005749 123 SMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQ 202 (679)
Q Consensus 123 ~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~ 202 (679)
++|+.|+|++|+|++..|..+..+++|++|+|++|++++..|..+.++ ++|++|+|++|+|+.. |...+ ..+++|+
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~~L~~L~Ls~N~l~~l-~~~~f--~~l~~L~ 107 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL-RSLNSLVLYGNKITEL-PKSLF--EGLFSLQ 107 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTC-SSCCEEECCSSCCCCC-CTTTT--TTCTTCC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCC-cCCCEEECCCCcCCcc-CHhHc--cCCCCCC
Confidence 344555555555554333344445555555555555544433333332 4455555555555432 22211 2344555
Q ss_pred EEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCC
Q 005749 203 YLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 203 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~ 259 (679)
+|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+ +|+.|+|++|.|+
T Consensus 108 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 108 LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred EEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55555555555445555555555555555555554444444444 3555555555543
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.75 E-value=7.4e-18 Score=191.65 Aligned_cols=111 Identities=19% Similarity=0.257 Sum_probs=77.6
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+|+.|+|++|++++..|..|+.+++|++|+|++|.|++..|..++++++|++|+|++|.|++ +|+.++..+++|+.|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCC-CCHHHhccCCCCCEEE
Confidence 357778888888777777778888888888888888877666667778888888888888775 4444433347788888
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG 213 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g 213 (679)
|++|.+++.+|..+ ..+++|++|+|++|++++
T Consensus 154 Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTF---QATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTT---TTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhh---hcCCcCcEEECcCCCCCC
Confidence 88887776655432 345566666666666654
No 285
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=8.6e-18 Score=165.83 Aligned_cols=137 Identities=18% Similarity=0.176 Sum_probs=120.9
Q ss_pred cEEEEEcCCCCCcccCCc-cccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPR-ELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~-~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.++.|+|++|++++..|. .|+.+++|++|+|++|.|++..|..+..+++|++|+|++|.+++..+..+.. +++|+.|+
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~ 111 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG-LESLKTLM 111 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTT-CSSCCEEE
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcC-CcCCCEEE
Confidence 367899999999988664 5899999999999999999877778999999999999999999866555555 58999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCC
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIP 240 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 240 (679)
|++|+|++..|..+ ..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 112 Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 112 LRSNRITCVGNDSF---IGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTSS---TTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCeECHhHc---CCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998777543 467899999999999999889999999999999999999987544
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.75 E-value=7.4e-18 Score=192.56 Aligned_cols=203 Identities=20% Similarity=0.193 Sum_probs=147.1
Q ss_pred cccCCCCCCCCCCcccccceeecCCCCCcccCCCCCCccc-cccccCCCCccEEEEEcCCCCCcccCCccccCCCCCCee
Q 005749 50 NLLLSSWNISVPLCQWRGLKWISTNGSPLSCSDISLPQWA-NLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQSL 128 (679)
Q Consensus 50 ~~~l~~W~~~~~~C~w~Gv~c~~~~~~~l~c~~~~~~~~~-~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L 128 (679)
...+++|+.+. |..|....|... ...++|+..+...+. ++ ...++.|+|++|++++..|..|.++++|++|
T Consensus 10 ~~~~~~~~~~~-p~~~~~c~~~~~-~~~~~c~~~~l~~vP~~l------p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L 81 (635)
T 4g8a_A 10 DDKLAAANSSI-PESWEPCVEVVP-NITYQCMELNFYKIPDNL------PFSTKNLDLSFNPLRHLGSYSFFSFPELQVL 81 (635)
T ss_dssp ----------------CCSEEEET-TTEEECTTSCCSSCCSSS------CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cchhhcccCCC-CCCCCCccccCC-CCEEECCCCCcCccCCCC------CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEE
Confidence 34567776543 333544333222 122457654432221 11 1358999999999998777899999999999
Q ss_pred ecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccC
Q 005749 129 YLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGS 208 (679)
Q Consensus 129 ~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~ 208 (679)
+|++|+|++..|..+.++++|++|+|++|+|++..+..+.+ +++|++|+|++|++++..+.. + ..+++|++|+|++
T Consensus 82 ~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~-L~~L~~L~Ls~N~l~~l~~~~-~--~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 82 DLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-LSSLQKLVAVETNLASLENFP-I--GHLKTLKELNVAH 157 (635)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT-CTTCCEEECTTSCCCCSTTCC-C--TTCTTCCEEECCS
T ss_pred ECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC-CCCCCEEECCCCcCCCCChhh-h--hcCcccCeecccc
Confidence 99999999777778999999999999999999754444444 599999999999999754432 2 5788999999999
Q ss_pred ccccc-cccccccCCCCCCEEEccCCcccccCCcccccc-----ccCEEEccCCcCCCCCCC
Q 005749 209 NKFSG-SFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-----SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 209 N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-----~L~~l~ls~N~l~g~ip~ 264 (679)
|++++ .+|..++.+++|++|++++|+|++..|..+..+ ....++++.|.++...|.
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~ 219 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 219 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT
T ss_pred CccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc
Confidence 99975 578899999999999999999998888877655 245799999999876554
No 287
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.75 E-value=2.7e-18 Score=178.95 Aligned_cols=161 Identities=21% Similarity=0.175 Sum_probs=126.4
Q ss_pred CccEEEEEcCCCCCcccCCccccCC-----CCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcC--hhhH-Hh
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEF-----SMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVL--APSI-WN 169 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l-----~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~--p~~~-~~ 169 (679)
..+++.|+|++|.+++. |..++.+ ++|++|+|++|+|++..|..++.+++|++|||++|++.|.+ |+.+ ..
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45688999999999887 8888877 89999999999999877788999999999999999988752 3333 13
Q ss_pred hcccCcEEEccCCCCccc--CCCCCCCCCCCCCccEEEccCcccccccc-ccccCCCCCCEEEccCCcccccCCcccccc
Q 005749 170 LCDRLVSLRLHGNSLTAA--LPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKELDISNNLFSGSIPEGLTRL 246 (679)
Q Consensus 170 ~~~~L~~L~Ls~N~l~~~--~p~~~~~~~~~~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l 246 (679)
.+++|+.|+|++|++++. ++...+ ..+++|++|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+. .
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~ 274 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALA--AARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-A 274 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHH--HTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-S
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHH--hcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-C
Confidence 348899999999998842 111110 245789999999999998775 45667889999999999998 7887776 5
Q ss_pred ccCEEEccCCcCCCCCCC
Q 005749 247 SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 247 ~L~~l~ls~N~l~g~ip~ 264 (679)
+|+.|+|++|+|++. |.
T Consensus 275 ~L~~L~Ls~N~l~~~-p~ 291 (312)
T 1wwl_A 275 KLSVLDLSYNRLDRN-PS 291 (312)
T ss_dssp EEEEEECCSSCCCSC-CC
T ss_pred CceEEECCCCCCCCC-hh
Confidence 689999999999887 54
No 288
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=1.7e-17 Score=169.03 Aligned_cols=162 Identities=19% Similarity=0.184 Sum_probs=136.7
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
..+|+.|+|++|++++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|.+++..+..+.. +++|+.|
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L 138 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS-LTKLTYL 138 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT-CTTCCEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc-CcCCCEE
Confidence 457999999999998555556789999999999999999766667899999999999999999865544444 5899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
+|++|++++..+. .+ ..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+ +|+.|+|++|
T Consensus 139 ~Ls~n~l~~~~~~-~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 215 (270)
T 2o6q_A 139 SLGYNELQSLPKG-VF--DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215 (270)
T ss_dssp ECCSSCCCCCCTT-TT--TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCCcCCccCHh-Hc--cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCC
Confidence 9999999965443 22 467899999999999997777779999999999999999997666667766 6999999999
Q ss_pred cCCCCCC
Q 005749 257 NFSGVLP 263 (679)
Q Consensus 257 ~l~g~ip 263 (679)
.+...-+
T Consensus 216 ~~~c~c~ 222 (270)
T 2o6q_A 216 PWDCTCN 222 (270)
T ss_dssp CBCCSSS
T ss_pred CeeCCCc
Confidence 9987654
No 289
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.75 E-value=6.8e-19 Score=183.49 Aligned_cols=161 Identities=19% Similarity=0.159 Sum_probs=71.6
Q ss_pred cEEEEEcCCCCCcccCCccc--cCCCCCCeeecccCcccccCCcccCCC-----CCCCEEEccCCCCCCcChhhHHhhcc
Q 005749 100 HLLSIQLPSANLTGSLPREL--GEFSMLQSLYLNVNSLKGTIPFELGYS-----SSLSEIDLSANLFTGVLAPSIWNLCD 172 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l--~~l~~L~~L~L~~N~l~g~ip~~l~~l-----~~L~~L~Ls~N~l~g~~p~~~~~~~~ 172 (679)
+++.|+|++|+++|.+|..+ +.+++|++|+|++|.|++. |..++.+ ++|++|+|++|++++..|..+..+ +
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l-~ 173 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF-P 173 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC-S
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC-C
Confidence 34445555555555555443 4455555555555555443 4444433 455555555555544333333332 4
Q ss_pred cCcEEEccCCCCcccCC--CCCCCCCCCCCccEEEccCccccc--ccc-ccccCCCCCCEEEccCCcccccCCc-ccccc
Q 005749 173 RLVSLRLHGNSLTAALP--EPALPNSTCSDLQYLDLGSNKFSG--SFP-EFVTRFEALKELDISNNLFSGSIPE-GLTRL 246 (679)
Q Consensus 173 ~L~~L~Ls~N~l~~~~p--~~~~~~~~~~~L~~L~l~~N~l~g--~~p-~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l 246 (679)
+|+.|+|++|++.+.++ ... ....+++|++|+|++|++++ .++ ..+..+++|+.|+|++|++++.+|. .+..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISAL-CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHS-CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHH-HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 45555555555443211 000 01233455555555555541 111 2223445555555555555544432 22222
Q ss_pred -ccCEEEccCCcCCCCCCC
Q 005749 247 -SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 247 -~L~~l~ls~N~l~g~ip~ 264 (679)
+|+.|+|++|+|+ .+|.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~ 270 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPK 270 (312)
T ss_dssp TTCCEEECTTSCCS-SCCS
T ss_pred CCCCEEECCCCccC-hhhh
Confidence 3555555555555 3443
No 290
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=2.4e-18 Score=201.40 Aligned_cols=160 Identities=21% Similarity=0.239 Sum_probs=143.3
Q ss_pred CccEEEEEcCCCCCcc-----------------cCCcccc--CCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCC
Q 005749 98 SIHLLSIQLPSANLTG-----------------SLPRELG--EFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANL 158 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g-----------------~ip~~l~--~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 158 (679)
..+|+.|+|++|+++| .+|++++ +|++|++|+|++|.+.|.+|..++++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3578999999999999 5999988 99999999999999999999999999999999999998
Q ss_pred -CCC-cChhhHHhhc------ccCcEEEccCCCCcccCCC--CCCCCCCCCCccEEEccCccccccccccccCCCCCCEE
Q 005749 159 -FTG-VLAPSIWNLC------DRLVSLRLHGNSLTAALPE--PALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKEL 228 (679)
Q Consensus 159 -l~g-~~p~~~~~~~------~~L~~L~Ls~N~l~~~~p~--~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 228 (679)
|+| .+|..+..+. ++|+.|+|++|+++ .+|. .+ ..+++|++|+|++|+++ .+| .++.+++|+.|
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l---~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL---QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH---TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh---hcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 999 8888887651 38999999999999 6775 33 46789999999999999 889 89999999999
Q ss_pred EccCCcccccCCcccccc-c-cCEEEccCCcCCCCCCCc
Q 005749 229 DISNNLFSGSIPEGLTRL-S-LEKLNLSHNNFSGVLPVF 265 (679)
Q Consensus 229 ~ls~N~l~g~~p~~~~~l-~-L~~l~ls~N~l~g~ip~~ 265 (679)
+|++|+++ .+|..+..+ + |+.|+|++|+|+ .+|..
T Consensus 601 ~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 601 KLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp ECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 99999999 889888877 5 999999999999 77754
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.74 E-value=3.2e-18 Score=187.91 Aligned_cols=136 Identities=21% Similarity=0.247 Sum_probs=65.1
Q ss_pred CCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccE
Q 005749 124 MLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQY 203 (679)
Q Consensus 124 ~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~ 203 (679)
+|++|+|++|.+++.+|..++.+++|++|+|++|.+++..|..+..+ ++|+.|+|++|++++..|..+ ..+++|++
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~ 351 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL-THLLKLNLSQNFLGSIDSRMF---ENLDKLEV 351 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCCEECGGGG---TTCTTCCE
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc-ccCCEEECCCCccCCcChhHh---cCcccCCE
Confidence 45555555555554445455555555555555555554433333332 455555555555544333221 23445555
Q ss_pred EEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCC
Q 005749 204 LDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 204 L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
|+|++|++++..|..+..+++|++|+|++|+|++..+..+..+ +|+.|++++|++++.+|
T Consensus 352 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 352 LDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 5555555554445555555555555555555554333333333 35555555555555544
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.74 E-value=1.5e-17 Score=181.98 Aligned_cols=181 Identities=22% Similarity=0.206 Sum_probs=119.5
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhH-----------
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSI----------- 167 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~----------- 167 (679)
.+|+.|+|++|++.+..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..+
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 467777777777776666777777777777777777775444457777777777777777764332222
Q ss_pred -------------HhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCc
Q 005749 168 -------------WNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNL 234 (679)
Q Consensus 168 -------------~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 234 (679)
+..+++|+.|+|++|+++. +|. ...+++|++|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~----~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 242 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN----LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 242 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC----CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc----cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCc
Confidence 2223455555555555552 221 1345678888888888887777888888888888888888
Q ss_pred ccccCCcccccc-ccCEEEccCCcCCCCCCCccc--CCCCcccccCCCCCCCCC
Q 005749 235 FSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFSE--SKFGAEVFEGNSPALCGF 285 (679)
Q Consensus 235 l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~~--~~~~~~~~~~n~~~~c~~ 285 (679)
+++..|..+..+ +|+.|+|++|+|++..+.... .......+.+| |..|.+
T Consensus 243 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-p~~CdC 295 (440)
T 3zyj_A 243 IQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN-PWNCNC 295 (440)
T ss_dssp CCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSS-CEECSS
T ss_pred eeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCC-CccCCC
Confidence 887777777776 688888888888866554322 12222334455 666654
No 293
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.74 E-value=3.6e-18 Score=191.16 Aligned_cols=179 Identities=26% Similarity=0.314 Sum_probs=122.4
Q ss_pred CCCCCCCCCCc-----ccccc-eeecCCCCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCCCCC
Q 005749 53 LSSWNISVPLC-----QWRGL-KWISTNGSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFSMLQ 126 (679)
Q Consensus 53 l~~W~~~~~~C-----~w~Gv-~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~ 126 (679)
+.+|..+.++| .|.|+ .|...+-..++++...... +.... ..+++.|+|++|+++ .|| +.+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~---lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS---LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC---CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc---cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45676666778 79999 6765555556665443222 11111 245788888888887 677 4578888
Q ss_pred eeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEc
Q 005749 127 SLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDL 206 (679)
Q Consensus 127 ~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l 206 (679)
+|+|++|+|++ +|. +.. +|++|+|++|.|++ +|+ .+++|+.|+|++|+|++ +|. .+++|++|+|
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~------~l~~L~~L~L 167 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE------LPTSLEVLSV 167 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC------CCTTCCEEEC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC------cCCCcCEEEC
Confidence 88888888886 777 554 78888888888887 554 34778888888888876 443 3457888888
Q ss_pred cCccccccccccccCCCCCCEEEccCCcccccCCcccccccc-------CEEEccCCcCCCCCCC
Q 005749 207 GSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSL-------EKLNLSHNNFSGVLPV 264 (679)
Q Consensus 207 ~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L-------~~l~ls~N~l~g~ip~ 264 (679)
++|+|++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+. ||.
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~-~L~~~~~~L~~L~Ls~N~l~~-lp~ 224 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV-RNHHSEETEIFFRCRENRITH-IPE 224 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------CCEEEECCSSCCCC-CCG
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH-hhhcccccceEEecCCCccee-cCH
Confidence 8888875 666 54 77888888888887 5666 444 56 778888887774 554
No 294
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.7e-17 Score=163.67 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=120.4
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..+..|..+++|++|+|++|.|++..|..+..+++|++|+|++|.|++ +|+..+..+++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~ 110 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLL 110 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCc-cCHhHccCCCCCCEEE
Confidence 368999999999998777799999999999999999998889999999999999999999995 5565555559999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSG 237 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 237 (679)
|++|++++..|..+ ..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+..
T Consensus 111 L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 111 LNANKINCLRVDAF---QDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSSCCCCCCTTTT---TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCCEeCHHHc---CCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999998766543 467899999999999998877889999999999999999974
No 295
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.73 E-value=8.1e-18 Score=191.71 Aligned_cols=160 Identities=18% Similarity=0.124 Sum_probs=82.2
Q ss_pred ccEEEEEcCCCCCccc--CCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 99 IHLLSIQLPSANLTGS--LPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~--ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
.+++.|+|++|.+++. +|..++.+++|++|+|++|.+++ +|..+..+++|++|+|++|.+++..|...+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4566666666666654 35556666666666666666553 44555555555555555555555444222222355555
Q ss_pred EEccCCCCcccCCCCCC----------------------CCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCc
Q 005749 177 LRLHGNSLTAALPEPAL----------------------PNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNL 234 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~----------------------~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 234 (679)
|++++|++++.+|..+. ....+++|++|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 55555555554443220 00234445555555555554444445555555555555555
Q ss_pred ccccCCcccccc-ccCEEEccCCcCC
Q 005749 235 FSGSIPEGLTRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 235 l~g~~p~~~~~l-~L~~l~ls~N~l~ 259 (679)
+++.+|..+..+ +|+.|+|++|+|+
T Consensus 509 l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 509 LLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCcCHHHccCCCcCCEEECCCCcCc
Confidence 554445444444 3555555555555
No 296
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.73 E-value=1.8e-17 Score=188.80 Aligned_cols=163 Identities=20% Similarity=0.140 Sum_probs=144.8
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..+.++ ++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGL-TSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTC-TTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCc-ccCCEEE
Confidence 468999999999999888899999999999999999998888899999999999999999998777777665 8999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccc-cccccccCCCCCCEEEccCCcccccCCccccccc-----cCEEE
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG-SFPEFVTRFEALKELDISNNLFSGSIPEGLTRLS-----LEKLN 252 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-----L~~l~ 252 (679)
|++|++++..|..+ ..+++|++|++++|++++ .+|..++++++|++|++++|++++..|..+..+. +..|+
T Consensus 111 L~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~ 187 (606)
T 3vq2_A 111 AVETKLASLESFPI---GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLD 187 (606)
T ss_dssp CTTSCCCCSSSSCC---TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEE
T ss_pred ccCCcccccccccc---CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceee
Confidence 99999997665442 578899999999999986 6899999999999999999999998888887762 45899
Q ss_pred ccCCcCCCCCCCc
Q 005749 253 LSHNNFSGVLPVF 265 (679)
Q Consensus 253 ls~N~l~g~ip~~ 265 (679)
+++|.+++..+..
T Consensus 188 l~~n~l~~~~~~~ 200 (606)
T 3vq2_A 188 MSLNPIDFIQDQA 200 (606)
T ss_dssp CTTCCCCEECTTT
T ss_pred ccCCCcceeCccc
Confidence 9999998766543
No 297
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=3.3e-18 Score=178.05 Aligned_cols=175 Identities=19% Similarity=0.175 Sum_probs=132.9
Q ss_pred cEEEEEcCCCCCcccCCccc--cCCCCCCeeecccCcccccCC----cccCCCCCCCEEEccCCCCCCcChhhHHhhccc
Q 005749 100 HLLSIQLPSANLTGSLPREL--GEFSMLQSLYLNVNSLKGTIP----FELGYSSSLSEIDLSANLFTGVLAPSIWNLCDR 173 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l--~~l~~L~~L~L~~N~l~g~ip----~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~ 173 (679)
+++.|+|++|++.+.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+.. +++
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~-l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRA-FPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCC-CTT
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhcc-CCC
Confidence 48899999999999999988 999999999999999998766 34567899999999999998766555555 489
Q ss_pred CcEEEccCCCCccc--CCCCCCCCCCCCCccEEEccCccccccccc----cccCCCCCCEEEccCCcccccCCcccccc-
Q 005749 174 LVSLRLHGNSLTAA--LPEPALPNSTCSDLQYLDLGSNKFSGSFPE----FVTRFEALKELDISNNLFSGSIPEGLTRL- 246 (679)
Q Consensus 174 L~~L~Ls~N~l~~~--~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~ls~N~l~g~~p~~~~~l- 246 (679)
|++|+|++|++.+. ++.... ...+++|++|+|++|+++ .+|. .++.+++|++|||++|+|++.+|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALC-PHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSC-TTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCEEECCCCCCccchhhhHHHh-hhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 99999999998752 221111 135678899999999887 3333 35678889999999999988777777665
Q ss_pred ---ccCEEEccCCcCCCCCCCcccCCCCcccccCC
Q 005749 247 ---SLEKLNLSHNNFSGVLPVFSESKFGAEVFEGN 278 (679)
Q Consensus 247 ---~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~n 278 (679)
+|+.|+|++|+|+ .+|.........-.+.+|
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N 282 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSN 282 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCC
Confidence 6888999999988 566544333333333344
No 298
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.73 E-value=1.2e-17 Score=190.31 Aligned_cols=163 Identities=25% Similarity=0.233 Sum_probs=85.3
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcc-cCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFE-LGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
+++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|.. +..+++|++|+|++|.+++..|..+..+ ++|+.|+
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~ 455 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL-PALQHLN 455 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC-TTCCEEE
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC-CCCCEEE
Confidence 4455555555555555555555555555555555555444333 4555555555555555554443333332 5555555
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|++++...........+++|++|+|++|++++..|..++.+++|+.|+|++|++++.+|..+..+ .| .|++++|+
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~ 534 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc
Confidence 55555554211100011234556666666666665555566666666666666666666556555555 35 66666666
Q ss_pred CCCCCCC
Q 005749 258 FSGVLPV 264 (679)
Q Consensus 258 l~g~ip~ 264 (679)
+++.+|.
T Consensus 535 l~~~~~~ 541 (606)
T 3t6q_A 535 ISIILPS 541 (606)
T ss_dssp CCCCCGG
T ss_pred ccccCHh
Confidence 6655554
No 299
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.73 E-value=4.5e-17 Score=159.06 Aligned_cols=140 Identities=22% Similarity=0.241 Sum_probs=118.5
Q ss_pred CCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCc
Q 005749 122 FSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDL 201 (679)
Q Consensus 122 l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L 201 (679)
.++|++|+|++|.|++..+..+..+++|++|+|++|++++. |+..+..+++|++|+|++|++++..+. .+ ..+++|
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~--~~l~~L 102 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQSLPNG-VF--DKLTQL 102 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTT-TT--TTCTTC
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc-ChhhcCCCCCcCEEECCCCcCCccCHh-Hh--cCccCC
Confidence 46899999999999976666688999999999999999965 444444458999999999999965443 22 467899
Q ss_pred cEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCc
Q 005749 202 QYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVF 265 (679)
Q Consensus 202 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~ 265 (679)
++|+|++|++++..+..+..+++|+.|++++|++++..+..+..+ +|+.|++++|.+++..|..
T Consensus 103 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 167 (208)
T 2o6s_A 103 KELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 167 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTT
T ss_pred CEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCCH
Confidence 999999999997777778999999999999999997666667766 6999999999999988854
No 300
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.73 E-value=1.7e-17 Score=183.42 Aligned_cols=161 Identities=19% Similarity=0.219 Sum_probs=131.4
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.++++|++|+|++|.+++. |+..+..+++|+.|+|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLI-PLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSC-CTTSSTTCTTCCEEEC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCcc-CcccccCCCCCCEEEC
Confidence 578899999999888888899999999999999999988888899999999999999998864 4443333588999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..|..+ ..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+ +|+.|+|++|.+
T Consensus 112 s~n~i~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 188 (477)
T 2id5_A 112 SENKIVILLDYMF---QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNI 188 (477)
T ss_dssp TTSCCCEECTTTT---TTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCC
T ss_pred CCCccccCChhHc---cccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcC
Confidence 9999987766543 467789999999999888878888888899999999998886655566666 688888888888
Q ss_pred CCCCCC
Q 005749 259 SGVLPV 264 (679)
Q Consensus 259 ~g~ip~ 264 (679)
++..+.
T Consensus 189 ~~~~~~ 194 (477)
T 2id5_A 189 NAIRDY 194 (477)
T ss_dssp CEECTT
T ss_pred cEeChh
Confidence 876553
No 301
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.72 E-value=5.4e-18 Score=187.71 Aligned_cols=159 Identities=23% Similarity=0.247 Sum_probs=94.0
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhh-------------
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPS------------- 166 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~------------- 166 (679)
+|+.|+|++|++++..|..|+.+++|++|+|++|.|++.+| ++.+++|++|||++|.|++..+..
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 57777777777777666777777777777777777776555 777777777777777766532110
Q ss_pred --HHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccccccc-CCCCCCEEEccCCcccccCCccc
Q 005749 167 --IWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVT-RFEALKELDISNNLFSGSIPEGL 243 (679)
Q Consensus 167 --~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~ 243 (679)
....+++|+.|+|++|++++..|..+ ..+++|++|+|++|++++.+|..+. .+++|+.|+|++|.|++. |...
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~ 188 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDE---GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQV 188 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCG---GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCC
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhh---cCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccc
Confidence 00012345555555555554433221 2345666666666666665555554 566666666666666644 2222
Q ss_pred cccccCEEEccCCcCCCCCCC
Q 005749 244 TRLSLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 244 ~~l~L~~l~ls~N~l~g~ip~ 264 (679)
...+|+.|+|++|.|++..|.
T Consensus 189 ~l~~L~~L~Ls~N~l~~~~~~ 209 (487)
T 3oja_A 189 VFAKLKTLDLSSNKLAFMGPE 209 (487)
T ss_dssp CCTTCCEEECCSSCCCEECGG
T ss_pred cCCCCCEEECCCCCCCCCCHh
Confidence 222466666666666665544
No 302
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.72 E-value=1.2e-16 Score=167.83 Aligned_cols=161 Identities=22% Similarity=0.301 Sum_probs=94.4
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..|..++.+++|++|+|++|.|+ .+|..+. ++|++|++++|.+++..+..+.. +++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~ 151 (330)
T 1xku_A 76 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNG-LNQMIVVE 151 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTT-CTTCCEEE
T ss_pred CCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcC-CccccEEE
Confidence 45677777777777666777777777777777777776 4555443 45666666666665543333333 36666666
Q ss_pred ccCCCCcc--cCCCCC------------------CCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCccccc
Q 005749 179 LHGNSLTA--ALPEPA------------------LPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGS 238 (679)
Q Consensus 179 Ls~N~l~~--~~p~~~------------------~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 238 (679)
|++|.++. ..+... +|....++|++|++++|++++..|..+..+++|+.|++++|++++.
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 66666642 222110 1111124566666666666655566666666666666666666665
Q ss_pred CCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 239 IPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 239 ~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
.|..+..+ +|+.|+|++|+++ .+|.
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 55555555 4666666666666 4443
No 303
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=196.07 Aligned_cols=85 Identities=24% Similarity=0.271 Sum_probs=57.3
Q ss_pred CCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccccccCEEEccCCcCCCCCCCcccCCCCcccccC
Q 005749 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLNLSHNNFSGVLPVFSESKFGAEVFEG 277 (679)
Q Consensus 198 ~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~ 277 (679)
+++|++|+|++|+|++..|..+..+++|+.|+|++|+|++..|..+. .+|+.|+|++|+|++.+|.... ......+.+
T Consensus 479 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~-~L~~l~l~~ 556 (844)
T 3j0a_A 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVFV-SLSVLDITH 556 (844)
T ss_dssp BCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCCS-SCCEEEEEE
T ss_pred cccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHhC-CcCEEEecC
Confidence 45677777777777766677777788888888888888765555444 4688888888888888776532 333334445
Q ss_pred CCCCCCCC
Q 005749 278 NSPALCGF 285 (679)
Q Consensus 278 n~~~~c~~ 285 (679)
| |..|.+
T Consensus 557 N-p~~C~c 563 (844)
T 3j0a_A 557 N-KFICEC 563 (844)
T ss_dssp E-CCCCSS
T ss_pred C-Cccccc
Confidence 5 666643
No 304
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=1.5e-17 Score=176.98 Aligned_cols=157 Identities=22% Similarity=0.162 Sum_probs=101.9
Q ss_pred cEEEEEcCCCCCcccCCcccc-CCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPRELG-EFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~-~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.++.|+|++|++++..+..+. .+++|++|+|++|+|++..|..+.++++|++|||++|+|++..+..+.. +++|+.|+
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~ 118 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD-LQALEVLL 118 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEE
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC-CcCCCEEE
Confidence 356677777777766666666 7777777777777777666666777777777777777777544333333 47777777
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccc---cCCCCCCEEEccCCcccccCCccccccc---cCEEE
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFV---TRFEALKELDISNNLFSGSIPEGLTRLS---LEKLN 252 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~---~~l~~L~~L~ls~N~l~g~~p~~~~~l~---L~~l~ 252 (679)
|++|+|++..|..+ ..+++|++|+|++|+|++..+..+ ..+++|+.|+|++|+|++..+..+..+. ++.|+
T Consensus 119 L~~N~i~~~~~~~~---~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~ 195 (361)
T 2xot_A 119 LYNNHIVVVDRNAF---EDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195 (361)
T ss_dssp CCSSCCCEECTTTT---TTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEE
T ss_pred CCCCcccEECHHHh---CCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEE
Confidence 77777776544332 356677777777777774322333 4577777777777777744334444442 46677
Q ss_pred ccCCcCCC
Q 005749 253 LSHNNFSG 260 (679)
Q Consensus 253 ls~N~l~g 260 (679)
|++|.+..
T Consensus 196 l~~N~~~C 203 (361)
T 2xot_A 196 LHNNPLEC 203 (361)
T ss_dssp CCSSCEEC
T ss_pred ecCCCccC
Confidence 77776653
No 305
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.71 E-value=5.4e-17 Score=167.21 Aligned_cols=156 Identities=25% Similarity=0.305 Sum_probs=132.2
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
..+++.|+|++|++++.-+ . +.+++|++|+|++|.|+ .+|..+..+++|++|+|++|++++..|..+.. +++|+.|
T Consensus 54 l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~-l~~L~~L 129 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG-LGELQEL 129 (290)
T ss_dssp CTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTT-CTTCCEE
T ss_pred CCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcC-CCCCCEE
Confidence 4579999999999986433 3 89999999999999998 79999999999999999999999765555555 4899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
+|++|++++..+ ..+ ..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+... +|+.|+|++|
T Consensus 130 ~L~~N~l~~~~~-~~~--~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~N 205 (290)
T 1p9a_G 130 YLKGNELKTLPP-GLL--TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205 (290)
T ss_dssp ECTTSCCCCCCT-TTT--TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC
T ss_pred ECCCCCCCccCh-hhc--ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCC
Confidence 999999996544 333 45789999999999999665667789999999999999999 677776655 7999999999
Q ss_pred cCCCC
Q 005749 257 NFSGV 261 (679)
Q Consensus 257 ~l~g~ 261 (679)
.+...
T Consensus 206 p~~C~ 210 (290)
T 1p9a_G 206 PWLCN 210 (290)
T ss_dssp CBCCS
T ss_pred CccCc
Confidence 98754
No 306
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.71 E-value=3e-17 Score=185.30 Aligned_cols=177 Identities=23% Similarity=0.242 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCcccCCccc-----------------------------------------------------cCCCCCC
Q 005749 100 HLLSIQLPSANLTGSLPREL-----------------------------------------------------GEFSMLQ 126 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l-----------------------------------------------------~~l~~L~ 126 (679)
+++.|++++|.++|.+|..+ +.+++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78999999999999888766 7789999
Q ss_pred eeecccCcccccCCcccCCCCCCCEEEccCCCCCCc--ChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEE
Q 005749 127 SLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGV--LAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYL 204 (679)
Q Consensus 127 ~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~--~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L 204 (679)
+|+|++|.+++.+|..++.+++|++|+|++|++++. +|..+.. +++|+.|+|++|++++.+|...+ ..+++|++|
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~~--~~l~~L~~L 433 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKN-MSSLETLDVSLNSLNSHAYDRTC--AWAESILVL 433 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTT-CTTCCEEECTTSCCBSCCSSCCC--CCCTTCCEE
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcC-CCCCCEEECCCCcCCCccChhhh--cCcccCCEE
Confidence 999999999999999999999999999999999974 2333444 48999999999999987776543 457899999
Q ss_pred EccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCccc---CCCCcccccCCCC
Q 005749 205 DLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFSE---SKFGAEVFEGNSP 280 (679)
Q Consensus 205 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~~---~~~~~~~~~~n~~ 280 (679)
++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+ +|+.|+|++|+|++ +|.... .......+.+| +
T Consensus 434 ~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N-~ 508 (562)
T 3a79_B 434 NLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDN-P 508 (562)
T ss_dssp ECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSC-C
T ss_pred ECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCC-C
Confidence 9999999988887654 79999999999998 788877776 69999999999994 565311 12223334455 5
Q ss_pred CCCC
Q 005749 281 ALCG 284 (679)
Q Consensus 281 ~~c~ 284 (679)
..|.
T Consensus 509 ~~c~ 512 (562)
T 3a79_B 509 WDCT 512 (562)
T ss_dssp BCCC
T ss_pred cCCC
Confidence 5554
No 307
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.71 E-value=4.6e-17 Score=175.06 Aligned_cols=133 Identities=18% Similarity=0.273 Sum_probs=72.0
Q ss_pred cEEEEEcCCCCCcccCCc-cccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPR-ELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~-~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
+++.|++.+|.+.. +|+ .+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.. +++|++|+
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 123 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLV 123 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEE
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcC-CCCCCEEE
Confidence 34555555555443 333 3455666666666666665544445566666666666666665543333333 25566666
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSG 237 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 237 (679)
|++|+++. +|...+ ..+++|++|++++|++++..|..+..+++|+.|++++|++++
T Consensus 124 L~~n~l~~-l~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 124 LERNDLSS-LPRGIF--HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCC-CCTTTT--TTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCc-CCHHHh--cCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 66666653 222221 234556666666666655555555566666666666666553
No 308
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=183.51 Aligned_cols=139 Identities=23% Similarity=0.280 Sum_probs=115.9
Q ss_pred cCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCC--cChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCC
Q 005749 120 GEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTG--VLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNST 197 (679)
Q Consensus 120 ~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 197 (679)
+.+++|++|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+ ++|+.|+|++|++++.+|...+ ..
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l-~~L~~L~Ls~N~l~~~l~~~~~--~~ 397 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQM-KSLQQLDISQNSVSYDEKKGDC--SW 397 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTC-TTCCEEECCSSCCBCCGGGCSC--CC
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhC-CCCCEEECCCCcCCcccccchh--cc
Confidence 678899999999999998899999999999999999999987 444555554 8999999999999986665433 35
Q ss_pred CCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCc
Q 005749 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVF 265 (679)
Q Consensus 198 ~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~ 265 (679)
+++|++|++++|++++.+|..+. ++|+.|++++|+++ .+|..+..+ +|+.|++++|+|+. +|..
T Consensus 398 l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~ 462 (520)
T 2z7x_B 398 TKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDG 462 (520)
T ss_dssp CTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTT
T ss_pred CccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHH
Confidence 67899999999999988887664 78999999999998 788877766 69999999999994 5653
No 309
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1.3e-18 Score=201.57 Aligned_cols=226 Identities=19% Similarity=0.094 Sum_probs=132.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCcccCCCCCC-CCCCcccccceeecCCCCCcccCCCCCCcc--ccccccCCCCccEEEEEc
Q 005749 30 SSDVELLLGKIKSSLQGDDENLLLSSWNI-SVPLCQWRGLKWISTNGSPLSCSDISLPQW--ANLSLYKDSSIHLLSIQL 106 (679)
Q Consensus 30 ~~~~~~ll~~~k~~~~~~~~~~~l~~W~~-~~~~C~w~Gv~c~~~~~~~l~c~~~~~~~~--~~l~~~~~~~~~l~~l~l 106 (679)
..+..+++ .+...+.. +....-..|.. .++.+.|.++.+....-..++......... ..+.........+..+++
T Consensus 131 ~~~~~~l~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALM-EMADTLTD-SKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHH-HHHHHHHH-HHTTC---------------------------------------------------------
T ss_pred ccchhhhh-hhhhhccc-ccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 34556666 66665432 01122335643 335677988874433222222211110000 000000011112333344
Q ss_pred CCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcc
Q 005749 107 PSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTA 186 (679)
Q Consensus 107 ~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~ 186 (679)
..|++. ..|..+..+++|+.|+|++|.|. .+|..++++++|++|+|++|.|+ .+|+.+..+ ++|+.|+|++|+|+
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL-SNLRVLDLSHNRLT- 283 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG-TTCCEEECTTSCCS-
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC-CCCCEEeCcCCcCC-
Confidence 444444 45778999999999999999998 89999999999999999999999 788888765 89999999999999
Q ss_pred cCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccccc--cCEEEccCCcCCCCCCC
Q 005749 187 ALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLS--LEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 187 ~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--L~~l~ls~N~l~g~ip~ 264 (679)
.+|..+ ..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|+|.+|..+..++ +..++|++|.++|.+|.
T Consensus 284 ~lp~~~---~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 284 SLPAEL---GSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp SCCSSG---GGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred ccChhh---cCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 667654 56889999999999997 8899999999999999999999999999887653 34578999999999997
Q ss_pred cc
Q 005749 265 FS 266 (679)
Q Consensus 265 ~~ 266 (679)
..
T Consensus 360 ~l 361 (727)
T 4b8c_D 360 ER 361 (727)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 310
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.70 E-value=2.4e-17 Score=184.28 Aligned_cols=161 Identities=30% Similarity=0.399 Sum_probs=142.2
Q ss_pred CCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccc--cCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccC
Q 005749 97 SSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKG--TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRL 174 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g--~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L 174 (679)
...+++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..++.+++|++|||++|.+++.+|...+..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34578999999999999999999999999999999999997 6778899999999999999999987777655556899
Q ss_pred cEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcc-cccc-ccCEEE
Q 005749 175 VSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEG-LTRL-SLEKLN 252 (679)
Q Consensus 175 ~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l-~L~~l~ 252 (679)
+.|+|++|++++.+|... .++|++|++++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+ +|+.|+
T Consensus 402 ~~L~Ls~N~l~~~~~~~l-----~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 474 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCL-----PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIW 474 (520)
T ss_dssp CEEECCSSCCCGGGGGSC-----CTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CEEECcCCCCCcchhhhh-----cccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEE
Confidence 999999999998877543 158999999999999 89998889999999999999999 56665 6666 699999
Q ss_pred ccCCcCCCCCCC
Q 005749 253 LSHNNFSGVLPV 264 (679)
Q Consensus 253 ls~N~l~g~ip~ 264 (679)
+++|.+++..+.
T Consensus 475 l~~N~~~c~c~~ 486 (520)
T 2z7x_B 475 LHTNPWDCSCPR 486 (520)
T ss_dssp CCSSCBCCCHHH
T ss_pred CcCCCCcccCCc
Confidence 999999987653
No 311
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.70 E-value=2e-17 Score=172.16 Aligned_cols=162 Identities=20% Similarity=0.183 Sum_probs=113.8
Q ss_pred CccEEEEEcCCCCCcccCC----ccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCc--ChhhH-Hhh
Q 005749 98 SIHLLSIQLPSANLTGSLP----RELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGV--LAPSI-WNL 170 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip----~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~--~p~~~-~~~ 170 (679)
..+++.|+|++|.+++.+| ..+..+++|++|+|++|.|++..|..++.+++|++|||++|++.+. ++... ...
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4467788888888887665 3456788888888888888877777888888888888888887653 22222 123
Q ss_pred cccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCC---CCCCEEEccCCcccccCCccccccc
Q 005749 171 CDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRF---EALKELDISNNLFSGSIPEGLTRLS 247 (679)
Q Consensus 171 ~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~L~ls~N~l~g~~p~~~~~l~ 247 (679)
+++|++|+|++|+++...+....-...+++|++|+|++|++++.+|..+..+ ++|+.|+|++|+|+ .+|..+. .+
T Consensus 196 l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~ 273 (310)
T 4glp_A 196 FPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AK 273 (310)
T ss_dssp SCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SC
T ss_pred CCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CC
Confidence 4778888888888863211000000235678888888888887777777766 58888888888888 6677664 36
Q ss_pred cCEEEccCCcCCCC
Q 005749 248 LEKLNLSHNNFSGV 261 (679)
Q Consensus 248 L~~l~ls~N~l~g~ 261 (679)
|+.|+|++|+|++.
T Consensus 274 L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 274 LRVLDLSSNRLNRA 287 (310)
T ss_dssp CSCEECCSCCCCSC
T ss_pred CCEEECCCCcCCCC
Confidence 88888888888873
No 312
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.70 E-value=6.6e-17 Score=186.79 Aligned_cols=163 Identities=25% Similarity=0.267 Sum_probs=142.0
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..+.. +++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~-l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF-CTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT-CTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc-CCCCCEEE
Confidence 46899999999999877788999999999999999999988999999999999999999999654334555 58999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccc---cccCEEEccC
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTR---LSLEKLNLSH 255 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---l~L~~l~ls~ 255 (679)
|++|++++..|..+ ..+++|++|+|++|++++..|..++++++|++|++++|++++..|..+.. .+|+.|++++
T Consensus 104 L~~n~l~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~ 180 (680)
T 1ziw_A 104 LMSNSIQKIKNNPF---VKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 180 (680)
T ss_dssp CCSSCCCCCCSCTT---TTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTT
T ss_pred CCCCccCccChhHc---cccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCC
Confidence 99999987655433 56889999999999999998999999999999999999999877765543 2699999999
Q ss_pred CcCCCCCCCc
Q 005749 256 NNFSGVLPVF 265 (679)
Q Consensus 256 N~l~g~ip~~ 265 (679)
|++++..|..
T Consensus 181 n~l~~~~~~~ 190 (680)
T 1ziw_A 181 NQIKEFSPGC 190 (680)
T ss_dssp CCCCCBCTTG
T ss_pred CcccccChhh
Confidence 9999987754
No 313
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.69 E-value=6.2e-17 Score=170.10 Aligned_cols=155 Identities=21% Similarity=0.329 Sum_probs=110.3
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++.+..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|.++ .+|..++ ++|++|++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l 130 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRI 130 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEEC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEEC
Confidence 5777888888888777777888888888888888888777778888888888888888887 3555443 57888888
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCcccc--ccccccccCCCCCCEEEccCCcccccCCccccccccCEEEccCCc
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFS--GSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLNLSHNN 257 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~--g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~ 257 (679)
++|++++..+. .+ ..+++|++|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. -+|+.|++++|.
T Consensus 131 ~~n~i~~~~~~-~~--~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~ 204 (332)
T 2ft3_A 131 HDNRIRKVPKG-VF--SGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-ETLNELHLDHNK 204 (332)
T ss_dssp CSSCCCCCCSG-GG--SSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCCSSC
T ss_pred CCCccCccCHh-Hh--CCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc-CCCCEEECCCCc
Confidence 88888754332 11 35677888888888775 3556666666 77777777777764 555443 256777777777
Q ss_pred CCCCCCC
Q 005749 258 FSGVLPV 264 (679)
Q Consensus 258 l~g~ip~ 264 (679)
+++..|.
T Consensus 205 i~~~~~~ 211 (332)
T 2ft3_A 205 IQAIELE 211 (332)
T ss_dssp CCCCCTT
T ss_pred CCccCHH
Confidence 7766544
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=175.23 Aligned_cols=158 Identities=21% Similarity=0.230 Sum_probs=106.5
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++.+..+..|+++++|++|+|++|.|++..|..+.++++|++|+|++|++++..+..+.. +++|+.|+
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY-LSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS-CSSCCEEE
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc-cccCceee
Confidence 35888999999999988899999999999999999999877788999999999999999999654434444 58999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccc-cccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPE-FVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
|++|+++...+..+ ..+++|++|+|++|+..+.+|. .|..+++|+.|+|++|+++ .+|. +..+ +|+.|+|++|
T Consensus 143 L~~N~i~~~~~~~~---~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N 217 (440)
T 3zyj_A 143 LRNNPIESIPSYAF---NRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGN 217 (440)
T ss_dssp CCSCCCCEECTTTT---TTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTS
T ss_pred CCCCcccccCHHHh---hhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEECCCC
Confidence 99999996544322 2344555555554322222222 3444444444444444444 2332 2222 3444444444
Q ss_pred cCCCCC
Q 005749 257 NFSGVL 262 (679)
Q Consensus 257 ~l~g~i 262 (679)
+|++..
T Consensus 218 ~l~~~~ 223 (440)
T 3zyj_A 218 HLSAIR 223 (440)
T ss_dssp CCCEEC
T ss_pred ccCccC
Confidence 444433
No 315
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.69 E-value=6.7e-17 Score=191.20 Aligned_cols=163 Identities=20% Similarity=0.152 Sum_probs=115.3
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccC-CcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTI-PFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~i-p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..+.++++|++|+|++|.+++..|..+.++ ++|++|+
T Consensus 25 ~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 103 (844)
T 3j0a_A 25 TTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGL-FHLFELR 103 (844)
T ss_dssp TCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSC-SSCCCEE
T ss_pred CcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCC-cccCEee
Confidence 5777788888887777777888888888888887666666 5667778888888888888877666665554 7788888
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccc-ccccCCCCCCEEEccCCcccccCCcccccc---ccCEEEcc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKELDISNNLFSGSIPEGLTRL---SLEKLNLS 254 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l---~L~~l~ls 254 (679)
|++|.+++.+|... ....+++|++|+|++|++++..| ..++++++|++|+|++|++++..|..+..+ +|+.|+++
T Consensus 104 Ls~n~l~~~~~~~~-~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 104 LYFCGLSDAVLKDG-YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp CTTCCCSSCCSTTC-CCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred CcCCCCCcccccCc-cccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 88888777555421 12456778888888887776544 467777888888888887777666666543 46666666
Q ss_pred CCcCCCCCCC
Q 005749 255 HNNFSGVLPV 264 (679)
Q Consensus 255 ~N~l~g~ip~ 264 (679)
+|.+++.+|.
T Consensus 183 ~n~l~~~~~~ 192 (844)
T 3j0a_A 183 ANSLYSRVSV 192 (844)
T ss_dssp CSBSCCCCCC
T ss_pred CCcccccccc
Confidence 6666665554
No 316
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.69 E-value=8.9e-17 Score=177.61 Aligned_cols=166 Identities=22% Similarity=0.181 Sum_probs=144.6
Q ss_pred CCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 97 SSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
...+|+.|+|++|.+++..|..|+++++|++|+|++|.|++..+..+.++++|++|+|++|.+++..|..+..+ ++|+.
T Consensus 54 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~ 132 (477)
T 2id5_A 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL-YNLKS 132 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTC-TTCCE
T ss_pred CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcccc-ccCCE
Confidence 34579999999999999999999999999999999999996555568999999999999999998776666554 89999
Q ss_pred EEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccC
Q 005749 177 LRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSH 255 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~ 255 (679)
|+|++|++++..|..+ ..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+ +|+.|++++
T Consensus 133 L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 133 LEVGDNDLVYISHRAF---SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209 (477)
T ss_dssp EEECCTTCCEECTTSS---TTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEEC
T ss_pred EECCCCccceeChhhc---cCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCC
Confidence 9999999998766543 467899999999999997767789999999999999999998878778777 699999999
Q ss_pred CcCCCCCCCcc
Q 005749 256 NNFSGVLPVFS 266 (679)
Q Consensus 256 N~l~g~ip~~~ 266 (679)
|++.+.+|...
T Consensus 210 ~~~~~~~~~~~ 220 (477)
T 2id5_A 210 WPYLDTMTPNC 220 (477)
T ss_dssp CTTCCEECTTT
T ss_pred CccccccCccc
Confidence 99888887643
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.69 E-value=8.4e-17 Score=183.28 Aligned_cols=163 Identities=20% Similarity=0.119 Sum_probs=141.0
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..+..+ ++|++|+|
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP-KALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC-TTCCEEEC
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc-ccccEeec
Confidence 58999999999999889999999999999999999998889999999999999999999998777776665 89999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccC--EEEccCC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLE--KLNLSHN 256 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~--~l~ls~N 256 (679)
++|++++..|... ..+++|++|++++|++++..+..+..+++|+.|++++|++++..|..+..+ +|+ .|++++|
T Consensus 113 ~~n~i~~l~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 113 IQTGISSIDFIPL---HNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189 (606)
T ss_dssp TTSCCSCGGGSCC---TTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTC
T ss_pred cccCcccCCcchh---ccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCC
Confidence 9999997544332 578899999999999997433344459999999999999998888877777 577 8999999
Q ss_pred cCCCCCCCcc
Q 005749 257 NFSGVLPVFS 266 (679)
Q Consensus 257 ~l~g~ip~~~ 266 (679)
.+++..|...
T Consensus 190 ~l~~~~~~~~ 199 (606)
T 3t6q_A 190 DIAGIEPGAF 199 (606)
T ss_dssp CCCEECTTTT
T ss_pred ccCccChhHh
Confidence 9999887653
No 318
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.3e-16 Score=153.93 Aligned_cols=132 Identities=20% Similarity=0.270 Sum_probs=93.5
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCc-ccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEcc
Q 005749 102 LSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPF-ELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLH 180 (679)
Q Consensus 102 ~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls 180 (679)
+.+++++|++ +.+|..+.. +|++|+|++|+|++..|. .++.+++|++|+|++|+|++..|..+..+ ++|+.|+|+
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA-SHIQELQLG 86 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC-TTCCEEECC
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc-ccCCEEECC
Confidence 4567777777 467766544 788888888888755543 37778888888888888887666665554 778888888
Q ss_pred CCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCC
Q 005749 181 GNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIP 240 (679)
Q Consensus 181 ~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 240 (679)
+|+|++..|..+ ..+++|++|+|++|+|++.+|..+..+++|+.|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMF---LGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSS---TTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHh---cCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 887776655422 345677777777777777777777777777777777777776544
No 319
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.69 E-value=4.2e-17 Score=184.10 Aligned_cols=160 Identities=27% Similarity=0.368 Sum_probs=141.3
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccc--cCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCc
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKG--TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLV 175 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g--~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~ 175 (679)
..+++.|+|++|.+++.+|..++.+++|++|+|++|+|++ .+|..++.+++|++|+|++|.+++.+|...+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4578999999999999999999999999999999999996 45677899999999999999999877776555568999
Q ss_pred EEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcc-cccc-ccCEEEc
Q 005749 176 SLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEG-LTRL-SLEKLNL 253 (679)
Q Consensus 176 ~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l-~L~~l~l 253 (679)
.|+|++|++++.+|... .++|++|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+ +|+.|++
T Consensus 432 ~L~l~~n~l~~~~~~~l-----~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCL-----PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp EEECCSSCCCGGGGSSC-----CTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred EEECCCCCCCcchhhhh-----cCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 99999999998877532 158999999999999 78888889999999999999999 56665 6666 6999999
Q ss_pred cCCcCCCCCCC
Q 005749 254 SHNNFSGVLPV 264 (679)
Q Consensus 254 s~N~l~g~ip~ 264 (679)
++|.+++..|.
T Consensus 505 ~~N~~~c~c~~ 515 (562)
T 3a79_B 505 HDNPWDCTCPG 515 (562)
T ss_dssp CSCCBCCCHHH
T ss_pred cCCCcCCCcch
Confidence 99999998764
No 320
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.69 E-value=6.8e-17 Score=182.49 Aligned_cols=184 Identities=20% Similarity=0.214 Sum_probs=145.8
Q ss_pred CccEEEEEcCCCCCcccC--CccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCc
Q 005749 98 SIHLLSIQLPSANLTGSL--PRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLV 175 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~i--p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~ 175 (679)
..+++.|++++|++++.. |..+..+++|++|+|++|.+++ +|..+..+++|++|+|++|.+++..|...+..+++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-ccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 356888999999888654 7788899999999999999985 4445889999999999999998876644444458999
Q ss_pred EEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccc-ccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEc
Q 005749 176 SLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFS-GSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNL 253 (679)
Q Consensus 176 ~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~l 253 (679)
.|++++|.+++.+|..+ ..+++|++|++++|+++ +.+|..+..+++|+.|++++|++++..|..+..+ +|+.|++
T Consensus 425 ~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 501 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIF---NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501 (570)
T ss_dssp EEECTTSCCEECCTTTT---TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred EEeCcCCcccccchhhh---hcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeC
Confidence 99999999998776543 46789999999999998 6889999999999999999999998889888877 6999999
Q ss_pred cCCcCCCCCCCccc--CCCCcccccCCCCCCCCCC
Q 005749 254 SHNNFSGVLPVFSE--SKFGAEVFEGNSPALCGFP 286 (679)
Q Consensus 254 s~N~l~g~ip~~~~--~~~~~~~~~~n~~~~c~~p 286 (679)
++|++++..|.... .......+.+| +..|.+|
T Consensus 502 ~~n~l~~~~~~~~~~l~~L~~L~l~~N-~~~~~~~ 535 (570)
T 2z63_A 502 ASNQLKSVPDGIFDRLTSLQKIWLHTN-PWDCSCP 535 (570)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSS-CBCCCTT
T ss_pred CCCcCCCCCHHHhhcccCCcEEEecCC-cccCCCc
Confidence 99999988775432 12223334455 5555433
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.69 E-value=1.5e-16 Score=183.78 Aligned_cols=186 Identities=23% Similarity=0.218 Sum_probs=131.3
Q ss_pred CccEEEEEcCCCCCcccCC-ccccCCCCCCeeecccCccc--------------------------ccCCcccCCCCCCC
Q 005749 98 SIHLLSIQLPSANLTGSLP-RELGEFSMLQSLYLNVNSLK--------------------------GTIPFELGYSSSLS 150 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip-~~l~~l~~L~~L~L~~N~l~--------------------------g~ip~~l~~l~~L~ 150 (679)
..+++.|+|++|.+.+.+| ..+..+++|++|+|++|.++ +.+|..+..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 3467778888888877776 46777777777777777655 34566677788888
Q ss_pred EEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCC------CCCCCCccEEEccCccccccccccccCCCC
Q 005749 151 EIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALP------NSTCSDLQYLDLGSNKFSGSFPEFVTRFEA 224 (679)
Q Consensus 151 ~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~------~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~ 224 (679)
+|+|++|++++..+..+.. +++|+.|+|++|++++..+. .+| ...+++|++|+|++|+++...+..|..+++
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~-l~~L~~L~Ls~N~l~~~~~~-~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEG-LEKLEILDLQHNNLARLWKH-ANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp EEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCGGGGST-TSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred EEECCCCCCCcCChhhhcc-ccccCEEeCCCCCccccchh-hccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 8888888888654433444 47888888888888764321 111 245788999999999998433346888999
Q ss_pred CCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCCccc---CCCCcccccCCCCCCCCCC
Q 005749 225 LKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPVFSE---SKFGAEVFEGNSPALCGFP 286 (679)
Q Consensus 225 L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~~~~---~~~~~~~~~~n~~~~c~~p 286 (679)
|+.|+|++|+|++..+..+..+ +|+.|+|++|+|++..|.... .......+.+| |..|.++
T Consensus 562 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N-~~~c~c~ 626 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN-PFDCTCE 626 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC-CCCBCCC
T ss_pred cceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC-CcccCCc
Confidence 9999999999986555556665 699999999999987765321 33344455567 8888765
No 322
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.68 E-value=9.9e-17 Score=160.24 Aligned_cols=158 Identities=13% Similarity=0.173 Sum_probs=121.9
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCc-ccccCCcccCCCCCCCEEEccC-CCCCCcChhhHHhhcccCcEE
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNS-LKGTIPFELGYSSSLSEIDLSA-NLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~-l~g~ip~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~~~~~L~~L 177 (679)
+++.|+|++|++++..+..++.+++|++|+|++|. +++..+..+.++++|++|+|++ |.+++..+..+.. +++|+.|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~-l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKE-LPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEEC-CTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCC-CCCCCEE
Confidence 58889999999887777788899999999999997 8765555788899999999998 8888654334434 4889999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCcc---EEEccCc-cccccccccccCCCCCC-EEEccCCcccccCCccc-cccccCEE
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQ---YLDLGSN-KFSGSFPEFVTRFEALK-ELDISNNLFSGSIPEGL-TRLSLEKL 251 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~---~L~l~~N-~l~g~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~-~~l~L~~l 251 (679)
+|++|++++ +|. + ..+++|+ +|++++| ++++..+..|..+++|+ .|++++|+++ .+|... ...+|+.|
T Consensus 111 ~l~~n~l~~-lp~-~---~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L 184 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-L---TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAV 184 (239)
T ss_dssp EEEEECCCS-CCC-C---TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEE
T ss_pred eCCCCCCcc-ccc-c---ccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEE
Confidence 999999987 554 2 3455666 9999999 88866666788889999 9999999988 555543 33368899
Q ss_pred EccCCc-CCCCCCC
Q 005749 252 NLSHNN-FSGVLPV 264 (679)
Q Consensus 252 ~ls~N~-l~g~ip~ 264 (679)
++++|. +++..|.
T Consensus 185 ~L~~n~~l~~i~~~ 198 (239)
T 2xwt_C 185 YLNKNKYLTVIDKD 198 (239)
T ss_dssp ECTTCTTCCEECTT
T ss_pred EcCCCCCcccCCHH
Confidence 999994 8754443
No 323
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=1e-16 Score=154.55 Aligned_cols=133 Identities=27% Similarity=0.361 Sum_probs=89.1
Q ss_pred CeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEE
Q 005749 126 QSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLD 205 (679)
Q Consensus 126 ~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~ 205 (679)
++|++++|+|+ .+|..+.. +|++|+|++|++++..+...+..+++|+.|+|++|+|++..|..+ ..+++|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~ 84 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF---EGASHIQELQ 84 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTT---TTCTTCCEEE
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHc---CCcccCCEEE
Confidence 56777777775 56665543 677777777777765443333334677777777777776655433 3456777777
Q ss_pred ccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 206 LGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 206 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
|++|+|++..|..|..+++|++|+|++|+|++.+|..+..+ +|+.|+|++|.|++..+.
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 77777776666667777777777777777777777766666 577777777777776553
No 324
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=5e-17 Score=157.39 Aligned_cols=150 Identities=18% Similarity=0.181 Sum_probs=119.2
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|++. .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..+..+ ++|+.|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l-~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGL-TSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTC-TTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCC-CCCCEEEe
Confidence 4788999999988 677 7899999999999999775 34578889999999999999988666666664 89999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..|... ..+++|++|++++|++.+.+| .+..+++|+.|++++|++++ ++ .+..+ +|+.|++++|++
T Consensus 120 s~n~i~~~~~~~l---~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKI---NTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHH---TTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred cCCccCcHhHHHH---hhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 9999987555432 457889999999998434666 68889999999999999985 44 45555 699999999988
Q ss_pred CC
Q 005749 259 SG 260 (679)
Q Consensus 259 ~g 260 (679)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 65
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.68 E-value=3.6e-17 Score=181.11 Aligned_cols=151 Identities=19% Similarity=0.120 Sum_probs=102.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+|+.|+|++|.+++.. ..++|++|+|++|.|++..+. .+++|+.|+|++|.+++..|..+..+ ++|+.|+
T Consensus 80 ~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~ 150 (487)
T 3oja_A 80 STLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCR-SRVQYLD 150 (487)
T ss_dssp TTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGG-SSEEEEE
T ss_pred CCCCEEEecCCcCCCCC-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCC-CCCCEEE
Confidence 45778888888777432 237788888888888765443 35677888888888877666555554 7788888
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|.+++.+|..+. ..+++|++|+|++|.|++. |. +..+++|+.|+|++|+|++.+|. +..+ +|+.|+|++|.
T Consensus 151 Ls~N~l~~~~~~~l~--~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 151 LKLNEIDTVNFAELA--ASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNK 225 (487)
T ss_dssp CTTSCCCEEEGGGGG--GGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSC
T ss_pred CCCCCCCCcChHHHh--hhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCc
Confidence 888888776554331 1456788888888888755 22 33577788888888888764443 5555 57888888888
Q ss_pred CCCCCCC
Q 005749 258 FSGVLPV 264 (679)
Q Consensus 258 l~g~ip~ 264 (679)
|++ +|.
T Consensus 226 l~~-lp~ 231 (487)
T 3oja_A 226 LVL-IEK 231 (487)
T ss_dssp CCE-ECT
T ss_pred Ccc-cch
Confidence 876 443
No 326
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=2.1e-16 Score=179.65 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=119.5
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
..+|+.|+|++|.+++..|..|+.+++|++|+|++|.|++..|..++++++|++|+|++|.+++..|..+..+ ++|+.|
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L 176 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT-TSLQNL 176 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC-TTCCEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcC-CcCcEE
Confidence 4578999999999999888889999999999999999995444456899999999999999998776666554 899999
Q ss_pred EccCCCCcccCCCCCCCC-----------------------------------CCCCCccEEEccCccccccccccccCC
Q 005749 178 RLHGNSLTAALPEPALPN-----------------------------------STCSDLQYLDLGSNKFSGSFPEFVTRF 222 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~-----------------------------------~~~~~L~~L~l~~N~l~g~~p~~~~~l 222 (679)
+|++|.+++..+. .++. ...++|+.|+|++|++++ +..++.+
T Consensus 177 ~L~~N~l~~~~~~-~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l 253 (597)
T 3oja_B 177 QLSSNRLTHVDLS-LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNY 253 (597)
T ss_dssp ECTTSCCSBCCGG-GCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGC
T ss_pred ECcCCCCCCcChh-hhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccC
Confidence 9999999864211 1110 011245566666666654 3556777
Q ss_pred CCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCC
Q 005749 223 EALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 223 ~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
++|+.|+|++|.+++.+|..+..+ +|+.|+|++|.+++.
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l 293 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL 293 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC
Confidence 777777777777777777777666 577777777777763
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=179.23 Aligned_cols=163 Identities=20% Similarity=0.169 Sum_probs=143.3
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..+.+ +++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-LSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEEC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC-ccccccccc
Confidence 5889999999999888889999999999999999999877888999999999999999999866566655 489999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccc-cccccccCCCCCCEEEccCCcccccCCcccccc-cc----CEEEc
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG-SFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SL----EKLNL 253 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L----~~l~l 253 (679)
++|++++..+.. ...+++|++|++++|++++ .+|..++++++|+.|++++|++++..|..+..+ +| ..|++
T Consensus 108 ~~n~l~~l~~~~---~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 108 VETNLASLENFP---IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp TTSCCCCSTTCS---CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred cccccccCCCcc---ccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 999999754422 3578999999999999997 579999999999999999999998888877766 46 89999
Q ss_pred cCCcCCCCCCCcc
Q 005749 254 SHNNFSGVLPVFS 266 (679)
Q Consensus 254 s~N~l~g~ip~~~ 266 (679)
++|.+++..|...
T Consensus 185 ~~n~l~~~~~~~~ 197 (570)
T 2z63_A 185 SLNPMNFIQPGAF 197 (570)
T ss_dssp TTCCCCEECTTTT
T ss_pred CCCCceecCHHHh
Confidence 9999998877543
No 328
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.67 E-value=2.6e-16 Score=156.24 Aligned_cols=136 Identities=21% Similarity=0.213 Sum_probs=117.9
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..|..|+.+++|++|+|++|+|++..+..+..+++|++|+|++|+|++.. +..+..+++|+.|+|
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLP-SAVFDRLVHLKELFM 119 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC-TTTTTTCTTCCEEEC
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccC-hhHhCcchhhCeEec
Confidence 5889999999999999999999999999999999998555556789999999999999999754 444444589999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIP 240 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 240 (679)
++|+|+ .+|... ..+++|++|+|++|+|++..+..+..+++|+.|+|++|.+++..+
T Consensus 120 s~N~l~-~lp~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGI---ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTG---GGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCccc---ccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999 566543 467899999999999997766789999999999999999987654
No 329
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.67 E-value=5.5e-17 Score=169.40 Aligned_cols=147 Identities=22% Similarity=0.193 Sum_probs=87.0
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|++
T Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~------~~~L~~L~l 106 (317)
T 3o53_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV------GPSIETLHA 106 (317)
T ss_dssp GCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE------CTTCCEEEC
T ss_pred CCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC------CCCcCEEEC
Confidence 57788888888887777778888888888888888876554 7778888888888887775321 145666666
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccc-cc-ccCEEEccCCc
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLT-RL-SLEKLNLSHNN 257 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l-~L~~l~ls~N~ 257 (679)
++|++++..+. .+++|++|++++|++++..|..++.+++|+.|++++|++++..|..+. .+ +|+.|+|++|.
T Consensus 107 ~~n~l~~~~~~------~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 107 ANNNISRVSCS------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp CSSCCSEEEEC------CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred CCCccCCcCcc------ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 66666544332 123455555555555444444444444555555555555444333332 22 34444444444
Q ss_pred CCC
Q 005749 258 FSG 260 (679)
Q Consensus 258 l~g 260 (679)
+++
T Consensus 181 l~~ 183 (317)
T 3o53_A 181 IYD 183 (317)
T ss_dssp CCE
T ss_pred Ccc
Confidence 443
No 330
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.67 E-value=3.2e-16 Score=166.69 Aligned_cols=153 Identities=22% Similarity=0.133 Sum_probs=124.2
Q ss_pred EEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccC-CCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccC
Q 005749 103 SIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELG-YSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHG 181 (679)
Q Consensus 103 ~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~ 181 (679)
.+++++++++ .+|..+. +.|+.|+|++|+|++..+..+. ++++|++|+|++|+|++..+..+.. +++|+.|+|++
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP-VPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC-CCCCCEEECCC
Confidence 3456667766 4777654 4689999999999987777776 8999999999999999766555555 48999999999
Q ss_pred CCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccc---ccc-ccCEEEccCCc
Q 005749 182 NSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGL---TRL-SLEKLNLSHNN 257 (679)
Q Consensus 182 N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~l-~L~~l~ls~N~ 257 (679)
|+|++..+..+ ..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+ ..+ +|+.|+|++|+
T Consensus 98 N~l~~~~~~~~---~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~ 174 (361)
T 2xot_A 98 NHLHTLDEFLF---SDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNK 174 (361)
T ss_dssp SCCCEECTTTT---TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSC
T ss_pred CcCCcCCHHHh---CCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCC
Confidence 99997655332 467899999999999998889999999999999999999996444444 334 69999999999
Q ss_pred CCCCC
Q 005749 258 FSGVL 262 (679)
Q Consensus 258 l~g~i 262 (679)
|++..
T Consensus 175 l~~l~ 179 (361)
T 2xot_A 175 LKKLP 179 (361)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 99644
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.66 E-value=2.6e-16 Score=157.19 Aligned_cols=160 Identities=13% Similarity=0.074 Sum_probs=131.7
Q ss_pred CCccEEEEEcCCCC-CcccCCccccCCCCCCeeeccc-CcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccC
Q 005749 97 SSIHLLSIQLPSAN-LTGSLPRELGEFSMLQSLYLNV-NSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRL 174 (679)
Q Consensus 97 ~~~~l~~l~l~~n~-l~g~ip~~l~~l~~L~~L~L~~-N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L 174 (679)
...+++.|+|++|+ +++..+..|+.+++|++|+|++ |.|++..|..+.++++|++|+|++|.+++ +|. +.. +++|
T Consensus 53 ~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~-l~~L 129 (239)
T 2xwt_C 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTK-VYST 129 (239)
T ss_dssp TCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTT-CCBC
T ss_pred CCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccc-cccc
Confidence 34579999999998 6655555899999999999999 99997666788999999999999999998 554 444 4788
Q ss_pred c---EEEccCC-CCcccCCCCCCCCCCCCCcc-EEEccCccccccccccccCCCCCCEEEccCCc-ccccCCcccccc--
Q 005749 175 V---SLRLHGN-SLTAALPEPALPNSTCSDLQ-YLDLGSNKFSGSFPEFVTRFEALKELDISNNL-FSGSIPEGLTRL-- 246 (679)
Q Consensus 175 ~---~L~Ls~N-~l~~~~p~~~~~~~~~~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l-- 246 (679)
+ .|++++| ++++..+. .+ ..+++|+ +|++++|+++ .+|......++|+.|++++|+ +++..+..+..+
T Consensus 130 ~~L~~L~l~~N~~l~~i~~~-~~--~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~ 205 (239)
T 2xwt_C 130 DIFFILEITDNPYMTSIPVN-AF--QGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYS 205 (239)
T ss_dssp CSEEEEEEESCTTCCEECTT-TT--TTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSB
T ss_pred ccccEEECCCCcchhhcCcc-cc--cchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhcccc
Confidence 8 9999999 99875443 22 4678999 9999999999 677655455899999999995 997667777776
Q ss_pred ccCEEEccCCcCCCCCC
Q 005749 247 SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 247 ~L~~l~ls~N~l~g~ip 263 (679)
+|+.|++++|+|++..+
T Consensus 206 ~L~~L~l~~N~l~~l~~ 222 (239)
T 2xwt_C 206 GPSLLDVSQTSVTALPS 222 (239)
T ss_dssp CCSEEECTTCCCCCCCC
T ss_pred CCcEEECCCCccccCCh
Confidence 69999999999985433
No 332
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=5.8e-16 Score=166.44 Aligned_cols=111 Identities=19% Similarity=0.257 Sum_probs=81.3
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|.+.+..|..|+.+++|++|+|++|.+++..|..++.+++|++|+|++|.++. +|+.++..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEE
Confidence 467788888888877767788888888888888888887667777888888888888888874 4555444447888888
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG 213 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g 213 (679)
|++|++++..|..+ ..+++|++|++++|++++
T Consensus 148 L~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTF---QATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTT---SSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhc---cCCCCCCEEECCCCcCCc
Confidence 88888876555322 345666777777666664
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=3.7e-16 Score=163.97 Aligned_cols=155 Identities=21% Similarity=0.243 Sum_probs=104.3
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCeeecccCccc--ccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 102 LSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLK--GTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 102 ~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~--g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+.|++++|.+.+..+..++++++|++|+|++|.++ |..|..+..+++|++|++++|.++. +|..+. ++|+.|+|
T Consensus 124 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~---~~L~~L~l 199 (330)
T 1xku_A 124 QELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP---PSLTELHL 199 (330)
T ss_dssp CEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC---TTCSEEEC
T ss_pred cEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc---ccCCEEEC
Confidence 33334444444333334455555555555555553 2444455555555555555555553 333221 45666666
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..|..+ ..+++|++|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+ +|+.|++++|+|
T Consensus 200 ~~n~l~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 200 DGNKITKVDAASL---KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp TTSCCCEECTGGG---TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred CCCcCCccCHHHh---cCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 6666665544322 45789999999999999888888999999999999999998 788888777 699999999999
Q ss_pred CCCCCC
Q 005749 259 SGVLPV 264 (679)
Q Consensus 259 ~g~ip~ 264 (679)
++..+.
T Consensus 276 ~~~~~~ 281 (330)
T 1xku_A 276 SAIGSN 281 (330)
T ss_dssp CCCCTT
T ss_pred CccChh
Confidence 976554
No 334
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.65 E-value=4.6e-16 Score=163.40 Aligned_cols=163 Identities=25% Similarity=0.340 Sum_probs=118.5
Q ss_pred CCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 97 SSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
...+++.|+|++|++++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+|++|.+++.. +..+..+++|+.
T Consensus 76 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~ 151 (332)
T 2ft3_A 76 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVP-KGVFSGLRNMNC 151 (332)
T ss_dssp TCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCC-SGGGSSCSSCCE
T ss_pred CCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccC-HhHhCCCccCCE
Confidence 3457999999999999988999999999999999999998 7887776 89999999999998654 443344589999
Q ss_pred EEccCCCCcc--cCCCCC-----------------CCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccc
Q 005749 177 LRLHGNSLTA--ALPEPA-----------------LPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSG 237 (679)
Q Consensus 177 L~Ls~N~l~~--~~p~~~-----------------~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 237 (679)
|++++|.++. ..|... +|....++|++|++++|++++..|..+..+++|+.|++++|++++
T Consensus 152 L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 152 IEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp EECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred EECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 9999999863 333211 111112456666667777666555666777777777777777776
Q ss_pred cCCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 238 SIPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 238 ~~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
..|..+..+ +|+.|+|++|+++ .+|.
T Consensus 232 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 232 IENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp CCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 555556555 5777777777776 4454
No 335
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.65 E-value=1e-16 Score=170.02 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=134.2
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChh-hHHhhcccCcE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAP-SIWNLCDRLVS 176 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~L~~ 176 (679)
..+++.|+|++|++++..|..|+++++|++|+|++|.|++..+..++.+++|++|+|++|.+++ +|. ..+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcE
Confidence 4579999999999999888899999999999999999995444448999999999999999996 444 33444589999
Q ss_pred EEccCCC-CcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccc-ccc-ccCEEEc
Q 005749 177 LRLHGNS-LTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGL-TRL-SLEKLNL 253 (679)
Q Consensus 177 L~Ls~N~-l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l-~L~~l~l 253 (679)
|++++|+ +++..|.. + ..+++|++|++++|++++..|..+..+++|++|++++|+++ .+|..+ ..+ +|+.|++
T Consensus 154 L~l~~n~~~~~~~~~~-~--~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L 229 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKD-F--AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLEL 229 (353)
T ss_dssp EEEEESSSCCEECTTT-T--TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEE
T ss_pred EECCCCccccccCHHH-c--cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEEC
Confidence 9999995 66544433 2 46789999999999999998999999999999999999996 445443 333 6999999
Q ss_pred cCCcCCCCCCC
Q 005749 254 SHNNFSGVLPV 264 (679)
Q Consensus 254 s~N~l~g~ip~ 264 (679)
++|.+++..+.
T Consensus 230 ~~n~l~~~~~~ 240 (353)
T 2z80_A 230 RDTDLDTFHFS 240 (353)
T ss_dssp ESCBCTTCCCC
T ss_pred CCCcccccccc
Confidence 99999986543
No 336
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.1e-16 Score=147.61 Aligned_cols=138 Identities=21% Similarity=0.146 Sum_probs=112.6
Q ss_pred ccEEEEEcCCCCCc-ccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLT-GSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~-g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|+|++|+++ |.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|.+++.+|..+.. +++|+.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCEE
Confidence 35899999999998 89999999999999999999999965 77899999999999999999876655444 4899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccc---ccccCCCCCCEEEccCCcccccCCcc
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFP---EFVTRFEALKELDISNNLFSGSIPEG 242 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~ls~N~l~g~~p~~ 242 (679)
+|++|++++..+... ...+++|++|++++|.+++..+ ..+..+++|+.|++++|.+. .+|..
T Consensus 101 ~Ls~N~l~~~~~~~~--l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEP--LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGG--GSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHH--HhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999987432111 1457789999999999986544 47888999999999999886 44543
No 337
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.64 E-value=3.4e-16 Score=163.41 Aligned_cols=150 Identities=21% Similarity=0.206 Sum_probs=78.2
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|++++..+. .+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..+..+...+++|+.|+|
T Consensus 100 ~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 344455555555443322 24555555566665555445455555556666666666555444444333355666666
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..+. ..+++|++|+|++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+ +|+.|++++|.+
T Consensus 177 ~~N~l~~~~~~-----~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 177 QYNFIYDVKGQ-----VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp TTSCCCEEECC-----CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCC
T ss_pred CCCcCcccccc-----cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCc
Confidence 66655543111 124455666666666553 3334555556666666666655 345444444 455666666655
Q ss_pred C
Q 005749 259 S 259 (679)
Q Consensus 259 ~ 259 (679)
+
T Consensus 250 ~ 250 (317)
T 3o53_A 250 H 250 (317)
T ss_dssp B
T ss_pred c
Confidence 5
No 338
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.64 E-value=3.2e-16 Score=175.41 Aligned_cols=143 Identities=29% Similarity=0.341 Sum_probs=123.2
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
..+++.|+|++|++++ ||. +.. +|++|+|++|.|++ +|. .+++|++|+|++|.|++ +|. .+++|+.|
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L 165 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVL 165 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEE
Confidence 3579999999999998 888 766 99999999999997 887 68999999999999997 655 35899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCC-------CEEEccCCcccccCCcccccc-ccC
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEAL-------KELDISNNLFSGSIPEGLTRL-SLE 249 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L-------~~L~ls~N~l~g~~p~~~~~l-~L~ 249 (679)
+|++|+|++ +|. +. ++|++|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+ +|+
T Consensus 166 ~Ls~N~L~~-lp~--l~----~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~ 233 (571)
T 3cvr_A 166 SVRNNQLTF-LPE--LP----ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTC 233 (571)
T ss_dssp ECCSSCCSC-CCC--CC----TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTE
T ss_pred ECCCCCCCC-cch--hh----CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCC
Confidence 999999998 665 32 78999999999999 7887 654 77 99999999999 688888777 699
Q ss_pred EEEccCCcCCCCCCCc
Q 005749 250 KLNLSHNNFSGVLPVF 265 (679)
Q Consensus 250 ~l~ls~N~l~g~ip~~ 265 (679)
.|+|++|.|++.+|..
T Consensus 234 ~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 234 TIILEDNPLSSRIRES 249 (571)
T ss_dssp EEECCSSSCCHHHHHH
T ss_pred EEEeeCCcCCCcCHHH
Confidence 9999999999998864
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.64 E-value=9.7e-16 Score=159.24 Aligned_cols=149 Identities=27% Similarity=0.416 Sum_probs=115.1
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++.+. ++ ++.+++|++|+|++|.+++ +| .+..+++|++|+|++|.+++. ++ +.. +++|+.|+
T Consensus 63 ~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~-l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAG-LSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTT-CTTCCEEE
T ss_pred CCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcC-CCCCCEEE
Confidence 3588888988888754 43 8888999999999998885 44 688888999999999988874 33 444 48899999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|++++..+ ...+++|++|+|++|++++ ++. +..+++|+.|++++|++++..+ +..+ +|+.|+|++|+
T Consensus 136 l~~n~l~~~~~-----l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 136 LDLNQITNISP-----LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CCSSCCCCCGG-----GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred CCCCccCcCcc-----ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 99998886543 2467788999999998885 343 7888889999999998885443 4455 68889999998
Q ss_pred CCCCCC
Q 005749 258 FSGVLP 263 (679)
Q Consensus 258 l~g~ip 263 (679)
+++..|
T Consensus 207 l~~~~~ 212 (308)
T 1h6u_A 207 ISDVSP 212 (308)
T ss_dssp CCBCGG
T ss_pred cCcccc
Confidence 887665
No 340
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.63 E-value=7e-16 Score=169.28 Aligned_cols=158 Identities=21% Similarity=0.194 Sum_probs=126.1
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCc-------------------------ccCCCCCCCEE
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPF-------------------------ELGYSSSLSEI 152 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~-------------------------~l~~l~~L~~L 152 (679)
..+|+.|+|++|++++..+..++.+++|++|+|++|.|++..+. .+..+++|++|
T Consensus 122 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp CTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 34677888888888765556677888888888888877743332 35567778888
Q ss_pred EccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccC
Q 005749 153 DLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISN 232 (679)
Q Consensus 153 ~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~ 232 (679)
+|++|++++. +.+.. +++|+.|+|++|++++..|..+ ..+++|++|+|++|++++..|..|..+++|+.|+|++
T Consensus 202 ~L~~n~l~~~--~~~~~-l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 275 (452)
T 3zyi_A 202 NLGMCNIKDM--PNLTP-LVGLEELEMSGNHFPEIRPGSF---HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH 275 (452)
T ss_dssp ECTTSCCSSC--CCCTT-CTTCCEEECTTSCCSEECGGGG---TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCCccccc--ccccc-cccccEEECcCCcCcccCcccc---cCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCC
Confidence 8888888864 34544 4899999999999998766543 4678999999999999998899999999999999999
Q ss_pred CcccccCCcccccc-ccCEEEccCCcCCCC
Q 005749 233 NLFSGSIPEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 233 N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
|+|++..+..+..+ +|+.|+|++|.+...
T Consensus 276 N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 276 NNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp SCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred CcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 99997777777776 699999999987644
No 341
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.63 E-value=2.4e-16 Score=177.19 Aligned_cols=161 Identities=17% Similarity=0.166 Sum_probs=138.2
Q ss_pred CCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCc-ChhhHHhhcccCc
Q 005749 97 SSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGV-LAPSIWNLCDRLV 175 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~L~ 175 (679)
...+++.|+|++|++++..|..|+.+++|++|+|++|.|++..|..++++++|++|+|++|.+++. +|+.+.. +++|+
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~-l~~L~ 126 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPN-LTNLQ 126 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTT-CTTCC
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhc-cCCcc
Confidence 345799999999999998889999999999999999999987777799999999999999999973 4555555 48999
Q ss_pred EEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccc-ccc-ccCEEEc
Q 005749 176 SLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGL-TRL-SLEKLNL 253 (679)
Q Consensus 176 ~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l-~L~~l~l 253 (679)
.|+|++|++.+.+|...+ ..+++|++|++++|++++.+|..++.+++|+.|++++|.+. .+|..+ ..+ +|+.|++
T Consensus 127 ~L~L~~n~~~~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L 203 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDF--AGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLEL 203 (549)
T ss_dssp EEEEEESSSCCEECTTTT--TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEE
T ss_pred EEECCCCccccccCHhhh--hcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEc
Confidence 999999996666664433 46889999999999999999999999999999999999986 455543 234 6999999
Q ss_pred cCCcCCCC
Q 005749 254 SHNNFSGV 261 (679)
Q Consensus 254 s~N~l~g~ 261 (679)
++|++++.
T Consensus 204 ~~n~l~~~ 211 (549)
T 2z81_A 204 RDTNLARF 211 (549)
T ss_dssp ESCBCTTC
T ss_pred cCCccccc
Confidence 99999985
No 342
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.2e-16 Score=168.53 Aligned_cols=134 Identities=12% Similarity=0.113 Sum_probs=94.8
Q ss_pred cCccccCCceEEEEEEeCCCCEEEEEEcccCccc-----Cc---------ccH--------HHHHHHHhccCCCCCccce
Q 005749 382 GQVIEKTTYGTAYKAKLADGATIALRLLREGSCK-----DR---------SSC--------LPVIRQLGKVRHENLIPLR 439 (679)
Q Consensus 382 ~~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~-----~~---------~~~--------~~Ei~~l~~l~H~nIv~l~ 439 (679)
+..||+|+||.||+|+..+|+.||||+++..... .. ... .+|...|.++.+..+....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 5789999999999999889999999997643110 00 011 2345555555443332111
Q ss_pred EEeeCCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-
Q 005749 440 AFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFF- 518 (679)
Q Consensus 440 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~- 518 (679)
-+.. ...++||||+++++|.++... .....++.|++.+|.|||+++ ||||||||.|||+++++
T Consensus 180 p~~~---~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 180 PIAQ---SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp EEEE---ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred eeec---cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 1111 134799999999888765421 123568899999999999988 99999999999998876
Q ss_pred ---------ceEEeeccccccc
Q 005749 519 ---------VSRLTEFGLDQLM 531 (679)
Q Consensus 519 ---------~~kl~DFGla~~~ 531 (679)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 4899999976543
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.62 E-value=2.1e-15 Score=156.69 Aligned_cols=148 Identities=24% Similarity=0.328 Sum_probs=125.7
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|++.. +| .+..+++|++|+|++|.+++ +|. +..+++|++|+|++|.+++. +.+..+ ++|+.|+|
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l-~~L~~L~l 114 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGL-QSIKTLDL 114 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTC-TTCCEEEC
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCC-CCCCEEEC
Confidence 58899999999874 55 69999999999999999995 554 99999999999999999974 455554 89999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++..+ ...+++|++|++++|++++..+ ++.+++|+.|++++|++++. |. +..+ +|+.|++++|++
T Consensus 115 ~~n~l~~~~~-----l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 115 TSTQITDVTP-----LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp TTSCCCCCGG-----GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred CCCCCCCchh-----hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCcc
Confidence 9999997432 2568899999999999996543 88999999999999999964 43 6666 699999999999
Q ss_pred CCCCC
Q 005749 259 SGVLP 263 (679)
Q Consensus 259 ~g~ip 263 (679)
++..|
T Consensus 186 ~~~~~ 190 (308)
T 1h6u_A 186 SDISP 190 (308)
T ss_dssp CCCGG
T ss_pred CcChh
Confidence 98665
No 344
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=6.4e-16 Score=142.29 Aligned_cols=128 Identities=23% Similarity=0.203 Sum_probs=103.1
Q ss_pred ccEEEEEcCCCCCc-ccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLT-GSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~-g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|++++|+++ +.+|..++.+++|++|+|++|.|++. ..++.+++|++|+|++|.+++.+|..+..+ ++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKC-PNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHC-TTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhC-CCCCEE
Confidence 35889999999998 89999999999999999999999965 778899999999999999998776655444 889999
Q ss_pred EccCCCCcccC-CCCCCCCCCCCCccEEEccCcccccccc---ccccCCCCCCEEEccC
Q 005749 178 RLHGNSLTAAL-PEPALPNSTCSDLQYLDLGSNKFSGSFP---EFVTRFEALKELDISN 232 (679)
Q Consensus 178 ~Ls~N~l~~~~-p~~~~~~~~~~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~ls~ 232 (679)
++++|++++.. +... ..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~---~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPL---KKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGG---GGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHH---hhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999988632 1211 456788888888888886554 4677888888888763
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.62 E-value=1.9e-15 Score=155.73 Aligned_cols=145 Identities=26% Similarity=0.346 Sum_probs=88.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++..| ++.+++|++|+|++|.+++ +| .+..+++|++|+|++|.+++. +.+..+ ++|+.|+|
T Consensus 69 ~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l-~~L~~L~l 141 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHL-PQLESLYL 141 (291)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGC-TTCCEEEC
T ss_pred CCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCC-CCCCEEEc
Confidence 46666676666665333 6666777777777776664 33 366666777777777766653 334333 66777777
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++. + ....+++|++|++++|++++..| +..+++|+.|++++|++++ +|. +..+ +|+.|++++|.+
T Consensus 142 ~~n~l~~~-~----~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 142 GNNKITDI-T----VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQEC 212 (291)
T ss_dssp CSSCCCCC-G----GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEE
T ss_pred cCCcCCcc-h----hhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcc
Confidence 77766653 1 11345666777777776665433 6666677777777776664 333 4444 466777777666
Q ss_pred CC
Q 005749 259 SG 260 (679)
Q Consensus 259 ~g 260 (679)
+.
T Consensus 213 ~~ 214 (291)
T 1h6t_A 213 LN 214 (291)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 346
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.61 E-value=2e-15 Score=155.52 Aligned_cols=146 Identities=25% Similarity=0.339 Sum_probs=124.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|++.. +| .++.+++|++|+|++|.+++. +. +..+++|++|+|++|.+++. +.+.. +++|+.|+|
T Consensus 47 ~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~--~~l~~-l~~L~~L~L 119 (291)
T 1h6t_A 47 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKDL--SSLKD-LKKLKSLSL 119 (291)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCG--GGGTT-CTTCCEEEC
T ss_pred cccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCCC--hhhcc-CCCCCEEEC
Confidence 48889999999874 44 589999999999999999964 44 99999999999999999973 44555 489999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++. +. ...+++|++|++++|++++. ..++.+++|+.|++++|++++..| +..+ +|+.|++++|.|
T Consensus 120 ~~n~i~~~-~~----l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 120 EHNGISDI-NG----LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp TTSCCCCC-GG----GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred CCCcCCCC-hh----hcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 99999974 21 24678999999999999964 678999999999999999997655 6666 699999999999
Q ss_pred CCC
Q 005749 259 SGV 261 (679)
Q Consensus 259 ~g~ 261 (679)
++.
T Consensus 191 ~~l 193 (291)
T 1h6t_A 191 SDL 193 (291)
T ss_dssp CBC
T ss_pred CCC
Confidence 874
No 347
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=1.8e-15 Score=153.50 Aligned_cols=145 Identities=22% Similarity=0.288 Sum_probs=114.8
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|+++ .+| .++.+++|++|+|++|.|++ +|. +..+++|++|+|++|++++. |+ +.. ++|+.|+|
T Consensus 42 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l-~~-~~~--~~L~~L~L 113 (263)
T 1xeu_A 42 GVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNL-NG-IPS--ACLSRLFL 113 (263)
T ss_dssp TCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCC-TT-CCC--SSCCEEEC
T ss_pred cCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCc-Cc-ccc--CcccEEEc
Confidence 4788889988887 466 78889999999999999985 444 88899999999999999873 33 222 68999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++. +. ...+++|++|+|++|++++. | .++.+++|+.|++++|++++. ..+..+ +|+.|++++|.+
T Consensus 114 ~~N~l~~~-~~----l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 114 DNNELRDT-DS----LIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp CSSCCSBS-GG----GTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEE
T ss_pred cCCccCCC-hh----hcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcc
Confidence 99999874 31 24678899999999999854 4 688889999999999999865 445555 689999999988
Q ss_pred CCC
Q 005749 259 SGV 261 (679)
Q Consensus 259 ~g~ 261 (679)
++.
T Consensus 185 ~~~ 187 (263)
T 1xeu_A 185 VNE 187 (263)
T ss_dssp ECC
T ss_pred cCC
Confidence 766
No 348
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.60 E-value=2e-15 Score=172.30 Aligned_cols=183 Identities=19% Similarity=0.181 Sum_probs=145.1
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCc-ccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPF-ELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.++..+++..+...+ ++..+..+++|+.++++.|++....+. .+.++.+|+.++++.|.+.+..+..+.. +++|+.|
T Consensus 397 ~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~-~~~L~~L 474 (635)
T 4g8a_A 397 ISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVL 474 (635)
T ss_dssp SCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT-CTTCCEE
T ss_pred hhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccc-chhhhhh
Confidence 467788888888765 556788999999999999988766554 4678899999999999999766554444 5899999
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
+|++|++...+++..+ ..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..+ +|+.|+|++|
T Consensus 475 ~Ls~N~~~~~~~~~~~--~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 552 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIF--TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552 (635)
T ss_dssp ECTTCEEGGGEECSCC--TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTS
T ss_pred hhhhcccccccCchhh--hhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCC
Confidence 9999986544332232 467899999999999999889999999999999999999998888888877 6999999999
Q ss_pred cCCCCCCCcccC---CCCcccccCCCCCCCCCC
Q 005749 257 NFSGVLPVFSES---KFGAEVFEGNSPALCGFP 286 (679)
Q Consensus 257 ~l~g~ip~~~~~---~~~~~~~~~n~~~~c~~p 286 (679)
+|++.+|..... ......+.+| |..|.+.
T Consensus 553 ~l~~~~~~~l~~l~~~L~~L~L~~N-p~~C~C~ 584 (635)
T 4g8a_A 553 HIMTSKKQELQHFPSSLAFLNLTQN-DFACTCE 584 (635)
T ss_dssp CCCBCCSSCTTCCCTTCCEEECTTC-CBCCSGG
T ss_pred cCCCCCHHHHHhhhCcCCEEEeeCC-CCcccCC
Confidence 999998875432 2233334566 8888653
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.60 E-value=5e-15 Score=167.45 Aligned_cols=147 Identities=26% Similarity=0.332 Sum_probs=126.5
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+|+.|+|++|.+.+..| ++.|++|+.|+|++|.|++ +| .+..+++|++|+|++|.|++. +.+..+ ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l-~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHL-PQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGC-TTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCC-CccCEEE
Confidence 468999999999997555 9999999999999999985 45 799999999999999999974 455554 8999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|+|++. + ....+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+ +|+.|+|++|.
T Consensus 138 Ls~N~l~~l-~----~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 138 LGNNKITDI-T----VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCSSCCCCC-G----GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEE
T ss_pred CCCCccCCc-h----hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCc
Confidence 999999975 2 12468899999999999998766 8999999999999999986 44 45666 69999999999
Q ss_pred CCCC
Q 005749 258 FSGV 261 (679)
Q Consensus 258 l~g~ 261 (679)
+++.
T Consensus 209 l~~~ 212 (605)
T 1m9s_A 209 CLNK 212 (605)
T ss_dssp EECC
T ss_pred CcCC
Confidence 9875
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.59 E-value=4.1e-15 Score=143.83 Aligned_cols=136 Identities=18% Similarity=0.235 Sum_probs=115.8
Q ss_pred cccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCC
Q 005749 118 ELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNST 197 (679)
Q Consensus 118 ~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 197 (679)
..+.+++|++|+|++|.++ .+| .+..+++|++|+|++|.++.. +.+.. +++|++|+|++|++++..|..+ ..
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~-l~~L~~L~l~~n~l~~~~~~~l---~~ 110 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISG-LSNLERLRIMGKDVTSDKIPNL---SG 110 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTT-CTTCCEEEEECTTCBGGGSCCC---TT
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhc-CCCCCEEEeECCccCcccChhh---cC
Confidence 3478899999999999999 778 789999999999999987643 45555 4899999999999998666543 46
Q ss_pred CCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCC
Q 005749 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVL 262 (679)
Q Consensus 198 ~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~i 262 (679)
+++|++|+|++|++++..|..++.+++|+.|++++|++.+.+| .+..+ +|+.|++++|.+++..
T Consensus 111 l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 111 LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT
T ss_pred CCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH
Confidence 8899999999999999889999999999999999998444666 46666 6999999999998743
No 351
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.58 E-value=4.9e-15 Score=167.82 Aligned_cols=117 Identities=26% Similarity=0.414 Sum_probs=67.6
Q ss_pred cCCCCCCCCCCcccccc--------eeecCCCCCcccCCCCCCccccccccCCCCccEEEEEcCCCCCcccCCccccCCC
Q 005749 52 LLSSWNISVPLCQWRGL--------KWISTNGSPLSCSDISLPQWANLSLYKDSSIHLLSIQLPSANLTGSLPRELGEFS 123 (679)
Q Consensus 52 ~l~~W~~~~~~C~w~Gv--------~c~~~~~~~l~c~~~~~~~~~~l~~~~~~~~~l~~l~l~~n~l~g~ip~~l~~l~ 123 (679)
..+.|..+.++|.|+|. .|...+...++|+......+ ... -..+++.|+|++|+++ .||. .++
T Consensus 11 ~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~l---p~~--l~~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 11 VWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTL---PDC--LPAHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCC---CSC--CCTTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcCcc---Chh--hCCCCcEEEecCCCCC-CCCC---cCC
Confidence 45668777789999774 23333344555654433211 110 1135777777777776 4665 467
Q ss_pred CCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcc
Q 005749 124 MLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTA 186 (679)
Q Consensus 124 ~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~ 186 (679)
+|++|+|++|+|+ .+|. .+++|++|+|++|.+++. |. .+++|+.|+|++|++++
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-~~----~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHL-PA----LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCC-CC----CCTTCCEEECCSSCCSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCC-CC----CCCCcCEEECCCCCCCc
Confidence 7777777777776 4655 456667777777766653 22 12455555555555553
No 352
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=8.9e-15 Score=141.00 Aligned_cols=125 Identities=27% Similarity=0.336 Sum_probs=82.6
Q ss_pred EEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCC
Q 005749 104 IQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNS 183 (679)
Q Consensus 104 l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~ 183 (679)
+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..+.++++|++|+|++|.+++..+..+.++ ++|+.|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l-~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM-TQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC-TTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCC-CCCCEEECCCCc
Confidence 455556555 5665543 57788888888887 677777777888888888888776544444443 677777777777
Q ss_pred CcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCccc
Q 005749 184 LTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 184 l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
|++..|..+ ..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTF---DGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTT---TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHh---CCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 776544322 34566777777777776544445666777777777777665
No 353
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=9.1e-15 Score=138.76 Aligned_cols=114 Identities=21% Similarity=0.227 Sum_probs=73.3
Q ss_pred CCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCcc
Q 005749 123 SMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQ 202 (679)
Q Consensus 123 ~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~ 202 (679)
++|++|+|++|+|++..+..++.+++|++|+|++|.+++..+..+.. +++|+.|+|++|++++..+.. + ..+++|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~-~--~~l~~L~ 103 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK-LTKLTILYLHENKLQSLPNGV-F--DKLTQLK 103 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTT-T--TTCTTCC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccC-CCccCEEECCCCCccccCHHH-h--hCCcccC
Confidence 57778888888877655555677777888888888777543332333 367777777777777543321 1 2455677
Q ss_pred EEEccCccccccccccccCCCCCCEEEccCCcccccCC
Q 005749 203 YLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIP 240 (679)
Q Consensus 203 ~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 240 (679)
+|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 104 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 104 ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77777777765444445667777777777777765544
No 354
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=9.4e-15 Score=138.64 Aligned_cols=133 Identities=22% Similarity=0.265 Sum_probs=109.3
Q ss_pred CCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEE
Q 005749 125 LQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYL 204 (679)
Q Consensus 125 L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L 204 (679)
.+.+++++|+++ .+|..+ .++|++|+|++|++++..+..+.. +++|++|+|++|++++..+. .+ ..+++|++|
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~-~~--~~l~~L~~L 81 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDK-LTQLTKLSLSQNQIQSLPDG-VF--DKLTKLTIL 81 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTT-TT--TTCTTCCEE
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcC-cccccEEECCCCcceEeChh-Hc--cCCCccCEE
Confidence 467889999998 677655 379999999999999754434444 58999999999999965443 22 467899999
Q ss_pred EccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 205 DLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 205 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
+|++|++++..+..+..+++|+.|++++|+|++..+..+..+ +|+.|+|++|.+++..|.
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999999998777778999999999999999996655556666 699999999999998773
No 355
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=1.5e-15 Score=142.91 Aligned_cols=135 Identities=21% Similarity=0.145 Sum_probs=113.3
Q ss_pred cCCCCCCeeecccCccc-ccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCC
Q 005749 120 GEFSMLQSLYLNVNSLK-GTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTC 198 (679)
Q Consensus 120 ~~l~~L~~L~L~~N~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 198 (679)
...++|++|+|++|.++ |.+|..+..+++|++|+|++|.+++. ..+.. +++|+.|+|++|++++.+|... ..+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~N~l~~~~~~~~---~~l 94 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPK-LPKLKKLELSENRIFGGLDMLA---EKL 94 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCC-CSSCCEEEEESCCCCSCCCHHH---HHC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhcc-CCCCCEEECcCCcCchHHHHHH---hhC
Confidence 34588999999999998 88999999999999999999999976 45555 4899999999999998655322 247
Q ss_pred CCccEEEccCcccccc-ccccccCCCCCCEEEccCCcccccCC---cccccc-ccCEEEccCCcCCC
Q 005749 199 SDLQYLDLGSNKFSGS-FPEFVTRFEALKELDISNNLFSGSIP---EGLTRL-SLEKLNLSHNNFSG 260 (679)
Q Consensus 199 ~~L~~L~l~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l-~L~~l~ls~N~l~g 260 (679)
++|++|+|++|++++. .+..+..+++|+.|++++|.+++..+ ..+..+ +|+.|++++|.+..
T Consensus 95 ~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 95 PNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp TTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred CCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 8999999999999963 23789999999999999999996555 366666 69999999998764
No 356
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=8.7e-16 Score=141.42 Aligned_cols=129 Identities=22% Similarity=0.205 Sum_probs=107.6
Q ss_pred CCCCCCeeecccCccc-ccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCC
Q 005749 121 EFSMLQSLYLNVNSLK-GTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCS 199 (679)
Q Consensus 121 ~l~~L~~L~L~~N~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 199 (679)
..++|+.|+|++|.++ |.+|..+..+++|++|+|++|.+++. +.+.. +++|+.|+|++|++++.+|... ..++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~n~i~~~~~~~~---~~l~ 88 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPK-LNKLKKLELSDNRVSGGLEVLA---EKCP 88 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCC-CTTCCEEECCSSCCCSCTHHHH---HHCT
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhc-CCCCCEEECCCCcccchHHHHh---hhCC
Confidence 4578999999999999 89999999999999999999999976 45545 4899999999999998655422 2478
Q ss_pred CccEEEccCcccccc-ccccccCCCCCCEEEccCCcccccCC---cccccc-ccCEEEccC
Q 005749 200 DLQYLDLGSNKFSGS-FPEFVTRFEALKELDISNNLFSGSIP---EGLTRL-SLEKLNLSH 255 (679)
Q Consensus 200 ~L~~L~l~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p---~~~~~l-~L~~l~ls~ 255 (679)
+|++|++++|++++. .|..++.+++|+.|++++|++++..+ ..+..+ +|+.|++++
T Consensus 89 ~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 89 NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999999999973 45889999999999999999997655 356665 688888764
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.57 E-value=3.3e-17 Score=184.15 Aligned_cols=156 Identities=25% Similarity=0.191 Sum_probs=104.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCc-------------ccccCCcccCCCC------------------
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNS-------------LKGTIPFELGYSS------------------ 147 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~-------------l~g~ip~~l~~l~------------------ 147 (679)
.++..|+|++|.+. .||++|++|++|+.|++++|. +.|.+|..+++++
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~ 427 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 427 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhh
Confidence 34566777877775 788888888888888887764 4555554443322
Q ss_pred --------------CCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccc
Q 005749 148 --------------SLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSG 213 (679)
Q Consensus 148 --------------~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g 213 (679)
.|+.|+|++|.|++ +|. +..+ ++|+.|+|++|+|+ .+|..+ ..+++|++|+|++|+|++
T Consensus 428 l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l-~~L~~L~Ls~N~l~-~lp~~~---~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 428 KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQL-LLVTHLDLSHNRLR-ALPPAL---AALRCLEVLQASDNALEN 500 (567)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGG-TTCCEEECCSSCCC-CCCGGG---GGCTTCCEEECCSSCCCC
T ss_pred hhhhcccccccCccCceEEEecCCCCCC-CcC-cccc-ccCcEeecCccccc-ccchhh---hcCCCCCEEECCCCCCCC
Confidence 46667777777776 443 4443 67777777777777 455432 356677777777777775
Q ss_pred cccccccCCCCCCEEEccCCcccccC-Ccccccc-ccCEEEccCCcCCCCCCC
Q 005749 214 SFPEFVTRFEALKELDISNNLFSGSI-PEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 214 ~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
+| .++.+++|+.|+|++|+|++.+ |..+..+ +|+.|+|++|+|++.+|.
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 56 6777777777777777777665 6666666 577777777777766553
No 358
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=139.51 Aligned_cols=128 Identities=20% Similarity=0.254 Sum_probs=109.7
Q ss_pred CeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEE
Q 005749 126 QSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLD 205 (679)
Q Consensus 126 ~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~ 205 (679)
+++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..+..+ ++|+.|+|++|+|++..+..+ ..+++|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l-~~L~~L~Ls~N~i~~i~~~~f---~~l~~L~~L~ 84 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNY-KHLTLIDLSNNRISTLSNQSF---SNMTQLLTLI 84 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGC-TTCCEEECCSSCCCCCCTTTT---TTCTTCCEEE
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcc-cCCCEEECCCCcCCEeCHhHc---cCCCCCCEEE
Confidence 58999999998 7887764 68999999999998 567666554 899999999999997655433 4678999999
Q ss_pred ccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcCCCC
Q 005749 206 LGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 206 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+ +|+.|+|++|.+...
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999998888899999999999999999996666667777 699999999988754
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.56 E-value=6e-15 Score=166.81 Aligned_cols=146 Identities=25% Similarity=0.360 Sum_probs=124.6
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+|+.|+|++|++.. +| .|+.|++|+.|+|++|.|++..| +..+++|+.|+|++|.|++. +.+.. +++|+.|+|
T Consensus 44 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~-l~~L~~L~L 116 (605)
T 1m9s_A 44 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKD-LKKLKSLSL 116 (605)
T ss_dssp TCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTT-CTTCCEEEC
T ss_pred CCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhcc-CCCCCEEEe
Confidence 47778888888864 44 69999999999999999997544 89999999999999999974 35555 489999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|+|++. +. ...+++|+.|+|++|+|++. ..++.+++|+.|+|++|+|++..| +..+ +|+.|+|++|+|
T Consensus 117 s~N~l~~l-~~----l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 117 EHNGISDI-NG----LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp TTSCCCCC-GG----GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred cCCCCCCC-cc----ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 99999973 31 24688999999999999965 678999999999999999998766 6666 699999999999
Q ss_pred CCC
Q 005749 259 SGV 261 (679)
Q Consensus 259 ~g~ 261 (679)
++.
T Consensus 188 ~~l 190 (605)
T 1m9s_A 188 SDL 190 (605)
T ss_dssp CBC
T ss_pred CCC
Confidence 985
No 360
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.56 E-value=5.6e-16 Score=179.48 Aligned_cols=153 Identities=22% Similarity=0.267 Sum_probs=120.5
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
..|+.|+|++|.+. .||..+..|++|++|+|++|.|+ .+|..++++++|++|||++|.|+ .+|..+..+ ++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC-FQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG-TTCSEEE
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC-CCCCEEE
Confidence 46889999999998 89999999999999999999999 89999999999999999999999 678888775 8999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCC-CCEEEccCCcccccCCccccccccCEEEccCC-
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEA-LKELDISNNLFSGSIPEGLTRLSLEKLNLSHN- 256 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~-L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N- 256 (679)
|++|.|+ .+|..+ ..+++|++|+|++|.|+|.+|..+..+.. +..|+|++|.++|.+|..+. .|++++|
T Consensus 300 L~~N~l~-~lp~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~-----~l~l~~n~ 370 (727)
T 4b8c_D 300 FFDNMVT-TLPWEF---GNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR-----FIEINTDG 370 (727)
T ss_dssp CCSSCCC-CCCSST---TSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred CCCCCCC-ccChhh---hcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc-----eeEeeccc
Confidence 9999998 567653 57889999999999999999988765432 23478999999999998654 4566666
Q ss_pred ---cCCCCCCC
Q 005749 257 ---NFSGVLPV 264 (679)
Q Consensus 257 ---~l~g~ip~ 264 (679)
...|.+|.
T Consensus 371 ~~~~~~~~l~~ 381 (727)
T 4b8c_D 371 EPQREYDSLQQ 381 (727)
T ss_dssp -----------
T ss_pred ccccccCCccc
Confidence 34444443
No 361
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.56 E-value=4e-14 Score=155.26 Aligned_cols=142 Identities=21% Similarity=0.248 Sum_probs=75.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|.+++. | ++++++|++|+|++|.|++ +| ++.+++|++|+|++|++++. + +.. +++|+.|++
T Consensus 86 ~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~-l~~L~~L~l 155 (457)
T 3bz5_A 86 NLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSH-NTQLTELDC 155 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTT-CTTCCEEEC
T ss_pred CCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--ccc-CCcCCEEEC
Confidence 455555555555542 2 5555555555555555553 33 45555555555555555542 1 222 244555555
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|+..+.++ ...+++|++|++++|++++ +| ++.+++|+.|++++|++++. + +..+ +|+.|++++|+|
T Consensus 156 ~~n~~~~~~~-----~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 156 HLNKKITKLD-----VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp TTCSCCCCCC-----CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCSEEECCSSCC
T ss_pred CCCCcccccc-----cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCCCCCEEECcCCcc
Confidence 5554333321 2345566666666666664 44 55666666666666666643 1 3333 466677777776
Q ss_pred CCCCC
Q 005749 259 SGVLP 263 (679)
Q Consensus 259 ~g~ip 263 (679)
++ +|
T Consensus 225 ~~-ip 228 (457)
T 3bz5_A 225 TE-ID 228 (457)
T ss_dssp SC-CC
T ss_pred cc-cC
Confidence 66 44
No 362
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.56 E-value=1.7e-15 Score=166.07 Aligned_cols=149 Identities=26% Similarity=0.300 Sum_probs=78.1
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCC-------------CEEEccCCCCCCcChh
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSL-------------SEIDLSANLFTGVLAP 165 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L-------------~~L~Ls~N~l~g~~p~ 165 (679)
.+++.|++++|++ |.||++|++|++|++|+|++|.++|.+|..++++.+| ++|++++|.+++. |.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 3588899999999 8999999999999999999999999999999887764 8888888888763 32
Q ss_pred hHHhhcccCcEEEccCCCCcccCCCCC---------------CCCCCCCCccEEEccCccccccccccccCCCCCCEEEc
Q 005749 166 SIWNLCDRLVSLRLHGNSLTAALPEPA---------------LPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDI 230 (679)
Q Consensus 166 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~---------------~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 230 (679)
..++|+.|++++|++++ +|... ++ ...++|++|++++|++++ +| .++.+++|++|++
T Consensus 89 ----~~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~-~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 89 ----LPPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALS-DLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp ----CCTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCC-SCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred ----CcCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCccc-CCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 12567777777777776 44311 00 001345555555555553 44 3555555555555
Q ss_pred cCCcccccCCccccccccCEEEccCCcCCC
Q 005749 231 SNNLFSGSIPEGLTRLSLEKLNLSHNNFSG 260 (679)
Q Consensus 231 s~N~l~g~~p~~~~~l~L~~l~ls~N~l~g 260 (679)
++|++++ +|..+. +|+.|++++|++++
T Consensus 161 ~~N~l~~-lp~~~~--~L~~L~L~~n~l~~ 187 (454)
T 1jl5_A 161 DNNSLKK-LPDLPP--SLEFIAAGNNQLEE 187 (454)
T ss_dssp CSSCCSC-CCCCCT--TCCEEECCSSCCSS
T ss_pred CCCcCcc-cCCCcc--cccEEECcCCcCCc
Confidence 5555553 443322 35555555555554
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.56 E-value=1.7e-14 Score=158.94 Aligned_cols=147 Identities=27% Similarity=0.388 Sum_probs=82.6
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|++++|.+.+..| ++.+++|+.|+|++|.+++ + +.+..+++|++|+|++|.+++..+ +.. +++|+.|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~-l~~L~~L~ 271 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSG-LTKLTELK 271 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTT-CTTCSEEE
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhc-CCCCCEEE
Confidence 356677777777766544 5666666666666666663 2 245566666666666666665432 333 35666666
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
+++|++++..+ ...+++|++|++++|++++..| ++.+++|+.|++++|++++..| +..+ +|+.|++++|+
T Consensus 272 l~~n~l~~~~~-----~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 272 LGANQISNISP-----LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CCSSCCCCCGG-----GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSC
T ss_pred CCCCccCcccc-----ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCc
Confidence 66666665332 1234556666666666554322 4555555666666555554443 2233 35555555555
Q ss_pred CCCC
Q 005749 258 FSGV 261 (679)
Q Consensus 258 l~g~ 261 (679)
+++.
T Consensus 343 l~~~ 346 (466)
T 1o6v_A 343 VSDV 346 (466)
T ss_dssp CCCC
T ss_pred cCCc
Confidence 5543
No 364
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.55 E-value=2.7e-14 Score=156.50 Aligned_cols=143 Identities=30% Similarity=0.380 Sum_probs=100.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|+|++|++++ +| +++++++|++|++++|++++ +|..+ .+|++|+|++|.+++ +| .+.. +++|+.|++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~-l~~L~~L~l 202 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQN-LPFLTAIYA 202 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTT-CTTCCEEEC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccC-CCCCCEEEC
Confidence 57777777777775 66 57777778888888877774 66543 477777888777776 44 4444 377888888
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccccccCEEEccCCcCC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLNLSHNNFS 259 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l~ 259 (679)
++|++++ +|.. ..+|++|++++|+++ .+|. ++.+++|+.|++++|++++ +|..+ .+|+.|++++|+++
T Consensus 203 ~~N~l~~-l~~~------~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 203 DNNSLKK-LPDL------PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLP--PSLEALNVRDNYLT 270 (454)
T ss_dssp CSSCCSS-CCCC------CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCC--TTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCC------cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccccc--cccCEEECCCCccc
Confidence 8887775 3321 247888888888887 6674 7778888888888888874 55433 25778888888877
Q ss_pred CCCCC
Q 005749 260 GVLPV 264 (679)
Q Consensus 260 g~ip~ 264 (679)
+ +|.
T Consensus 271 ~-l~~ 274 (454)
T 1jl5_A 271 D-LPE 274 (454)
T ss_dssp C-CCC
T ss_pred c-cCc
Confidence 6 443
No 365
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.55 E-value=1.8e-14 Score=152.11 Aligned_cols=156 Identities=26% Similarity=0.330 Sum_probs=77.2
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|++++|.+.+..+ ++.+++|++|++++|.+++ ++. +..+++|+.|++++|.+++..+ +.. +++|+.|+
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~-~~~L~~L~ 227 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VAN-MTRLNSLK 227 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGG-CTTCCEEE
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhc-CCcCCEEE
Confidence 356667777766654333 6666677777777766663 332 4555555555555555554322 222 24555555
Q ss_pred ccCCCCcccCCCCC-----------------CCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCc
Q 005749 179 LHGNSLTAALPEPA-----------------LPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPE 241 (679)
Q Consensus 179 Ls~N~l~~~~p~~~-----------------~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 241 (679)
+++|++++..+-.. -....+++|++|++++|++++. +.+..+++|+.|++++|++++..|.
T Consensus 228 l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 228 IGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred ccCCccCCCcchhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 55555554322000 0012334455555555554432 2344455555555555555544444
Q ss_pred ccccc-ccCEEEccCCcCCCCCC
Q 005749 242 GLTRL-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 242 ~~~~l-~L~~l~ls~N~l~g~ip 263 (679)
.+..+ +|+.|++++|++++..|
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCCGG
T ss_pred HhhccccCCEEEccCCccccccC
Confidence 44443 35555555555554444
No 366
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.55 E-value=1.5e-14 Score=159.33 Aligned_cols=149 Identities=29% Similarity=0.382 Sum_probs=121.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|++++|.+.+. +.+..+++|++|+|++|.+++..| +..+++|++|+|++|.+++.. + +.. +++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~-~~~-l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS-P-LAG-LTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG-G-GTT-CTTCSEEE
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccc-c-ccC-CCccCeEE
Confidence 4688999999998763 468889999999999999987554 888999999999999998753 3 444 48899999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNN 257 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~ 257 (679)
|++|++++..| ...+++|++|++++|++++..| +..+++|+.|++++|++++. + .+..+ +|+.|++++|+
T Consensus 294 L~~n~l~~~~~-----~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 294 LNENQLEDISP-----ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-S-SLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CCSSCCSCCGG-----GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSC
T ss_pred cCCCcccCchh-----hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-h-hhccCCCCCEEeCCCCc
Confidence 99999987544 2467889999999999987665 77889999999999999864 3 45555 69999999999
Q ss_pred CCCCCC
Q 005749 258 FSGVLP 263 (679)
Q Consensus 258 l~g~ip 263 (679)
+++.+|
T Consensus 365 l~~~~~ 370 (466)
T 1o6v_A 365 ISDLTP 370 (466)
T ss_dssp CCBCGG
T ss_pred cCccch
Confidence 998887
No 367
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.55 E-value=2.4e-14 Score=157.06 Aligned_cols=146 Identities=23% Similarity=0.204 Sum_probs=120.9
Q ss_pred CCccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcE
Q 005749 97 SSIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVS 176 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~ 176 (679)
...+++.|+|++|++++ +| ++.+++|++|+|++|.|++ +| ++.+++|++|++++|.+.+.++ +.. +++|+.
T Consensus 104 ~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~~~-l~~L~~ 174 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--VTP-QTQLTT 174 (457)
T ss_dssp TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--CTT-CTTCCE
T ss_pred CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc--ccc-CCcCCE
Confidence 34578999999999997 55 8999999999999999997 44 8889999999999997776663 444 489999
Q ss_pred EEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccC
Q 005749 177 LRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSH 255 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~ 255 (679)
|++++|++++ +| ...+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+ +|+.|++++
T Consensus 175 L~ls~n~l~~-l~-----l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 175 LDCSFNKITE-LD-----VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp EECCSSCCCC-CC-----CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred EECCCCccce-ec-----cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 9999999997 33 24678899999999999864 37888999999999999987 66 5555 699999999
Q ss_pred CcCCCCCC
Q 005749 256 NNFSGVLP 263 (679)
Q Consensus 256 N~l~g~ip 263 (679)
|+|++..+
T Consensus 243 N~l~~~~~ 250 (457)
T 3bz5_A 243 NPLTELDV 250 (457)
T ss_dssp SCCSCCCC
T ss_pred CcCCCcCH
Confidence 99998644
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.55 E-value=7.5e-15 Score=148.84 Aligned_cols=145 Identities=21% Similarity=0.275 Sum_probs=120.9
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.+++..+++++.. .+..+++|++|+|++|.|+ .+| .+..+++|++|+|++|++++.. + +.. +++|+.|+|
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~-~-l~~-l~~L~~L~L 92 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLS-P-LKD-LTKLEELSV 92 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTT-CSSCCEEEC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCCh-h-hcc-CCCCCEEEC
Confidence 3556678888887543 6889999999999999998 577 7889999999999999999754 4 555 589999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++. |... . ++|++|+|++|++++ +| .+..+++|+.|++++|++++. | .+..+ +|+.|++++|++
T Consensus 93 ~~N~l~~l-~~~~----~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 93 NRNRLKNL-NGIP----S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp CSSCCSCC-TTCC----C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred CCCccCCc-Cccc----c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 99999974 3221 2 789999999999996 44 589999999999999999964 4 46666 699999999999
Q ss_pred CCC
Q 005749 259 SGV 261 (679)
Q Consensus 259 ~g~ 261 (679)
++.
T Consensus 163 ~~~ 165 (263)
T 1xeu_A 163 TNT 165 (263)
T ss_dssp CBC
T ss_pred cch
Confidence 987
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.54 E-value=1.2e-14 Score=153.30 Aligned_cols=146 Identities=18% Similarity=0.264 Sum_probs=111.8
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.|++++|.+.+..+ ++.+++|++|+|++|.+++ +|. +..+++|++|+|++|.+++. +.+.. +++|+.|++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~l 272 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI--NAVKD-LTKLKMLNV 272 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTT-CTTCCEEEC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC--hhHhc-CCCcCEEEc
Confidence 34555555555554333 7778888888888888875 343 77888888888888888864 34444 478999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
++|++++. +. ...+++|++|++++|++++..|..++.+++|+.|++++|++++..| +..+ +|+.|++++|.|
T Consensus 273 ~~n~l~~~-~~----~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 273 GSNQISDI-SV----LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp CSSCCCCC-GG----GGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred cCCccCCC-hh----hcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 99988864 21 2467899999999999999999999999999999999999997766 5555 699999999998
Q ss_pred C
Q 005749 259 S 259 (679)
Q Consensus 259 ~ 259 (679)
+
T Consensus 346 ~ 346 (347)
T 4fmz_A 346 K 346 (347)
T ss_dssp -
T ss_pred c
Confidence 6
No 370
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.54 E-value=6.7e-16 Score=165.76 Aligned_cols=158 Identities=22% Similarity=0.325 Sum_probs=90.9
Q ss_pred ccEEEEEcCCCCCcc----cCCccccCCCCCCeeecccCcccccCCccc----CCC---------CCCCEEEccCCCCC-
Q 005749 99 IHLLSIQLPSANLTG----SLPRELGEFSMLQSLYLNVNSLKGTIPFEL----GYS---------SSLSEIDLSANLFT- 160 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g----~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l----~~l---------~~L~~L~Ls~N~l~- 160 (679)
.+|+.|+|++|.+.+ .+|..+..+++|++|+|++|.|++..+..+ ..+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 456666666666665 456666666666666666666653322222 222 66666666666665
Q ss_pred CcCh---hhHHhhcccCcEEEccCCCCc--c---cCCCCCCCCCCCCCccEEEccCcccc----ccccccccCCCCCCEE
Q 005749 161 GVLA---PSIWNLCDRLVSLRLHGNSLT--A---ALPEPALPNSTCSDLQYLDLGSNKFS----GSFPEFVTRFEALKEL 228 (679)
Q Consensus 161 g~~p---~~~~~~~~~L~~L~Ls~N~l~--~---~~p~~~~~~~~~~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L 228 (679)
+.++ ..+.. +++|+.|+|++|+++ | .+|... ..+++|++|+|++|+++ +.+|..+..+++|+.|
T Consensus 174 ~~~~~l~~~l~~-~~~L~~L~L~~n~l~~~g~~~l~~~~l---~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 174 GSMKEWAKTFQS-HRLLHTVKMVQNGIRPEGIEHLLLEGL---AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp GGHHHHHHHHHH-CTTCCEEECCSSCCCHHHHHHHHHTTG---GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred HHHHHHHHHHHh-CCCcCEEECcCCCCCHhHHHHHHHHHh---hcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 2222 12222 356666666666665 2 122111 24556777777777765 4566666667777777
Q ss_pred EccCCccccc----CCccccc--c-ccCEEEccCCcCCC
Q 005749 229 DISNNLFSGS----IPEGLTR--L-SLEKLNLSHNNFSG 260 (679)
Q Consensus 229 ~ls~N~l~g~----~p~~~~~--l-~L~~l~ls~N~l~g 260 (679)
+|++|++++. +|..+.. + +|+.|+|++|.+++
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 7777776654 4444421 2 46777777777766
No 371
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.54 E-value=2e-14 Score=152.06 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=110.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCc-ccCCCCCCCE-EEccCCCCCCcChhhHHhhcccCcEE
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPF-ELGYSSSLSE-IDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~-~l~~l~~L~~-L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
+++.|+|++|+++..-+..|++|++|++|+|++|.+.+.+|. .+.++++|.+ +++++|++++..|..+.. +++|++|
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~-l~~L~~L 109 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQN-LPNLQYL 109 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCC-CTTCCEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhh-ccccccc
Confidence 578899999998843334689999999999999998777775 4577877764 666778888654444434 4889999
Q ss_pred EccCCCCcccCCCCCCCC----------------------C-CCCCccEEEccCccccccccccccCCCCCCEEEccC-C
Q 005749 178 RLHGNSLTAALPEPALPN----------------------S-TCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISN-N 233 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~----------------------~-~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~-N 233 (679)
++++|++++..+...... . ....+++|+|++|+|+ .+|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCC
Confidence 999998886544321110 0 1135777888888887 4555555566788888875 4
Q ss_pred cccccCCc-ccccc-ccCEEEccCCcCCCC
Q 005749 234 LFSGSIPE-GLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 234 ~l~g~~p~-~~~~l-~L~~l~ls~N~l~g~ 261 (679)
.++ .+|. .+..+ +|+.|||++|+|+..
T Consensus 189 ~l~-~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 189 NLE-ELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp TCC-CCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred ccc-CCCHHHhccCcccchhhcCCCCcCcc
Confidence 454 5554 45555 688888888888754
No 372
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.54 E-value=5.1e-16 Score=163.14 Aligned_cols=153 Identities=25% Similarity=0.320 Sum_probs=69.0
Q ss_pred cEEEEEcCCCCCccc-CCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCC-CCCCc-ChhhHHhhcccCcE
Q 005749 100 HLLSIQLPSANLTGS-LPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSAN-LFTGV-LAPSIWNLCDRLVS 176 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~-ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N-~l~g~-~p~~~~~~~~~L~~ 176 (679)
+++.|+|++|++++. +|..+..+++|++|+|++|.+++.+|..++.+++|++|+|++| .+++. ++..+ ..+++|+.
T Consensus 94 ~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~-~~~~~L~~ 172 (336)
T 2ast_B 94 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL-SSCSRLDE 172 (336)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH-HHCTTCCE
T ss_pred CCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH-hcCCCCCE
Confidence 444555555554443 4444455555555555555554444444444555555555555 34432 22222 22245555
Q ss_pred EEccCC-CCccc-CCCCCCCCCCCC-CccEEEccCc--ccc-ccccccccCCCCCCEEEccCCc-ccccCCcccccc-cc
Q 005749 177 LRLHGN-SLTAA-LPEPALPNSTCS-DLQYLDLGSN--KFS-GSFPEFVTRFEALKELDISNNL-FSGSIPEGLTRL-SL 248 (679)
Q Consensus 177 L~Ls~N-~l~~~-~p~~~~~~~~~~-~L~~L~l~~N--~l~-g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l-~L 248 (679)
|+|++| .+++. ++... ..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+ +|
T Consensus 173 L~l~~~~~l~~~~~~~~~---~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L 249 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAV---AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 249 (336)
T ss_dssp EECCCCTTCCHHHHHHHH---HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred EcCCCCCCcChHHHHHHH---HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCC
Confidence 555555 44432 11100 1233 4555555555 233 3344444445555555555555 444444444443 35
Q ss_pred CEEEccCC
Q 005749 249 EKLNLSHN 256 (679)
Q Consensus 249 ~~l~ls~N 256 (679)
+.|++++|
T Consensus 250 ~~L~l~~~ 257 (336)
T 2ast_B 250 QHLSLSRC 257 (336)
T ss_dssp CEEECTTC
T ss_pred CEeeCCCC
Confidence 55555555
No 373
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.53 E-value=1.7e-15 Score=159.13 Aligned_cols=162 Identities=18% Similarity=0.206 Sum_probs=134.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCccccc-CCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGT-IPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~-ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|++++|.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+..+.. +++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEE
Confidence 3588999999999987765 67899999999999999976 8888999999999999999999887777766 5999999
Q ss_pred EccCC-CCccc-CCCCCCCCCCCCCccEEEccCc-ccccc-ccccccCCC-CCCEEEccCC--ccc-ccCCcccccc-cc
Q 005749 178 RLHGN-SLTAA-LPEPALPNSTCSDLQYLDLGSN-KFSGS-FPEFVTRFE-ALKELDISNN--LFS-GSIPEGLTRL-SL 248 (679)
Q Consensus 178 ~Ls~N-~l~~~-~p~~~~~~~~~~~L~~L~l~~N-~l~g~-~p~~~~~l~-~L~~L~ls~N--~l~-g~~p~~~~~l-~L 248 (679)
+|++| .+++. ++... ..+++|++|++++| ++++. ++..+..++ +|+.|++++| .++ +.+|..+..+ +|
T Consensus 148 ~L~~~~~l~~~~l~~~~---~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L 224 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLL---SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL 224 (336)
T ss_dssp ECTTCBSCCHHHHHHHH---HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTC
T ss_pred ECCCCCCCCHHHHHHHH---hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCC
Confidence 99999 68752 33211 34789999999999 99865 788899999 9999999999 565 5667766666 69
Q ss_pred CEEEccCCc-CCCCCCCc
Q 005749 249 EKLNLSHNN-FSGVLPVF 265 (679)
Q Consensus 249 ~~l~ls~N~-l~g~ip~~ 265 (679)
+.|++++|. +++..+..
T Consensus 225 ~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 225 VHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp SEEECTTCTTCCGGGGGG
T ss_pred CEEeCCCCCcCCHHHHHH
Confidence 999999999 77665543
No 374
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.52 E-value=1.7e-15 Score=162.51 Aligned_cols=164 Identities=20% Similarity=0.185 Sum_probs=131.7
Q ss_pred CccEEEEEcCCC---CCcccCCccc-------cCCCCCCeeecccCcccc----cCCcccCCCCCCCEEEccCCCCCCcC
Q 005749 98 SIHLLSIQLPSA---NLTGSLPREL-------GEFSMLQSLYLNVNSLKG----TIPFELGYSSSLSEIDLSANLFTGVL 163 (679)
Q Consensus 98 ~~~l~~l~l~~n---~l~g~ip~~l-------~~l~~L~~L~L~~N~l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~~ 163 (679)
..+++.|+|++| ++++.+|..+ ..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 346889999985 6778888776 789999999999999997 58888999999999999999997544
Q ss_pred hhhHHhhc------------ccCcEEEccCCCCc-ccCCCCCCCCCCCCCccEEEccCcccc--c---cccccccCCCCC
Q 005749 164 APSIWNLC------------DRLVSLRLHGNSLT-AALPEPALPNSTCSDLQYLDLGSNKFS--G---SFPEFVTRFEAL 225 (679)
Q Consensus 164 p~~~~~~~------------~~L~~L~Ls~N~l~-~~~p~~~~~~~~~~~L~~L~l~~N~l~--g---~~p~~~~~l~~L 225 (679)
+..+...+ ++|+.|+|++|+++ +.+|...-....+++|++|+|++|+++ | .+|..+..+++|
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L 218 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc
Confidence 44443332 79999999999998 333310000124678999999999998 3 455588899999
Q ss_pred CEEEccCCccc----ccCCcccccc-ccCEEEccCCcCCCC
Q 005749 226 KELDISNNLFS----GSIPEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 226 ~~L~ls~N~l~----g~~p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
+.|+|++|+++ +.+|..+..+ +|+.|+|++|.|++.
T Consensus 219 ~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 219 KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred cEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 99999999997 6788877776 699999999999876
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.5e-16 Score=154.09 Aligned_cols=148 Identities=20% Similarity=0.276 Sum_probs=119.5
Q ss_pred EEEEEcCCCCCcccCCc------cccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccC
Q 005749 101 LLSIQLPSANLTGSLPR------ELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRL 174 (679)
Q Consensus 101 l~~l~l~~n~l~g~ip~------~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L 174 (679)
++.+++..+++.|.+|. .++.+++|++|+|++|.|++ +| .+..+++|++|+|++|.++ .+|..+.. +++|
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~-~~~L 95 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTL 95 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH-HHHC
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc-CCcC
Confidence 55667777788888777 89999999999999999996 88 8899999999999999999 46665544 4899
Q ss_pred cEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccc-ccccCCCCCCEEEccCCcccccCCcc----------c
Q 005749 175 VSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFP-EFVTRFEALKELDISNNLFSGSIPEG----------L 243 (679)
Q Consensus 175 ~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~----------~ 243 (679)
+.|+|++|++++. |. ...+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.. +
T Consensus 96 ~~L~L~~N~l~~l-~~----~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 96 EELWISYNQIASL-SG----IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp SEEEEEEEECCCH-HH----HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CEEECcCCcCCcC-Cc----cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 9999999999973 31 1356789999999999985322 47889999999999999999887753 4
Q ss_pred ccc-ccCEEEccCCcCC
Q 005749 244 TRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 244 ~~l-~L~~l~ls~N~l~ 259 (679)
..+ +|+.|| +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 444 588776 56554
No 376
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.50 E-value=3.2e-15 Score=159.01 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=104.3
Q ss_pred cEEEEEcCCCCCcccCC----ccccCCC-CCCeeecccCcccccCCcccCCC-----CCCCEEEccCCCCCCcChhhHHh
Q 005749 100 HLLSIQLPSANLTGSLP----RELGEFS-MLQSLYLNVNSLKGTIPFELGYS-----SSLSEIDLSANLFTGVLAPSIWN 169 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip----~~l~~l~-~L~~L~L~~N~l~g~ip~~l~~l-----~~L~~L~Ls~N~l~g~~p~~~~~ 169 (679)
+++.|+|++|++++.-+ ..+..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|.+++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 37777888887776555 5667777 78888888888776666666554 77888888888877666555444
Q ss_pred hc----ccCcEEEccCCCCcccCCCCCCC-CCC-CCCccEEEccCccccc----cccccccCCC-CCCEEEccCCccccc
Q 005749 170 LC----DRLVSLRLHGNSLTAALPEPALP-NST-CSDLQYLDLGSNKFSG----SFPEFVTRFE-ALKELDISNNLFSGS 238 (679)
Q Consensus 170 ~~----~~L~~L~Ls~N~l~~~~p~~~~~-~~~-~~~L~~L~l~~N~l~g----~~p~~~~~l~-~L~~L~ls~N~l~g~ 238 (679)
.+ ++|+.|+|++|++++..+..... ... +++|++|+|++|++++ .++..+..++ +|+.|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 32 57788888888777543321100 001 2477788888887774 3344445555 778888888877765
Q ss_pred CCcccccc------ccCEEEccCCcCCC
Q 005749 239 IPEGLTRL------SLEKLNLSHNNFSG 260 (679)
Q Consensus 239 ~p~~~~~l------~L~~l~ls~N~l~g 260 (679)
.+..+... +|+.|+|++|.|++
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 55443321 57778888887765
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.46 E-value=2.2e-13 Score=154.24 Aligned_cols=148 Identities=30% Similarity=0.338 Sum_probs=71.6
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccC-----------------CCCCCCEEEccCCCCCCc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELG-----------------YSSSLSEIDLSANLFTGV 162 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~-----------------~l~~L~~L~Ls~N~l~g~ 162 (679)
++..|+|++|++++ +|.. +++|++|+|++|.|++ +|..+. .+++|+.|+|++|.+++
T Consensus 122 ~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 122 GLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-
T ss_pred CcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-
Confidence 45555555555543 4432 2555555555555553 222221 12667777777777765
Q ss_pred ChhhHHhhcccCcEEEccCCCCcccCCCCC---------------CCCCCCCCccEEEccCccccccccccccCCCCCCE
Q 005749 163 LAPSIWNLCDRLVSLRLHGNSLTAALPEPA---------------LPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKE 227 (679)
Q Consensus 163 ~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~---------------~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 227 (679)
+|.. +++|+.|++++|.++. +|... +| ..+++|++|+|++|+|+ .+|. .+++|+.
T Consensus 196 l~~~----~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~L~~lp-~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~ 265 (622)
T 3g06_A 196 LPTL----PSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTSLP-VLPSELKELMVSGNRLT-SLPM---LPSGLLS 265 (622)
T ss_dssp CCCC----CTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCC-CCCTTCCEEECCSSCCS-CCCC---CCTTCCE
T ss_pred CCCc----cchhhEEECcCCcccc-cCCCCCCCCEEEccCCccCcCC-CCCCcCcEEECCCCCCC-cCCc---ccccCcE
Confidence 3321 1345555555554442 22100 00 12344555555555555 3443 3455555
Q ss_pred EEccCCcccccCCcccccc-ccCEEEccCCcCCCCCCC
Q 005749 228 LDISNNLFSGSIPEGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 228 L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
|+|++|+|+ .+|..+..+ +|+.|+|++|.|++.+|.
T Consensus 266 L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 266 LSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp EECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred EeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 555555555 445555544 355555555555555443
No 378
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=3.8e-14 Score=134.40 Aligned_cols=130 Identities=15% Similarity=0.204 Sum_probs=89.3
Q ss_pred ccEEEEEcCCCCCcccCCccccCCC-CCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFS-MLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSL 177 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~-~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L 177 (679)
.+++.|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..++.+++|++|+|++|.+++. |+.++..+++|+.|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRI-GEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEE-CSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccccc-CcchhhcCCCCCEE
Confidence 35788888888887 4543 55544 888888888888854 5677788888888888888754 44443444788888
Q ss_pred EccCCCCcccCCCCCCCCCCCCCccEEEccCcccccccccc----ccCCCCCCEEEccCCccc
Q 005749 178 RLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEF----VTRFEALKELDISNNLFS 236 (679)
Q Consensus 178 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~----~~~l~~L~~L~ls~N~l~ 236 (679)
+|++|+++. +|.. -....+++|++|++++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 94 ~L~~N~i~~-~~~~-~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLVE-LGDL-DPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCCC-GGGG-GGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCCc-chhh-HhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888854 3320 01134667777888777776 45553 777777777777777765
No 379
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=1.2e-13 Score=130.82 Aligned_cols=133 Identities=17% Similarity=0.157 Sum_probs=108.6
Q ss_pred ccccCCCCCCeeecccCcccccCCcccCCC-CCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCC
Q 005749 117 RELGEFSMLQSLYLNVNSLKGTIPFELGYS-SSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPN 195 (679)
Q Consensus 117 ~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l-~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~ 195 (679)
+.+..+++|+.|+|++|+|+ .+|. +..+ ++|++|||++|.+++. +.+.. +++|+.|+|++|++++..+. .+
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~-l~~L~~L~Ls~N~l~~~~~~-~~-- 84 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPL-LRRLKTLLVNNNRICRIGEG-LD-- 84 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCC-CSSCCEEECCSSCCCEECSC-HH--
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--ccccc-CCCCCEEECCCCcccccCcc-hh--
Confidence 35678899999999999999 5665 4444 4999999999999975 45555 48999999999999975332 21
Q ss_pred CCCCCccEEEccCccccccccc--cccCCCCCCEEEccCCcccccCCcc----cccc-ccCEEEccCCcCC
Q 005749 196 STCSDLQYLDLGSNKFSGSFPE--FVTRFEALKELDISNNLFSGSIPEG----LTRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 196 ~~~~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~----~~~l-~L~~l~ls~N~l~ 259 (679)
..+++|++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+ +|+.||+++|.+.
T Consensus 85 ~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 85 QALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp HHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred hcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 35789999999999996 6776 8899999999999999998 56664 5555 6999999999865
No 380
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.45 E-value=1.7e-14 Score=153.34 Aligned_cols=162 Identities=19% Similarity=0.179 Sum_probs=127.4
Q ss_pred EEEcCCCCCcccCCccccCCCCCCeeecccCcccccCC----cccCCCC-CCCEEEccCCCCCCcChhhHHhh----ccc
Q 005749 103 SIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIP----FELGYSS-SLSEIDLSANLFTGVLAPSIWNL----CDR 173 (679)
Q Consensus 103 ~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip----~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~~----~~~ 173 (679)
.+.|+.|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|.+++..+..+... .++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35789999999999988888889999999999997665 6777888 99999999999998777766654 278
Q ss_pred CcEEEccCCCCcccCCCCCCC-CCCC-CCccEEEccCcccccccccccc----C-CCCCCEEEccCCcccccCC----cc
Q 005749 174 LVSLRLHGNSLTAALPEPALP-NSTC-SDLQYLDLGSNKFSGSFPEFVT----R-FEALKELDISNNLFSGSIP----EG 242 (679)
Q Consensus 174 L~~L~Ls~N~l~~~~p~~~~~-~~~~-~~L~~L~l~~N~l~g~~p~~~~----~-l~~L~~L~ls~N~l~g~~p----~~ 242 (679)
|+.|+|++|++++..+..... ...+ ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999754431100 0122 6899999999999976665543 3 3699999999999985433 33
Q ss_pred cccc--ccCEEEccCCcCCCCCCC
Q 005749 243 LTRL--SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 243 ~~~l--~L~~l~ls~N~l~g~ip~ 264 (679)
+... +|+.|+|++|++++..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~ 185 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCA 185 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHH
T ss_pred HhcCCccccEeeecCCCCchhhHH
Confidence 3332 699999999999877653
No 381
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.44 E-value=1.4e-13 Score=154.56 Aligned_cols=121 Identities=21% Similarity=0.174 Sum_probs=103.1
Q ss_pred CCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccE
Q 005749 124 MLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQY 203 (679)
Q Consensus 124 ~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~ 203 (679)
.|+.|+|++|.|++ +|. ++.+++|+.|+|++|.|+ .+|..+..+ ++|+.|+|++|+|++ +| .+ ..+++|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l-~~L~~L~Ls~N~l~~-lp-~l---~~l~~L~~ 512 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL-RCLEVLQASDNALEN-VD-GV---ANLPRLQE 512 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC-TTCCEEECCSSCCCC-CG-GG---TTCSSCCE
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC-CCCCEEECCCCCCCC-Cc-cc---CCCCCCcE
Confidence 59999999999996 786 999999999999999999 678877765 899999999999997 55 22 56889999
Q ss_pred EEccCccccccc-cccccCCCCCCEEEccCCcccccCCcccc---cc-ccCEEEc
Q 005749 204 LDLGSNKFSGSF-PEFVTRFEALKELDISNNLFSGSIPEGLT---RL-SLEKLNL 253 (679)
Q Consensus 204 L~l~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~~~---~l-~L~~l~l 253 (679)
|+|++|+|++.. |..++.+++|+.|+|++|+|++.+|.... .+ +|+.||+
T Consensus 513 L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 513 LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp EECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999999877 99999999999999999999977654321 12 5788764
No 382
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=6.1e-13 Score=125.29 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=53.3
Q ss_pred CeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEE
Q 005749 126 QSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLD 205 (679)
Q Consensus 126 ~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~ 205 (679)
+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|++..+. .+ ..+++|++|+
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l-~~L~~L~Ls~N~l~~l~~~-~f--~~l~~L~~L~ 84 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRL-TQLTRLDLDNNQLTVLPAG-VF--DKLTQLTQLS 84 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTC-TTCSEEECCSSCCCCCCTT-TT--TTCTTCCEEE
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCc-ccCCEEECCCCCcCccChh-hc--cCCCCCCEEE
Confidence 34455555554 3444332 445555555555554433333332 4455555555555533221 11 2345566666
Q ss_pred ccCccccccccccccCCCCCCEEEccCCccccc
Q 005749 206 LGSNKFSGSFPEFVTRFEALKELDISNNLFSGS 238 (679)
Q Consensus 206 l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 238 (679)
|++|+|++..+..|..+++|+.|+|++|.++..
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 666666644444566666777777777766643
No 383
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=1.1e-12 Score=124.15 Aligned_cols=103 Identities=19% Similarity=0.299 Sum_probs=55.3
Q ss_pred EEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCC
Q 005749 103 SIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGN 182 (679)
Q Consensus 103 ~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N 182 (679)
.+++++|++ +.+|..+. ++|++|+|++|.|++..|..++.+++|++|+|++|+|++. |+..+.
T Consensus 16 ~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~~~~~~------------- 78 (174)
T 2r9u_A 16 LVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAI-PTGVFD------------- 78 (174)
T ss_dssp EEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTTT-------------
T ss_pred EEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCcc-ChhHhC-------------
Confidence 455555555 35555443 5566666666666655555555566666666666665542 232222
Q ss_pred CCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCccc
Q 005749 183 SLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 183 ~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
.+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 79 --------------~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 79 --------------KLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp --------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred --------------CcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 2344555555555555333334556666666666666665
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.37 E-value=3e-15 Score=144.98 Aligned_cols=138 Identities=21% Similarity=0.217 Sum_probs=115.5
Q ss_pred cccCCCCCCeeecccCcccccCCc------ccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCC
Q 005749 118 ELGEFSMLQSLYLNVNSLKGTIPF------ELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEP 191 (679)
Q Consensus 118 ~l~~l~~L~~L~L~~N~l~g~ip~------~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~ 191 (679)
.+....+++.++|+.|.|+|.+|. .+..+++|++|+|++|.+++ +| .+..+ ++|+.|+|++|+++ .+|..
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l-~~L~~L~l~~n~l~-~l~~~ 88 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGM-ENLRILSLGRNLIK-KIENL 88 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHH-TTCCEEEEEEEEEC-SCSSH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccC-CCCCEEECCCCCcc-cccch
Confidence 366788999999999999999987 89999999999999999998 55 66665 89999999999998 44532
Q ss_pred CCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCC-cccccc-ccCEEEccCCcCCCCCCC
Q 005749 192 ALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIP-EGLTRL-SLEKLNLSHNNFSGVLPV 264 (679)
Q Consensus 192 ~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l-~L~~l~ls~N~l~g~ip~ 264 (679)
. ..+++|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+ +|+.|++++|.+++.+|.
T Consensus 89 ~---~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 89 D---AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp H---HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred h---hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 1 235789999999999996 56 68899999999999999985332 355555 699999999999988765
No 385
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.36 E-value=2.2e-12 Score=121.44 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=84.9
Q ss_pred EEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccC
Q 005749 102 LSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHG 181 (679)
Q Consensus 102 ~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~ 181 (679)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..+..+++|++|+|++|+|++. |+..+..+++|+.|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVL-PAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC-CTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCcc-ChhhccCCCCCCEEECCC
Confidence 34667777776 4777663 8899999999999988888899999999999999999965 444444458999999999
Q ss_pred CCCcccCCCCCCCCCCCCCccEEEccCccccccc
Q 005749 182 NSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSF 215 (679)
Q Consensus 182 N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~ 215 (679)
|+|++..+..+ ..+++|++|+|++|.++...
T Consensus 88 N~l~~~~~~~~---~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAF---DNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTT---TTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHh---cCCCCCCEEEeCCCCCCCCc
Confidence 99997554322 46789999999999998654
No 386
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=2.5e-12 Score=121.60 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=73.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
.+++.|+|++|++++..|..|+.+++|++|+|++|+|++..+..+..+++|++|||++|+|++. |+..+..+++|+.|+
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l-~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSI-PRGAFDNLKSLTHIY 111 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTTTTCTTCSEEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcccee-CHHHhccccCCCEEE
Confidence 4689999999999999999999999999999999999975555578999999999999999975 444333348888888
Q ss_pred ccCCCCcc
Q 005749 179 LHGNSLTA 186 (679)
Q Consensus 179 Ls~N~l~~ 186 (679)
|++|.+..
T Consensus 112 L~~N~~~c 119 (174)
T 2r9u_A 112 LYNNPWDC 119 (174)
T ss_dssp CCSSCBCT
T ss_pred eCCCCccc
Confidence 88888874
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.34 E-value=2.2e-12 Score=136.32 Aligned_cols=148 Identities=18% Similarity=0.128 Sum_probs=109.4
Q ss_pred CCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCc-EEEccCCCCcc
Q 005749 108 SANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLV-SLRLHGNSLTA 186 (679)
Q Consensus 108 ~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~-~L~Ls~N~l~~ 186 (679)
+++++ .||..+ .++|++|+|++|+|+...+..+.++++|++|||++|.+.+.+|+..+..+++|+ .+.+++|+++.
T Consensus 18 ~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~ 94 (350)
T 4ay9_X 18 ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 94 (350)
T ss_dssp STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCE
T ss_pred CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccc
Confidence 34444 577666 468999999999999533456899999999999999998888876655456665 57778899997
Q ss_pred cCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccC-CcccccCCcccccc--ccCEEEccCCcCCCC
Q 005749 187 ALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISN-NLFSGSIPEGLTRL--SLEKLNLSHNNFSGV 261 (679)
Q Consensus 187 ~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l--~L~~l~ls~N~l~g~ 261 (679)
..|..+ ..+++|++|++++|++++..+..+....++..|++++ |++....+..+..+ .++.|+|++|+|+..
T Consensus 95 l~~~~f---~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 95 INPEAF---QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp ECTTSB---CCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred cCchhh---hhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 666433 4678999999999999876665666666777888765 55654444445444 477788888888743
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.32 E-value=1.1e-13 Score=151.70 Aligned_cols=165 Identities=25% Similarity=0.198 Sum_probs=126.5
Q ss_pred ccEEEEEcCCCCCccc----CCccccCCCCCCeeecccCcccccC-----CcccCCCCCCCEEEccCCCCCCc----Chh
Q 005749 99 IHLLSIQLPSANLTGS----LPRELGEFSMLQSLYLNVNSLKGTI-----PFELGYSSSLSEIDLSANLFTGV----LAP 165 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~----ip~~l~~l~~L~~L~L~~N~l~g~i-----p~~l~~l~~L~~L~Ls~N~l~g~----~p~ 165 (679)
.+++.|+|++|++++. ++..+..+++|++|+|++|.+++.- +.....+++|++|+|++|.+++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 3799999999999874 7888899999999999999998642 22334689999999999999864 445
Q ss_pred hHHhhcccCcEEEccCCCCcccCCCCCCC--CCCCCCccEEEccCcccccc----ccccccCCCCCCEEEccCCcccccC
Q 005749 166 SIWNLCDRLVSLRLHGNSLTAALPEPALP--NSTCSDLQYLDLGSNKFSGS----FPEFVTRFEALKELDISNNLFSGSI 239 (679)
Q Consensus 166 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~--~~~~~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~~ 239 (679)
.+.. +++|+.|+|++|.+++..+..... ....++|++|+|++|.+++. +|..+..+++|+.|++++|++++..
T Consensus 279 ~l~~-~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 279 VLRA-KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHH-CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHhh-CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 5444 489999999999997532211000 01235899999999999865 6777888899999999999998765
Q ss_pred Cccccc------cccCEEEccCCcCCC----CCCC
Q 005749 240 PEGLTR------LSLEKLNLSHNNFSG----VLPV 264 (679)
Q Consensus 240 p~~~~~------l~L~~l~ls~N~l~g----~ip~ 264 (679)
+..+.. .+|+.|++++|.+++ .+|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 554432 269999999999986 5554
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.29 E-value=2.7e-13 Score=148.76 Aligned_cols=158 Identities=20% Similarity=0.230 Sum_probs=77.4
Q ss_pred cEEEEEcCCCCCcccCCcc-ccCCCCCCeeecccCcccc----cCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcc--
Q 005749 100 HLLSIQLPSANLTGSLPRE-LGEFSMLQSLYLNVNSLKG----TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCD-- 172 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~-l~~l~~L~~L~L~~N~l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~-- 172 (679)
+++.|+|++|+++...... +..+++|++|+|++|.+++ .+|..+..+++|++|||++|.+++..+..+...++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 3555666666555332222 4555666666666666553 24444555566666666666555433333333333
Q ss_pred --cCcEEEccCCCCcc----cCCCCCCCCCCCCCccEEEccCcccccccccccc-----CCCCCCEEEccCCcccccC--
Q 005749 173 --RLVSLRLHGNSLTA----ALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVT-----RFEALKELDISNNLFSGSI-- 239 (679)
Q Consensus 173 --~L~~L~Ls~N~l~~----~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~-----~l~~L~~L~ls~N~l~g~~-- 239 (679)
+|++|+|++|+++. .++... ..+++|++|+|++|.+++..+..+. ..++|+.|++++|++++..
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l---~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTL---RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHT---TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHH---ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 46666666665552 222211 2344566666666655543332222 1345556666666555422
Q ss_pred --Ccccccc-ccCEEEccCCcCCC
Q 005749 240 --PEGLTRL-SLEKLNLSHNNFSG 260 (679)
Q Consensus 240 --p~~~~~l-~L~~l~ls~N~l~g 260 (679)
+..+..+ +|+.|++++|.++.
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHHhhCCCCCEEECcCCCcch
Confidence 2222222 45555555555543
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=4.5e-11 Score=120.66 Aligned_cols=136 Identities=15% Similarity=0.101 Sum_probs=106.1
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCCccceEEeeCCCCceEEEEEecCCCCh
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENLIPLRAFYQGKRGEKLLIYDYFPSRTL 461 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL 461 (679)
..++.|+.+.||++... ++.+++|............+.+|+++++.+. |..+.++++++.+ .+..++||||++|.+|
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~lv~e~i~G~~l 97 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNLLMSEADGVLC 97 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCSSEEH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEEEEEecCCeeh
Confidence 45667788899999854 6899999987543334567999999999985 6677789988876 6788999999999998
Q ss_pred HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------
Q 005749 462 HDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH------------------------------------------- 498 (679)
Q Consensus 462 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------- 498 (679)
.+.+.. ......++.+++++|+.||+..
T Consensus 98 ~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 98 SEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 876421 1123478899999999999811
Q ss_pred -------------CCCeeecCCCCCCeeecCCCceEEeeccccc
Q 005749 499 -------------EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529 (679)
Q Consensus 499 -------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 529 (679)
...++|+|++|.||+++++..+.|.||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876666799998764
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=2.3e-11 Score=128.21 Aligned_cols=97 Identities=23% Similarity=0.153 Sum_probs=75.8
Q ss_pred CCcccCCccccCCCCCCeeeccc-CcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccC
Q 005749 110 NLTGSLPRELGEFSMLQSLYLNV-NSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAAL 188 (679)
Q Consensus 110 ~l~g~ip~~l~~l~~L~~L~L~~-N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~ 188 (679)
+|+ .||. |+.+++|+.|+|++ |.|++..|..++++++|++|||++|+|++..|..+.++ ++|+.|+|++|+|++.+
T Consensus 20 ~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~ 96 (347)
T 2ifg_A 20 ALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFT-PRLSRLNLSFNALESLS 96 (347)
T ss_dssp CCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSC-SCCCEEECCSSCCSCCC
T ss_pred CCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCC-cCCCEEeCCCCccceeC
Confidence 455 4888 99999999999996 99998777889999999999999999998766555554 88999999999998644
Q ss_pred CCCCCCCCCCCCccEEEccCccccc
Q 005749 189 PEPALPNSTCSDLQYLDLGSNKFSG 213 (679)
Q Consensus 189 p~~~~~~~~~~~L~~L~l~~N~l~g 213 (679)
+ ..+. .+ +|++|+|.+|.|..
T Consensus 97 ~-~~~~--~~-~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 97 W-KTVQ--GL-SLQELVLSGNPLHC 117 (347)
T ss_dssp S-TTTC--SC-CCCEEECCSSCCCC
T ss_pred H-HHcc--cC-CceEEEeeCCCccC
Confidence 3 3321 22 27777777777763
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=3.1e-11 Score=127.21 Aligned_cols=103 Identities=19% Similarity=0.222 Sum_probs=66.7
Q ss_pred eeecccC-cccccCCcccCCCCCCCEEEccC-CCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEE
Q 005749 127 SLYLNVN-SLKGTIPFELGYSSSLSEIDLSA-NLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYL 204 (679)
Q Consensus 127 ~L~L~~N-~l~g~ip~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L 204 (679)
.+++++| +|+ .||. +..+++|++|+|++ |+|++..+..+..+ ++|+.|+|++|+|++.+|..+ ..+++|++|
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~L 85 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGL-GELRNLTIVKSGLRFVAPDAF---HFTPRLSRL 85 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSC-CCCSEEECCSSCCCEECTTGG---GSCSCCCEE
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccc-cCCCEEECCCCccceeCHHHh---cCCcCCCEE
Confidence 4688887 888 4888 88888888888885 88887655444443 677777777777776544322 345566666
Q ss_pred EccCccccccccccccCCCCCCEEEccCCccc
Q 005749 205 DLGSNKFSGSFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 205 ~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
+|++|+|++..+..+..++ |+.|+|++|.|.
T Consensus 86 ~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 86 NLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp ECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred eCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6666666644333444443 666666666654
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.15 E-value=1.3e-12 Score=139.02 Aligned_cols=161 Identities=20% Similarity=0.172 Sum_probs=115.4
Q ss_pred cEEEEEcCCCCCcccCCccccCC-----CCCCeeecccCcccccCCccc-CCCCCCCEEEccCCCCCCcChhhHHhh---
Q 005749 100 HLLSIQLPSANLTGSLPRELGEF-----SMLQSLYLNVNSLKGTIPFEL-GYSSSLSEIDLSANLFTGVLAPSIWNL--- 170 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l-----~~L~~L~L~~N~l~g~ip~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~~--- 170 (679)
+++.|+|++|+++..-...|..+ ++|+.|+|++|.|+..-...+ ..+++|++|||++|.|+......+...
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 58899999999986544444333 799999999999975433333 345689999999999986543444332
Q ss_pred -cccCcEEEccCCCCcccCCCCCCC--CCCCCCccEEEccCcccccc----ccccccCCCCCCEEEccCCcccccC----
Q 005749 171 -CDRLVSLRLHGNSLTAALPEPALP--NSTCSDLQYLDLGSNKFSGS----FPEFVTRFEALKELDISNNLFSGSI---- 239 (679)
Q Consensus 171 -~~~L~~L~Ls~N~l~~~~p~~~~~--~~~~~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~~---- 239 (679)
.++|+.|+|++|.|+..-.. .+. ...+++|++|+|++|+|+.. ++..+...++|+.|+|++|+|++.-
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVA-VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHH-HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHH-HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 26799999999999752110 000 01356899999999999853 4566778889999999999998532
Q ss_pred Ccccccc-ccCEEEccCCcCCCC
Q 005749 240 PEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 240 p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
+..+... +|+.|+|++|.|+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 3333222 699999999998754
No 394
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=3.3e-10 Score=113.85 Aligned_cols=129 Identities=14% Similarity=0.162 Sum_probs=98.1
Q ss_pred ccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCC--ccceEEeeCCCCceEEEEEecCCCChHH
Q 005749 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENL--IPLRAFYQGKRGEKLLIYDYFPSRTLHD 463 (679)
Q Consensus 386 g~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI--v~l~~~~~~~~~~~~lv~ey~~~gsL~~ 463 (679)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+++.++ .+++++... .+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEEEecCCcccC-
Confidence 356669999998877889999997653 34678899999999965554 457887766 56789999999998884
Q ss_pred HhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 005749 464 LLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH--------------------------------------------- 498 (679)
Q Consensus 464 ~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--------------------------------------------- 498 (679)
... .+ ...++.++++.|..||+..
T Consensus 104 -~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 2357788888888888743
Q ss_pred ----------CCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 499 ----------EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 499 ----------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
...++|+|++|.||+++++..++|.|||.+..
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876678999998753
No 395
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.04 E-value=2.3e-11 Score=137.77 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=121.7
Q ss_pred CccEEEEEcCC-----------CCCccc-CCccccCCCCCCeeecccCcccccCCcccCC-CCCCCEEEcc----CCCCC
Q 005749 98 SIHLLSIQLPS-----------ANLTGS-LPRELGEFSMLQSLYLNVNSLKGTIPFELGY-SSSLSEIDLS----ANLFT 160 (679)
Q Consensus 98 ~~~l~~l~l~~-----------n~l~g~-ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~-l~~L~~L~Ls----~N~l~ 160 (679)
..+++.|+|.+ |.+++. ++.-+..+++|++|+|+.|.+++..+..++. +++|+.|+|+ .|.++
T Consensus 341 ~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~ 420 (592)
T 3ogk_B 341 CKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT 420 (592)
T ss_dssp CTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS
T ss_pred CCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc
Confidence 45699999993 566654 3334566999999999999999888877776 8999999996 78898
Q ss_pred Cc-----ChhhHHhhcccCcEEEccCC--CCcccCCCCCCCCCCCCCccEEEccCccccc-cccccccCCCCCCEEEccC
Q 005749 161 GV-----LAPSIWNLCDRLVSLRLHGN--SLTAALPEPALPNSTCSDLQYLDLGSNKFSG-SFPEFVTRFEALKELDISN 232 (679)
Q Consensus 161 g~-----~p~~~~~~~~~L~~L~Ls~N--~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ls~ 232 (679)
+. ++. +...+++|+.|+|+++ .+++..+.... ..+++|++|+|++|++++ .++..+..+++|+.|+|++
T Consensus 421 ~~p~~~~~~~-~~~~~~~L~~L~L~~~~~~l~~~~~~~~~--~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~ 497 (592)
T 3ogk_B 421 DLPLDNGVRS-LLIGCKKLRRFAFYLRQGGLTDLGLSYIG--QYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRG 497 (592)
T ss_dssp SCCCHHHHHH-HHHHCTTCCEEEEECCGGGCCHHHHHHHH--HSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEES
T ss_pred CchHHHHHHH-HHHhCCCCCEEEEecCCCCccHHHHHHHH--HhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccC
Confidence 74 322 2344589999999854 36644332111 236789999999999986 4566778899999999999
Q ss_pred CcccccC-Ccccccc-ccCEEEccCCcCCCC
Q 005749 233 NLFSGSI-PEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 233 N~l~g~~-p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
|.|++.. +..+..+ +|+.|+|++|++++.
T Consensus 498 n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 498 CCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 9997653 3333444 699999999999875
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.1e-09 Score=115.78 Aligned_cols=141 Identities=18% Similarity=0.224 Sum_probs=105.3
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcc--cCc-ccCcccHHHHHHHHhccC--CCCCccceEEeeCCC--CceEEEEEe
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLR--EGS-CKDRSSCLPVIRQLGKVR--HENLIPLRAFYQGKR--GEKLLIYDY 455 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~--~~~~lv~ey 455 (679)
+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+.. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 467889999999998764 578888876 432 123467899999999997 455778888877521 458999999
Q ss_pred cCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 005749 456 FPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH------------------------------------- 498 (679)
Q Consensus 456 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------- 498 (679)
++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9998775421 123678888999999999999999731
Q ss_pred ------------------CCCeeecCCCCCCeeecCCCc--eEEeecccccc
Q 005749 499 ------------------EIPITHGNVRSKNVLVDDFFV--SRLTEFGLDQL 530 (679)
Q Consensus 499 ------------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~ 530 (679)
...++|+|+++.|||+++++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999998875
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.96 E-value=6.4e-11 Score=134.05 Aligned_cols=164 Identities=13% Similarity=0.038 Sum_probs=121.2
Q ss_pred CCccEEEEEcCCCCCc-ccCCccccCCCCCCeeecc-----------cCccccc-CCcccCCCCCCCEEEccCCCCCCcC
Q 005749 97 SSIHLLSIQLPSANLT-GSLPRELGEFSMLQSLYLN-----------VNSLKGT-IPFELGYSSSLSEIDLSANLFTGVL 163 (679)
Q Consensus 97 ~~~~l~~l~l~~n~l~-g~ip~~l~~l~~L~~L~L~-----------~N~l~g~-ip~~l~~l~~L~~L~Ls~N~l~g~~ 163 (679)
...+++.|+|. +++. +.++..+..+++|++|+|+ .|.+++. ++.....+++|++|+|+.|.+++..
T Consensus 316 ~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~ 394 (592)
T 3ogk_B 316 KCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNES 394 (592)
T ss_dssp TCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHH
T ss_pred hCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHH
Confidence 34578899998 5554 4456566789999999999 4777754 3333456899999999999999877
Q ss_pred hhhHHhhcccCcEEEcc----CCCCcccCCCCCCC--CCCCCCccEEEccCc--cccccccccccC-CCCCCEEEccCCc
Q 005749 164 APSIWNLCDRLVSLRLH----GNSLTAALPEPALP--NSTCSDLQYLDLGSN--KFSGSFPEFVTR-FEALKELDISNNL 234 (679)
Q Consensus 164 p~~~~~~~~~L~~L~Ls----~N~l~~~~p~~~~~--~~~~~~L~~L~l~~N--~l~g~~p~~~~~-l~~L~~L~ls~N~ 234 (679)
+..+...+++|+.|+|+ .|.+++.+.+..++ ...+++|++|+++.| .+++..+..++. +++|+.|+|++|+
T Consensus 395 ~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~ 474 (592)
T 3ogk_B 395 LESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVG 474 (592)
T ss_dssp HHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCC
T ss_pred HHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCC
Confidence 77777756899999996 77887632110000 124789999999853 477666665554 8999999999999
Q ss_pred ccc-cCCcccccc-ccCEEEccCCcCCCC
Q 005749 235 FSG-SIPEGLTRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 235 l~g-~~p~~~~~l-~L~~l~ls~N~l~g~ 261 (679)
+++ .++..+..+ +|+.|+|++|.|++.
T Consensus 475 l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 475 ESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp SSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred CCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 986 345444444 699999999998765
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.93 E-value=4.6e-11 Score=127.00 Aligned_cols=139 Identities=18% Similarity=0.158 Sum_probs=102.4
Q ss_pred CCCCCeeecccCcccccCCccc----C-CCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCC--
Q 005749 122 FSMLQSLYLNVNSLKGTIPFEL----G-YSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALP-- 194 (679)
Q Consensus 122 l~~L~~L~L~~N~l~g~ip~~l----~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-- 194 (679)
+++|+.|+|++|.|+..-...+ . +.++|++|||++|.++..-...+...+++|+.|+|++|+|+.........
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4689999999999986433333 2 23799999999999986544555555679999999999997532111000
Q ss_pred CCCCCCccEEEccCccccc----cccccccCCCCCCEEEccCCccccc----CCcccccc-ccCEEEccCCcCCC
Q 005749 195 NSTCSDLQYLDLGSNKFSG----SFPEFVTRFEALKELDISNNLFSGS----IPEGLTRL-SLEKLNLSHNNFSG 260 (679)
Q Consensus 195 ~~~~~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l-~L~~l~ls~N~l~g 260 (679)
....++|++|+|++|.|+. .++..+...++|++|+|++|+|++. ++..+... +|+.|+|++|.|+.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 0124689999999999975 3556668899999999999999753 23444433 69999999999975
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=5e-09 Score=109.40 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=55.4
Q ss_pred cccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCC-EEEccCCcccccCCcccccc-cc
Q 005749 171 CDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALK-ELDISNNLFSGSIPEGLTRL-SL 248 (679)
Q Consensus 171 ~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l-~L 248 (679)
+++|+.|+|++|+++. +|...+ ..|.+|+.|+|.+| ++..-+..|..+++|+ .+++.+ +++..-+..|..+ +|
T Consensus 225 ~~~L~~l~L~~n~i~~-I~~~aF--~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L 299 (329)
T 3sb4_A 225 MPNLVSLDISKTNATT-IPDFTF--AQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNL 299 (329)
T ss_dssp CTTCCEEECTTBCCCE-ECTTTT--TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTE
T ss_pred cCCCeEEECCCCCcce-ecHhhh--hCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccC
Confidence 4677777777777763 444433 45677777777776 6544445677777777 777776 5654444556555 57
Q ss_pred CEEEccCCcCCC
Q 005749 249 EKLNLSHNNFSG 260 (679)
Q Consensus 249 ~~l~ls~N~l~g 260 (679)
+.|++++|+++.
T Consensus 300 ~~l~l~~n~i~~ 311 (329)
T 3sb4_A 300 RYVLATGDKITT 311 (329)
T ss_dssp EEEEECSSCCCE
T ss_pred CEEEeCCCccCc
Confidence 777777777653
No 400
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=9.5e-10 Score=113.58 Aligned_cols=184 Identities=14% Similarity=0.173 Sum_probs=120.3
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCC--ccceEEeeCCC--CceEEEEEecC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENL--IPLRAFYQGKR--GEKLLIYDYFP 457 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nI--v~l~~~~~~~~--~~~~lv~ey~~ 457 (679)
+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +..+ .+++.+..... ...|+||||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 468889999999863 56888886432 22457889999998884 3333 33444333211 23589999999
Q ss_pred CCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 005749 458 SRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH--------------------------------------- 498 (679)
Q Consensus 458 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--------------------------------------- 498 (679)
|.++.+.... .++..++..++.++++.|+.||+..
T Consensus 100 G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 9888754322 2677788888889998888888611
Q ss_pred ----------------CCCeeecCCCCCCeeecC--CCceEEeecccccccCcccccchhccc---------------cc
Q 005749 499 ----------------EIPITHGNVRSKNVLVDD--FFVSRLTEFGLDQLMVPAVADEMVALA---------------KA 545 (679)
Q Consensus 499 ----------------~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~~~~---------------gt 545 (679)
.+.++|+|++|.||++++ ...+.|.||+.+....+.. ...... ..
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~--Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN--DFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH--HHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH--HHHHHHhhccccCHHHHHHHHHH
Confidence 134799999999999998 5567899999886532210 000000 00
Q ss_pred ccccc-cccccccCCCCcchhHHHHHHHHHHHhCCCCC
Q 005749 546 DGYKA-PELQRMKKCSSRTDVYAFGILLLEILIGKKPG 582 (679)
Q Consensus 546 ~~y~a-PE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p~ 582 (679)
+++.. |+.... .....+.|+++.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01111 222111 112368999999999999998876
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=4e-08 Score=102.50 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=82.5
Q ss_pred CCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCcc-EEEccCccccccccccccCCCC
Q 005749 146 SSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQ-YLDLGSNKFSGSFPEFVTRFEA 224 (679)
Q Consensus 146 l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~-~L~l~~N~l~g~~p~~~~~l~~ 224 (679)
+++|+.|+|++|+++ .||+..+..+++|+.|+|++| ++. ++...+ ..|.+|+ .+++.+ +++..-+..|..+++
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~-I~~~aF--~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKT-IGQRVF--SNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCE-ECTTTT--TTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cce-ehHHHh--hCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 789999999999998 466666666799999999998 663 555544 5788999 999998 777555688999999
Q ss_pred CCEEEccCCcccccCCcccccc-ccCEEE
Q 005749 225 LKELDISNNLFSGSIPEGLTRL-SLEKLN 252 (679)
Q Consensus 225 L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ 252 (679)
|+.|++++|+++..-+..|..+ +|+.+.
T Consensus 299 L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 299 LRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 9999999999986656677766 687775
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=1.6e-08 Score=106.63 Aligned_cols=156 Identities=15% Similarity=0.217 Sum_probs=105.1
Q ss_pred cEEEEEcCCCCC---------cccCCccccCCCCCCeeecccCc-ccccCCcccCCCCCCCEEEccCCCCCCcChhhHHh
Q 005749 100 HLLSIQLPSANL---------TGSLPRELGEFSMLQSLYLNVNS-LKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWN 169 (679)
Q Consensus 100 ~l~~l~l~~n~l---------~g~ip~~l~~l~~L~~L~L~~N~-l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 169 (679)
+|+.|.+..+.. .+.++..+..+++|+.|+|++|. + .+|. +. +++|+.|+|..|.++......+..
T Consensus 140 ~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 140 HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 567777755433 23466677889999999999883 3 3444 43 889999999999886543333431
Q ss_pred -hcccCcEEEccC--CCCcccCCC----CCCCCCCCCCccEEEccCcccccccccccc---CCCCCCEEEccCCccccc-
Q 005749 170 -LCDRLVSLRLHG--NSLTAALPE----PALPNSTCSDLQYLDLGSNKFSGSFPEFVT---RFEALKELDISNNLFSGS- 238 (679)
Q Consensus 170 -~~~~L~~L~Ls~--N~l~~~~p~----~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~ls~N~l~g~- 238 (679)
.+++|+.|+|+. |...+.... ..+....+++|++|+|.+|.+.+..+..+. .+++|+.|+|+.|.|++.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 358999999863 322221100 011112467999999999999865544443 578999999999999864
Q ss_pred ---CCcccccc-ccCEEEccCCcCC
Q 005749 239 ---IPEGLTRL-SLEKLNLSHNNFS 259 (679)
Q Consensus 239 ---~p~~~~~l-~L~~l~ls~N~l~ 259 (679)
++..+..+ +|+.|+|++|.++
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHhhcccCCcceEEECCCCcCC
Confidence 34333333 6999999999876
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=1.7e-09 Score=108.44 Aligned_cols=82 Identities=24% Similarity=0.269 Sum_probs=42.7
Q ss_pred CCCCCCCEEEccCCCCCC--cChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccc----
Q 005749 144 GYSSSLSEIDLSANLFTG--VLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPE---- 217 (679)
Q Consensus 144 ~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~---- 217 (679)
.++++|+.|+|++|+|++ .+|..+.. +++|+.|+|++|+|++.-. .-....+ +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~-l~~L~~L~Ls~N~i~~~~~--l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y 242 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSERE--LDKIKGL-KLEELWLDGNSLCDTFRDQSTY 242 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHH-STTCCEEECTTSCCCSGGG--GGGGTTS-CCSEEECTTSTTGGGCSSHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhh-CCCCCEEECCCCccCCchh--hhhcccC-CcceEEccCCcCccccCcchhH
Confidence 345666666666666665 22222223 3666666666666664311 0000112 566666666666655542
Q ss_pred ---cccCCCCCCEEE
Q 005749 218 ---FVTRFEALKELD 229 (679)
Q Consensus 218 ---~~~~l~~L~~L~ 229 (679)
.+..+++|+.||
T Consensus 243 ~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 243 ISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHHCTTCCEES
T ss_pred HHHHHHHCcccCeEC
Confidence 345566666665
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.60 E-value=3.9e-09 Score=119.33 Aligned_cols=162 Identities=15% Similarity=0.111 Sum_probs=109.4
Q ss_pred CccEEEEEcCCCCCccc-CCccccCCCCCCeeec---------ccCcccccCCcccC-CCCCCCEEEccCCCCCCcChhh
Q 005749 98 SIHLLSIQLPSANLTGS-LPRELGEFSMLQSLYL---------NVNSLKGTIPFELG-YSSSLSEIDLSANLFTGVLAPS 166 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~-ip~~l~~l~~L~~L~L---------~~N~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~~p~~ 166 (679)
..+++.|++.+| +... ++.-...+++|++|+| +.|.+++.....+. .+++|+.|+++.|.+++..+..
T Consensus 313 ~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 313 CPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp CTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred CCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 457889999887 4432 3333446899999988 44566644333333 4789999999999998766666
Q ss_pred HHhhcccCcEEEcc--C----CCCcccCCCCCCC--CCCCCCccEEEccCccccccccccccC-CCCCCEEEccCCcccc
Q 005749 167 IWNLCDRLVSLRLH--G----NSLTAALPEPALP--NSTCSDLQYLDLGSNKFSGSFPEFVTR-FEALKELDISNNLFSG 237 (679)
Q Consensus 167 ~~~~~~~L~~L~Ls--~----N~l~~~~p~~~~~--~~~~~~L~~L~l~~N~l~g~~p~~~~~-l~~L~~L~ls~N~l~g 237 (679)
+...+++|+.|+|+ + |++++...+..++ ...+++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred HHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 66556899999999 4 5565321110000 12467899999977 677665566655 8889999999999876
Q ss_pred cCCccc-ccc-ccCEEEccCCcCCCC
Q 005749 238 SIPEGL-TRL-SLEKLNLSHNNFSGV 261 (679)
Q Consensus 238 ~~p~~~-~~l-~L~~l~ls~N~l~g~ 261 (679)
..+..+ ..+ +|+.|+|++|.+++.
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 554443 323 689999999988544
No 405
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.54 E-value=3.5e-09 Score=119.74 Aligned_cols=161 Identities=17% Similarity=0.160 Sum_probs=116.0
Q ss_pred ccEEEEEcCCCCCcccCC-ccccCCCCCCeeecccCcccc-cCCcccCCCCCCCEEEc---------cCCCCCCcChhhH
Q 005749 99 IHLLSIQLPSANLTGSLP-RELGEFSMLQSLYLNVNSLKG-TIPFELGYSSSLSEIDL---------SANLFTGVLAPSI 167 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip-~~l~~l~~L~~L~L~~N~l~g-~ip~~l~~l~~L~~L~L---------s~N~l~g~~p~~~ 167 (679)
.+++.|+|++|.+++... ..+..+++|++|+|++| ++. .++.....+++|++|+| +.|.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 579999999999876543 34678999999999998 543 23333346899999999 4466765444455
Q ss_pred HhhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEcc--C----ccccc-----cccccccCCCCCCEEEccCCccc
Q 005749 168 WNLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLG--S----NKFSG-----SFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 168 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~--~----N~l~g-----~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
...+++|+.|+++.|++++....... ..+++|+.|+++ + |++++ .++..+..+++|+.|+|++ +++
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~--~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIA--RNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHH--HHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHH--hhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 55468999999999999864332110 136789999999 4 66662 2334467889999999987 777
Q ss_pred ccCCccccc-c-ccCEEEccCCcCCCCCC
Q 005749 237 GSIPEGLTR-L-SLEKLNLSHNNFSGVLP 263 (679)
Q Consensus 237 g~~p~~~~~-l-~L~~l~ls~N~l~g~ip 263 (679)
+..+..+.. + +|+.|+|++|.+++..+
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 655555544 3 69999999999876533
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=1.2e-06 Score=89.32 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=59.5
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCC---CCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHE---NLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.|+.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l~g~ 95 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEecccC
Confidence 468999999999999989999999997654333456789999999999875 466676642 368999999998
Q ss_pred Ch
Q 005749 460 TL 461 (679)
Q Consensus 460 sL 461 (679)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 407
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=5.4e-07 Score=93.52 Aligned_cols=132 Identities=11% Similarity=0.102 Sum_probs=97.2
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCC---C-CCccceEEeeCCCCceEEEEEecCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRH---E-NLIPLRAFYQGKRGEKLLIYDYFPS 458 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H---~-nIv~l~~~~~~~~~~~~lv~ey~~~ 458 (679)
+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++||||++|
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme~i~G 111 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEECCCC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEeecCC
Confidence 46889999999998 6678888864321 13458899999988866 1 23344443 356899999999
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC---------------------------------------
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHE--------------------------------------- 499 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~--------------------------------------- 499 (679)
.++.+... ..++..++..++.++++.|+.||+...
T Consensus 112 ~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 112 ERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp BCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred cccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 88864332 125677777888888888888885432
Q ss_pred ---------------------CCeeecCCCCCCeeecCCCceEEeeccccccc
Q 005749 500 ---------------------IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLM 531 (679)
Q Consensus 500 ---------------------~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 531 (679)
+.++|+|++|.||+++++..+.|.||+.+...
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 22599999999999998766799999988653
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=5.6e-08 Score=92.41 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=73.8
Q ss_pred ccCCccccCCCCCCeeecccC-ccccc----CCcccCCCCCCCEEEccCCCCCCcChhhHHhh---cccCcEEEccCCCC
Q 005749 113 GSLPRELGEFSMLQSLYLNVN-SLKGT----IPFELGYSSSLSEIDLSANLFTGVLAPSIWNL---CDRLVSLRLHGNSL 184 (679)
Q Consensus 113 g~ip~~l~~l~~L~~L~L~~N-~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~---~~~L~~L~Ls~N~l 184 (679)
..+...+...++|++|+|++| .|... +...+...++|++|||++|.+...-...+... .++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 345556677888888898888 87632 44556667888899999988864311122211 25677888888777
Q ss_pred cccC----CCCCCCCCCCCCccEEEc--cCcccccc----ccccccCCCCCCEEEccCCccc
Q 005749 185 TAAL----PEPALPNSTCSDLQYLDL--GSNKFSGS----FPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 185 ~~~~----p~~~~~~~~~~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
+..- .... ...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 106 ~~~g~~~l~~~L---~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 106 SGSGILALVEAL---QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CHHHHHHHHHGG---GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CHHHHHHHHHHH---HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6420 0000 12346777777 66766632 3334445566777777777664
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.37 E-value=3e-08 Score=104.48 Aligned_cols=157 Identities=15% Similarity=0.159 Sum_probs=104.0
Q ss_pred CccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccC--CCCCCCEEEccC--CCCCCc-----ChhhHH
Q 005749 98 SIHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELG--YSSSLSEIDLSA--NLFTGV-----LAPSIW 168 (679)
Q Consensus 98 ~~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~--~l~~L~~L~Ls~--N~l~g~-----~p~~~~ 168 (679)
..+|+.|+|.+|.- -.+++ + .+++|++|+|..|.++......+. .+++|++|+|+. |...|. +.+.+.
T Consensus 171 ~P~L~~L~L~g~~~-l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNN-LSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBT-CBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCC-ceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 45789999988731 13444 4 389999999999988754434443 789999999964 332221 111111
Q ss_pred -hhcccCcEEEccCCCCcccCCCCCCCCCCCCCccEEEccCcccccc----ccccccCCCCCCEEEccCCcccccCCccc
Q 005749 169 -NLCDRLVSLRLHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGS----FPEFVTRFEALKELDISNNLFSGSIPEGL 243 (679)
Q Consensus 169 -~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 243 (679)
..+++|+.|+|++|.++...+........+++|++|+|+.|++++. ++..+..+++|+.|+|++|.++...-..+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 2247999999999999753321111112467999999999999864 44445567999999999999875432223
Q ss_pred cccccCEEEccCCc
Q 005749 244 TRLSLEKLNLSHNN 257 (679)
Q Consensus 244 ~~l~L~~l~ls~N~ 257 (679)
...-...++++.|+
T Consensus 328 ~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCCSEEECCSBC
T ss_pred HHHcCCEEEecCCc
Confidence 22113568998887
No 410
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=1.7e-06 Score=89.20 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=93.1
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCC---CCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHE---NLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+.+. .+.+.+.+.....+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45778888899987 56788888432 12245788999999999753 24456666643356789999999998
Q ss_pred ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 005749 460 TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTG------------------------------------------ 497 (679)
Q Consensus 460 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------------------------ 497 (679)
++.+.... .++..++..++.++++.|+.||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 88763211 134445555555555555555542
Q ss_pred ---------------CCCCeeecCCCCCCeeecC---CCc-eEEeecccccc
Q 005749 498 ---------------HEIPITHGNVRSKNVLVDD---FFV-SRLTEFGLDQL 530 (679)
Q Consensus 498 ---------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DFGla~~ 530 (679)
..+.++|+|+++.||++++ ++. +.|.||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1224699999999999997 455 48999998764
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.25 E-value=7.4e-07 Score=89.24 Aligned_cols=99 Identities=22% Similarity=0.252 Sum_probs=72.8
Q ss_pred EEcCCCC---CcccCCccccCCCCCCeeecccCcccc--cCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcc--cCcE
Q 005749 104 IQLPSAN---LTGSLPRELGEFSMLQSLYLNVNSLKG--TIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCD--RLVS 176 (679)
Q Consensus 104 l~l~~n~---l~g~ip~~l~~l~~L~~L~L~~N~l~g--~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~--~L~~ 176 (679)
++++.|. +.+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|||++|+|++. ..+..+ . +|+.
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l-~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKI-KGLKLEE 224 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGG-TTSCCSE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhc-ccCCcce
Confidence 5667774 233333333679999999999999998 6777788999999999999999986 334333 4 8999
Q ss_pred EEccCCCCcccCCCCC--C--CCCCCCCccEEE
Q 005749 177 LRLHGNSLTAALPEPA--L--PNSTCSDLQYLD 205 (679)
Q Consensus 177 L~Ls~N~l~~~~p~~~--~--~~~~~~~L~~L~ 205 (679)
|+|++|.+++.+|... . -...+++|+.||
T Consensus 225 L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 225 LWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999998766310 0 012356888876
No 412
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.23 E-value=4.6e-06 Score=87.69 Aligned_cols=81 Identities=9% Similarity=0.004 Sum_probs=56.8
Q ss_pred Ccc-ccCCceEEEEEEeC-------CCCEEEEEEcccCc---ccCcccHHHHHHHHhccCC---CCCccceEEeeCCC--
Q 005749 383 QVI-EKTTYGTAYKAKLA-------DGATIALRLLREGS---CKDRSSCLPVIRQLGKVRH---ENLIPLRAFYQGKR-- 446 (679)
Q Consensus 383 ~~i-g~G~~g~Vy~~~~~-------~~~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H---~nIv~l~~~~~~~~-- 446 (679)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+.. -.+.++++++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 77888999998764 26688888865432 1123678899999998853 24567777766521
Q ss_pred CceEEEEEecCCCChHH
Q 005749 447 GEKLLIYDYFPSRTLHD 463 (679)
Q Consensus 447 ~~~~lv~ey~~~gsL~~ 463 (679)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 45789999999876653
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.14 E-value=1.3e-05 Score=85.64 Aligned_cols=149 Identities=15% Similarity=0.160 Sum_probs=83.5
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+|+.+.|++ ++...-+..|.++++|+.++|++|+++ .||.....+++|+.++|..| ++ .|+...+..+++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CC-EECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hh-eehhhHhhCCCCCCEEec
Confidence 456666664 444333345666777777777776666 34443333455555555533 33 222222333344444444
Q ss_pred cC---------------------CCCcccCCCCCCCCCCCCCccEEEccCcccc-----ccccccccCCCCCCEEEccCC
Q 005749 180 HG---------------------NSLTAALPEPALPNSTCSDLQYLDLGSNKFS-----GSFPEFVTRFEALKELDISNN 233 (679)
Q Consensus 180 s~---------------------N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~ls~N 233 (679)
.+ |+++ .++...+ ..|++|+.+++.+|.+. ..-+..|..+++|+.++|. |
T Consensus 234 ~~~l~~I~~~aF~~~~L~~i~lp~~i~-~I~~~aF--~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 234 PENVSTIGQEAFRESGITTVKLPNGVT-NIASRAF--YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEETTCC-EECTTTT--TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CCCccCccccccccCCccEEEeCCCcc-EEChhHh--hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 33 2232 1222222 46788999988888765 2334568888888888888 4
Q ss_pred cccccCCcccccc-ccCEEEccCC
Q 005749 234 LFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 234 ~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
.++-.-...+..+ +|+.++|..|
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT
T ss_pred ceEEEhhhhhcCCCCccEEEECcc
Confidence 4663334455554 6888888655
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.14 E-value=7.1e-06 Score=86.53 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=55.5
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCC--CccceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHEN--LIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.++.|....+|+.+. ++..+++|..... ..+.+|..++..+.... +.++++++....+..++||||+++.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999886 5788899987542 35889999999886544 44567766653467899999999865
Q ss_pred hH
Q 005749 461 LH 462 (679)
Q Consensus 461 L~ 462 (679)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 415
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.13 E-value=1.1e-05 Score=81.29 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=93.5
Q ss_pred ccccCCce-EEEEEEeC-CCCEEEEEEcccCcccCcccHHHHHHHHhccC-CCCCccceEEeeCCCCceEEEEEecCCCC
Q 005749 384 VIEKTTYG-TAYKAKLA-DGATIALRLLREGSCKDRSSCLPVIRQLGKVR-HENLIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 384 ~ig~G~~g-~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.+..|..| .||+.... ++..+.+|+-... ....+.+|.+.|+.+. +--+-++++++.+ .+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCcc
Confidence 34445555 68988754 4678889986543 2346788999988874 2224567777776 578899999999988
Q ss_pred hHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 005749 461 LHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGH------------------------------------------ 498 (679)
Q Consensus 461 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------ 498 (679)
+.+..... ......++.+++..|.-||+..
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 87765421 1223345666666666666421
Q ss_pred -------------CCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 499 -------------EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 499 -------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11279999999999999887778999987753
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=1.4e-06 Score=82.72 Aligned_cols=121 Identities=15% Similarity=0.119 Sum_probs=82.8
Q ss_pred CCcccCCCCCCCEEEccCC-CCCCcChhhHHh---hcccCcEEEccCCCCcccCCCCCC-CCCCCCCccEEEccCccccc
Q 005749 139 IPFELGYSSSLSEIDLSAN-LFTGVLAPSIWN---LCDRLVSLRLHGNSLTAALPEPAL-PNSTCSDLQYLDLGSNKFSG 213 (679)
Q Consensus 139 ip~~l~~l~~L~~L~Ls~N-~l~g~~p~~~~~---~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~~~~L~~L~l~~N~l~g 213 (679)
+...+...++|++|+|++| .+...--..+.. ..++|++|+|++|.++..--.... .....++|++|+|++|+|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445677899999999999 887431122222 136899999999999742100000 00123579999999999985
Q ss_pred c----ccccccCCCCCCEEEc--cCCcccccCCccccc-----cccCEEEccCCcCC
Q 005749 214 S----FPEFVTRFEALKELDI--SNNLFSGSIPEGLTR-----LSLEKLNLSHNNFS 259 (679)
Q Consensus 214 ~----~p~~~~~l~~L~~L~l--s~N~l~g~~p~~~~~-----l~L~~l~ls~N~l~ 259 (679)
. +...+...+.|++|+| ++|.|+..-...+.. -+|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 5667778889999999 889997543222222 16999999999874
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.03 E-value=1.9e-05 Score=84.35 Aligned_cols=148 Identities=16% Similarity=0.159 Sum_probs=106.9
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
+++.+.|..+ ++..-...|.+ .+|+.++|.+ .++..-+..+.+|++|+.++|++|+++. ++...+.. .+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~-~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVY-AGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTT-CCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEee-cccCEEEe
Confidence 6888888765 55333346666 4799999996 6774445678899999999999999984 56666664 89999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCCcC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHNNF 258 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N~l 258 (679)
.+| ++ .++...+ ..|.+|+.+++..| ++..-..+|.. .+|+.+.+ .|.++..-+..+..+ +|+.+++.+|.+
T Consensus 211 p~~-l~-~I~~~aF--~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 211 PVT-LK-EIGSQAF--LKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp CTT-CC-EECTTTT--TTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred CCc-hh-eehhhHh--hCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 855 65 3444443 57889999999875 55333445665 78999998 455663445556655 699999988877
Q ss_pred C
Q 005749 259 S 259 (679)
Q Consensus 259 ~ 259 (679)
.
T Consensus 284 ~ 284 (401)
T 4fdw_A 284 N 284 (401)
T ss_dssp C
T ss_pred c
Confidence 5
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.83 E-value=6.8e-05 Score=80.00 Aligned_cols=74 Identities=5% Similarity=-0.056 Sum_probs=49.1
Q ss_pred CccccCCceEEEEEEeC-CCCEEEEEEcccCcc-------cCcccHHHHHHHHhccCC--CCCc-cceEEeeCCCCceEE
Q 005749 383 QVIEKTTYGTAYKAKLA-DGATIALRLLREGSC-------KDRSSCLPVIRQLGKVRH--ENLI-PLRAFYQGKRGEKLL 451 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--~nIv-~l~~~~~~~~~~~~l 451 (679)
+.||.|..+.||+++.. +++.++||....... ...+.+..|.++++.+.. +..+ +++.+ . .+..++
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d--~~~~~l 112 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D--TEMAVT 112 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E--TTTTEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c--CCccEE
Confidence 46899999999999854 478899998654211 123456889999888742 3444 45543 2 345689
Q ss_pred EEEecCCC
Q 005749 452 IYDYFPSR 459 (679)
Q Consensus 452 v~ey~~~g 459 (679)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.82 E-value=5.5e-05 Score=78.68 Aligned_cols=141 Identities=14% Similarity=0.212 Sum_probs=78.9
Q ss_pred ccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccC-----CCCCccce-E-EeeCCCCceEEEEEec
Q 005749 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVR-----HENLIPLR-A-FYQGKRGEKLLIYDYF 456 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nIv~l~-~-~~~~~~~~~~lv~ey~ 456 (679)
.|+.|..+.||+....+| .+++|+.... .+....|++++..+. .|.++... | .+....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455577889999987655 4889988752 233445666666553 24443311 1 1111145689999999
Q ss_pred CCCChH--------------HHhhcccCCC----------CCCCHHHHH-------------------------------
Q 005749 457 PSRTLH--------------DLLHDTIAGK----------PVLNWARRH------------------------------- 481 (679)
Q Consensus 457 ~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~------------------------------- 481 (679)
+|..+. ..+|...... ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1122111100 012332210
Q ss_pred HHHHHHHHHHHHHhc--------C--CCCCeeecCCCCCCeeecCCCceEEeeccccc
Q 005749 482 KIALGIARGLAYLHT--------G--HEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529 (679)
Q Consensus 482 ~i~~~ia~gL~~LH~--------~--~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 529 (679)
.+...+.+++++|+. . ....++|+|+++.|||++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 0 23459999999999999888889999998764
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.62 E-value=0.00043 Score=70.18 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=54.1
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCC---CCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHE---NLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.+|.|..+.||+.++.||+.|.+|+-..........|.+|.+.|+.+.-. -+.+++++ +.-++||||++.+
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~-----~~~~lv~e~l~~~ 95 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW-----DDRTLAMEWVDER 95 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE-----ETTEEEEECCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec-----cCceEEEEeeccc
Confidence 457889999999999999999999987654444445688999999888422 23344443 2347899999876
Q ss_pred Ch
Q 005749 460 TL 461 (679)
Q Consensus 460 sL 461 (679)
..
T Consensus 96 ~~ 97 (288)
T 3f7w_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00017 Score=77.47 Aligned_cols=77 Identities=8% Similarity=0.035 Sum_probs=47.7
Q ss_pred CCeeecCCCCCCeeecCCCceEEeecccccccCcccccchhccc--cccccccccccccc---CCCCcchhHHHHHHHHH
Q 005749 500 IPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALA--KADGYKAPELQRMK---KCSSRTDVYAFGILLLE 574 (679)
Q Consensus 500 ~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~k~DV~S~Gvvl~E 574 (679)
..++|+|++|.|||+++++ +++.||+.+..-.+.. ...... -...|.+|+..... .-....++......+|+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~--Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF--DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH--HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH--HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 3499999999999999876 9999999887543221 111111 11346666654311 11123556678888888
Q ss_pred HHhCC
Q 005749 575 ILIGK 579 (679)
Q Consensus 575 l~tg~ 579 (679)
.+.++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 422
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.00041 Score=71.21 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=89.5
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccC---CCCCccceEEeeCCCCceEEEEEecCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVR---HENLIPLRAFYQGKRGEKLLIYDYFPSR 459 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~~lv~ey~~~g 459 (679)
+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.+++++... .+..++||||+++.
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEALNKS 116 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEECCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEeccCC
Confidence 3578899999999986 4678888987542 2456889999998884 2557778887776 57899999999987
Q ss_pred ChHH-----------HhhcccC----C--------------CCCCCHHHHH---HHHH----------------HHHHH-
Q 005749 460 TLHD-----------LLHDTIA----G--------------KPVLNWARRH---KIAL----------------GIARG- 490 (679)
Q Consensus 460 sL~~-----------~l~~~~~----~--------------~~~l~~~~~~---~i~~----------------~ia~g- 490 (679)
.+.. .|+.... + ...-+|.... ++.. .+...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222111 0 0012465321 1111 11111
Q ss_pred HHHHhc-CCCCCeeecCCCCCCeeecCCCceEEeecc
Q 005749 491 LAYLHT-GHEIPITHGNVRSKNVLVDDFFVSRLTEFG 526 (679)
Q Consensus 491 L~~LH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 526 (679)
...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223432 2245699999999999999887 8899974
No 423
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.13 E-value=0.0027 Score=65.61 Aligned_cols=141 Identities=12% Similarity=0.108 Sum_probs=74.2
Q ss_pred ccccCCceE-EEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCC--CccceEEeeCCCCceEEEEEecCCCC
Q 005749 384 VIEKTTYGT-AYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHEN--LIPLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 384 ~ig~G~~g~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
.++.|.... +|+....+|..+++|...... .+.+..|++++..+.... +.+++.+... .+ +++||++.+..
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~-~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHA-RG--LLLIEDLGDAL 98 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETT-TT--EEEECCCCSCB
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCC-CC--EEEEeeCCCcc
Confidence 344444443 667765446777777654421 145677888887774323 4456665332 23 78999998766
Q ss_pred hHHHhhccc---------------------C-CCCCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 005749 461 LHDLLHDTI---------------------A-GKPVLNWARRH-------K-I------------ALGIARGLAYLH--- 495 (679)
Q Consensus 461 L~~~l~~~~---------------------~-~~~~l~~~~~~-------~-i------------~~~ia~gL~~LH--- 495 (679)
+.+.+.... . .-+.++..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432110 0 01112211100 0 0 001111222221
Q ss_pred cCCCCCeeecCCCCCCeeecCC----CceEEeecccccc
Q 005749 496 TGHEIPITHGNVRSKNVLVDDF----FVSRLTEFGLDQL 530 (679)
Q Consensus 496 ~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~~ 530 (679)
......++|+|+.+.||+++++ ..+.|.||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999874 6789999998764
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.03 E-value=0.0033 Score=63.98 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=44.7
Q ss_pred CccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCc-cceEEeeCCCCceEEEEEec-CCCC
Q 005749 383 QVIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLI-PLRAFYQGKRGEKLLIYDYF-PSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv-~l~~~~~~~~~~~~lv~ey~-~~gs 460 (679)
+.|+.|....+|+. ..+++|+...... ......+|+++++.+....+. ++++++ .+.-++|+||+ ++.+
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~---~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD---PATGVMVTRYIAGAQT 94 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC---TTTCCEEEECCTTCEE
T ss_pred eEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE---CCCCEEEEeecCCCcc
Confidence 45778888999998 5688888765322 223456788888887544443 455443 23457899999 6544
Q ss_pred h
Q 005749 461 L 461 (679)
Q Consensus 461 L 461 (679)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.99 E-value=0.00027 Score=65.59 Aligned_cols=59 Identities=7% Similarity=-0.019 Sum_probs=31.6
Q ss_pred CCCeeecccCcccccCCcccCCCCCCCEEEccCCC-CCCcChhhHHhh---cccCcEEEccCC
Q 005749 124 MLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANL-FTGVLAPSIWNL---CDRLVSLRLHGN 182 (679)
Q Consensus 124 ~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~~---~~~L~~L~Ls~N 182 (679)
+|+.|||+++.++..=-..+..+++|++|+|+++. ++..--..+... +++|++|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 56777777776654322345667777777777764 543211122221 134666666554
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.86 E-value=0.0025 Score=65.47 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=78.9
Q ss_pred ccccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCC--ccceEEe-----eCCCCceEEEEEec
Q 005749 384 VIEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENL--IPLRAFY-----QGKRGEKLLIYDYF 456 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI--v~l~~~~-----~~~~~~~~lv~ey~ 456 (679)
.|+.|....+|+....+| .+++|..... ...+.+..|++++..++...+ .+++... ....+..+++|+|+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 456677789999987666 6778887652 134566778888877743222 2232210 00135678999999
Q ss_pred CCCChHH--------------HhhcccCC--CC------CCCHHHHHH------------HHHHHHHHHHHHhcC----C
Q 005749 457 PSRTLHD--------------LLHDTIAG--KP------VLNWARRHK------------IALGIARGLAYLHTG----H 498 (679)
Q Consensus 457 ~~gsL~~--------------~l~~~~~~--~~------~l~~~~~~~------------i~~~ia~gL~~LH~~----~ 498 (679)
+|..+.. .++..... .. ...|..... +...+.+.+++++.. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865321 11211000 00 012332110 011234445555431 1
Q ss_pred CCCeeecCCCCCCeeecCCCceEEeeccccc
Q 005749 499 EIPITHGNVRSKNVLVDDFFVSRLTEFGLDQ 529 (679)
Q Consensus 499 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 529 (679)
...++|+|+++.|||++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2358999999999999987666899998765
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.75 E-value=0.01 Score=61.05 Aligned_cols=141 Identities=11% Similarity=0.142 Sum_probs=80.2
Q ss_pred cccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCCCC--CccceEE-----eeCCCCceEEEEEecC
Q 005749 385 IEKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRHEN--LIPLRAF-----YQGKRGEKLLIYDYFP 457 (679)
Q Consensus 385 ig~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~-----~~~~~~~~~lv~ey~~ 457 (679)
++ |....||+....+|+.+++|...... ...+.+..|.+++..+.... +.+++.. ... .+..+++|||++
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~-~g~~~~l~~~i~ 110 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH-QGFYFAVFPSVG 110 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEE-TTEEEEEEECCC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEE-CCEEEEEEEecC
Confidence 44 77779999887778889999986432 13456777888888774222 3344432 111 345688999998
Q ss_pred CCChH-----H------H---hhcccC-----CCCCCCHHHH----------------------HHHHHHHHHHHHHHhc
Q 005749 458 SRTLH-----D------L---LHDTIA-----GKPVLNWARR----------------------HKIALGIARGLAYLHT 496 (679)
Q Consensus 458 ~gsL~-----~------~---l~~~~~-----~~~~l~~~~~----------------------~~i~~~ia~gL~~LH~ 496 (679)
|..+. . . +|.... ....+++... ...+..+...++-+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75432 0 0 111100 0112232211 0111122222222211
Q ss_pred -CCCCCeeecCCCCCCeeecCCCceEEeecccccc
Q 005749 497 -GHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQL 530 (679)
Q Consensus 497 -~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 530 (679)
.....++|+|+++.|||++ + .+.+.||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1223489999999999999 4 899999987753
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0019 Score=56.90 Aligned_cols=54 Identities=28% Similarity=0.261 Sum_probs=23.5
Q ss_pred EEcCCCCCc-ccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCC
Q 005749 104 IQLPSANLT-GSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLF 159 (679)
Q Consensus 104 l~l~~n~l~-g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l 159 (679)
++-++++|+ ..+|..|. ++|++|+|++|+|+..-+..+..+++|+.|+|++|.+
T Consensus 13 v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 13 VDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344555554 34443221 2345555555555422222234444455555555544
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.74 E-value=0.00094 Score=61.95 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=58.9
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCc-ccccCCcccCCC----CCCCEEEccCCC-CCCcChhhHHhhcc
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNS-LKGTIPFELGYS----SSLSEIDLSANL-FTGVLAPSIWNLCD 172 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~-l~g~ip~~l~~l----~~L~~L~Ls~N~-l~g~~p~~~~~~~~ 172 (679)
.+++.|+|+++.++..--..+..+++|++|+|+++. |+..-=..++.+ ++|++|||+++. +|..--..+.. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~-~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHH-FR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGG-CT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhc-CC
Confidence 369999999999875544567899999999999995 775333345543 479999999974 76421123333 46
Q ss_pred cCcEEEccCC
Q 005749 173 RLVSLRLHGN 182 (679)
Q Consensus 173 ~L~~L~Ls~N 182 (679)
+|+.|+|++.
T Consensus 140 ~L~~L~L~~c 149 (176)
T 3e4g_A 140 NLKYLFLSDL 149 (176)
T ss_dssp TCCEEEEESC
T ss_pred CCCEEECCCC
Confidence 7777777765
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.70 E-value=0.0043 Score=66.68 Aligned_cols=72 Identities=18% Similarity=0.265 Sum_probs=48.9
Q ss_pred CccccCCceEEEEEEeCC--------CCEEEEEEcccCcccCcccHHHHHHHHhccCCCCC-ccceEEeeCCCCceEEEE
Q 005749 383 QVIEKTTYGTAYKAKLAD--------GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENL-IPLRAFYQGKRGEKLLIY 453 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~lv~ 453 (679)
+.|+.|....||+....+ +..+.+|+.... ...+.+.+|..+++.+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~-----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG-----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT-----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC-----CEEE
Confidence 356778888999998753 578999987432 111566789999988854444 456665432 2899
Q ss_pred EecCCCCh
Q 005749 454 DYFPSRTL 461 (679)
Q Consensus 454 ey~~~gsL 461 (679)
||+++.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.70 E-value=0.00056 Score=64.71 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=35.9
Q ss_pred cccCCCCCCeeecccC-ccccc----CCcccCCCCCCCEEEccCCCCCCcC----hhhHHhhcccCcEEEccCCCCc
Q 005749 118 ELGEFSMLQSLYLNVN-SLKGT----IPFELGYSSSLSEIDLSANLFTGVL----APSIWNLCDRLVSLRLHGNSLT 185 (679)
Q Consensus 118 ~l~~l~~L~~L~L~~N-~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~----p~~~~~~~~~L~~L~Ls~N~l~ 185 (679)
-+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|.+...- ...+... +.|+.|+|++|.|+
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N-~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETS-PSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHC-SSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcC-CccCeEecCCCcCC
Confidence 3344566777777764 65421 3334455566777777777775321 1112222 34556666655554
No 432
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.44 E-value=0.01 Score=62.82 Aligned_cols=131 Identities=17% Similarity=0.211 Sum_probs=73.0
Q ss_pred cccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCC
Q 005749 118 ELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNST 197 (679)
Q Consensus 118 ~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 197 (679)
.|..+++|+.+.+.++..+ .-...+.++++|+.+++.. .++ .++...+..+.+|+.++|..| ++ .|....+ ..
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF--~~ 332 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAF--AG 332 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTT--TT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCCC-ccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHh--hC
Confidence 4566777888877765443 2334466778888888863 344 345555555678888888654 43 2333333 46
Q ss_pred CCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCccccccccCEEEccCCcC
Q 005749 198 CSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRLSLEKLNLSHNNF 258 (679)
Q Consensus 198 ~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~L~~l~ls~N~l 258 (679)
|.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... -.....-.|+.+.+..|.+
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCCE
Confidence 778888888654 552334567788888888887776432 1122222566666666544
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.36 E-value=0.0015 Score=61.74 Aligned_cols=65 Identities=14% Similarity=0.187 Sum_probs=49.7
Q ss_pred CccEEEEEcCCC-CCcc----cCCccccCCCCCCeeecccCccccc----CCcccCCCCCCCEEEccCCCCCCc
Q 005749 98 SIHLLSIQLPSA-NLTG----SLPRELGEFSMLQSLYLNVNSLKGT----IPFELGYSSSLSEIDLSANLFTGV 162 (679)
Q Consensus 98 ~~~l~~l~l~~n-~l~g----~ip~~l~~l~~L~~L~L~~N~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~ 162 (679)
...++.|+|++| ++.. .|-..+..-+.|+.|+|++|.|... |-..+..-+.|++|+|++|.+...
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 446899999986 6642 2566778889999999999999743 333444557899999999999753
No 434
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.34 E-value=0.0099 Score=62.35 Aligned_cols=73 Identities=8% Similarity=0.105 Sum_probs=44.8
Q ss_pred CccccCCceEEEEEEeCC---------CCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCc-cceEEeeCCCCceEEE
Q 005749 383 QVIEKTTYGTAYKAKLAD---------GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLI-PLRAFYQGKRGEKLLI 452 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv-~l~~~~~~~~~~~~lv 452 (679)
+.++.|....+|+....+ +..+++|+...... ...+...|.++++.+...+++ ++++.. . -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~---~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF---N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE---T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec---C--CcEE
Confidence 346667778899998654 26888888755321 122457888888888544444 565443 1 2689
Q ss_pred EEecCCCCh
Q 005749 453 YDYFPSRTL 461 (679)
Q Consensus 453 ~ey~~~gsL 461 (679)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.33 E-value=0.029 Score=53.35 Aligned_cols=103 Identities=15% Similarity=0.084 Sum_probs=67.1
Q ss_pred CChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCceEEeecccccccCcccccc
Q 005749 459 RTLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRSKNVLVDDFFVSRLTEFGLDQLMVPAVADE 538 (679)
Q Consensus 459 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 538 (679)
-||.++|... +.++++.+++.++.|.+++|.-+-.+..+ ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---------
Confidence 3899999876 57899999999999999998776211101 1222446889999999887764 1111
Q ss_pred hhcccccccccccccccccCCCCcchhHHHHHHHHHHHhCCCC
Q 005749 539 MVALAKADGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKP 581 (679)
Q Consensus 539 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gvvl~El~tg~~p 581 (679)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122366888764 3456788999999999998854433
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.29 E-value=0.0059 Score=53.71 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=36.7
Q ss_pred cEEEccCCCCc-ccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCccc
Q 005749 175 VSLRLHGNSLT-AALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 175 ~~L~Ls~N~l~-~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
..++.+++.|+ ..+|..+ ..+|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l-----p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF-----PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC-----CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC-----CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35677777775 2344321 235777777777777544556677778888888877663
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.17 E-value=0.028 Score=60.70 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=47.4
Q ss_pred CccccCCceEEEEEEeCC-CCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCc-cceEEeeCCCCceEEEEEecCCCC
Q 005749 383 QVIEKTTYGTAYKAKLAD-GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLI-PLRAFYQGKRGEKLLIYDYFPSRT 460 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv-~l~~~~~~~~~~~~lv~ey~~~gs 460 (679)
+.|+.|-...+|+....+ +..+++|+..... ...-+..+|..++..+...+++ ++++++. . .+||||+++.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N---GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T---EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C---eEEEEeeCCcc
Confidence 456778888999999765 4788888864432 1222336899999988755554 5666653 2 25999998754
Q ss_pred h
Q 005749 461 L 461 (679)
Q Consensus 461 L 461 (679)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.91 E-value=0.044 Score=56.65 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=43.2
Q ss_pred ccCCceEEEEEEeCCCCEEEEEEcccCcccCcccHHHHHHHHhccCC---CCCccceEE------eeCCCCceEEEEEec
Q 005749 386 EKTTYGTAYKAKLADGATIALRLLREGSCKDRSSCLPVIRQLGKVRH---ENLIPLRAF------YQGKRGEKLLIYDYF 456 (679)
Q Consensus 386 g~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H---~nIv~l~~~------~~~~~~~~~lv~ey~ 456 (679)
|.|....||+....+| .+++|+..... ...|++.+..+.. |.+.+.+.. ... .+..+++|+|+
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~-~g~~~~l~~~i 103 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQL-KHFKIIAYPFI 103 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEEC-SSEEEEEEECC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEE-CCEEEEEEecc
Confidence 3344678999998777 89999876532 1356666666632 224444432 112 45679999999
Q ss_pred CCCCh
Q 005749 457 PSRTL 461 (679)
Q Consensus 457 ~~gsL 461 (679)
+|..+
T Consensus 104 ~G~~~ 108 (339)
T 3i1a_A 104 HAPNG 108 (339)
T ss_dssp CCCBT
T ss_pred CCCcC
Confidence 98765
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.80 E-value=0.03 Score=58.87 Aligned_cols=140 Identities=15% Similarity=0.194 Sum_probs=80.6
Q ss_pred ccccCCceEEEEEEeC--------CCCEEEEEEcccCcccCcccHHHHHHHHhccCCCCC-ccceEEeeCCCCceEEEEE
Q 005749 384 VIEKTTYGTAYKAKLA--------DGATIALRLLREGSCKDRSSCLPVIRQLGKVRHENL-IPLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~lv~e 454 (679)
.+..|....+|+.... +++.+.+|+.... ........+|.++++.+.-..+ .++++++.+ + +|||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--g---~v~e 130 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE--G---RLEQ 130 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--E---EEEE
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--c---cEEE
Confidence 4555667788998864 2478899886332 2234567789999988853333 456665542 2 9999
Q ss_pred ecCCCChHHH-----------------hhccc-CCCCCCC--HHHHHHHHHHHHH-------------------HHHHH-
Q 005749 455 YFPSRTLHDL-----------------LHDTI-AGKPVLN--WARRHKIALGIAR-------------------GLAYL- 494 (679)
Q Consensus 455 y~~~gsL~~~-----------------l~~~~-~~~~~l~--~~~~~~i~~~ia~-------------------gL~~L- 494 (679)
|++|.+|..- +|... ....... |.+..++..++.. .++.|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654311 11110 0011122 4555555544321 22333
Q ss_pred ---hcC-CCCCeeecCCCCCCeeecCC----CceEEeeccccc
Q 005749 495 ---HTG-HEIPITHGNVRSKNVLVDDF----FVSRLTEFGLDQ 529 (679)
Q Consensus 495 ---H~~-~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 529 (679)
... ....++|+|+.+.||+++++ +.+.+.||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 22358999999999999876 689999998765
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.53 E-value=0.062 Score=56.70 Aligned_cols=127 Identities=15% Similarity=0.190 Sum_probs=68.2
Q ss_pred ccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCC
Q 005749 119 LGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTC 198 (679)
Q Consensus 119 l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 198 (679)
+..+.+|+.+.+..|..+ .-...+..+..|+.+.+..+. ++...+..+.+|+.+.+.+| ++ .|++..+ ..|
T Consensus 249 f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF--~~c 319 (394)
T 4fs7_A 249 FYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VK-FIGEEAF--ESC 319 (394)
T ss_dssp TTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CC-EECTTTT--TTC
T ss_pred ccccccceeEEcCCCcce-eeccccccccccceeccCcee----eccccccccccccccccccc-cc-eechhhh--cCC
Confidence 444555666665555433 223334555566665555443 22333333467777777654 33 2333332 456
Q ss_pred CCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 199 SDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 199 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
++|+.++|..+ ++..-..+|.++++|+.+++..| ++..-...+... +|+.+++..|
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77777777543 54333456777777777777665 542223344444 5777777554
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.52 E-value=0.029 Score=59.31 Aligned_cols=127 Identities=17% Similarity=0.291 Sum_probs=80.0
Q ss_pred ccEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEE
Q 005749 99 IHLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLR 178 (679)
Q Consensus 99 ~~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~ 178 (679)
..++.+.+..+-. ..-...+.++++|+.+.+. +.++..-...+.++.+|+.++|..| ++ .|....+..+.+|+.+.
T Consensus 265 ~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 265 AYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIA 340 (394)
T ss_dssp SSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEE
T ss_pred ccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEE
Confidence 3456666654332 1223467889999999997 4566333345778999999999876 55 35555566678999999
Q ss_pred ccCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCCccc
Q 005749 179 LHGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFS 236 (679)
Q Consensus 179 Ls~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 236 (679)
|..+ ++ .++...+ ..|++|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 341 ip~s-v~-~I~~~aF--~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 341 IPSS-VT-KIPESAF--SNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp ECTT-CC-BCCGGGG--TTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred ECcc-cC-EEhHhHh--hCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 9765 55 3444333 579999999999987642 45677889999988777653
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.11 E-value=0.063 Score=56.21 Aligned_cols=133 Identities=13% Similarity=0.158 Sum_probs=83.0
Q ss_pred CccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCC
Q 005749 116 PRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPN 195 (679)
Q Consensus 116 p~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~ 195 (679)
...+....+|+.+.+..+ +...-...+.++.+|+.+.+..+ ++ .+....+..+.+|+.+.+..+ ++ .++...+
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF-- 282 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLC-- 282 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTT--
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-ecccccc--
Confidence 345566778888887655 33233445667788888888766 44 234444454577888888654 33 2333332
Q ss_pred CCCCCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 196 STCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 196 ~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
..|++|+.+.+.++.++..-...|.++.+|+.++|..+ ++-.-...+... +|+.+.+..|
T Consensus 283 ~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 283 SGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 46788888888888777444567888888888888654 542223345443 5776665443
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.97 E-value=0.076 Score=56.07 Aligned_cols=141 Identities=17% Similarity=0.227 Sum_probs=79.0
Q ss_pred ccccCCceEEEEEEeCC--------CCEEEEEEcccCcc-----------cCc-------ccHHHHHHHHhccCCCCC-c
Q 005749 384 VIEKTTYGTAYKAKLAD--------GATIALRLLREGSC-----------KDR-------SSCLPVIRQLGKVRHENL-I 436 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~-----------~~~-------~~~~~Ei~~l~~l~H~nI-v 436 (679)
.|..|--..+|+....+ +..|.+++.-.... -++ +....|.++++.+...++ .
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 34456677888888654 36788887643221 111 123358888888854444 4
Q ss_pred cceEEeeCCCCceEEEEEecCCCChHH--H---------------hhcc-cCCCCCCC--HHHHHHHHHHHH--------
Q 005749 437 PLRAFYQGKRGEKLLIYDYFPSRTLHD--L---------------LHDT-IAGKPVLN--WARRHKIALGIA-------- 488 (679)
Q Consensus 437 ~l~~~~~~~~~~~~lv~ey~~~gsL~~--~---------------l~~~-~~~~~~l~--~~~~~~i~~~ia-------- 488 (679)
++++++.. + +|+||+++-+|.. + +|.. ........ |....++..++.
T Consensus 139 kl~~~~~~--G---~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 139 KLYGIFPQ--G---RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CEEEEETT--E---EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred eEEEEeCC--C---eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 56666542 2 8999999754421 1 0111 01111222 334444443321
Q ss_pred --------------HHH----HHHhcC-CCCCeeecCCCCCCeeecCC------CceEEeeccccc
Q 005749 489 --------------RGL----AYLHTG-HEIPITHGNVRSKNVLVDDF------FVSRLTEFGLDQ 529 (679)
Q Consensus 489 --------------~gL----~~LH~~-~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~ 529 (679)
.-+ ++|... ....++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22348999999999999886 789999998764
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.79 E-value=0.12 Score=53.99 Aligned_cols=130 Identities=13% Similarity=0.188 Sum_probs=75.5
Q ss_pred ccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEccCCCCcccCCCCCCCCCCC
Q 005749 119 LGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRLHGNSLTAALPEPALPNSTC 198 (679)
Q Consensus 119 l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 198 (679)
+.....+..+.+..+.-. .....+..+.+|+.+.+..+- + .++...+..+..|+.+.+..+ ++ .+....+ ..|
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~-~-~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF--~~~ 262 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGV-T-TLGDGAFYGMKALDEIAIPKN-VT-SIGSFLL--QNC 262 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTC-C-EECTTTTTTCSSCCEEEECTT-CC-EECTTTT--TTC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccce-e-EEccccccCCccceEEEcCCC-cc-EeCcccc--cee
Confidence 334445555554443322 334445567778888876552 2 233333344577888888765 43 2333222 456
Q ss_pred CCccEEEccCccccccccccccCCCCCCEEEccCCcccccCCcccccc-ccCEEEccCC
Q 005749 199 SDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNNLFSGSIPEGLTRL-SLEKLNLSHN 256 (679)
Q Consensus 199 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l-~L~~l~ls~N 256 (679)
.+|+.+.+..+ +...-...|..+++|+.+.+.+|.++..-...+... +|+.++|..+
T Consensus 263 ~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 77888887644 442333467778888888888877763334455554 6888887654
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.76 E-value=0.086 Score=55.58 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=85.2
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCCeeecccCcccccCCcccCCCCCCCEEEccCCCCCCcChhhHHhhcccCcEEEc
Q 005749 100 HLLSIQLPSANLTGSLPRELGEFSMLQSLYLNVNSLKGTIPFELGYSSSLSEIDLSANLFTGVLAPSIWNLCDRLVSLRL 179 (679)
Q Consensus 100 ~l~~l~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~L~~L~L 179 (679)
.+..+.+..+.. ..-...+..+..|+.+.+..+.+. ...+..+.+|+.+.+..| ++ .|+...+..+++|+.++|
T Consensus 254 ~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 254 DLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECC
T ss_pred cceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEEe
Confidence 344555544432 223345778889999888776542 234677899999999876 54 355555655689999999
Q ss_pred cCCCCcccCCCCCCCCCCCCCccEEEccCccccccccccccCCCCCCEEEccCC
Q 005749 180 HGNSLTAALPEPALPNSTCSDLQYLDLGSNKFSGSFPEFVTRFEALKELDISNN 233 (679)
Q Consensus 180 s~N~l~~~~p~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N 233 (679)
.++ ++ .++...+ ..|++|+.+.+..| ++..-..+|.++++|+.+++..|
T Consensus 328 p~~-v~-~I~~~aF--~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 328 PYL-VE-EIGKRSF--RGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CC-EECTTTT--TTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCc-cc-EEhHHhc--cCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 755 55 3444443 57899999999877 66444567999999999999765
No 446
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.08 E-value=0.036 Score=36.74 Aligned_cols=26 Identities=31% Similarity=0.677 Sum_probs=19.2
Q ss_pred CCCCCCcchhhhhHHHHHHHHHHHHH
Q 005749 294 SRLSSGAIAGLVIGLMTGAVVFASLL 319 (679)
Q Consensus 294 ~~~s~~~i~~iv~~~~~~~~~~~~l~ 319 (679)
++++.+.++++++|.++++++++.++
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGIL 31 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHH
Confidence 45677889999999888766655544
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.64 E-value=0.35 Score=51.39 Aligned_cols=72 Identities=10% Similarity=0.082 Sum_probs=47.2
Q ss_pred ccccCCceEEEEEEeCC--------CCEEEEEEcccCcccCcccHHHHHHHHhccCCCCCc-cceEEeeCCCCceEEEEE
Q 005749 384 VIEKTTYGTAYKAKLAD--------GATIALRLLREGSCKDRSSCLPVIRQLGKVRHENLI-PLRAFYQGKRGEKLLIYD 454 (679)
Q Consensus 384 ~ig~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv-~l~~~~~~~~~~~~lv~e 454 (679)
.+..|-...+|+....+ +..+++|+..... ...-+..+|.++++.+.-..++ ++++.+. -++|||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~-----~~~I~e 150 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP-----EGRIEE 150 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET-----TEEEEE
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC-----CCEEEE
Confidence 45557777899988753 5788998865432 2233457899998888544443 4554322 268999
Q ss_pred ecCCCCh
Q 005749 455 YFPSRTL 461 (679)
Q Consensus 455 y~~~gsL 461 (679)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.01 E-value=0.098 Score=56.53 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=16.5
Q ss_pred CccccCCceEEEEEEeCC-CCEEEE------EEcccCc--ccCcccHHHHHHHHhccCCCCCccceEEee
Q 005749 383 QVIEKTTYGTAYKAKLAD-GATIAL------RLLREGS--CKDRSSCLPVIRQLGKVRHENLIPLRAFYQ 443 (679)
Q Consensus 383 ~~ig~G~~g~Vy~~~~~~-~~~vAv------K~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 443 (679)
+.+| ||.||+|.+.. ..+||| |..+... .+....|.+|..++.+.+|||+++.++|-.
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4555 99999999754 468898 7766532 233457889999999999999999988754
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.69 E-value=0.89 Score=30.96 Aligned_cols=7 Identities=43% Similarity=0.738 Sum_probs=3.5
Q ss_pred chhhhhH
Q 005749 301 IAGLVIG 307 (679)
Q Consensus 301 i~~iv~~ 307 (679)
+++.++|
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4445555
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.55 E-value=0.92 Score=30.95 Aligned_cols=7 Identities=14% Similarity=0.567 Sum_probs=2.7
Q ss_pred hhhHHHH
Q 005749 304 LVIGLMT 310 (679)
Q Consensus 304 iv~~~~~ 310 (679)
|++|++.
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 3333333
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.52 E-value=2.3 Score=44.73 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.1
Q ss_pred eeecCCCCCCeee------cCCCceEEeecccccc
Q 005749 502 ITHGNVRSKNVLV------DDFFVSRLTEFGLDQL 530 (679)
Q Consensus 502 ivHrDlkp~NILl------~~~~~~kl~DFGla~~ 530 (679)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4456799999987753
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=82.96 E-value=1.1 Score=30.07 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=12.9
Q ss_pred chhhhhHHHHHHHHHH-HHHHhhhhccc
Q 005749 301 IAGLVIGLMTGAVVFA-SLLIGYVQNKK 327 (679)
Q Consensus 301 i~~iv~~~~~~~~~~~-~l~~~~~~~~~ 327 (679)
..++++++++|+++++ ++.+.++.+||
T Consensus 12 ~~~I~~~vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred eEEEEeehhHHHHHHHHHHHHheeEeee
Confidence 3455666666555544 33333444443
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.01 E-value=1.5 Score=29.92 Aligned_cols=18 Identities=33% Similarity=0.211 Sum_probs=9.3
Q ss_pred CcchhhhhHHHHHHHHHH
Q 005749 299 GAIAGLVIGLMTGAVVFA 316 (679)
Q Consensus 299 ~~i~~iv~~~~~~~~~~~ 316 (679)
..+++.++|.++++++++
T Consensus 10 ~aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeehHHHHHHHHHH
Confidence 346666665555444444
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.91 E-value=4.5 Score=38.40 Aligned_cols=113 Identities=10% Similarity=0.046 Sum_probs=73.5
Q ss_pred CCCCCccceEEeeCCCCceEEEEEecCCCChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeeecCCCC
Q 005749 431 RHENLIPLRAFYQGKRGEKLLIYDYFPSRTLHDLLHDTIAGKPVLNWARRHKIALGIARGLA-YLHTGHEIPITHGNVRS 509 (679)
Q Consensus 431 ~H~nIv~l~~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~-~LH~~~~~~ivHrDlkp 509 (679)
.||++ -..+-.+ .+.+.+.|+.-+++.=...++ .++...+++++..|+.-.. +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~-eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVS-EDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEEC-SSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEe-CCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57877 2233333 567777777654432223333 2688899999999987666 5554 56888999
Q ss_pred CCeeecCCCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchhH-HHHHHHHHHHhCCCCC
Q 005749 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDVY-AFGILLLEILIGKKPG 582 (679)
Q Consensus 510 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~-S~Gvvl~El~tg~~p~ 582 (679)
+||++|.++.+++.-.|+-..+ +|.-+ ...|.| .+=+++..++.++..|
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l------------------pP~e~------~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL------------------PPDEW------DDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB------------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCH
T ss_pred ceEEEeCCCcEEEEEcCCcccC------------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999988864433 22211 122222 3566777788887766
No 455
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.15 E-value=4.4 Score=38.33 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=75.6
Q ss_pred CCCCCccceEEeeCCCCceEEEEEecCCC-ChHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005749 431 RHENLIPLRAFYQGKRGEKLLIYDYFPSR-TLHDLLHDTIAGKPVLNWARRHKIALGIARGLAYLHTGHEIPITHGNVRS 509 (679)
Q Consensus 431 ~H~nIv~l~~~~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrDlkp 509 (679)
.||+++.. .+-.+ .+.+.+.|+.-+.+ +... ++ .++...+++++..|+.-.++++. -+|--|.|
T Consensus 43 ~~~~Fl~~-~I~e~-eD~v~~~y~~~~~~~~f~~-ik-------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 43 HSPYFIDA-ELTEL-RDSFQIHYDINDNHTPFDN-IK-------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp CCTTBCCE-EEEEC-SSEEEEEECCCTTSEEGGG-GG-------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred cCCcccce-EEEEc-ccEEEEEEEcCcccCCHHH-HH-------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 58888865 34444 45666666554322 2222 22 37889999999999987766664 46888999
Q ss_pred CCeeecCCCceEEeecccccccCcccccchhcccccccccccccccccCCCCcchh-HHHHHHHHHHHhCCCCC
Q 005749 510 KNVLVDDFFVSRLTEFGLDQLMVPAVADEMVALAKADGYKAPELQRMKKCSSRTDV-YAFGILLLEILIGKKPG 582 (679)
Q Consensus 510 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV-~S~Gvvl~El~tg~~p~ 582 (679)
+||.++.++.+++.--|+...+. |. ..+ +.|. -.+=+++..+++++..|
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l~------------------P~-----~~~-ee~fL~qyKAliiall~~K~~F 157 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVVD------------------PL-----PVS-EAEFLTRYKALVICAFNEKQSF 157 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTBS------------------CC-----CCC-HHHHHHHHHHHHHHHHCTTCCH
T ss_pred ceEEEcCCCCEEEEEccCccCCC------------------CC-----CCC-HHHHHHHHHHHHHHHHcCCCCH
Confidence 99999999999998877644332 21 011 1222 34667888899998887
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.26 E-value=4.2 Score=27.64 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=8.1
Q ss_pred hhhhhHHHHHHHHHHHH
Q 005749 302 AGLVIGLMTGAVVFASL 318 (679)
Q Consensus 302 ~~iv~~~~~~~~~~~~l 318 (679)
...+++.++|+++++++
T Consensus 11 ~~~Ia~~vVGvll~vi~ 27 (44)
T 2jwa_A 11 LTSIISAVVGILLVVVL 27 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHH
Confidence 34455555554444443
No 457
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=63.99 E-value=4.8 Score=25.59 Aligned_cols=23 Identities=35% Similarity=0.567 Sum_probs=15.8
Q ss_pred CCCCcchhhhhHHHHHHHHHHHH
Q 005749 296 LSSGAIAGLVIGLMTGAVVFASL 318 (679)
Q Consensus 296 ~s~~~i~~iv~~~~~~~~~~~~l 318 (679)
++.+++++++++.+++.++++++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~ 26 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALA 26 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHH
Confidence 45677888888887765544443
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=48.22 E-value=20 Score=26.46 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=12.9
Q ss_pred hhhHHHHHHHHHHHHHHh
Q 005749 304 LVIGLMTGAVVFASLLIG 321 (679)
Q Consensus 304 iv~~~~~~~~~~~~l~~~ 321 (679)
+++|.++++++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 677777777777776665
No 459
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=35.88 E-value=45 Score=21.80 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=15.2
Q ss_pred CCCcchhhhhHHHHHHHHHHHHHHhh
Q 005749 297 SSGAIAGLVIGLMTGAVVFASLLIGY 322 (679)
Q Consensus 297 s~~~i~~iv~~~~~~~~~~~~l~~~~ 322 (679)
+.+.-.+.++|.+++.++-+.++...
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGI 30 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHH
Confidence 34445666777777766555544444
No 460
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=29.65 E-value=66 Score=22.84 Aligned_cols=12 Identities=8% Similarity=0.454 Sum_probs=5.0
Q ss_pred hhHHHHHHHHHH
Q 005749 305 VIGLMTGAVVFA 316 (679)
Q Consensus 305 v~~~~~~~~~~~ 316 (679)
++++++|+++++
T Consensus 13 i~svl~GLLLL~ 24 (54)
T 2l8s_A 13 LLSAFAGLLLLM 24 (54)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444433
No 461
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=28.00 E-value=14 Score=20.23 Aligned_cols=9 Identities=56% Similarity=1.464 Sum_probs=7.4
Q ss_pred CCcccccce
Q 005749 61 PLCQWRGLK 69 (679)
Q Consensus 61 ~~C~w~Gv~ 69 (679)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 479999975
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.74 E-value=4.1e+02 Score=29.07 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=46.9
Q ss_pred EEEEEecCCCChHHHhh----------cccCCCC---CCCHHHHHHHHHHHH--HHHHHHhcCCCCCeeecCCCCCCeee
Q 005749 450 LLIYDYFPSRTLHDLLH----------DTIAGKP---VLNWARRHKIALGIA--RGLAYLHTGHEIPITHGNVRSKNVLV 514 (679)
Q Consensus 450 ~lv~ey~~~gsL~~~l~----------~~~~~~~---~l~~~~~~~i~~~ia--~gL~~LH~~~~~~ivHrDlkp~NILl 514 (679)
.=+.|++++-++.+.+. ....... ...|..+..++..+| .-+.|+=.- +|=.++|||+
T Consensus 414 ~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILl 486 (614)
T 3ls8_A 414 HGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLL 486 (614)
T ss_dssp EEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEE
T ss_pred CceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeE
Confidence 33457777655555543 2211111 123566777777765 345666432 5888999999
Q ss_pred cCCCceEEeeccccc
Q 005749 515 DDFFVSRLTEFGLDQ 529 (679)
Q Consensus 515 ~~~~~~kl~DFGla~ 529 (679)
+.+|++-=+|||...
T Consensus 487 d~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 487 TKTGKLFHIDFGYIL 501 (614)
T ss_dssp CTTSCEEECCCSSCT
T ss_pred cCCCCEeeeehHHhh
Confidence 999999999999874
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.93 E-value=80 Score=22.45 Aligned_cols=12 Identities=17% Similarity=0.739 Sum_probs=5.0
Q ss_pred hhHHHHHHHHHH
Q 005749 305 VIGLMTGAVVFA 316 (679)
Q Consensus 305 v~~~~~~~~~~~ 316 (679)
++++++|+++++
T Consensus 16 i~svl~GLllL~ 27 (54)
T 2knc_A 16 LVGVLGGLLLLT 27 (54)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444433
Done!