Query 005750
Match_columns 679
No_of_seqs 710 out of 4464
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 06:26:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005750.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005750hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.1E-52 1.1E-56 439.0 20.3 260 357-635 41-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1E-52 3.6E-57 436.7 14.9 263 354-635 10-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 2.2E-52 7.4E-57 436.2 16.3 265 351-634 20-306 (308)
4 3omv_A RAF proto-oncogene seri 100.0 6.1E-51 2.1E-55 423.7 20.6 258 358-634 37-300 (307)
5 4b9d_A Serine/threonine-protei 100.0 1.1E-50 3.8E-55 427.8 17.3 249 358-627 25-276 (350)
6 4fih_A Serine/threonine-protei 100.0 1.8E-50 6.2E-55 425.5 18.5 248 358-627 75-323 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 2.6E-50 8.8E-55 423.1 18.9 260 359-643 60-325 (336)
8 3fpq_A Serine/threonine-protei 100.0 1.9E-49 6.5E-54 409.5 20.9 244 360-627 29-282 (290)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.4E-50 8.2E-55 418.4 13.7 246 358-626 33-283 (311)
10 4fie_A Serine/threonine-protei 100.0 2.5E-49 8.6E-54 426.9 20.1 248 358-627 152-400 (423)
11 4ase_A Vascular endothelial gr 100.0 1.5E-49 5.3E-54 421.9 15.7 265 354-636 61-349 (353)
12 3hyh_A Carbon catabolite-derep 100.0 4.1E-49 1.4E-53 403.5 18.3 244 358-627 14-262 (275)
13 3hmm_A TGF-beta receptor type- 100.0 1E-48 3.6E-53 408.8 18.8 267 359-636 5-299 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.1E-49 1.1E-53 409.9 10.6 246 358-627 25-281 (304)
15 4g31_A Eukaryotic translation 100.0 2.2E-47 7.7E-52 397.1 19.4 249 358-627 6-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.6E-45 5.4E-50 397.7 18.2 261 358-628 55-345 (398)
17 2qkw_B Protein kinase; three-h 100.0 1E-44 3.6E-49 382.2 23.8 277 358-637 40-318 (321)
18 4f9c_A Cell division cycle 7-r 100.0 3E-44 1E-48 383.6 21.1 194 358-562 22-249 (361)
19 3uim_A Brassinosteroid insensi 100.0 1.8E-44 6E-49 381.0 17.3 288 349-636 20-313 (326)
20 3uto_A Twitchin; kinase, muscl 100.0 7E-44 2.4E-48 403.2 19.6 250 358-627 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 1.2E-43 4.1E-48 399.3 19.3 246 359-627 191-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-42 6E-47 363.2 18.6 260 356-637 9-285 (310)
23 3p86_A Serine/threonine-protei 100.0 2.1E-42 7.3E-47 362.7 18.7 262 355-636 35-300 (309)
24 2psq_A Fibroblast growth facto 100.0 6.1E-42 2.1E-46 368.5 22.1 264 356-638 80-368 (370)
25 4hcu_A Tyrosine-protein kinase 100.0 3.2E-42 1.1E-46 353.5 18.5 256 357-634 10-266 (269)
26 3kul_A Ephrin type-A receptor 100.0 2.8E-42 9.4E-47 364.5 17.4 264 353-637 45-316 (325)
27 3fxz_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 356.6 20.0 248 358-627 21-269 (297)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-42 6.1E-47 355.0 15.0 259 355-635 6-265 (268)
29 2nru_A Interleukin-1 receptor- 100.0 3.9E-41 1.4E-45 352.1 24.7 279 348-634 14-306 (307)
30 3gen_A Tyrosine-protein kinase 100.0 9E-42 3.1E-46 352.7 19.1 260 355-636 22-282 (283)
31 3zgw_A Maternal embryonic leuc 100.0 5.5E-42 1.9E-46 365.0 17.0 249 357-628 10-261 (347)
32 4eqm_A Protein kinase; transfe 100.0 1.1E-41 3.7E-46 354.7 18.6 264 357-638 11-279 (294)
33 3soc_A Activin receptor type-2 100.0 2.4E-42 8.3E-47 364.4 13.8 266 357-635 24-319 (322)
34 3ugc_A Tyrosine-protein kinase 100.0 7.5E-43 2.6E-47 363.2 9.4 267 354-634 7-291 (295)
35 3fe3_A MAP/microtubule affinit 100.0 1.5E-41 5.2E-46 359.1 19.1 246 358-628 16-265 (328)
36 3tt0_A Basic fibroblast growth 100.0 2.4E-41 8.2E-46 365.5 19.7 273 353-644 65-362 (382)
37 2c30_A Serine/threonine-protei 100.0 8.8E-41 3E-45 352.4 23.1 247 360-628 48-295 (321)
38 3q4u_A Activin receptor type-1 100.0 5.2E-41 1.8E-45 349.9 20.7 260 357-632 8-300 (301)
39 4euu_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 349.3 24.6 273 358-635 10-310 (319)
40 1mp8_A Focal adhesion kinase 1 100.0 2.5E-41 8.7E-46 349.2 16.3 260 355-636 13-278 (281)
41 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-41 4E-46 367.3 14.3 259 356-635 113-375 (377)
42 2qol_A Ephrin receptor; recept 100.0 1.5E-41 5.2E-46 365.7 15.2 261 354-635 42-310 (373)
43 1qcf_A Haematopoetic cell kina 100.0 1E-41 3.5E-46 376.8 14.2 260 354-635 185-445 (454)
44 1o6l_A RAC-beta serine/threoni 100.0 7.4E-41 2.5E-45 355.1 20.0 247 358-628 6-261 (337)
45 3t9t_A Tyrosine-protein kinase 100.0 4.8E-41 1.7E-45 343.8 17.8 256 357-634 8-264 (267)
46 3kfa_A Tyrosine-protein kinase 100.0 2.7E-41 9.4E-46 349.8 16.1 262 354-636 10-273 (288)
47 3niz_A Rhodanese family protei 100.0 9E-41 3.1E-45 350.7 19.2 261 357-627 21-300 (311)
48 3tki_A Serine/threonine-protei 100.0 5.9E-41 2E-45 354.0 17.9 251 358-628 8-262 (323)
49 1opk_A P150, C-ABL, proto-onco 100.0 2.2E-41 7.6E-46 377.9 15.4 260 354-634 217-478 (495)
50 2yab_A Death-associated protei 100.0 2.9E-40 1E-44 353.7 22.8 249 358-627 13-272 (361)
51 1csn_A Casein kinase-1; phosph 100.0 2.5E-40 8.6E-45 344.2 21.7 264 357-637 10-286 (298)
52 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-41 9.3E-46 363.0 14.6 266 353-637 67-348 (367)
53 4e5w_A Tyrosine-protein kinase 100.0 8.5E-42 2.9E-46 356.2 10.3 267 353-633 17-301 (302)
54 2bdw_A Hypothetical protein K1 100.0 1.3E-40 4.4E-45 357.0 19.6 255 353-628 25-285 (362)
55 2ivs_A Proto-oncogene tyrosine 100.0 1E-40 3.5E-45 349.9 18.1 262 355-635 21-312 (314)
56 2y0a_A Death-associated protei 100.0 1.5E-40 5.2E-45 351.3 19.3 251 356-627 10-271 (326)
57 2izr_A Casein kinase I isoform 100.0 2.2E-40 7.5E-45 350.5 20.4 260 358-635 10-282 (330)
58 1luf_A Muscle-specific tyrosin 100.0 9.1E-41 3.1E-45 354.9 17.5 262 356-636 46-337 (343)
59 3dtc_A Mitogen-activated prote 100.0 1.3E-40 4.3E-45 341.7 17.8 250 357-632 7-271 (271)
60 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.5E-41 1.2E-45 372.2 14.7 260 355-636 182-442 (452)
61 2eva_A TAK1 kinase - TAB1 chim 100.0 2.2E-40 7.5E-45 347.0 19.9 261 357-640 8-269 (307)
62 1qpc_A LCK kinase; alpha beta 100.0 6.3E-41 2.1E-45 345.6 15.4 259 356-636 12-271 (279)
63 3qup_A Tyrosine-protein kinase 100.0 1.5E-40 5.1E-45 350.4 18.2 263 355-636 21-300 (323)
64 3vhe_A Vascular endothelial gr 100.0 8.2E-41 2.8E-45 357.7 16.3 263 355-635 20-356 (359)
65 4f0f_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 340.0 22.1 253 356-632 18-287 (287)
66 3soa_A Calcium/calmodulin-depe 100.0 3E-40 1E-44 363.0 21.2 253 356-628 10-268 (444)
67 3lb7_A RAF proto-oncogene seri 100.0 2.2E-40 7.4E-45 347.1 19.1 264 353-635 32-301 (307)
68 3poz_A Epidermal growth factor 100.0 9.1E-41 3.1E-45 353.1 16.2 260 354-635 12-279 (327)
69 3lxl_A Tyrosine-protein kinase 100.0 1.9E-41 6.5E-46 358.2 10.9 268 356-637 22-306 (327)
70 4dc2_A Protein kinase C IOTA t 100.0 2E-40 7E-45 358.5 19.2 249 357-622 52-307 (396)
71 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-40 8.6E-45 344.7 19.2 247 358-627 14-292 (298)
72 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.9E-45 351.5 16.7 250 358-628 6-258 (321)
73 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-40 6.5E-45 347.6 18.1 263 355-635 21-308 (313)
74 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-40 1.1E-44 364.4 20.8 252 357-635 193-446 (450)
75 3lxp_A Non-receptor tyrosine-p 100.0 4.7E-41 1.6E-45 353.9 13.5 262 360-637 34-313 (318)
76 3c0i_A Peripheral plasma membr 100.0 1.2E-40 4.2E-45 355.7 16.9 256 354-627 21-286 (351)
77 3cc6_A Protein tyrosine kinase 100.0 2.5E-40 8.6E-45 341.6 18.6 259 357-637 12-276 (281)
78 1ob3_A PFPK5, cell division co 100.0 2.2E-40 7.5E-45 343.5 17.4 259 359-627 4-280 (288)
79 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.5E-41 2.9E-45 356.9 14.5 250 354-627 20-280 (353)
80 4fvq_A Tyrosine-protein kinase 100.0 1.2E-40 4.1E-45 345.2 15.2 257 354-637 5-278 (289)
81 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-40 6.3E-45 350.6 16.6 248 363-627 17-270 (325)
82 3qd2_B Eukaryotic translation 100.0 4E-40 1.4E-44 347.8 19.1 250 357-627 6-325 (332)
83 1rjb_A FL cytokine receptor; k 100.0 1.5E-40 5.2E-45 353.6 15.9 266 354-637 42-337 (344)
84 2pvf_A Fibroblast growth facto 100.0 4.1E-40 1.4E-44 349.0 19.0 265 355-638 33-322 (334)
85 1kob_A Twitchin; kinase, intra 100.0 5.8E-40 2E-44 354.6 20.4 251 358-628 52-305 (387)
86 3o0g_A Cell division protein k 100.0 5.8E-40 2E-44 341.0 19.7 261 358-627 3-282 (292)
87 3a8x_A Protein kinase C IOTA t 100.0 5.8E-40 2E-44 349.5 20.1 248 358-622 10-264 (345)
88 3kmu_A ILK, integrin-linked ki 100.0 4E-40 1.4E-44 337.4 18.0 252 357-634 10-270 (271)
89 1u59_A Tyrosine-protein kinase 100.0 8.9E-40 3E-44 338.7 20.6 260 358-639 10-277 (287)
90 4fr4_A YANK1, serine/threonine 100.0 6.4E-40 2.2E-44 353.4 19.8 249 357-627 15-271 (384)
91 1fot_A TPK1 delta, CAMP-depend 100.0 5.1E-40 1.7E-44 346.0 18.5 243 358-627 7-258 (318)
92 3ll6_A Cyclin G-associated kin 100.0 6E-40 2E-44 347.2 19.0 261 354-637 25-311 (337)
93 3op5_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 349.3 21.5 270 355-636 33-331 (364)
94 1xjd_A Protein kinase C, theta 100.0 2.2E-40 7.4E-45 352.5 15.0 246 357-626 17-268 (345)
95 3a62_A Ribosomal protein S6 ki 100.0 6.1E-40 2.1E-44 346.9 18.3 248 356-627 16-276 (327)
96 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.6E-40 5.5E-45 352.2 13.9 245 358-628 10-259 (336)
97 3gni_B Strad alpha; kinase fol 100.0 9.7E-40 3.3E-44 353.7 20.3 269 358-632 26-340 (389)
98 4eut_A Serine/threonine-protei 100.0 8.9E-40 3E-44 354.9 19.9 271 358-635 10-310 (396)
99 2pmi_A Negative RE, cyclin-dep 100.0 6.1E-40 2.1E-44 345.3 18.0 263 357-627 5-293 (317)
100 2wqm_A Serine/threonine-protei 100.0 1.6E-39 5.3E-44 340.6 20.9 263 358-637 33-300 (310)
101 3og7_A AKAP9-BRAF fusion prote 100.0 4.5E-40 1.5E-44 341.4 16.6 264 352-634 19-288 (289)
102 3mdy_A Bone morphogenetic prot 100.0 2E-39 6.8E-44 343.5 21.8 268 352-636 32-333 (337)
103 3f66_A Hepatocyte growth facto 100.0 2E-39 6.7E-44 337.7 21.3 258 358-636 26-293 (298)
104 4aw2_A Serine/threonine-protei 100.0 4E-40 1.4E-44 360.8 16.9 254 358-628 75-339 (437)
105 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-40 4.5E-45 375.1 13.3 260 354-635 264-524 (535)
106 1b6c_B TGF-B superfamily recep 100.0 1.9E-39 6.5E-44 344.5 21.4 269 351-636 36-338 (342)
107 3v8s_A RHO-associated protein 100.0 2.4E-40 8.3E-45 359.8 14.8 251 358-628 70-330 (410)
108 3lzb_A Epidermal growth factor 100.0 6E-40 2.1E-44 346.9 16.8 258 356-635 14-279 (327)
109 1mqb_A Ephrin type-A receptor 100.0 9.8E-40 3.4E-44 346.2 18.4 262 354-636 41-311 (333)
110 2x4f_A Myosin light chain kina 100.0 7.9E-40 2.7E-44 352.2 18.0 251 362-632 94-349 (373)
111 3g2f_A Bone morphogenetic prot 100.0 7.3E-40 2.5E-44 347.0 17.4 274 357-643 13-327 (336)
112 3pls_A Macrophage-stimulating 100.0 3.7E-39 1.3E-43 335.4 22.3 260 359-638 23-291 (298)
113 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.5E-40 2.6E-44 349.2 17.3 243 358-627 42-293 (350)
114 2buj_A Serine/threonine-protei 100.0 1E-39 3.5E-44 343.0 18.0 262 356-634 28-306 (317)
115 2h34_A Serine/threonine-protei 100.0 2E-39 6.7E-44 340.1 20.0 260 357-636 34-298 (309)
116 3g33_A Cell division protein k 100.0 6.3E-40 2.1E-44 343.4 16.2 266 352-627 4-296 (308)
117 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-39 7.4E-44 333.7 19.9 250 356-627 8-261 (277)
118 3kex_A Receptor tyrosine-prote 100.0 3.7E-40 1.3E-44 348.1 14.4 257 357-635 13-277 (325)
119 4agu_A Cyclin-dependent kinase 100.0 7.8E-40 2.7E-44 342.9 16.8 264 358-628 4-285 (311)
120 2eue_A Carbon catabolite derep 100.0 1.1E-39 3.7E-44 335.8 17.5 244 358-627 14-262 (275)
121 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-39 4.3E-44 347.6 18.5 249 357-627 53-305 (349)
122 3uc3_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 349.4 18.2 252 357-628 20-275 (361)
123 2i0e_A Protein kinase C-beta I 100.0 8.5E-40 2.9E-44 349.1 16.9 249 355-627 18-276 (353)
124 2a19_B Interferon-induced, dou 100.0 1.6E-39 5.6E-44 335.4 18.5 257 351-638 5-278 (284)
125 2a2a_A Death-associated protei 100.0 4.2E-39 1.5E-43 339.3 22.0 251 356-627 11-272 (321)
126 3dbq_A Dual specificity protei 100.0 1.3E-39 4.4E-44 346.7 18.1 249 358-628 10-274 (343)
127 1p4o_A Insulin-like growth fac 100.0 5.9E-40 2E-44 345.6 15.3 262 354-634 22-299 (322)
128 3p1a_A MYT1 kinase, membrane-a 100.0 7.8E-40 2.7E-44 343.5 16.1 250 351-627 51-304 (311)
129 4hgt_A Casein kinase I isoform 100.0 4.6E-39 1.6E-43 334.2 21.6 265 356-637 8-283 (296)
130 3c1x_A Hepatocyte growth facto 100.0 1.5E-39 5.2E-44 349.9 18.5 258 359-637 91-358 (373)
131 3uzp_A CKI-delta, CKID, casein 100.0 6.6E-39 2.3E-43 333.1 22.6 263 358-637 10-283 (296)
132 3brb_A Proto-oncogene tyrosine 100.0 1.5E-39 5E-44 341.3 17.8 263 354-635 31-309 (313)
133 2vd5_A DMPK protein; serine/th 100.0 6.6E-40 2.3E-44 356.6 15.6 254 357-628 61-328 (412)
134 3ork_A Serine/threonine protei 100.0 4.4E-40 1.5E-44 345.3 13.5 260 357-635 12-282 (311)
135 1xbb_A Tyrosine-protein kinase 100.0 1.5E-39 5E-44 337.8 17.2 258 357-637 16-282 (291)
136 2xir_A Vascular endothelial gr 100.0 1.6E-39 5.4E-44 341.1 17.5 264 356-637 26-313 (316)
137 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-39 4.5E-44 343.9 17.0 266 356-635 40-323 (326)
138 2yex_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 330.2 21.1 251 357-627 7-261 (276)
139 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-39 4.7E-44 346.2 17.0 251 356-627 21-277 (342)
140 3is5_A Calcium-dependent prote 100.0 4.5E-39 1.5E-43 333.3 20.3 252 356-627 21-278 (285)
141 3hko_A Calcium/calmodulin-depe 100.0 1.3E-39 4.5E-44 346.4 16.7 256 356-627 25-330 (345)
142 3fdn_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 335.4 16.7 245 358-628 10-258 (279)
143 2v62_A Serine/threonine-protei 100.0 1.8E-39 6.2E-44 345.8 17.7 269 353-634 33-328 (345)
144 2jam_A Calcium/calmodulin-depe 100.0 3.6E-39 1.2E-43 337.0 19.6 250 356-627 8-261 (304)
145 3llt_A Serine/threonine kinase 100.0 2.7E-39 9.3E-44 346.2 19.0 263 352-627 30-355 (360)
146 1fvr_A Tyrosine-protein kinase 100.0 6.6E-40 2.3E-44 346.3 13.7 264 352-636 20-302 (327)
147 2jii_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 344.3 19.5 265 357-637 42-339 (352)
148 1byg_A CSK, protein (C-termina 100.0 1E-39 3.5E-44 336.5 14.4 253 357-636 21-275 (278)
149 2y94_A 5'-AMP-activated protei 100.0 3.2E-39 1.1E-43 357.3 19.3 245 358-627 17-266 (476)
150 2i1m_A Macrophage colony-stimu 100.0 1.5E-39 5E-44 344.4 15.8 263 356-636 45-328 (333)
151 2zmd_A Dual specificity protei 100.0 3.8E-39 1.3E-43 349.1 19.3 249 358-628 57-321 (390)
152 2r5t_A Serine/threonine-protei 100.0 1.2E-39 4E-44 350.5 15.1 250 357-630 38-292 (373)
153 3dls_A PAS domain-containing s 100.0 1.9E-39 6.5E-44 344.2 16.5 243 355-628 22-275 (335)
154 3kk8_A Calcium/calmodulin depe 100.0 3.6E-39 1.2E-43 333.2 17.9 249 358-627 7-261 (284)
155 3cok_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 333.1 16.8 247 358-627 12-262 (278)
156 2ozo_A Tyrosine-protein kinase 100.0 5.8E-39 2E-43 367.1 21.1 252 364-637 343-601 (613)
157 3gxj_A TGF-beta receptor type- 100.0 3.2E-41 1.1E-45 351.7 2.2 262 358-636 4-299 (303)
158 3bhy_A Death-associated protei 100.0 3.6E-39 1.2E-43 333.0 17.5 258 356-634 4-274 (283)
159 2ac3_A MAP kinase-interacting 100.0 4.3E-39 1.5E-43 338.1 18.1 257 359-627 14-295 (316)
160 2yfx_A Tyrosine-protein kinase 100.0 1.7E-39 5.7E-44 343.2 14.8 267 352-637 25-307 (327)
161 2rku_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 334.0 18.3 248 357-628 15-266 (294)
162 1u5q_A Serine/threonine protei 100.0 9.9E-39 3.4E-43 340.5 20.7 247 356-628 53-306 (348)
163 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-39 5.8E-44 343.7 14.7 260 357-627 34-318 (329)
164 2clq_A Mitogen-activated prote 100.0 7.5E-39 2.6E-43 332.5 19.2 248 362-627 27-278 (295)
165 4ejn_A RAC-alpha serine/threon 100.0 1.3E-39 4.5E-44 359.2 14.2 248 357-627 148-404 (446)
166 4aaa_A Cyclin-dependent kinase 100.0 2.2E-39 7.6E-44 343.0 15.2 261 358-627 26-306 (331)
167 3oz6_A Mitogen-activated prote 100.0 2.2E-39 7.4E-44 350.9 15.1 264 354-628 6-329 (388)
168 3lm5_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 339.2 18.1 258 352-628 23-288 (327)
169 2w5a_A Serine/threonine-protei 100.0 2.7E-39 9.2E-44 333.3 14.8 253 358-630 7-270 (279)
170 3eqc_A Dual specificity mitoge 100.0 3E-39 1E-43 346.0 15.7 266 354-628 30-325 (360)
171 3ttj_A Mitogen-activated prote 100.0 1.5E-38 5E-43 352.0 21.7 260 358-628 63-356 (464)
172 3a7i_A MST3 kinase, serine/thr 100.0 8.9E-39 3E-43 333.7 18.7 247 358-628 23-271 (303)
173 4fl3_A Tyrosine-protein kinase 100.0 4.7E-39 1.6E-43 368.8 18.1 249 363-634 375-631 (635)
174 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-39 8.2E-44 346.3 14.7 253 357-628 54-322 (355)
175 2vgo_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 333.6 15.3 245 357-627 14-262 (284)
176 1t4h_A Serine/threonine-protei 100.0 1.5E-38 5E-43 330.0 20.0 245 359-627 28-282 (290)
177 1x8b_A WEE1HU, WEE1-like prote 100.0 4.9E-39 1.7E-43 332.1 16.0 246 355-627 9-279 (289)
178 1nxk_A MAP kinase-activated pr 100.0 1.3E-38 4.3E-43 346.1 19.8 245 363-628 68-322 (400)
179 2owb_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43 340.3 17.0 247 357-627 41-291 (335)
180 2acx_A G protein-coupled recep 100.0 7.2E-39 2.5E-43 359.6 18.3 250 358-627 185-444 (576)
181 3rp9_A Mitogen-activated prote 100.0 1.5E-38 5.3E-43 351.9 20.7 192 357-555 53-279 (458)
182 3mtl_A Cell division protein k 100.0 1E-39 3.5E-44 344.6 10.2 260 358-627 3-281 (324)
183 2h6d_A 5'-AMP-activated protei 100.0 1.1E-38 3.7E-43 328.2 17.5 246 358-628 12-262 (276)
184 3mi9_A Cell division protein k 100.0 1.2E-38 4E-43 340.2 17.9 266 357-628 17-312 (351)
185 1ua2_A CAK, cell division prot 100.0 1.2E-38 4.2E-43 339.6 17.8 263 356-628 9-292 (346)
186 1u46_A ACK-1, activated CDC42 100.0 5.4E-39 1.9E-43 332.9 14.6 259 356-635 17-285 (291)
187 3i6u_A CDS1, serine/threonine- 100.0 9.9E-39 3.4E-43 349.1 17.4 254 353-627 131-399 (419)
188 2j7t_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 333.5 16.0 251 357-627 19-275 (302)
189 1cm8_A Phosphorylated MAP kina 100.0 1.1E-38 3.7E-43 342.8 17.1 259 358-632 26-314 (367)
190 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.7E-38 9.3E-43 339.3 20.1 253 356-635 64-340 (365)
191 3com_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 332.1 18.9 253 353-627 25-278 (314)
192 3mwu_A Calmodulin-domain prote 100.0 1.4E-38 4.9E-43 354.8 18.2 252 355-628 20-277 (486)
193 3nsz_A CK II alpha, casein kin 100.0 5.3E-38 1.8E-42 331.9 21.5 256 357-627 36-319 (330)
194 3lij_A Calcium/calmodulin depe 100.0 1.6E-38 5.3E-43 355.2 17.9 257 355-633 35-299 (494)
195 3fme_A Dual specificity mitoge 100.0 1E-38 3.6E-43 330.6 15.2 252 356-627 6-266 (290)
196 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.6E-38 8.8E-43 354.2 19.4 252 359-627 187-448 (543)
197 3sv0_A Casein kinase I-like; t 100.0 7E-38 2.4E-42 347.2 22.6 262 358-636 8-280 (483)
198 3nyv_A Calmodulin-domain prote 100.0 9.7E-39 3.3E-43 356.0 15.8 253 354-628 23-282 (484)
199 1wak_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 344.1 17.1 267 351-627 31-391 (397)
200 2wtk_C Serine/threonine-protei 100.0 6.6E-38 2.3E-42 327.2 20.9 249 358-628 6-264 (305)
201 3n9x_A Phosphotransferase; mal 100.0 5.1E-38 1.7E-42 345.0 20.7 197 358-561 27-253 (432)
202 3byv_A Rhoptry kinase; malaria 100.0 1.2E-39 4.3E-44 351.4 7.7 247 358-634 74-368 (377)
203 2ycf_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 331.5 19.3 254 353-627 6-274 (322)
204 2y7j_A Phosphorylase B kinase 100.0 7E-38 2.4E-42 336.2 20.8 250 357-627 94-359 (365)
205 2r3i_A Cell division protein k 100.0 4.1E-38 1.4E-42 327.8 17.7 262 358-627 4-283 (299)
206 2vwi_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 333.8 11.7 257 357-627 15-287 (303)
207 2j0j_A Focal adhesion kinase 1 100.0 3.5E-38 1.2E-42 362.9 18.3 261 354-636 387-653 (656)
208 3q5i_A Protein kinase; CDPK, m 100.0 2.7E-38 9.3E-43 354.1 16.8 250 357-628 36-302 (504)
209 3pg1_A Mitogen-activated prote 100.0 2E-38 6.8E-43 339.8 15.1 261 357-628 22-317 (362)
210 3eb0_A Putative uncharacterize 100.0 1.6E-38 5.4E-43 343.5 14.3 265 357-634 7-330 (383)
211 3pfq_A PKC-B, PKC-beta, protei 100.0 4E-38 1.4E-42 363.5 18.5 248 356-627 340-597 (674)
212 2xrw_A Mitogen-activated prote 100.0 1.5E-37 5.2E-42 334.3 21.7 258 358-628 26-319 (371)
213 3qyz_A Mitogen-activated prote 100.0 2E-37 7E-42 332.4 22.3 260 358-628 28-314 (364)
214 4e7w_A Glycogen synthase kinas 100.0 2.5E-38 8.5E-43 343.2 15.2 260 358-628 41-322 (394)
215 1phk_A Phosphorylase kinase; g 100.0 7.3E-38 2.5E-42 325.7 18.1 249 358-627 18-283 (298)
216 2fst_X Mitogen-activated prote 100.0 1.5E-38 5E-43 341.6 13.1 257 357-628 29-312 (367)
217 1zy4_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 323.1 20.4 250 357-627 6-283 (303)
218 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-38 4.5E-43 342.6 12.4 251 359-627 64-352 (371)
219 1z57_A Dual specificity protei 100.0 8.5E-38 2.9E-42 330.7 18.2 263 356-628 13-329 (339)
220 3rgf_A Cyclin-dependent kinase 100.0 9.5E-38 3.2E-42 340.0 19.0 265 358-628 21-334 (405)
221 2x7f_A TRAF2 and NCK-interacti 100.0 6.3E-38 2.2E-42 330.7 17.0 249 358-627 25-286 (326)
222 3an0_A Dual specificity mitoge 100.0 6.6E-38 2.3E-42 332.8 17.1 251 357-627 51-310 (340)
223 3kvw_A DYRK2, dual specificity 100.0 1.2E-37 4.2E-42 341.5 19.6 198 357-564 97-303 (429)
224 2pml_X PFPK7, Ser/Thr protein 100.0 5.8E-38 2E-42 334.1 16.4 258 357-627 31-322 (348)
225 1q8y_A SR protein kinase; tran 100.0 2.2E-37 7.6E-42 332.7 20.9 273 355-637 17-345 (373)
226 1blx_A Cyclin-dependent kinase 100.0 6E-38 2.1E-42 330.7 16.1 260 358-627 12-296 (326)
227 2i6l_A Mitogen-activated prote 100.0 2.7E-38 9.1E-43 332.0 13.0 259 358-627 12-305 (320)
228 3cek_A Dual specificity protei 100.0 1.6E-37 5.4E-42 325.9 18.7 252 355-628 26-293 (313)
229 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.9E-38 2E-42 329.7 14.9 257 357-636 33-304 (319)
230 1j1b_A Glycogen synthase kinas 100.0 5.4E-38 1.8E-42 343.4 14.6 258 358-627 55-336 (420)
231 3e3p_A Protein kinase, putativ 100.0 1E-37 3.5E-42 333.8 16.1 266 354-628 20-315 (360)
232 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-37 3.8E-42 332.6 15.2 259 358-627 12-305 (353)
233 4exu_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 330.1 20.6 254 358-628 43-324 (371)
234 2wei_A Calmodulin-domain prote 100.0 1.9E-37 6.3E-42 321.3 16.3 254 352-627 17-276 (287)
235 3coi_A Mitogen-activated prote 100.0 2.9E-37 9.8E-42 329.8 18.2 254 358-628 25-306 (353)
236 2vx3_A Dual specificity tyrosi 100.0 7.6E-37 2.6E-41 330.2 21.2 200 357-564 54-262 (382)
237 2eu9_A Dual specificity protei 100.0 2.6E-37 9E-42 329.3 16.4 262 353-627 15-333 (355)
238 3aln_A Dual specificity mitoge 100.0 2.9E-37 1E-41 325.9 15.3 253 358-627 23-285 (327)
239 3fhr_A MAP kinase-activated pr 100.0 5.9E-37 2E-41 325.2 16.8 254 358-631 29-293 (336)
240 2rio_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 335.5 17.6 248 361-627 19-295 (434)
241 3qa8_A MGC80376 protein; kinas 100.0 5E-37 1.7E-41 348.2 15.3 270 356-635 13-310 (676)
242 2iwi_A Serine/threonine-protei 100.0 2.3E-37 7.9E-42 324.4 11.3 243 353-627 27-283 (312)
243 2dyl_A Dual specificity mitoge 100.0 2.2E-36 7.5E-41 317.4 17.6 250 357-627 25-283 (318)
244 3a99_A Proto-oncogene serine/t 100.0 6E-37 2.1E-41 322.8 12.6 240 356-627 42-293 (320)
245 3p23_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 328.9 16.6 247 358-627 25-283 (432)
246 3uqc_A Probable conserved tran 100.0 3.6E-35 1.2E-39 304.2 19.8 236 355-637 29-268 (286)
247 2pzi_A Probable serine/threoni 100.0 1.3E-35 4.5E-40 344.1 16.5 241 356-634 79-328 (681)
248 2vuw_A Serine/threonine-protei 100.0 1.4E-35 4.8E-40 314.4 13.1 243 354-626 17-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 2.3E-34 8E-39 299.9 18.9 224 359-627 19-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 7.4E-35 2.5E-39 317.8 14.6 239 359-627 80-363 (413)
251 4azs_A Methyltransferase WBDD; 99.9 5.7E-29 1.9E-33 281.2 5.8 187 363-560 240-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.1E-25 1.1E-29 249.2 6.4 183 362-561 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.7E-22 9.2E-27 206.8 8.6 141 361-533 94-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 8.8E-19 3E-23 178.1 9.3 135 360-509 50-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.7 1.5E-17 5.3E-22 173.9 10.2 150 117-266 3-161 (313)
256 4ecn_A Leucine-rich repeat pro 99.6 4E-16 1.4E-20 183.4 12.9 158 103-265 249-526 (876)
257 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 6E-21 168.1 8.5 138 359-510 97-266 (397)
258 4eco_A Uncharacterized protein 99.6 4.4E-16 1.5E-20 178.8 11.1 146 116-265 26-284 (636)
259 2wfh_A SLIT homolog 2 protein 99.6 5.8E-15 2E-19 142.9 11.3 121 148-270 10-142 (193)
260 1w8a_A SLIT protein; signaling 99.6 6.1E-15 2.1E-19 142.6 10.3 123 148-270 8-142 (192)
261 3rgz_A Protein brassinosteroid 99.5 1.9E-15 6.6E-20 177.3 6.2 111 160-270 631-743 (768)
262 3e6j_A Variable lymphocyte rec 99.5 1.8E-14 6.1E-19 143.4 12.3 108 141-252 15-131 (229)
263 2o6r_A Variable lymphocyte rec 99.5 2.3E-14 7.9E-19 136.5 11.5 126 143-270 3-140 (177)
264 2v70_A SLIT-2, SLIT homolog 2 99.5 4.7E-14 1.6E-18 139.5 10.5 111 160-270 56-169 (220)
265 2v9t_B SLIT homolog 2 protein 99.5 6.8E-14 2.3E-18 138.3 11.6 110 160-270 55-168 (220)
266 4fcg_A Uncharacterized protein 99.4 2.2E-14 7.6E-19 150.9 3.6 147 117-265 24-194 (328)
267 3g39_A Variable lymphocyte rec 99.4 2.7E-13 9.2E-18 128.3 10.4 104 163-270 11-118 (170)
268 3rgz_A Protein brassinosteroid 99.4 1E-13 3.6E-18 162.6 8.8 131 116-251 8-145 (768)
269 2r9u_A Variable lymphocyte rec 99.4 5.2E-13 1.8E-17 126.9 11.1 103 164-270 15-121 (174)
270 3g39_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 127.4 9.4 102 148-249 9-119 (170)
271 2o6s_A Variable lymphocyte rec 99.4 7.6E-13 2.6E-17 129.3 11.9 121 144-266 4-136 (208)
272 1p9a_G Platelet glycoprotein I 99.4 8.2E-13 2.8E-17 136.3 12.1 110 160-270 99-211 (290)
273 2v9t_B SLIT homolog 2 protein 99.4 1.1E-12 3.6E-17 129.7 10.4 121 147-267 10-141 (220)
274 3oja_A Leucine-rich immune mol 99.4 4.6E-13 1.6E-17 148.6 8.5 107 160-269 143-252 (487)
275 3m19_A Variable lymphocyte rec 99.4 2.4E-12 8.2E-17 129.7 12.2 109 160-269 82-194 (251)
276 2ifg_A High affinity nerve gro 99.4 6.1E-13 2.1E-17 140.8 8.2 102 166-270 13-119 (347)
277 1ogq_A PGIP-2, polygalacturona 99.4 1.7E-13 5.8E-18 143.1 3.7 109 162-270 198-307 (313)
278 2o6s_A Variable lymphocyte rec 99.4 3.2E-12 1.1E-16 124.9 12.0 110 160-270 51-164 (208)
279 2v70_A SLIT-2, SLIT homolog 2 99.3 1.7E-12 5.8E-17 128.2 9.4 120 148-267 11-142 (220)
280 1w8a_A SLIT protein; signaling 99.3 1.2E-12 4E-17 126.5 7.8 91 160-250 53-144 (192)
281 2r9u_A Variable lymphocyte rec 99.3 3.2E-12 1.1E-16 121.4 10.4 90 160-250 32-122 (174)
282 3rfs_A Internalin B, repeat mo 99.3 4.7E-12 1.6E-16 129.2 12.3 112 160-271 108-222 (272)
283 4fcg_A Uncharacterized protein 99.3 1.3E-12 4.4E-17 137.4 8.1 108 160-268 182-291 (328)
284 2o6q_A Variable lymphocyte rec 99.3 5.1E-12 1.7E-16 128.8 12.2 111 160-271 108-222 (270)
285 4g8a_A TOLL-like receptor 4; l 99.3 2.4E-12 8E-17 147.1 10.1 112 160-271 468-584 (635)
286 2xot_A Amphoterin-induced prot 99.3 3.1E-12 1.1E-16 136.3 8.5 108 161-270 88-205 (361)
287 2o6q_A Variable lymphocyte rec 99.3 7.1E-12 2.4E-16 127.7 10.1 127 139-266 6-145 (270)
288 2ell_A Acidic leucine-rich nuc 99.3 3.3E-12 1.1E-16 120.2 6.7 105 160-266 23-132 (168)
289 3m19_A Variable lymphocyte rec 99.3 1.4E-11 4.7E-16 124.1 11.3 106 160-266 34-143 (251)
290 2je0_A Acidic leucine-rich nuc 99.3 2.4E-12 8.1E-17 118.6 5.1 104 161-266 17-125 (149)
291 3v47_A TOLL-like receptor 5B a 99.3 7.9E-12 2.7E-16 137.1 9.5 112 159-271 297-412 (455)
292 2z66_A Variable lymphocyte rec 99.3 9.6E-12 3.3E-16 129.0 9.3 111 160-270 149-264 (306)
293 1ozn_A Reticulon 4 receptor; N 99.2 8.5E-12 2.9E-16 128.1 8.6 110 160-270 128-241 (285)
294 3zyj_A Leucine-rich repeat-con 99.2 1.3E-11 4.6E-16 134.9 10.0 110 159-271 183-296 (440)
295 2z81_A CD282 antigen, TOLL-lik 99.2 9.2E-12 3.1E-16 140.0 8.7 118 147-265 3-134 (549)
296 2ifg_A High affinity nerve gro 99.2 1.5E-11 5.1E-16 130.0 9.4 103 144-247 4-118 (347)
297 4g8a_A TOLL-like receptor 4; l 99.2 8.3E-12 2.8E-16 142.5 7.9 106 160-266 51-160 (635)
298 3vq2_A TLR4, TOLL-like recepto 99.2 1.1E-11 3.8E-16 141.2 8.0 111 160-271 447-562 (606)
299 2xot_A Amphoterin-induced prot 99.2 2.3E-11 8E-16 129.5 9.8 120 148-267 18-149 (361)
300 1p9a_G Platelet glycoprotein I 99.2 5E-11 1.7E-15 122.9 11.6 107 159-267 75-185 (290)
301 3zyi_A Leucine-rich repeat-con 99.2 2.1E-11 7.2E-16 133.9 9.0 110 159-271 194-307 (452)
302 3v47_A TOLL-like receptor 5B a 99.2 1.5E-11 5.2E-16 134.9 7.4 125 143-267 2-142 (455)
303 2o6r_A Variable lymphocyte rec 99.2 3.2E-11 1.1E-15 114.6 8.7 90 160-249 51-141 (177)
304 3tm0_A Aminoglycoside 3'-phosp 99.2 2.8E-11 9.4E-16 122.6 8.7 140 359-507 16-212 (263)
305 2z80_A TOLL-like receptor 2, v 99.2 2.3E-11 8E-16 128.9 8.4 116 147-265 29-160 (353)
306 3e6j_A Variable lymphocyte rec 99.2 4.4E-11 1.5E-15 118.8 9.7 109 160-270 63-175 (229)
307 3rfs_A Internalin B, repeat mo 99.2 8.7E-11 3E-15 119.8 11.8 107 160-267 84-194 (272)
308 4eco_A Uncharacterized protein 99.2 4.1E-11 1.4E-15 137.4 10.3 107 161-269 488-602 (636)
309 2wfh_A SLIT homolog 2 protein 99.2 4.8E-11 1.6E-15 115.2 8.5 88 160-247 53-141 (193)
310 2z62_A TOLL-like receptor 4, v 99.1 5.9E-11 2E-15 121.2 9.1 107 160-266 27-136 (276)
311 1dce_A Protein (RAB geranylger 99.1 4.5E-11 1.5E-15 134.7 8.3 102 162-267 442-546 (567)
312 1xku_A Decorin; proteoglycan, 99.1 8.2E-11 2.8E-15 123.4 9.9 106 161-268 192-307 (330)
313 3j0a_A TOLL-like receptor 5; m 99.1 2E-11 7E-16 144.6 5.2 107 161-270 451-563 (844)
314 2id5_A Lingo-1, leucine rich r 99.1 1.1E-10 3.9E-15 128.8 10.8 119 149-267 12-141 (477)
315 3zyi_A Leucine-rich repeat-con 99.1 1E-10 3.6E-15 128.3 10.4 115 150-265 56-182 (452)
316 4ecn_A Leucine-rich repeat pro 99.1 8.2E-11 2.8E-15 138.3 10.1 106 161-268 728-841 (876)
317 4b8c_D Glucose-repressible alc 99.1 5.2E-11 1.8E-15 138.3 8.2 105 160-267 223-329 (727)
318 2xwt_C Thyrotropin receptor; s 99.1 4.4E-11 1.5E-15 119.4 6.3 104 160-265 30-141 (239)
319 3o6n_A APL1; leucine-rich repe 99.1 3.3E-11 1.1E-15 129.5 5.8 107 161-269 248-354 (390)
320 3oja_B Anopheles plasmodium-re 99.1 3.4E-11 1.2E-15 137.0 5.8 107 161-269 254-360 (597)
321 1dce_A Protein (RAB geranylger 99.1 6E-11 2E-15 133.7 7.5 89 159-249 461-550 (567)
322 3vq2_A TLR4, TOLL-like recepto 99.1 1.5E-10 5E-15 131.9 10.7 107 160-266 31-140 (606)
323 2id5_A Lingo-1, leucine rich r 99.1 6.8E-11 2.3E-15 130.6 7.3 109 161-270 224-336 (477)
324 1ozn_A Reticulon 4 receptor; N 99.1 2E-10 7E-15 117.7 10.4 108 160-267 104-214 (285)
325 1a9n_A U2A', U2A'; complex (nu 99.1 8.9E-11 3.1E-15 111.4 7.1 102 161-267 19-126 (176)
326 2z63_A TOLL-like receptor 4, v 99.1 1.1E-10 3.8E-15 131.7 9.1 112 160-271 420-535 (570)
327 4ezg_A Putative uncharacterize 99.1 7.8E-11 2.7E-15 114.0 6.7 104 160-265 87-192 (197)
328 1nd4_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.2E-15 117.3 8.2 130 364-507 26-213 (264)
329 3t6q_A CD180 antigen; protein- 99.1 1.6E-10 5.6E-15 131.5 9.6 129 139-267 2-142 (606)
330 3t6q_A CD180 antigen; protein- 99.1 1.1E-10 3.6E-15 133.1 8.0 109 161-270 449-563 (606)
331 4b8c_D Glucose-repressible alc 99.1 4.2E-11 1.4E-15 139.1 4.4 93 160-254 246-338 (727)
332 2z62_A TOLL-like receptor 4, v 99.1 2.9E-10 9.8E-15 116.0 10.1 105 161-265 52-160 (276)
333 2ft3_A Biglycan; proteoglycan, 99.1 1.1E-10 3.9E-15 122.5 7.2 106 161-268 193-308 (332)
334 2ell_A Acidic leucine-rich nuc 99.1 1E-10 3.4E-15 110.0 5.8 88 161-250 71-164 (168)
335 3j0a_A TOLL-like receptor 5; m 99.1 1.6E-10 5.4E-15 137.0 8.9 108 159-266 22-135 (844)
336 3oja_B Anopheles plasmodium-re 99.1 3.7E-10 1.3E-14 128.5 11.3 105 160-265 98-203 (597)
337 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 2.7E-10 9.2E-15 128.6 10.0 109 160-270 376-513 (562)
338 2je0_A Acidic leucine-rich nuc 99.1 5.5E-11 1.9E-15 109.4 3.5 89 159-250 40-130 (149)
339 2ft3_A Biglycan; proteoglycan, 99.0 3.3E-10 1.1E-14 118.9 9.7 116 147-266 32-159 (332)
340 3o53_A Protein LRIM1, AGAP0063 99.0 1.4E-10 4.9E-15 120.9 6.8 107 160-269 143-252 (317)
341 1wwl_A Monocyte differentiatio 99.0 5.9E-11 2E-15 123.6 3.8 106 160-265 94-212 (312)
342 1ziw_A TOLL-like receptor 3; i 99.0 3.7E-10 1.3E-14 130.5 10.3 91 181-271 532-626 (680)
343 1a9n_A U2A', U2A'; complex (nu 99.0 9.6E-11 3.3E-15 111.2 4.3 87 161-251 42-131 (176)
344 3zyj_A Leucine-rich repeat-con 99.0 4.1E-10 1.4E-14 123.1 9.9 115 150-265 45-171 (440)
345 3o6n_A APL1; leucine-rich repe 99.0 7.7E-10 2.7E-14 118.8 11.4 105 160-265 92-197 (390)
346 2z7x_B TOLL-like receptor 1, v 99.0 3.6E-10 1.2E-14 126.2 8.7 109 160-270 347-484 (520)
347 2z81_A CD282 antigen, TOLL-lik 99.0 6.5E-10 2.2E-14 124.9 10.6 108 160-270 386-513 (549)
348 2z66_A Variable lymphocyte rec 99.0 6E-10 2E-14 115.4 8.9 108 160-268 125-237 (306)
349 1xku_A Decorin; proteoglycan, 99.0 7.5E-10 2.6E-14 116.0 9.3 115 148-266 31-157 (330)
350 1h6u_A Internalin H; cell adhe 99.0 3.5E-10 1.2E-14 117.5 6.0 105 159-268 127-231 (308)
351 4ezg_A Putative uncharacterize 99.0 4.5E-10 1.5E-14 108.6 6.3 102 161-265 44-147 (197)
352 3a79_B TLR6, VLRB.59, TOLL-lik 99.0 7.3E-10 2.5E-14 125.1 9.0 104 160-266 51-158 (562)
353 2z7x_B TOLL-like receptor 1, v 99.0 3.9E-10 1.3E-14 125.9 6.5 109 159-267 322-434 (520)
354 1ziw_A TOLL-like receptor 3; i 99.0 1E-09 3.6E-14 126.7 10.2 85 161-245 25-110 (680)
355 4glp_A Monocyte differentiatio 99.0 1.9E-10 6.4E-15 119.7 3.1 107 160-267 168-285 (310)
356 1wwl_A Monocyte differentiatio 99.0 3.2E-10 1.1E-14 118.1 4.8 104 161-265 173-285 (312)
357 3cvr_A Invasion plasmid antige 98.9 8.5E-10 2.9E-14 123.9 7.7 109 142-265 40-151 (571)
358 2xwt_C Thyrotropin receptor; s 98.9 9.2E-10 3.2E-14 109.7 7.1 103 161-265 80-190 (239)
359 3oja_A Leucine-rich immune mol 98.9 4.1E-10 1.4E-14 124.8 4.5 106 159-266 56-181 (487)
360 3dxp_A Putative acyl-COA dehyd 98.9 2E-09 6.7E-14 114.3 9.3 141 362-508 43-248 (359)
361 2z63_A TOLL-like receptor 4, v 98.9 2.2E-09 7.7E-14 120.9 10.4 86 161-246 76-163 (570)
362 2z80_A TOLL-like receptor 2, v 98.9 1.5E-09 5.2E-14 114.8 8.3 105 160-266 75-186 (353)
363 4ay9_X Follicle-stimulating ho 98.9 1.8E-09 6.1E-14 114.3 8.7 107 146-253 7-124 (350)
364 4glp_A Monocyte differentiatio 98.8 2E-09 6.8E-14 111.8 6.4 84 162-245 92-182 (310)
365 4fmz_A Internalin; leucine ric 98.8 2E-09 6.7E-14 113.5 5.9 104 160-268 220-325 (347)
366 1h6t_A Internalin B; cell adhe 98.8 3.6E-09 1.2E-13 108.9 7.6 102 160-268 111-214 (291)
367 1h6t_A Internalin B; cell adhe 98.8 4.9E-09 1.7E-13 107.9 8.5 101 160-265 89-189 (291)
368 1h6u_A Internalin H; cell adhe 98.8 5.1E-09 1.8E-13 108.7 8.7 102 160-267 106-208 (308)
369 1xeu_A Internalin C; cellular 98.8 7.6E-09 2.6E-13 104.8 9.5 101 160-267 62-163 (263)
370 1xeu_A Internalin C; cellular 98.8 7.5E-09 2.6E-13 104.8 9.2 100 160-267 40-141 (263)
371 3sg8_A APH(2'')-ID; antibiotic 98.8 1.4E-09 4.8E-14 112.7 3.7 185 363-561 26-288 (304)
372 3cvr_A Invasion plasmid antige 98.8 9.9E-09 3.4E-13 115.3 10.0 96 161-268 140-244 (571)
373 1m9s_A Internalin B; cell inva 98.8 6.3E-09 2.2E-13 118.0 8.1 101 160-267 108-210 (605)
374 1m9s_A Internalin B; cell inva 98.8 8.1E-09 2.8E-13 117.1 8.6 100 161-265 87-186 (605)
375 3o53_A Protein LRIM1, AGAP0063 98.8 1.7E-09 5.7E-14 112.8 2.4 100 161-267 34-133 (317)
376 1ds9_A Outer arm dynein; leuci 98.8 8.1E-11 2.8E-15 114.0 -7.6 104 160-268 47-154 (198)
377 1o6v_A Internalin A; bacterial 98.7 8.5E-09 2.9E-13 113.5 7.0 82 160-246 264-345 (466)
378 3bz5_A Internalin-J, INLJ; leu 98.7 2.8E-08 9.6E-13 109.0 10.5 95 161-264 64-158 (457)
379 3g06_A SSPH2 (leucine-rich rep 98.7 3.7E-08 1.3E-12 111.9 11.0 75 185-267 221-297 (622)
380 1o6v_A Internalin A; bacterial 98.7 1.8E-08 6.3E-13 110.8 8.3 101 161-266 243-343 (466)
381 1jl5_A Outer protein YOPM; leu 98.7 5.1E-08 1.7E-12 106.9 10.8 97 161-266 131-227 (454)
382 3bz5_A Internalin-J, INLJ; leu 98.7 3.6E-08 1.2E-12 108.2 9.5 90 159-257 168-257 (457)
383 1ds9_A Outer arm dynein; leuci 98.7 5.5E-10 1.9E-14 108.0 -4.5 102 161-266 18-127 (198)
384 3g06_A SSPH2 (leucine-rich rep 98.7 8E-08 2.8E-12 109.1 12.2 54 208-267 221-274 (622)
385 1jl5_A Outer protein YOPM; leu 98.6 2.5E-08 8.5E-13 109.4 7.0 62 185-253 317-380 (454)
386 4fmz_A Internalin; leucine ric 98.6 2.7E-08 9.3E-13 104.7 6.5 102 160-267 198-300 (347)
387 2ca6_A RAN GTPase-activating p 98.5 5E-09 1.7E-13 112.3 -2.5 84 162-245 160-257 (386)
388 2ca6_A RAN GTPase-activating p 98.5 5.7E-09 2E-13 111.8 -2.6 108 161-268 187-317 (386)
389 3r70_A Aminoglycoside phosphot 98.5 3E-07 1E-11 95.8 10.3 132 362-508 42-237 (320)
390 3rw6_A Nuclear RNA export fact 98.4 5.6E-08 1.9E-12 98.0 3.0 66 182-249 167-237 (267)
391 3goz_A Leucine-rich repeat-con 98.4 2E-08 7E-13 106.6 -1.1 105 161-265 22-149 (362)
392 4gkh_A Aminoglycoside 3'-phosp 98.4 7.7E-07 2.6E-11 90.0 10.4 135 364-508 31-223 (272)
393 3tdw_A Gentamicin resistance p 98.4 1.6E-06 5.4E-11 89.7 11.8 135 363-508 25-224 (306)
394 3d1u_A Putative fructosamine-3 98.3 1.3E-06 4.4E-11 89.5 9.1 75 362-440 20-97 (288)
395 2ast_B S-phase kinase-associat 98.3 1.1E-07 3.9E-12 99.3 1.1 103 161-264 70-178 (336)
396 3rw6_A Nuclear RNA export fact 98.3 1.1E-07 3.6E-12 95.9 0.5 79 160-239 169-258 (267)
397 4ay9_X Follicle-stimulating ho 98.2 1.7E-06 5.8E-11 91.2 8.7 101 162-264 129-233 (350)
398 2ast_B S-phase kinase-associat 98.2 1.1E-07 3.8E-12 99.4 -0.7 111 149-265 38-153 (336)
399 3goz_A Leucine-rich repeat-con 98.2 1E-07 3.6E-12 101.1 -1.1 102 165-266 2-121 (362)
400 3ats_A Putative uncharacterize 98.2 2.6E-06 9E-11 89.9 8.8 80 363-442 26-122 (357)
401 3ovc_A Hygromycin-B 4-O-kinase 98.1 5E-06 1.7E-10 88.1 9.7 74 362-441 46-122 (362)
402 3sb4_A Hypothetical leucine ri 98.0 6.1E-06 2.1E-10 86.1 6.9 92 161-255 226-319 (329)
403 1z7x_W Ribonuclease inhibitor; 98.0 3.2E-07 1.1E-11 100.3 -4.2 108 160-267 283-411 (461)
404 2q83_A YTAA protein; 2635576, 97.9 1.9E-05 6.6E-10 82.3 9.5 140 363-507 38-251 (346)
405 1z7x_W Ribonuclease inhibitor; 97.9 1.4E-07 4.9E-12 103.1 -7.5 85 161-245 227-326 (461)
406 2olc_A MTR kinase, methylthior 97.9 2.6E-05 9E-10 83.5 9.2 75 362-438 35-120 (397)
407 3un9_A NLR family member X1; l 97.8 1.4E-06 5E-11 92.6 -3.2 84 162-245 127-224 (372)
408 2pyw_A Uncharacterized protein 97.7 3.9E-05 1.3E-09 82.9 7.0 79 477-556 231-312 (420)
409 3jr1_A Putative fructosamine-3 97.7 0.00016 5.4E-09 74.7 10.6 137 363-504 42-232 (312)
410 3f7w_A Putative fructosamine-3 97.6 0.00011 3.9E-09 74.8 9.1 74 362-439 20-96 (288)
411 2jwp_A Malectin, MGC80075; sug 97.6 2.1E-05 7.3E-10 73.9 3.1 98 2-109 58-170 (174)
412 3un9_A NLR family member X1; l 97.6 4.9E-06 1.7E-10 88.5 -2.0 85 161-245 101-196 (372)
413 1io0_A Tropomodulin; LRR prote 97.4 1.1E-05 3.8E-10 76.7 -1.6 85 161-245 36-136 (185)
414 3ogk_B Coronatine-insensitive 97.4 1.1E-05 3.9E-10 90.9 -2.9 107 160-266 402-525 (592)
415 1io0_A Tropomodulin; LRR prote 97.3 1.2E-05 4.2E-10 76.4 -3.1 85 161-245 65-164 (185)
416 3csv_A Aminoglycoside phosphot 97.3 0.00056 1.9E-08 71.1 9.0 141 363-508 24-217 (333)
417 2ppq_A HSK, HK, homoserine kin 97.3 0.00078 2.7E-08 69.5 9.9 142 363-507 28-216 (322)
418 1nw1_A Choline kinase (49.2 KD 97.2 0.00083 2.9E-08 72.6 9.1 72 363-440 79-159 (429)
419 3feg_A Choline/ethanolamine ki 97.1 0.0011 3.8E-08 70.2 9.4 141 363-508 56-254 (379)
420 1zyl_A Hypothetical protein YI 97.1 0.003 1E-07 65.3 12.6 141 364-508 33-223 (328)
421 3dxq_A Choline/ethanolamine ki 97.1 0.00065 2.2E-08 69.6 7.4 71 362-440 23-95 (301)
422 3rfe_A Platelet glycoprotein I 97.0 0.00073 2.5E-08 60.0 6.0 55 165-221 12-68 (130)
423 3ogk_B Coronatine-insensitive 97.0 0.00019 6.5E-09 80.8 2.6 78 162-240 165-251 (592)
424 3e4g_A ATP synthase subunit S, 97.0 6.6E-05 2.3E-09 70.2 -1.4 83 161-243 61-150 (176)
425 2qg7_A Ethanolamine kinase PV0 97.0 0.0026 9E-08 69.1 10.5 73 363-440 114-188 (458)
426 2p1m_B Transport inhibitor res 97.0 4.2E-05 1.4E-09 86.2 -3.9 106 160-266 396-518 (594)
427 2yle_A Protein spire homolog 1 96.9 0.0042 1.5E-07 59.5 10.5 104 438-560 33-136 (229)
428 2p1m_B Transport inhibitor res 96.9 7.3E-05 2.5E-09 84.2 -2.7 83 161-243 105-195 (594)
429 3sb4_A Hypothetical leucine ri 96.9 0.001 3.4E-08 69.0 6.1 77 161-239 250-328 (329)
430 3i1a_A Spectinomycin phosphotr 96.8 0.005 1.7E-07 64.2 11.0 68 366-440 32-108 (339)
431 3c5i_A Choline kinase; choline 96.7 0.003 1E-07 66.6 8.6 73 363-440 39-121 (369)
432 3rfe_A Platelet glycoprotein I 96.7 0.0022 7.6E-08 56.8 6.1 49 189-240 12-63 (130)
433 2ra8_A Uncharacterized protein 96.5 0.00028 9.5E-09 74.4 -1.3 106 160-265 192-318 (362)
434 3f2s_A CK, chetk-alpha, cholin 96.4 0.0099 3.4E-07 63.2 10.0 141 363-507 58-279 (401)
435 2ra8_A Uncharacterized protein 96.4 0.00025 8.7E-09 74.7 -2.5 105 159-266 170-291 (362)
436 4fdw_A Leucine rich hypothetic 96.3 0.0054 1.9E-07 65.5 7.5 100 161-265 248-356 (401)
437 4fdw_A Leucine rich hypothetic 96.0 0.008 2.7E-07 64.2 6.5 89 161-254 226-320 (401)
438 3mes_A Choline kinase; malaria 94.9 0.079 2.7E-06 56.7 9.6 140 363-508 76-291 (424)
439 1pgv_A TMD-1, tropomodulin TMD 93.8 0.0066 2.3E-07 57.7 -1.6 84 161-244 41-138 (197)
440 3g15_A CK, chetk-alpha, cholin 93.1 0.33 1.1E-05 51.5 10.2 30 479-508 245-280 (401)
441 3e4g_A ATP synthase subunit S, 93.1 0.014 4.9E-07 54.3 -0.5 70 176-245 52-128 (176)
442 4h09_A Hypothetical leucine ri 92.5 0.16 5.6E-06 53.2 6.8 88 161-253 240-329 (379)
443 4fs7_A Uncharacterized protein 92.1 0.14 4.8E-06 54.1 5.7 70 180-254 292-363 (394)
444 4gt6_A Cell surface protein; l 91.8 0.38 1.3E-05 50.7 8.6 87 162-254 266-354 (394)
445 4gt6_A Cell surface protein; l 90.6 0.33 1.1E-05 51.2 6.6 81 161-245 288-370 (394)
446 4h09_A Hypothetical leucine ri 90.3 0.41 1.4E-05 50.0 7.0 88 162-254 218-307 (379)
447 1pgv_A TMD-1, tropomodulin TMD 89.8 0.023 7.8E-07 53.9 -3.0 84 161-244 70-169 (197)
448 2ks1_B Epidermal growth factor 87.9 0.29 1E-05 33.8 2.3 15 280-294 14-28 (44)
449 4fs7_A Uncharacterized protein 87.7 0.36 1.2E-05 50.9 4.2 79 160-242 296-376 (394)
450 2jwa_A Receptor tyrosine-prote 85.5 0.28 9.6E-06 33.7 1.2 24 278-301 12-35 (44)
451 2l2t_A Receptor tyrosine-prote 81.4 0.61 2.1E-05 32.1 1.6 15 280-294 12-27 (44)
452 4ann_A ESSB; membrane protein, 81.4 3.3 0.00011 39.4 7.3 115 411-561 43-158 (215)
453 4ano_A ESSB; membrane protein, 77.2 7.1 0.00024 37.2 8.1 114 411-561 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 74.0 0.37 1.3E-05 52.1 -2.0 59 361-422 146-213 (463)
455 2k1k_A Ephrin type-A receptor 59.9 3.1 0.00011 27.7 1.1 24 278-301 11-34 (38)
456 3ls8_A Phosphatidylinositol 3- 46.6 1.8E+02 0.0062 32.0 13.0 84 416-507 402-501 (614)
457 1cja_A Protein (actin-fragmin 39.0 1.8E+02 0.0062 29.4 10.6 137 362-508 74-237 (342)
458 2jwa_A Receptor tyrosine-prote 32.3 29 0.001 23.8 2.4 28 283-310 14-41 (44)
459 2ks1_B Epidermal growth factor 26.5 46 0.0016 22.8 2.6 16 282-297 12-27 (44)
460 2lz0_A Uncharacterized protein 21.8 1.3E+02 0.0043 24.4 5.1 37 204-241 16-52 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.1e-52 Score=439.03 Aligned_cols=260 Identities=26% Similarity=0.427 Sum_probs=209.2
Q ss_pred HHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
..+.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34566789999999999999875 478999999987766777889999999999999999999999999999999
Q ss_pred EEEecCCCcHhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcE
Q 005750 431 VYEYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA 498 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 498 (679)
|||||++|+|.++++... ...++++.+++.|+.||++||+|||+ ++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997542 23469999999999999999999999 999999999999999999999
Q ss_pred EEeeccCccccccCc-ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHH
Q 005750 499 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 576 (679)
Q Consensus 499 kL~Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 576 (679)
||+|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~-- 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAIDC-- 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHHHH--
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHHHH--
Confidence 999999998764432 223344569999999999999999999999999999999999 8999974322 122222
Q ss_pred HhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 577 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 577 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
+..+... ..+...+..+.+|+.+||+.||++||||+||++.|+.+.+.
T Consensus 273 --i~~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 --ITQGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp --HHHTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --HHcCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 2222211 11223345788999999999999999999999999988763
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1e-52 Score=436.73 Aligned_cols=263 Identities=27% Similarity=0.458 Sum_probs=216.4
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
|....+.+.++||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++.
T Consensus 10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 33445667899999999999999864 478899999987766777889999999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc
Q 005750 428 RILVYEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 497 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 497 (679)
.++|||||++|+|.++|+... ....+++.+++.|+.||++||+|||+ ++|+||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCc
Confidence 999999999999999997531 24579999999999999999999999 99999999999999999999
Q ss_pred EEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHH
Q 005750 498 AKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWA 575 (679)
Q Consensus 498 ~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~ 575 (679)
+||+|||+|+....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+..
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~-- 241 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIE-- 241 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHH--
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH--
Confidence 99999999987544322 22333458999999999999999999999999999999999 8999974322 12222
Q ss_pred HHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 576 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 576 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
.+..+.... .+...+.++.+|+.+||+.||++|||++||++.|+++...
T Consensus 242 --~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 --CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp --HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 222222211 1223345788999999999999999999999999987653
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-52 Score=436.20 Aligned_cols=265 Identities=24% Similarity=0.409 Sum_probs=216.5
Q ss_pred hhHHHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCccccccccc
Q 005750 351 LPELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCE 423 (679)
Q Consensus 351 ~~~l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 423 (679)
+.++...+++|.++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.
T Consensus 20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 33455566788999999999999999863 468999999975433 34578999999999999999999999999
Q ss_pred ccceEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCc
Q 005750 424 EEHQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 490 (679)
Q Consensus 424 ~~~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NI 490 (679)
+++..++|||||++|+|.++|.... ....+++..++.|+.|||+||+|||+ ++|+||||||+||
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NI 176 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNV 176 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccce
Confidence 9999999999999999999996432 12468999999999999999999999 9999999999999
Q ss_pred cccCCCcEEEeeccCccccccCc-ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccch
Q 005750 491 LLDINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 568 (679)
Q Consensus 491 ll~~~~~~kL~Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~ 568 (679)
|+++++.+||+|||+++...... ........||+.|+|||++.++.++.++|||||||++|||+| |+.||.+...
T Consensus 177 Ll~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--- 253 (308)
T 4gt4_A 177 LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--- 253 (308)
T ss_dssp EECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---
T ss_pred EECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---
Confidence 99999999999999998764332 223344568999999999999999999999999999999998 8999974332
Q ss_pred hhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 569 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
..+.+. +..+.... .+...+..+.+|+.+||+.||++||||+||++.|+....
T Consensus 254 ~~~~~~----i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 254 QDVVEM----IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHHHHH----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHHHHH----HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 222222 22232211 122344578899999999999999999999999987654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-51 Score=423.71 Aligned_cols=258 Identities=31% Similarity=0.511 Sum_probs=203.5
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.+.+.++||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||+++|++.+ +..++|||||
T Consensus 37 ~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~ 113 (307)
T 3omv_A 37 EVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC 113 (307)
T ss_dssp SCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcC
Confidence 34678999999999999998763 5999998643 33456789999999999999999999999865 4689999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc-c
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T 514 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~-~ 514 (679)
++|+|.++++.. ...+++.+++.|+.|||.||+|||+ ++|+||||||+|||+++++.+||+|||+|+...... .
T Consensus 114 ~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 114 EGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp SSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999743 4579999999999999999999999 999999999999999999999999999998754322 2
Q ss_pred cccccccCCccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 515 HISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~---~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.......||+.|||||++.+ ..++.++|||||||++|||+||+.||...... ..+.. .+..+.. .|.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~----~~~~~~~----~p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIF----MVGRGYA----SPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHH----HHHTTCC----CCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHH----HHhcCCC----CCC
Confidence 22344579999999999854 46899999999999999999999999743221 11111 2222211 111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
+ .......+..+.+|+.+||+.||++||||+||++.|+.+..
T Consensus 259 ~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 259 L-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp S-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred c-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1 12223345578999999999999999999999999987754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-50 Score=427.77 Aligned_cols=249 Identities=26% Similarity=0.394 Sum_probs=202.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.++||+|+||+||+|++. +|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4788899999999999999876 6999999999754 234567899999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
|+||+|.+++... ....+++..++.|+.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999743 34568999999999999999999999 9999999999999999999999999999987654322
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
.....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+. .+....... +.... .
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~-~~~~~-----~-- 245 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLKIIS-GSFPP-----V-- 245 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHH-TCCCC-----C--
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHc-CCCCC-----C--
Confidence 22345699999999999999999999999999999999999999974332 122222222 22211 1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+......+.+||.+||+.||++|||++|+++
T Consensus 246 --~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 --SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122346889999999999999999999986
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.8e-50 Score=425.51 Aligned_cols=248 Identities=24% Similarity=0.340 Sum_probs=207.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+|||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3667789999999999999986 699999999976555556678899999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
||+|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+........
T Consensus 155 gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 226 (346)
T 4fih_A 155 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 226 (346)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-
T ss_pred CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-
Confidence 9999999973 469999999999999999999999 99999999999999999999999999999876554332
Q ss_pred cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750 517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 596 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 596 (679)
....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.. ..... +..+.... + ..
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~----i~~~~~~~-----~--~~ 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKM----IRDNLPPR-----L--KN 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSSCCC-----C--SC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHH----HHcCCCCC-----C--Cc
Confidence 34457999999999999999999999999999999999999999743221 12221 11111111 0 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.......+.+|+.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122347889999999999999999999876
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.6e-50 Score=423.12 Aligned_cols=260 Identities=24% Similarity=0.271 Sum_probs=209.2
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCC
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 437 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~ 437 (679)
+.+.++||+|+||.||+|+++ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 456788999999999999986 699999999975422 24699999999999999999999999999999999999
Q ss_pred CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC-cEEEeeccCccccccCccc-
Q 005750 438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 515 (679)
Q Consensus 438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfgla~~~~~~~~~- 515 (679)
|+|.++++. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ ++||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999974 4579999999999999999999999 9999999999999999887 6999999999876543221
Q ss_pred ---ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 516 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 516 ---~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.....+||+.|||||++.+..++.++|||||||++|||+||+.||......... .. ... +...
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~----i~~-~~~~------- 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC--LK----IAS-EPPP------- 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH--HH----HHH-SCCG-------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH--HH----HHc-CCCC-------
Confidence 123356999999999999999999999999999999999999999754332211 11 111 1110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcCCCCcc
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKF 643 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~ 643 (679)
....+......+.+++.+||+.||.+|||++|+++.|...+.....-.-+|
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw 325 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW 325 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCS
T ss_pred chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCC
Confidence 001122334578899999999999999999999999988877544443344
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-49 Score=409.48 Aligned_cols=244 Identities=29% Similarity=0.438 Sum_probs=197.7
Q ss_pred hhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccc----cceEEEEE
Q 005750 360 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 432 (679)
Q Consensus 360 ~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lV~ 432 (679)
+|.++||+|+||+||+|.+. +++.||+|++... .....+.|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999876 6899999998643 23455779999999999999999999999864 45689999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCcccc-CCCcEEEeeccCcccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQA 509 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kL~Dfgla~~~ 509 (679)
|||+||+|.+++.. ...+++..+..++.||+.||+|||+ ++ |+||||||+|||++ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999984 4679999999999999999999998 77 99999999999998 4799999999999864
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
... .....+||+.|||||++.+ .++.++|||||||++|||+||+.||..... ...+ ...+..+.....++
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~----~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQI----YRRVTSGVKPASFD 252 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHH----HHHHTTTCCCGGGG
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHH----HHHHHcCCCCCCCC
Confidence 432 2334579999999999876 599999999999999999999999963322 1111 12222222111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+ ....++.+++.+||+.||++|||++|+++
T Consensus 253 ~--------~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 K--------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c--------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11236889999999999999999999976
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.4e-50 Score=418.41 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=206.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||+||+|+++ +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4788999999999999999876 69999999997532 2345679999999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
||+||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999984 4679999999999999999999999 999999999999999999999999999998765432
Q ss_pred -ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 -~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.......+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.. .+. .... .+.. .+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~---~~i~-~~~~------~~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LIF---AKII-KLEY------DF 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---HHHH-HTCC------CC
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHHH-cCCC------CC
Confidence 22344567999999999999999999999999999999999999999743321 111 1111 2221 11
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 626 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 626 (679)
...+ ..++.+|+.+||+.||++|||++|++
T Consensus 254 p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKF----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred Cccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1122 34688999999999999999999974
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-49 Score=426.93 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=207.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.++||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|+|||||+
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 3667889999999999999986 699999999976555556778999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
||+|.++++. ..+++..+..++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+|+........
T Consensus 232 gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 303 (423)
T 4fie_A 232 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 303 (423)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-
T ss_pred CCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-
Confidence 9999999973 459999999999999999999999 99999999999999999999999999999876554332
Q ss_pred cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750 517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 596 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 596 (679)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... ..... +..+.... +. .
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~----i~~~~~~~-----~~--~ 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKM----IRDNLPPR-----LK--N 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSCCCC-----CS--C
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHH----HHcCCCCC-----Cc--c
Confidence 33457999999999999999999999999999999999999999743221 11221 11111111 10 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.......+.+||.+||+.||++|||++|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122346889999999999999999999976
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-49 Score=421.95 Aligned_cols=265 Identities=26% Similarity=0.409 Sum_probs=215.1
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcC------CcEEEEEEecCCcc-hhHHHHHHHHHHHHhccC-CCcccccccccc-
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEE- 424 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~- 424 (679)
+....+++.+.||+|+||.||+|.+.. ++.||||++..... ...+.|.+|+++|.+++| ||||+++|+|.+
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 444567889999999999999998753 36899999976543 445779999999999965 999999999866
Q ss_pred cceEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcc
Q 005750 425 EHQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 491 (679)
Q Consensus 425 ~~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIl 491 (679)
++..++|||||++|+|.++|+... ....+++..++.++.|||+||+|||+ ++||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCcccee
Confidence 456899999999999999997532 13458999999999999999999999 99999999999999
Q ss_pred ccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchh
Q 005750 492 LDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 569 (679)
Q Consensus 492 l~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~ 569 (679)
+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+.....
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999876543322 2334568999999999999999999999999999999998 999997433221
Q ss_pred hHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 570 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
.+ ...+..+.... .+...+.++.+++.+||+.||++|||++||++.|+++++..
T Consensus 296 ~~----~~~i~~g~~~~---------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 296 EF----CRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HH----HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HH----HHHHHcCCCCC---------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 12 22233332211 11223457889999999999999999999999999988753
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.1e-49 Score=403.53 Aligned_cols=244 Identities=25% Similarity=0.378 Sum_probs=191.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||+||+|+.. +|+.||+|++.+.. ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 5788899999999999999876 69999999997542 2335679999999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 6899999873 5679999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
......||+.|+|||++.+..+ +.++||||+||++|+|+||+.||...+.. .+.+ .+..+.. .+
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---~~~~----~i~~~~~------~~ 231 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---VLFK----NISNGVY------TL 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCC------CC
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCC------CC
Confidence 2234569999999999988776 58999999999999999999999743221 1111 1222221 11
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... ....+.+++.+||+.||++|||++|+++
T Consensus 232 p~~----~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC----CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 2346789999999999999999999987
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-48 Score=408.78 Aligned_cols=267 Identities=25% Similarity=0.383 Sum_probs=201.1
Q ss_pred HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc----eEEEEEEe
Q 005750 359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY 434 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lV~E~ 434 (679)
+.+.++||+|+||+||+|+++ |+.||||++.... .....+..|+..+.+++|||||++++++.+++ ..++||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456789999999999999985 8999999996432 22223345666677889999999999997653 57999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-----CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
|++|+|.++++. ..+++..+.+++.|++.||+|||+. ...+|+||||||+|||++.++.+||+|||+|+..
T Consensus 83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999973 4689999999999999999999972 1239999999999999999999999999999876
Q ss_pred ccCccc---ccccccCCccccCCcccCCC------CCCchhHHHHHHHHHHHHHhCCCCCCcccccc---------hhhH
Q 005750 510 EEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFGA---------ELNI 571 (679)
Q Consensus 510 ~~~~~~---~~~~~~gt~~y~aPE~l~~~------~~s~ksDVwSlGvll~elltG~~pf~~~~~~~---------~~~~ 571 (679)
...... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||....... ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12235699999999998764 46789999999999999999988775322110 0111
Q ss_pred HHHHHHhHhcCCeeeeecccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 572 VHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 572 ~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
.+ ....+..+. ++|.+... ...+.+..+.+|+.+||+.||++||||+||++.|+++.+.+
T Consensus 239 ~~-~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EE-MRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HH-HHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HH-HHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 11 222221111 12222111 12356678999999999999999999999999999887643
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.1e-49 Score=409.93 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=195.5
Q ss_pred HHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
.|++.+.||+|+||+||+|+.. +++.||||++++.. ......+.+|+++|++++|||||++++++.+++..|+|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 5788999999999999999863 47899999997542 22344688899999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
||||+||+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999984 4679999999999999999999999 9999999999999999999999999999986543
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
... .....+||+.|+|||++.+..++.++||||+||++|||+||+.||.+.+.. .. ..... .+.. .
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~---~~~i~-~~~~------~ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---ET---MTMIL-KAKL------G 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHH-HCCC------C
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---HH---HHHHH-cCCC------C
Confidence 322 223457999999999999999999999999999999999999999743321 11 11112 1211 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 627 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 627 (679)
. +......+.+++.+||+.||++|||+ +|+++
T Consensus 245 ~----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 M----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 11223468899999999999999985 56553
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-47 Score=397.12 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=189.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccc---------
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--------- 426 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--------- 426 (679)
.|++.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 4677899999999999999976 69999999986543 344577999999999999999999999986543
Q ss_pred ---eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeec
Q 005750 427 ---QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 503 (679)
Q Consensus 427 ---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 503 (679)
..|+|||||++|+|.+++.........++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 478999999999999999854333445677788999999999999999 99999999999999999999999999
Q ss_pred cCccccccCccc-----------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHH
Q 005750 504 GLSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 572 (679)
Q Consensus 504 gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~ 572 (679)
|+|+........ .....+||+.|||||++.+..++.++|||||||++|||++ ||.... ...
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHH
Confidence 999876543221 1123469999999999999999999999999999999996 775211 111
Q ss_pred HHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 573 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 573 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.... .+........ .......+.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~~-~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLT-DVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 1122221111 1122335678999999999999999999976
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-45 Score=397.71 Aligned_cols=261 Identities=20% Similarity=0.308 Sum_probs=200.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCccccccccc------ccceE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE------EEHQR 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~------~~~~~ 428 (679)
.|++.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++. +.+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4778899999999999999886 79999999997543 334567889999999999999999999865 34678
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
|+|||||+ |+|.+++. ....+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+.
T Consensus 135 ~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999995 68999997 45689999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCc---ccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 509 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 509 ~~~~~---~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
..... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+. ...+.........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~---l~~I~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ---LQLIMMVLGTPSP 284 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH---HHHHHHHHCCCCG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH---HHHHHHhcCCCCh
Confidence 64322 1223446799999999998775 569999999999999999999999985443221 1111111110000
Q ss_pred ee--eec--------ccccC--CCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 585 IS--IVD--------PVLIG--NVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 585 ~~--~~d--------~~l~~--~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.. .+. ..+.. ..+ ......+.+|+.+||+.||.+|||++|+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 000 00000 000 0112467899999999999999999999863
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1e-44 Score=382.17 Aligned_cols=277 Identities=41% Similarity=0.716 Sum_probs=241.9
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 437 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~ 437 (679)
.|++.+.||+|+||.||+|++++++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 40 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (321)
T 2qkw_B 40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN 119 (321)
T ss_dssp CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTT
T ss_pred ccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCC
Confidence 34557899999999999999888999999998876666778899999999999999999999999999999999999999
Q ss_pred CcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc-cc
Q 005750 438 GTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 515 (679)
Q Consensus 438 gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~-~~ 515 (679)
|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++....... ..
T Consensus 120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 99999997543 23468999999999999999999999 999999999999999999999999999998654322 22
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 595 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 595 (679)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||.............|.......+.....+++.+...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 22334589999999999888999999999999999999999999986555555566777766667777777888888777
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
........+.+++.+||+.||++|||++||++.|+.+....+
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 888899999999999999999999999999999999988654
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3e-44 Score=383.56 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=167.4
Q ss_pred HHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
.|++.++||+|+||+||+|+.+ +++.||+|++.+.. ...++.+|+++|+.+ +||||+++++++.+.++.|+||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4778899999999999999864 46889999986543 345678999999998 6999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC-CcEEEeeccCcccccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 511 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfgla~~~~~ 511 (679)
||+++|+|.+++. .+++.++..++.||+.||+|||+ +||+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999984 38899999999999999999999 999999999999999876 8999999999976543
Q ss_pred Cccc---------------------------ccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCc
Q 005750 512 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSV 562 (679)
Q Consensus 512 ~~~~---------------------------~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~ 562 (679)
.... .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2111 11234699999999998775 589999999999999999999999963
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-44 Score=381.02 Aligned_cols=288 Identities=39% Similarity=0.698 Sum_probs=242.0
Q ss_pred CChhHHHHHH--HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCccccccccccc
Q 005750 349 IPLPELEEAT--NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 425 (679)
Q Consensus 349 ~~~~~l~~~~--~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 425 (679)
+++.++.... |.+.+.||+|+||.||+|+.++++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 4455555544 445789999999999999988899999999876432 2234689999999999999999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeecc
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 504 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 504 (679)
+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 179 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence 99999999999999999998654 34469999999999999999999999222299999999999999999999999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccc--cchhhHHHHHHHhHhcC
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--GAELNIVHWARSMIKKG 582 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~--~~~~~~~~~~~~~~~~~ 582 (679)
++...............||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .......+|+.......
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch
Confidence 9987765544445555699999999999888899999999999999999999999963221 13345677777777777
Q ss_pred CeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 583 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 583 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
......+..+...........+.+++.+||+.||.+|||++||++.|++....+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred hhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 777788888888888899999999999999999999999999999999755443
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7e-44 Score=403.17 Aligned_cols=250 Identities=21% Similarity=0.348 Sum_probs=208.3
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 4778899999999999999886 699999999987666667889999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC--CcEEEeeccCccccccCcc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kL~Dfgla~~~~~~~~ 514 (679)
||+|.+++.. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 238 gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999864 24579999999999999999999999 999999999999999854 8999999999998754332
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+... . ... +...... +.+....
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~---~~~-i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---T---LRN-VKSCDWN--MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---H---HHH-HHTTCCC--CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---H---HHH-HHhCCCC--CCccccc
Confidence 234569999999999999999999999999999999999999997443221 1 111 1111110 1111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ...+.+||.+||+.||.+|||++|+++
T Consensus 382 ~~----s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 GI----SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22 346789999999999999999999987
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-43 Score=399.30 Aligned_cols=246 Identities=22% Similarity=0.274 Sum_probs=197.5
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHH---HHHHHHhccCCCcccccccccccceEEEE
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVT---EVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
|++.+.||+|+||.||+|+.+ +|+.||||++.+.. ......+.+ ++.+++.++|||||+++++|.+.+..|+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 566789999999999999887 69999999996432 112223333 45666777899999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
||||+||+|.+++.. ...+++..++.++.||+.||+|||+ +|||||||||+|||++.+|++||+|||+|+....
T Consensus 271 mEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp ECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999984 4679999999999999999999999 9999999999999999999999999999987654
Q ss_pred CcccccccccCCccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 512 DLTHISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~-~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
.. ....+||+.|+|||++. +..|+.++||||+||++|||++|+.||.+........+.. ... ....
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~---~i~-~~~~------ 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---MTL-TMAV------ 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH---HHH-HCCC------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---hhc-CCCC------
Confidence 33 23457999999999996 4579999999999999999999999997443332222221 111 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 627 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 627 (679)
.. +......+.+||.+||+.||.+|++ ++||++
T Consensus 412 ~~----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 EL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CC----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11 1122346889999999999999998 677764
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=363.15 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=214.2
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
...|.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 345667899999999999999886 6899999998776667778899999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 89 IKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999753 4679999999999999999999999 9999999999999999999999999999987644322
Q ss_pred cc-------------cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch---hhHHHHHHHh
Q 005750 515 HI-------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSM 578 (679)
Q Consensus 515 ~~-------------~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~---~~~~~~~~~~ 578 (679)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|..||........ .........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~- 242 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR- 242 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH-
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc-
Confidence 11 1134689999999999999999999999999999999999999874322211 111111111
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.. +...+..+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 243 ------------~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 243 ------------YC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ------------TC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------------cC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 11122358899999999999999999999999999877543
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.1e-42 Score=362.74 Aligned_cols=262 Identities=34% Similarity=0.511 Sum_probs=204.3
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
....|++.+.||+|+||+||+|++. |+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3456778899999999999999874 8899999987543 334567899999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||+++|+|.+++........+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.+||+|||++....
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 999999999999853322349999999999999999999998 88 9999999999999999999999999997654
Q ss_pred cCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+. ......
T Consensus 191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~~---~~~~~~----- 258 (309)
T 3p86_A 191 STFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAVG---FKCKRL----- 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHHH---HSCCCC-----
T ss_pred cccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH---hcCCCC-----
Confidence 3322 123345899999999999999999999999999999999999999743221 1111111 111110
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+......+.+++.+||+.+|.+|||++|+++.|+.+....
T Consensus 259 ----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 ----EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 111222346889999999999999999999999999988753
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.1e-42 Score=368.47 Aligned_cols=264 Identities=24% Similarity=0.452 Sum_probs=214.7
Q ss_pred HHHHhhccccCcCccEEEEEEEEc--------CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhc-cCCCccccccccccc
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 425 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~ 425 (679)
...|.+.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 355677899999999999999863 356799999976533 3457899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 492 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll 492 (679)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999997542 12458999999999999999999999 999999999999999
Q ss_pred cCCCcEEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhh
Q 005750 493 DINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 570 (679)
Q Consensus 493 ~~~~~~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~ 570 (679)
+.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999986544322 12223346789999999999999999999999999999999 999997443321
Q ss_pred HHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcC
Q 005750 571 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 638 (679)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 638 (679)
+... +..+... ..+......+.+++.+||+.+|.+|||++|+++.|+++......
T Consensus 314 ~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 314 LFKL----LKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHH----HHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHH----HhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 2221 2222111 11222345788999999999999999999999999999886543
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-42 Score=353.51 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=212.6
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
..|++.+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 45677899999999999999998899999999976533 34678999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 99999999742 4568999999999999999999999 999999999999999999999999999998765443333
Q ss_pred cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750 517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 595 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 595 (679)
.....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .... . +..+.. . .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~---~-~~~~~~-----~----~ 227 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE---D-ISTGFR-----L----Y 227 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---H-HHTTCC-----C----C
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHH---H-HhcCcc-----C----C
Confidence 334456788999999998899999999999999999999 99999743221 1111 1 111110 0 0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
.+......+.+++.+||+.+|.+|||++|+++.|+++..
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111123468899999999999999999999999999876
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=364.54 Aligned_cols=264 Identities=26% Similarity=0.485 Sum_probs=213.2
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCC-cchhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
++....|++.+.||+|+||.||+|.+. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 445567788899999999999999885 3556999999765 33455789999999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999642 4579999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 508 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 508 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
........ ......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...... ..... +..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~----~~~~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVISS----VEEGYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHH----HHTTCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HHcCCC
Confidence 76543222 1222335778999999998899999999999999999999 99999733221 11111 111111
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
...+......+.+++.+||+.||.+|||++||++.|+.+....+
T Consensus 273 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 ---------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ---------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 11122234578899999999999999999999999999987544
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.3e-42 Score=356.58 Aligned_cols=248 Identities=24% Similarity=0.374 Sum_probs=205.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.+.||+|+||+||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 4667789999999999999864 689999999876555556788999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
+|+|.+++.. ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999973 358999999999999999999999 99999999999999999999999999999876543332
Q ss_pred cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750 517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 596 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 596 (679)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......+.. .. ..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~~-~~-------~~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTP-EL-------QN 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCSC-CC-------SC
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCCC-CC-------CC
Confidence 2344689999999999999999999999999999999999999974322111 1111111111 00 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+......+.+++.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1223346889999999999999999999986
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.8e-42 Score=355.02 Aligned_cols=259 Identities=28% Similarity=0.455 Sum_probs=213.5
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
....|++.+.||+|+||.||+|.++++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3456778899999999999999999888999999975433 346789999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999753 3468999999999999999999999 9999999999999999999999999999987655443
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||....... .. .. +..+.. ...
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~---~~-~~~~~~--~~~---- 226 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE---VV---LK-VSQGHR--LYR---- 226 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH---HH-HHTTCC--CCC----
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH---HH---HH-HHcCCC--CCC----
Confidence 33334456778999999988889999999999999999999 999997433211 11 11 111111 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
+......+.+++.+||+.+|.+|||++|+++.|+.+...
T Consensus 227 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 227 ---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ---CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ---CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 111234688999999999999999999999999988764
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.9e-41 Score=352.12 Aligned_cols=279 Identities=37% Similarity=0.591 Sum_probs=225.8
Q ss_pred cCChhHHHHHHHhhc--------cccCcCccEEEEEEEEcCCcEEEEEEecCCc----chhHHHHHHHHHHHHhccCCCc
Q 005750 348 FIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNL 415 (679)
Q Consensus 348 ~~~~~~l~~~~~~~~--------~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnI 415 (679)
.+++.++...+.+|. +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 456889999988885 5699999999999987 58899999986532 3345789999999999999999
Q ss_pred ccccccccccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC
Q 005750 416 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 495 (679)
Q Consensus 416 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~ 495 (679)
+++++++.+.+..++||||+++|+|.+++........+++..++.++.|++.||+|||+ ++|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCC
Confidence 99999999999999999999999999999765456679999999999999999999999 999999999999999999
Q ss_pred CcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 005750 496 MRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 574 (679)
Q Consensus 496 ~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 574 (679)
+.+||+|||++......... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||........ ...+
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~ 246 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 246 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHHH
Confidence 99999999999875543221 2233468999999999876 578999999999999999999999974433221 1111
Q ss_pred HHHhHh-cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 575 ARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 575 ~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
...... ...+...+++.+ ..........+.+++.+||+.+|.+|||++||++.|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111111 112233344333 34456777889999999999999999999999999998754
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9e-42 Score=352.71 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=211.7
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
....|++.+.||+|+||.||+|.+.++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3456778899999999999999999889999999976533 346789999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 101 MANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999999753 3569999999999999999999999 9999999999999999999999999999987654433
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... ...+. +..+.. .
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~-----~--- 240 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEH----IAQGLR-----L--- 240 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHH----HHTTCC-----C---
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHH----HhcccC-----C---
Confidence 33333446788999999998889999999999999999998 99999743321 11111 111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+......+.+++.+||+.+|.+|||++|+++.|+++...+
T Consensus 241 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 241 -YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 011112346889999999999999999999999999988653
No 31
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=365.00 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=196.4
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 45677899999999999999875 79999999987643 23446788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 90 ~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 90 CPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999974 4569999999999999999999999 9999999999999999999999999999987654433
Q ss_pred cccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.......||+.|+|||++.+..+ +.++||||+||++|+|++|..||...... +..... ..+...
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~~~i-~~~~~~-------- 228 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------ALYKKI-MRGKYD-------- 228 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHH-HHTCCC--------
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH-HcCCCC--------
Confidence 33445568999999999988775 89999999999999999999999743221 111111 112110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.+......+.+++.+||+.||.+|||++|+++.
T Consensus 229 --~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 --VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 111123467899999999999999999999864
No 32
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-41 Score=354.68 Aligned_cols=264 Identities=27% Similarity=0.409 Sum_probs=209.2
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 45778899999999999999876 6899999998543 2334577899999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999974 4579999999999999999999999 99999999999999999999999999999876554
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.........||+.|+|||.+.+..++.++|||||||++|+|++|+.||...... ......+... .... ..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~-~~~~-~~-- 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDS-VPNV-TT-- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSC-CCCH-HH--
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhcc-CCCc-ch--
Confidence 433344456899999999999999999999999999999999999999743221 1111112111 1100 01
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhhhhcC
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEKG 638 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~~~ 638 (679)
......+..+.+++.+||+.||.+|| +++++.+.|+.+......
T Consensus 235 --~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 235 --DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp --HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred --hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 11122345788999999999999999 999999999988765443
No 33
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.4e-42 Score=364.40 Aligned_cols=266 Identities=25% Similarity=0.344 Sum_probs=208.0
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc----eEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lV~ 432 (679)
..|++.+.||+|+||.||+|++. ++.||||++... ........+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 45677899999999999999887 899999998654 333455667999999999999999999987643 479999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CccccCCCCCCccccCCCcEEEee
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSD 502 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~----------~ivH~Dlkp~NIll~~~~~~kL~D 502 (679)
||+++|+|.++++. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 102 e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 102 AFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred ecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999973 459999999999999999999998 7 999999999999999999999999
Q ss_pred ccCccccccCccc-ccccccCCccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchh-------
Q 005750 503 FGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL------- 569 (679)
Q Consensus 503 fgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~-----~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~------- 569 (679)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.......
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2233468999999999976 35667899999999999999999999754332111
Q ss_pred ---hHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 570 ---NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 570 ---~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
....+...... ......+.... ........+.+++.+||+.||++|||++||++.|+++...
T Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 255 QHPSLEDMQEVVVH-KKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SSCCHHHHHHHHTT-SCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhc-ccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111111 11111111110 1224556799999999999999999999999999998765
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.5e-43 Score=363.21 Aligned_cols=267 Identities=28% Similarity=0.448 Sum_probs=209.6
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-----CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc--cc
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EH 426 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~ 426 (679)
+....|++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 34456778899999999999999842 589999999987766677889999999999999999999998854 34
Q ss_pred eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 506 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla 506 (679)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 689999999999999999753 3458999999999999999999999 99999999999999999999999999999
Q ss_pred cccccCcc--cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCccccc---------chhhHHHHH
Q 005750 507 RQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWA 575 (679)
Q Consensus 507 ~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~---------~~~~~~~~~ 575 (679)
........ .......++..|+|||.+.+..++.++||||||+++|+|++|..|+...... .........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 87654322 1222334677899999999889999999999999999999999998732211 001111111
Q ss_pred HHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 576 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 576 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
...+..+.. ...+...+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 242 ~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 242 IELLKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 222222111 11122334578999999999999999999999999999875
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-41 Score=359.13 Aligned_cols=246 Identities=25% Similarity=0.409 Sum_probs=204.1
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 4667899999999999999984 7999999998654 234556788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 96 ASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999974 4569999999999999999999999 999999999999999999999999999998764432
Q ss_pred cccccccCCccccCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s-~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
......||+.|+|||++.+..+. .++||||+||++|+|++|+.||.+.+.. +.... +..+...
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~-i~~~~~~-------- 232 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------ELRER-VLRGKYR-------- 232 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH-HHHCCCC--------
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------HHHHH-HHhCCCC--------
Confidence 23345699999999999887764 8999999999999999999999744321 11111 1112110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.+......+.+++.+||+.||.+|||++|+++.
T Consensus 233 --~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 233 --IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp --CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred --CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111123468899999999999999999999863
No 36
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=365.50 Aligned_cols=273 Identities=24% Similarity=0.433 Sum_probs=218.6
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc--------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCcccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYC 422 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~ 422 (679)
++....|.+.+.||+|+||.||+|++. .++.||||++.... ....+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 344557788899999999999999863 24689999997653 34457899999999999 899999999999
Q ss_pred cccceEEEEEEecCCCcHhhhhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCC
Q 005750 423 EEEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 489 (679)
Q Consensus 423 ~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~N 489 (679)
...+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 999999999999999999999975421 2469999999999999999999999 999999999999
Q ss_pred ccccCCCcEEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccc
Q 005750 490 ILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGA 567 (679)
Q Consensus 490 Ill~~~~~~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~ 567 (679)
||++.++.+||+|||++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999987654322 22233457889999999999999999999999999999999 99999743321
Q ss_pred hhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcCCCCccc
Q 005750 568 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 644 (679)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~ 644 (679)
.+.+ .+..+.... .+......+.+++.+||+.||++|||++||++.|+++.......+....
T Consensus 301 --~~~~----~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 301 --ELFK----LLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp --HHHH----HHHTTCCCC---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred --HHHH----HHHcCCCCC---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1222 222221111 1112234788999999999999999999999999999987665554443
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.8e-41 Score=352.36 Aligned_cols=247 Identities=25% Similarity=0.396 Sum_probs=204.7
Q ss_pred hhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCC
Q 005750 360 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 438 (679)
Q Consensus 360 ~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g 438 (679)
...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 127 (321)
T 2c30_A 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG 127 (321)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCC
Confidence 34568999999999999987 79999999997665666778999999999999999999999999999999999999999
Q ss_pred cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccccc
Q 005750 439 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISS 518 (679)
Q Consensus 439 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~ 518 (679)
+|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......... ..
T Consensus 128 ~L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~ 199 (321)
T 2c30_A 128 ALTDIVS----QVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RK 199 (321)
T ss_dssp BHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BC
T ss_pred CHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc-cc
Confidence 9999986 3469999999999999999999999 99999999999999999999999999999876543322 23
Q ss_pred cccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCH
Q 005750 519 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 598 (679)
Q Consensus 519 ~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 598 (679)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..... +....... + ....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~~~----~~~~~~~~-----~--~~~~ 265 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKR----LRDSPPPK-----L--KNSH 265 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSSCCC-----C--TTGG
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHH----HhcCCCCC-----c--Cccc
Confidence 446899999999999999999999999999999999999999743221 11111 11111111 0 0111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 599 ESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 599 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.....+.+++.+||+.||++|||++|+++.
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 223468899999999999999999999873
No 38
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.2e-41 Score=349.90 Aligned_cols=260 Identities=25% Similarity=0.378 Sum_probs=201.6
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHh--ccCCCcccccccccc----cceEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRIL 430 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~~----~~~~~l 430 (679)
..|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4567789999999999999988 5899999998643 34556667777776 789999999998643 456899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCccccCCCCCCccccCCCcEEEee
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSD 502 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 502 (679)
||||+++|+|.++++ ...+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+|
T Consensus 84 v~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECC
T ss_pred ehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEee
Confidence 999999999999996 457999999999999999999999 7 9999999999999999999999999
Q ss_pred ccCccccccCcccc---cccccCCccccCCcccCCC------CCCchhHHHHHHHHHHHHHhC----------CCCCCcc
Q 005750 503 FGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVE 563 (679)
Q Consensus 503 fgla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~------~~s~ksDVwSlGvll~elltG----------~~pf~~~ 563 (679)
||++.......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654433221 2234689999999999876 455799999999999999999 8888633
Q ss_pred cccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005750 564 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 632 (679)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 632 (679)
.... ..................... ..........+.+++.+||+.||.+|||++||++.|+++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPND-PSFEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSS-CCHHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC-cchhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2221 111111111111111111100 112234667899999999999999999999999999875
No 39
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=349.26 Aligned_cols=273 Identities=21% Similarity=0.308 Sum_probs=214.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccc--eEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lV~E 433 (679)
.|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4667899999999999999887 58999999997543 234567889999999999999999999987654 7899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc----cCCCcEEEeeccCcccc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 509 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfgla~~~ 509 (679)
|+++++|.+++........+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++...
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999999865545559999999999999999999999 999999999999999 78888999999999876
Q ss_pred ccCcccccccccCCccccCCcccC--------CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccc-hhhHHHHHHHhHh
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA-ELNIVHWARSMIK 580 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~--------~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~-~~~~~~~~~~~~~ 580 (679)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......+.....
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 54432 22345899999999875 5788999999999999999999999997433321 1122211111111
Q ss_pred cCCeeeee---------cc--cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 581 KGDVISIV---------DP--VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 581 ~~~~~~~~---------d~--~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
........ .+ .............+.+++.+||+.||++|||++|+++...+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 11111110 00 111234567777899999999999999999999999998876654
No 40
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.5e-41 Score=349.21 Aligned_cols=260 Identities=24% Similarity=0.389 Sum_probs=200.1
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
....|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34567788999999999999998753 5679999987643 344567999999999999999999999985 45689
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999999743 4568999999999999999999999 99999999999999999999999999999876
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
............+++.|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+ ..+...
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~i----~~~~~~--- 236 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENGERL--- 236 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTTCCC---
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHHH----HcCCCC---
Confidence 5543333333446789999999988899999999999999999997 999997443321 22211 111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+...+..+.+++.+||+.||.+|||+.|+++.|+++...+
T Consensus 237 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111223457889999999999999999999999999988754
No 41
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-41 Score=367.31 Aligned_cols=259 Identities=29% Similarity=0.431 Sum_probs=211.0
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
...+.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 345677899999999999999987 789999999875432 344578899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.++++.. +..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 99999999999742 3468999999999999999999999 999999999999999999999999999998654332
Q ss_pred cccc-ccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 514 THIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 514 ~~~~-~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... ...+ .+..+...
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~------ 334 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---QTRE----FVEKGGRL------ 334 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---HHHH----HHHTTCCC------
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC------
Confidence 2111 12235678999999988889999999999999999998 99999743221 1111 22222111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+...+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 335 ---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 335 ---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11122345788999999999999999999999999998753
No 42
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-41 Score=365.69 Aligned_cols=261 Identities=27% Similarity=0.479 Sum_probs=201.7
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
+....|.+.+.||+|+||.||+|+++ ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 34456777899999999999999875 57789999997643 34557899999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++|+|.++++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999742 4579999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCccccc--ccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 509 AEEDLTHIS--SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 509 ~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
......... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ....+. +..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~---~~~~~~----i~~~~~- 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKA----VDEGYR- 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH---HHHHHH----HHTTEE-
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH----HHcCCC-
Confidence 654322111 12235678999999998899999999999999999998 9999973322 112221 111111
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
...+...+..+.+++.+||+.||.+||+++||++.|+++...
T Consensus 269 --------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 --------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 111223345789999999999999999999999999998764
No 43
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1e-41 Score=376.78 Aligned_cols=260 Identities=24% Similarity=0.421 Sum_probs=212.5
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
+....+++.+.||+|+||.||+|.+++++.||||+++... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3345677889999999999999999989999999997643 34678999999999999999999999987 567899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.++++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 99999999999743 13368889999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
........+++.|+|||++.+..++.++|||||||++|||++ |+.||...+.. ...+.+ ..+...
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i----~~~~~~------- 404 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRAL----ERGYRM------- 404 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHH----HHTCCC-------
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCCC-------
Confidence 222233346788999999988899999999999999999999 99999743221 122211 111110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+...+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 405 --~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 405 --PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 11122345788999999999999999999999999988764
No 44
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.4e-41 Score=355.09 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=203.7
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++++.. ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence 4667899999999999999886 69999999997532 2345678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 86 YANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999873 4578999999999999999999999 999999999999999999999999999998643322
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+ .... +.. .
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~i~~-~~~------~-- 223 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE---LILM-EEI------R-- 223 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------C--
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHHH---HHHc-CCC------C--
Confidence 2 223456899999999999999999999999999999999999999743221 1111 1111 111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 628 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 628 (679)
.+......+.+++.+||+.||.+|| +++||++.
T Consensus 224 --~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 --FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1112234688999999999999999 89999764
No 45
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-41 Score=343.85 Aligned_cols=256 Identities=29% Similarity=0.463 Sum_probs=211.5
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
..|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 35667899999999999999998899999999976533 34678999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
+++|.+++... ...+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++..........
T Consensus 87 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp TCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 99999999753 4568999999999999999999999 999999999999999999999999999998765433222
Q ss_pred cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750 517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 595 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 595 (679)
.....++..|+|||++.+..++.++||||||+++|+|++ |+.||...... ...+ . +..+... .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~---~-i~~~~~~---------~ 225 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE---D-ISTGFRL---------Y 225 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---H-HHTTCCC---------C
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHH---H-HhcCCcC---------C
Confidence 233456788999999988889999999999999999999 89999743221 1111 1 1111110 0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
.+......+.+++.+||+.+|.+|||++|+++.|+++..
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111123468899999999999999999999999999875
No 46
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.7e-41 Score=349.83 Aligned_cols=262 Identities=29% Similarity=0.442 Sum_probs=217.8
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
+....|++.+.||+|+||.||+|.+. +++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34556778899999999999999987 4889999999754 345678999999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp ECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999999754 34569999999999999999999999 99999999999999999999999999999877655
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+... ....
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~----~~~~------- 230 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLE----KDYR------- 230 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHH----TTCC-------
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh----ccCC-------
Confidence 4444444457889999999998899999999999999999999 999997443322 222111 1110
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
...+...+..+.+++.+||+.||.+|||++|+++.|+.+....
T Consensus 231 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 231 --MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111223357889999999999999999999999999987743
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9e-41 Score=350.68 Aligned_cols=261 Identities=21% Similarity=0.284 Sum_probs=200.9
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||+||+|++.+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 34677899999999999999998899999999875422 2346788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
++ |+|.+.+... ...+++..++.++.|++.||+|||+ +||+||||||+|||++.++.+||+|||++........
T Consensus 101 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 101 ME-KDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CS-EEHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CC-CCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 97 4888877642 4569999999999999999999999 9999999999999999999999999999987653322
Q ss_pred cccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee--------
Q 005750 515 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-------- 585 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------- 585 (679)
. .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ..+..........
T Consensus 175 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 S-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL---PKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH---HHHHHHHCCCCTTTSGGGTTS
T ss_pred c-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHCCCChHHhhhhhcc
Confidence 2 223458999999999876 56899999999999999999999999754433221 1111111111000
Q ss_pred --------eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 586 --------SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 586 --------~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
...+.............++.+++.+||+.||.+|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000000001112346889999999999999999999986
No 48
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.9e-41 Score=354.01 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=201.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 87 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence 4667899999999999999887 789999999864432 33466889999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc-c
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T 514 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~-~ 514 (679)
++|+|.+++. ....+++..++.++.|++.||+|||+ +||+||||||+|||++.++.+||+|||++....... .
T Consensus 88 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 88 SGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999997 45679999999999999999999999 999999999999999999999999999998654322 2
Q ss_pred cccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ......+... ... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~----~~~---~----- 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKEK----KTY---L----- 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-SHHHHHHHTT----CTT---S-----
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHHhcc----ccc---C-----
Confidence 22234568999999999987765 78999999999999999999999743332 1122221111 100 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.........+.+++.+||+.||.+|||++|+++.
T Consensus 229 -~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011223467899999999999999999999864
No 49
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.2e-41 Score=377.95 Aligned_cols=260 Identities=29% Similarity=0.447 Sum_probs=215.5
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcC-CcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
+....+++.+.||+|+||.||+|.++. ++.||||+++... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 344567788999999999999999874 8899999997643 34678999999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 296 E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 296 EFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp ECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999999754 34568999999999999999999999 99999999999999999999999999999876544
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.........+++.|+|||++.+..++.++|||||||++|||++ |..||...+... ..+.+ ..+.
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~-------- 436 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELL----EKDY-------- 436 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH----HTTC--------
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HcCC--------
Confidence 3333333446789999999998899999999999999999999 999997443322 22221 1111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
....+...+..+.+++.+||+.||.+|||++||++.|+.+..
T Consensus 437 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 437 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 111122334578899999999999999999999999998764
No 50
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.9e-40 Score=353.74 Aligned_cols=249 Identities=24% Similarity=0.333 Sum_probs=204.1
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch------hHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4677899999999999999987 6899999999754321 34778999999999999999999999999999999
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC----cEEEeeccCc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGLS 506 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfgla 506 (679)
||||+++|+|.+++. ....+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+||+|||++
T Consensus 93 v~e~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 93 ILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEECCCSCBHHHHHT---TCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999997 35679999999999999999999999 9999999999999998776 7999999999
Q ss_pred cccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.. .... . +..+...
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~~~---~-i~~~~~~- 236 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLA---N-ITAVSYD- 236 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---H-HHTTCCC-
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhcCCC-
Confidence 87654322 23446999999999999999999999999999999999999999743321 1111 1 1111110
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+++..... ....+.+++.+||+.||.+|||++|+++
T Consensus 237 -~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111111 2246889999999999999999999985
No 51
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-40 Score=344.17 Aligned_cols=264 Identities=16% Similarity=0.191 Sum_probs=212.6
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|+++++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 35677899999999999999874 79999999986432 334678899999999 799999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc-----EEEeeccCcccc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQA 509 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kL~Dfgla~~~ 509 (679)
+ +++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||++...
T Consensus 88 ~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 88 L-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp C-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred c-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 9 99999999753 4569999999999999999999999 99999999999999987766 999999999876
Q ss_pred ccCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC
Q 005750 510 EEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 583 (679)
Q Consensus 510 ~~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 583 (679)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..............+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 543321 12345689999999999999999999999999999999999999985443332222222221111111
Q ss_pred eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 584 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 584 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
... +.. ..+..+.+++.+||+.||.+||++++|++.|+++.....
T Consensus 242 ~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 242 LRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 110 111 123478899999999999999999999999999887543
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=363.04 Aligned_cols=266 Identities=27% Similarity=0.454 Sum_probs=213.3
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCccccccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 425 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 425 (679)
++....|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++...
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 444566788999999999999999853 46789999997543 34556789999999999999999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC---cE
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RA 498 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~ 498 (679)
...++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997543 23468999999999999999999999 9999999999999999554 59
Q ss_pred EEeeccCccccccCc-ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHH
Q 005750 499 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 576 (679)
Q Consensus 499 kL~Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 576 (679)
||+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ...+.
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~~-- 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEF-- 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH--
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH--
Confidence 999999997643221 122233457899999999988899999999999999999998 99999743221 12221
Q ss_pred HhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 577 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 577 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+..+... ..+......+.+++.+||+.+|.+|||++||++.|+.+.....
T Consensus 299 --i~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 299 --VTSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp --HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --HHcCCCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 1122111 1112223468899999999999999999999999999887543
No 53
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.5e-42 Score=356.17 Aligned_cols=267 Identities=24% Similarity=0.390 Sum_probs=209.5
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEE-----cCCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCccccccccccc-
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE- 425 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~- 425 (679)
.+....|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 34445577889999999999999984 368999999997543 23457789999999999999999999999776
Q ss_pred -ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeecc
Q 005750 426 -HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 504 (679)
Q Consensus 426 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 504 (679)
+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccc
Confidence 6789999999999999999643 4569999999999999999999999 999999999999999999999999999
Q ss_pred CccccccCcc--cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccc--------cchhhHHHH
Q 005750 505 LSRQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--------GAELNIVHW 574 (679)
Q Consensus 505 la~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~--------~~~~~~~~~ 574 (679)
++........ .......+|..|+|||.+.+..++.++|||||||++|+|++|..|+..... .........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9987654432 223344578889999999988999999999999999999999998752210 001111111
Q ss_pred HHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005750 575 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 633 (679)
Q Consensus 575 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 633 (679)
....+..+.. ...+......+.+++.+||+.||.+|||++|+++.|++++
T Consensus 252 ~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKR---------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCC---------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1122222111 1112233457889999999999999999999999999875
No 54
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-40 Score=357.04 Aligned_cols=255 Identities=23% Similarity=0.308 Sum_probs=207.3
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
......|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344567888999999999999999886 68999999997542 344567899999999999999999999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC---CcEEEeeccCc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 506 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfgla 506 (679)
+||||+++|+|.+++. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHT---TCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999999987 35678999999999999999999999 999999999999999864 45999999999
Q ss_pred cccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .+.. .+..+...
T Consensus 179 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~----~i~~~~~~- 248 (362)
T 2bdw_A 179 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYA----QIKAGAYD- 248 (362)
T ss_dssp BCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCC-
T ss_pred eEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHhCCCC-
Confidence 87654322 23346899999999999999999999999999999999999999743321 1111 11122111
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
... .........+.+++.+||+.||.+|||+.|+++.
T Consensus 249 ~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCT-----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0011223468899999999999999999998753
No 55
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-40 Score=349.86 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=213.0
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
....|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3455777899999999999999862 35889999997643 3455789999999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCC
Q 005750 428 RILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVK 486 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlk 486 (679)
.++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ ++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 9999999999999999975432 2348999999999999999999999 999999999
Q ss_pred CCCccccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCccc
Q 005750 487 SSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVED 564 (679)
Q Consensus 487 p~NIll~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~ 564 (679)
|+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876443222 1223346788999999988889999999999999999999 999997443
Q ss_pred ccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 565 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
... .... +..+... ..+......+.+++.+||+.||.+|||++|+++.|+++...
T Consensus 258 ~~~---~~~~----~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PER---LFNL----LKTGHRM---------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGG---HHHH----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH---HHHH----hhcCCcC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 322 2221 1121111 11122335788999999999999999999999999998763
No 56
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=351.32 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=205.1
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc------hhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
...|.+.+.||+|+||.||+|..+ +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456888999999999999999986 689999999865432 1357799999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC----cEEEeecc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 504 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg 504 (679)
++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+ ++|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999973 5679999999999999999999999 9999999999999998877 89999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+ . ....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~---~-~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANV---S-AVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHH---H-HTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHH---H-hcCC
Confidence 9987653322 233458999999999999999999999999999999999999997432211 11111 1 1110
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
. . ...... .....+.+++.+||+.||.+|||++|+++
T Consensus 235 ~-~-~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 E-F-EDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-C-CHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C-c-Cccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0 000001 12346889999999999999999999987
No 57
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-40 Score=350.55 Aligned_cols=260 Identities=19% Similarity=0.228 Sum_probs=209.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.|++.+.||+|+||.||+|... +++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 4567899999999999999874 789999999865422 34688999999999 9999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc-----EEEeeccCccccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 510 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kL~Dfgla~~~~ 510 (679)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||++....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999999753 4679999999999999999999999 99999999999999998887 9999999998764
Q ss_pred cCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 511 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 511 ~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 43221 123456899999999999999999999999999999999999999854433322222222111111000
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+.. ..+ .+.+++.+||+.+|.+||++++|++.|+++...
T Consensus 242 -----~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 242 -----EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -----HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 112 788999999999999999999999999988764
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-41 Score=354.89 Aligned_cols=262 Identities=26% Similarity=0.445 Sum_probs=211.4
Q ss_pred HHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
...|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 345677899999999999999875 34899999997653 33457799999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCC
Q 005750 429 ILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS 487 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp 487 (679)
++||||+++|+|.+++..... ...+++..++.++.||++||+|||+ ++|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCc
Confidence 999999999999999975321 2579999999999999999999999 9999999999
Q ss_pred CCccccCCCcEEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccc
Q 005750 488 SNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF 565 (679)
Q Consensus 488 ~NIll~~~~~~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~ 565 (679)
+||+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999976543321 22233457889999999988889999999999999999999 9999974322
Q ss_pred cchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 566 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
. .... .+..+.... .+...+..+.+++.+||+.||.+|||+.||++.|+++....
T Consensus 283 ~---~~~~----~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 E---EVIY----YVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H---HHHH----HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred H---HHHH----HHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1 1111 222222211 11123347889999999999999999999999999987643
No 59
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.3e-40 Score=341.72 Aligned_cols=250 Identities=31% Similarity=0.435 Sum_probs=194.1
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc----hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS----HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 34667899999999999999986 89999999875432 23467889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---ccccCCCCCCccccC--------CCcEEEe
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVS 501 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~---ivH~Dlkp~NIll~~--------~~~~kL~ 501 (679)
||+++++|.+++. ...+++..++.++.|++.||+|||+ ++ |+||||||+||+++. ++.+||+
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 9999999999986 4579999999999999999999999 77 999999999999986 7789999
Q ss_pred eccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 502 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 502 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
|||++........ ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+... . .......
T Consensus 159 Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~---~~~~~~~ 229 (271)
T 3dtc_A 159 DFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---V---AYGVAMN 229 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---H---HHHHHTS
T ss_pred cCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHhhhcC
Confidence 9999986544322 23458999999999998899999999999999999999999997432211 1 1111111
Q ss_pred CCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005750 582 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 632 (679)
Q Consensus 582 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 632 (679)
.. ....+......+.+++.+||+.||.+|||++|+++.|+++
T Consensus 230 -~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -KL--------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CC--------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 1111222345788999999999999999999999999864
No 60
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.5e-41 Score=372.25 Aligned_cols=260 Identities=27% Similarity=0.428 Sum_probs=207.0
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
....+++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 344567889999999999999999988899999997643 335679999999999999999999999876 678999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999743 23568999999999999999999999 9999999999999999999999999999987654332
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.... ...+ .+..+..
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~--------- 399 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYR--------- 399 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCC---------
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCC---------
Confidence 22333446789999999988899999999999999999999 99999743221 1111 1122211
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
...+...+..+.+++.+||+.||++|||+++|++.|+++....
T Consensus 400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 0112233457889999999999999999999999999887643
No 61
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=347.02 Aligned_cols=261 Identities=28% Similarity=0.492 Sum_probs=203.4
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
..|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 34667899999999999999886 789999998643 345788999999999999999999999874 3789999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc-EEEeeccCccccccCccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kL~Dfgla~~~~~~~~~ 515 (679)
+|+|.+++........+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++.......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 9999999986443345789999999999999999999844468999999999999998886 7999999997654322
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 595 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 595 (679)
....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... ...... . ...+.... ...
T Consensus 161 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~---~-~~~~~~~~-----~~~- 227 (307)
T 2eva_A 161 --TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-AFRIMW---A-VHNGTRPP-----LIK- 227 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-HHHHHH---H-HHTTCCCC-----CBT-
T ss_pred --ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-HHHHHH---H-HhcCCCCC-----ccc-
Confidence 2235899999999999999999999999999999999999999733221 111111 1 11111111 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcCCC
Q 005750 596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGD 640 (679)
Q Consensus 596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 640 (679)
..+..+.+++.+||+.||.+|||++|+++.|+.+...-...+
T Consensus 228 ---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 228 ---NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred ---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 223468899999999999999999999999999887544433
No 62
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.3e-41 Score=345.65 Aligned_cols=259 Identities=25% Similarity=0.429 Sum_probs=211.6
Q ss_pred HHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
...|++.+.||+|+||.||+|..++++.||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 35677889999999999999999888899999987543 345778999999999999999999999874 4589999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 999999999742 12368999999999999999999999 99999999999999999999999999999876554333
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... ...+. +..+.. .
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~----~~~~~~-----~---- 229 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQN----LERGYR-----M---- 229 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHH----HHTTCC-----C----
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHHH----HhcccC-----C----
Confidence 3334456789999999988889999999999999999999 99999743221 11111 111111 0
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+......+.+++.+||+.+|++|||++++++.|+++....
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 111122347889999999999999999999999999987753
No 63
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-40 Score=350.43 Aligned_cols=263 Identities=26% Similarity=0.425 Sum_probs=197.5
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCC----cEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
....|++.+.||+|+||.||+|.+... ..||||++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 345677889999999999999987643 27999999754 344567899999999999999999999999776655
Q ss_pred ------EEEEEecCCCcHhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEE
Q 005750 429 ------ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 499 (679)
Q Consensus 429 ------~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 499 (679)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986532 22368999999999999999999999 9999999999999999999999
Q ss_pred EeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 005750 500 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 500 L~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 577 (679)
|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||....... .....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~-- 252 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYNYL-- 252 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH--
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHHHH--
Confidence 999999987544322 12223346788999999999899999999999999999999 999997443322 11111
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
. .+... .........+.+++.+||+.||.+|||++|+++.|+++..-.
T Consensus 253 -~-~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 253 -I-GGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -H-TTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -h-cCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 11110 111223357889999999999999999999999999998853
No 64
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.2e-41 Score=357.67 Aligned_cols=263 Identities=27% Similarity=0.429 Sum_probs=210.1
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
....|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455777899999999999999742 468999999976433 3457799999999999 7999999999987754
Q ss_pred -eEEEEEEecCCCcHhhhhcccCC--------------------------------------------------------
Q 005750 427 -QRILVYEYMHNGTLRDRLHGSVN-------------------------------------------------------- 449 (679)
Q Consensus 427 -~~~lV~E~~~~gsL~~~l~~~~~-------------------------------------------------------- 449 (679)
..++||||+++|+|.+++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999975421
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc-ccccccc
Q 005750 450 -------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVAR 521 (679)
Q Consensus 450 -------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~-~~~~~~~ 521 (679)
...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++........ .......
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 1228999999999999999999999 9999999999999999999999999999987543322 2233445
Q ss_pred CCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHH
Q 005750 522 GTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIES 600 (679)
Q Consensus 522 gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 600 (679)
||+.|+|||++.+..++.++|||||||++|+|++ |+.||....... .... .+..+.... .+...
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~----~~~~~~~~~---------~~~~~ 321 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCR----RLKEGTRMR---------APDYT 321 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHH----HHHHTCCCC---------CCTTC
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHH----HHHcCCCCC---------CCCCC
Confidence 7889999999998899999999999999999998 999997443321 1111 122221111 11122
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 601 IWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 601 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
...+.+++.+||+.||.+|||++||++.|++++..
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999998864
No 65
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.6e-40 Score=339.95 Aligned_cols=253 Identities=31% Similarity=0.524 Sum_probs=203.1
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchh-------HHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
...|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 355777899999999999999885 78999999986532211 167899999999999999999999997765
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCccccCCCc-----EEE
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AKV 500 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kL 500 (679)
++||||+++|+|.+.+.. ....+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 699999999999998864 34579999999999999999999998 88 999999999999988776 999
Q ss_pred eeccCccccccCcccccccccCCccccCCccc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 005750 501 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 578 (679)
Q Consensus 501 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l--~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 578 (679)
+|||++...... .....|++.|+|||++ ....++.++|||||||++|+|++|+.||........ ..... .
T Consensus 171 ~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~---~ 242 (287)
T 4f0f_A 171 ADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINM---I 242 (287)
T ss_dssp CCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHH---H
T ss_pred CCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHH---H
Confidence 999999754432 2334689999999998 455678999999999999999999999974433221 11111 1
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 632 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 632 (679)
...+.. + ..+......+.+++.+||+.||.+|||++|+++.|+++
T Consensus 243 ~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEGLR-----P----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSCCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccCCC-----C----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111 1 11222345788999999999999999999999999864
No 66
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=363.01 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=205.2
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
...|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456888999999999999999875 68999999987543 234567899999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc---CCCcEEEeeccCcccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 509 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfgla~~~ 509 (679)
||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ +||+||||||+|||++ .++.+||+|||++...
T Consensus 90 E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999874 4679999999999999999999999 9999999999999998 5688999999999876
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...+.. .... .+..+... ...
T Consensus 164 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~~----~i~~~~~~-~~~ 234 (444)
T 3soa_A 164 EGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLYQ----QIKAGAYD-FPS 234 (444)
T ss_dssp CTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHTCCC-CCT
T ss_pred cCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHHH----HHHhCCCC-CCc
Confidence 543322 23356999999999999999999999999999999999999999743321 1111 12222111 001
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+ ........+.+++.+||+.||.+|||+.|+++.
T Consensus 235 ~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 P-----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp T-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred c-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 111223468899999999999999999999873
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.2e-40 Score=347.13 Aligned_cols=264 Identities=31% Similarity=0.506 Sum_probs=205.5
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
++....|.+.++||+|+||.||+|.+. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 445566788899999999999999865 35899988753 23455789999999999999999999998764 45789
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999743 5679999999999999999999999 999999999999999999999999999998654
Q ss_pred cC-cccccccccCCccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 511 ED-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 511 ~~-~~~~~~~~~gt~~y~aPE~l~---~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
.. .........||+.|+|||++. +..++.++|||||||++|+|++|+.||....... .....+ ..+...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~~~----~~~~~~- 256 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMV----GRGYAS- 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHH----HHTCCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHHHH----hcCCCC-
Confidence 31 122223446899999999985 6678999999999999999999999997433221 111111 111111
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
+.+ .......+..+.+++.+||+.+|++||++.||++.|+.+...
T Consensus 257 ---~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 257 ---PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp ---CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred ---cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 110 111122345788999999999999999999999999988764
No 68
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.1e-41 Score=353.14 Aligned_cols=260 Identities=23% Similarity=0.410 Sum_probs=203.9
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCc----EEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
+....|++.+.||+|+||+||+|++. +++ +||+|.+.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 34456778899999999999999865 344 46888876432 344578999999999999999999999998765
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++|+||+.+|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCccee
Confidence 78999999999999999753 4679999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 508 QAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 508 ~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +... +..+...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~ 238 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERL 238 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHH----HHcCCCC
Confidence 76443222 1223346889999999999999999999999999999999 999997443322 2221 1111110
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+......+.+++.+||+.+|.+||+++|+++.|+.+...
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 11122334788999999999999999999999999988763
No 69
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.9e-41 Score=358.17 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=212.2
Q ss_pred HHHHhhccccCcCccEEEEEEEE-----cCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCccccccccc--ccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~~ 428 (679)
...|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 45677889999999999999984 368899999998776667788999999999999999999999875 45678
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999999753 3468999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccc--------hhhHHHHHHHh
Q 005750 509 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSM 578 (679)
Q Consensus 509 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~--------~~~~~~~~~~~ 578 (679)
....... ......+++.|+|||++.+..++.++|||||||++|+|++|+.||....... ...........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6543321 2233457888999999998889999999999999999999999986322110 00001111111
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
...+. ....+......+.+++.+||+.||.+|||++|+++.|+.+.....
T Consensus 257 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 LEEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hhccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11111 111223334578999999999999999999999999999877544
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-40 Score=358.52 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=199.1
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV 431 (679)
..|++.+.||+|+||.||+|+.+ +++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 34677899999999999999987 58899999997542 22335678899999887 899999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 132 ~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999974 4579999999999999999999999 9999999999999999999999999999986332
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccc--hhhHHHHHHHhHhcCCeeeeec
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 589 (679)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.....+.....
T Consensus 206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----- 279 (396)
T 4dc2_A 206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----- 279 (396)
T ss_dssp TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-----
T ss_pred CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-----
Confidence 22 22344569999999999999999999999999999999999999996432221 11111222222222211
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 622 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 622 (679)
..+......+.+++.+||+.||.+||++
T Consensus 280 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 -----RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111223468899999999999999996
No 71
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=344.74 Aligned_cols=247 Identities=27% Similarity=0.390 Sum_probs=194.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--------------------------hhHHHHHHHHHHHHhc
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRI 410 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l 410 (679)
.|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 4677899999999999999876 689999999865421 1135688999999999
Q ss_pred cCCCcccccccccc--cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCC
Q 005750 411 HHRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 488 (679)
Q Consensus 411 ~hpnIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~ 488 (679)
+||||+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.|++.||+|||+ ++|+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 99999999999876 568899999999999988654 4579999999999999999999999 99999999999
Q ss_pred CccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCcccc
Q 005750 489 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDF 565 (679)
Q Consensus 489 NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~s~ksDVwSlGvll~elltG~~pf~~~~~ 565 (679)
||+++.++.+||+|||++......... .....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876543222 23346899999999997764 47899999999999999999999974322
Q ss_pred cchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 566 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
. ... . .+....... + ........+.+++.+||+.||.+|||++|+++
T Consensus 246 ~---~~~---~-~~~~~~~~~---~-----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M---CLH---S-KIKSQALEF---P-----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H---HHH---H-HHHHCCCCC---C-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H---HHH---H-HHhcccCCC---C-----CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111 1 111111110 0 01112346889999999999999999999875
No 72
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=351.48 Aligned_cols=250 Identities=19% Similarity=0.306 Sum_probs=204.3
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|.+.+.||+|+||.||+|... +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4667899999999999999887 5889999998754 3445678899999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC--CCcEEEeeccCccccccCcc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfgla~~~~~~~~ 514 (679)
+|+|.+++.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++........
T Consensus 85 g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 85 GLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999974 23569999999999999999999999 99999999999999987 78999999999987654322
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...... ... ..... +... .++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~---~~i~~-~~~~--~~~~~~~ 228 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QII---ENIMN-AEYT--FDEEAFK 228 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHH---HHHHH-TCCC--CCHHHHT
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHH---HHHHc-CCCC--CChhhhc
Confidence 23345899999999999988999999999999999999999999743221 111 11111 1110 0000001
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.....+.+++.+||+.||.+|||+.|+++.
T Consensus 229 ----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 ----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123468899999999999999999999873
No 73
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-40 Score=347.60 Aligned_cols=263 Identities=29% Similarity=0.429 Sum_probs=213.5
Q ss_pred HHHHHhhccccCcCccEEEEEEEE------cCCcEEEEEEecCCcc-hhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
....|.+.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 345677889999999999999985 2478999999976533 3457899999999999 8999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 491 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIl 491 (679)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ ++|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 99999999999999999975421 2258999999999999999999999 99999999999999
Q ss_pred ccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchh
Q 005750 492 LDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 569 (679)
Q Consensus 492 l~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~ 569 (679)
++.++.+||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--
Confidence 999999999999999876544322 2223446789999999988899999999999999999999 999997433221
Q ss_pred hHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 570 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
...... ..+.. . ..+......+.+++.+||+.||.+|||++|+++.|+++...
T Consensus 256 ~~~~~~----~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 256 KFYKMI----KEGFR-----M----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHH----HHTCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHh----ccCCC-----C----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111111 11111 0 11112234788999999999999999999999999998874
No 74
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-40 Score=364.42 Aligned_cols=252 Identities=29% Similarity=0.488 Sum_probs=207.1
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc-eEEEEEEec
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEYM 435 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-~~~lV~E~~ 435 (679)
..+++.+.||+|+||.||+|.++ ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 45667899999999999999986 7899999997643 4578999999999999999999999976654 789999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp TTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999854 23457999999999999999999999 999999999999999999999999999998643321
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..+...
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~----i~~~~~~--------- 405 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPR----VEKGYKM--------- 405 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHH----HHTTCCC---------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCC---------
Confidence 12246889999999999999999999999999999998 999997443322 2221 1222111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11223345788999999999999999999999999998764
No 75
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.7e-41 Score=353.90 Aligned_cols=262 Identities=24% Similarity=0.388 Sum_probs=209.1
Q ss_pred hhccccCcCccEEEEEEEEc-----CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccc--cceEEEE
Q 005750 360 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILV 431 (679)
Q Consensus 360 ~~~~~LG~G~~g~Vy~a~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lV 431 (679)
++.+.||+|+||.||++.++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 77899999999999998653 58899999998653 3446779999999999999999999999976 4678999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999973 348999999999999999999999 9999999999999999999999999999987654
Q ss_pred Ccc--cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccc--------hhhHHHHHHHhHhc
Q 005750 512 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSMIKK 581 (679)
Q Consensus 512 ~~~--~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~--------~~~~~~~~~~~~~~ 581 (679)
... .......++..|+|||++.+..++.++|||||||++|+|++|+.||....... ...........+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 332 12233457888999999998889999999999999999999999997322110 00011111122222
Q ss_pred CCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 582 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 582 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+. ....+......+.+++.+||+.||.+|||++|+++.|+++...-.
T Consensus 267 ~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 267 GE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 11 111222334578999999999999999999999999999877543
No 76
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-40 Score=355.73 Aligned_cols=256 Identities=23% Similarity=0.309 Sum_probs=205.5
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-----chhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
+....|++.+.||+|+||.||+|..+ +++.||||++.... ....+.+.+|+++++.++||||+++++++.+++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34567889999999999999999876 68999999985321 1235778999999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc---EEEeec
Q 005750 428 RILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDF 503 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Df 503 (679)
.++||||+++|+|.+.+.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++. +||+||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 999999999999988876432 34568999999999999999999999 99999999999999986554 999999
Q ss_pred cCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC
Q 005750 504 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 583 (679)
Q Consensus 504 gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 583 (679)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..... . +..+.
T Consensus 178 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~---~-i~~~~ 248 (351)
T 3c0i_A 178 GVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFE---G-IIKGK 248 (351)
T ss_dssp TTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHH---H-HHHTC
T ss_pred cceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHH---H-HHcCC
Confidence 99987654322 2234468999999999999999999999999999999999999997421 11111 1 11111
Q ss_pred eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 584 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 584 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ..+..... ....+.+++.+||+.||.+|||+.|+++
T Consensus 249 ~~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YK--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CC--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 00000111 2346889999999999999999999986
No 77
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.5e-40 Score=341.61 Aligned_cols=259 Identities=28% Similarity=0.448 Sum_probs=206.8
Q ss_pred HHHhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
..|.+.+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.++ ..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEE
Confidence 456778999999999999998653 3469999987653 34567899999999999999999999998754 56899
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 91 MELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999999753 4568999999999999999999999 9999999999999999999999999999987655
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
..........+++.|+|||.+.+..++.++||||||+++|+|++ |+.||....... ....+ ..+....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~----~~~~~~~---- 234 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVL----EKGDRLP---- 234 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHH----HHTCCCC----
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHH----hcCCCCC----
Confidence 43333344457889999999988899999999999999999998 999997433322 22211 1111110
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.+......+.+++.+||+.||.+|||+.|+++.|+++...+.
T Consensus 235 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 235 -----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 111123468899999999999999999999999999987654
No 78
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-40 Score=343.55 Aligned_cols=259 Identities=19% Similarity=0.289 Sum_probs=198.5
Q ss_pred HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
|++.+.||+|+||.||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 567889999999999999998899999999865432 234678899999999999999999999999999999999997
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 516 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~ 516 (679)
+ +|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 999888742 4678999999999999999999999 99999999999999999999999999999765432221
Q ss_pred cccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe---e-----ee
Q 005750 517 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV---I-----SI 587 (679)
Q Consensus 517 ~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~ 587 (679)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .+.. +......... . ..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD--QLMR-IFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH-HHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-HHHHHCCCChhhchhhhcccc
Confidence 223358999999999876 468999999999999999999999997433221 1111 1111111000 0 00
Q ss_pred eccccc-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 588 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 588 ~d~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.++... ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011000 0011123456889999999999999999999976
No 79
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=356.91 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=199.7
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~ 428 (679)
+....|++.+.||+|+||.||+|+.+ +|+.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34455778899999999999999886 58999999997532 23446688899999988 799999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999974 4579999999999999999999999 9999999999999999999999999999986
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .. ...... +..
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~---~~~i~~-~~~---- 241 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DL---FEAILN-DEV---- 241 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHHH-CCC----
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HH---HHHHHc-CCC----
Confidence 43322 2233456999999999999888999999999999999999999999743321 11 111111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 627 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~ 627 (679)
.++......+.+++.+||+.||.+||++ +|+++
T Consensus 242 ------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 ------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111223468899999999999999998 67765
No 80
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-40 Score=345.18 Aligned_cols=257 Identities=22% Similarity=0.390 Sum_probs=205.0
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcC-C-------cEEEEEEecCCcchhHHHHHHHHHHHHhccCCCccccccccccc
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 425 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 425 (679)
+....|.+.+.||+|+||.||+|.+.. + +.||+|++........+.+.+|++++++++||||+++++++.+.
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 344567788999999999999998663 3 57999999776666678899999999999999999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc--------
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-------- 497 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------- 497 (679)
+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccce
Confidence 9999999999999999999753 3448999999999999999999999 99999999999999998887
Q ss_pred EEEeeccCccccccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH
Q 005750 498 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR 576 (679)
Q Consensus 498 ~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~ 576 (679)
+||+|||++...... ....+++.|+|||++.+ ..++.++|||||||++|+|++|..|+...... .......
T Consensus 160 ~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~~~- 231 (289)
T 4fvq_A 160 IKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQFY- 231 (289)
T ss_dssp EEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHH-
T ss_pred eeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHHHh-
Confidence 999999998765432 22347889999999987 67899999999999999999965544312211 1111111
Q ss_pred HhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 577 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 577 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
......... ....+.+++.+||+.||.+|||++|+++.|+++..-..
T Consensus 232 --~~~~~~~~~------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 232 --EDRHQLPAP------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp --HTTCCCCCC------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred --hccCCCCCC------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 111111111 12257799999999999999999999999998877433
No 81
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.8e-40 Score=350.55 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=180.9
Q ss_pred cccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEEecCCCcH
Q 005750 363 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
+.||+|+||.||+|.++ +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999986 6899999998643 3466788999999997 99999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC---cEEEeeccCccccccCccccc
Q 005750 441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 517 (679)
Q Consensus 441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfgla~~~~~~~~~~~ 517 (679)
.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||++......... .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999984 5679999999999999999999999 9999999999999997665 8999999999865443222 2
Q ss_pred ccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch-hhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750 518 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVLIGNV 596 (679)
Q Consensus 518 ~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 596 (679)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.... ....+ ....+..+.... .. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~~~~~~--~~----~~ 239 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDFSF--EG----EA 239 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTTTCCCC--CS----HH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHcCCCCC--Cc----cc
Confidence 334579999999999999999999999999999999999999974433211 11122 222222222110 00 00
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.......+.+++.+||+.||.+|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0122347889999999999999999999874
No 82
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4e-40 Score=347.79 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=199.1
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccc--------
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 426 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-------- 426 (679)
..|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45777899999999999999987 79999999987533 345678999999999999999999999875432
Q ss_pred -------------------------------------------------eEEEEEEecCCCcHhhhhcccCCCCCCCHHH
Q 005750 427 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 457 (679)
Q Consensus 427 -------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~ 457 (679)
..++||||+++|+|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 3799999999999999998655455667778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc-----------cccccccCCccc
Q 005750 458 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 526 (679)
Q Consensus 458 ~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~-----------~~~~~~~gt~~y 526 (679)
++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........ .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999999 9999999999999999999999999999987654421 112334589999
Q ss_pred cCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHH
Q 005750 527 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 606 (679)
Q Consensus 527 ~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 606 (679)
+|||++.+..++.++|||||||++|+|++|..|+. ....... ......... ........+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVRIIT-DVRNLKFPL---------LFTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHHHHH-HHHTTCCCH---------HHHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHHHHH-HhhccCCCc---------ccccCChhHHH
Confidence 99999999999999999999999999999977753 1111111 111111110 11223346789
Q ss_pred HHHHhcccCCCCCCCHHHHHH
Q 005750 607 VAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 607 li~~cl~~dP~~RPt~~evl~ 627 (679)
++.+||+.||.+|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 83
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=353.55 Aligned_cols=266 Identities=26% Similarity=0.411 Sum_probs=209.9
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCccccccccccc
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 425 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~ 425 (679)
+....|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 34456778899999999999999862 46789999997542 33457899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCC
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVN--------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDV 485 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dl 485 (679)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ +||+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence 999999999999999999975421 1348999999999999999999999 99999999
Q ss_pred CCCCccccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcc
Q 005750 486 KSSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVE 563 (679)
Q Consensus 486 kp~NIll~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~ 563 (679)
||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|+|+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876543321 2233457889999999988899999999999999999998 99999744
Q ss_pred cccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 564 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.... .... .+..+.. ...+......+.+++.+||+.||.+|||+.|+++.|+.+.....
T Consensus 279 ~~~~--~~~~----~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 279 PVDA--NFYK----LIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCSH--HHHH----HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CcHH--HHHH----HHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 3221 1112 1222111 01112224578899999999999999999999999999877533
No 84
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.1e-40 Score=349.04 Aligned_cols=265 Identities=24% Similarity=0.447 Sum_probs=213.0
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc--------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCcccccccccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE 424 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 424 (679)
....|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3456778899999999999999863 46789999997653 34557789999999999 89999999999999
Q ss_pred cceEEEEEEecCCCcHhhhhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcc
Q 005750 425 EHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 491 (679)
Q Consensus 425 ~~~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIl 491 (679)
.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 9999999999999999999985431 2358999999999999999999999 99999999999999
Q ss_pred ccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchh
Q 005750 492 LDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 569 (679)
Q Consensus 492 l~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~ 569 (679)
++.++.+||+|||++......... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||......
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--- 266 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 266 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---
Confidence 999999999999999876543221 1223346789999999988889999999999999999999 99999743221
Q ss_pred hHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcC
Q 005750 570 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 638 (679)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 638 (679)
.+... +..+... ..+......+.+++.+||+.+|.+|||++|+++.|+++......
T Consensus 267 ~~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 ELFKL----LKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHH----HHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHH----HhcCCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 11111 1122111 11122334688999999999999999999999999999886554
No 85
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-40 Score=354.62 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=206.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4777899999999999999886 689999999987666666789999999999999999999999999999999999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC--CCcEEEeeccCccccccCcc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfgla~~~~~~~~ 514 (679)
+|+|.+++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||++........
T Consensus 132 gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999874 24579999999999999999999999 99999999999999974 57899999999987654322
Q ss_pred cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .... .... .... .++..
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~---~i~~-~~~~--~~~~~-- 273 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQ---NVKR-CDWE--FDEDA-- 273 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---HHHH-CCCC--CCSST--
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHH---HHHh-CCCC--CCccc--
Confidence 22345899999999999999999999999999999999999999743221 1111 1111 1110 11111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.......+.+++.+||+.||.+|||++|+++.
T Consensus 274 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 --FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11223468899999999999999999999863
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.8e-40 Score=340.97 Aligned_cols=261 Identities=21% Similarity=0.290 Sum_probs=199.7
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 3567899999999999999886 68999999997543 33457788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++ ++.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 83 CDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred CCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 975 55555543 35679999999999999999999999 9999999999999999999999999999987653322
Q ss_pred cccccccCCccccCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee---ee---
Q 005750 515 HISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI---SI--- 587 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~-~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 587 (679)
. .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... .. .....+.......... ..
T Consensus 157 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-~~-~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 C-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VD-DQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp C-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HH-HHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred c-ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-HH-HHHHHHHHHhCCCChhhhhhhccc
Confidence 2 23345899999999987765 79999999999999999998888642221 11 1222221111110000 00
Q ss_pred ec---------ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 588 VD---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 588 ~d---------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+ ..............+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00001111233457889999999999999999999986
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-40 Score=349.49 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=199.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
.|++.+.||+|+||.||+|+.+ +++.||+|++.+.. ....+.+.+|..+++++ +||||+++++++.+.+..++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 4677899999999999999987 58999999997542 33456788999999988 8999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 90 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999974 4579999999999999999999999 99999999999999999999999999999864322
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch--hhHHHHHHHhHhcCCeeeeecc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........+.....
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 21 23345699999999999999999999999999999999999999974222110 0111122222222211
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 622 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 622 (679)
. .+......+.+++.+||+.||.+||++
T Consensus 237 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 R----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred C----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 111223468899999999999999996
No 88
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4e-40 Score=337.44 Aligned_cols=252 Identities=21% Similarity=0.368 Sum_probs=204.5
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCccccccccccc--ceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|+++ ++.||+|++.... ....+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45677899999999999999986 8999999997543 34456799999999999999999999999876 7889999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999853 23468999999999999999999998 88 9999999999999999999999998876533
Q ss_pred cCcccccccccCCccccCCcccCCCCCC---chhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLT---EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s---~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
.. ...||+.|+|||.+.+...+ .++|||||||++|+|++|+.||...... +........+..
T Consensus 165 ~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~--- 229 (271)
T 3kmu_A 165 SP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVALEGLR--- 229 (271)
T ss_dssp CT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHHHSCCC---
T ss_pred cc------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHHhcCCC---
Confidence 22 23578999999999876544 4899999999999999999999733221 111112222111
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
+ ..+......+.+++.+||+.||.+|||++|+++.|+++.+
T Consensus 230 --~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 --P----TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 1112233468899999999999999999999999998754
No 89
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-40 Score=338.71 Aligned_cols=260 Identities=24% Similarity=0.414 Sum_probs=210.6
Q ss_pred HHhhcc-ccCcCccEEEEEEEEc---CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 358 TNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 358 ~~~~~~-~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
.+.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 344445 8999999999999864 57889999998643 34567899999999999999999999999 455689999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++.. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 89 EMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp ECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999874 24569999999999999999999999 99999999999999999999999999999876543
Q ss_pred cccc--cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 513 LTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 513 ~~~~--~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
.... .....+++.|+|||++.+..++.++|||||||++|+|++ |+.||...... ..... +..+...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~----i~~~~~~---- 232 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAF----IEQGKRM---- 232 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHH----HHTTCCC----
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HhcCCcC----
Confidence 3221 223346789999999988889999999999999999998 99999743321 12221 2222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 639 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 639 (679)
..+...+..+.+++.+||+.+|.+||++.|+++.|+++.......
T Consensus 233 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 233 -----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp -----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred -----CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 112233457889999999999999999999999999998865543
No 90
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=353.38 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=203.8
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45778899999999999999876 58899999986432 233467889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+.+|+|.+++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQ---QNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999998 35679999999999999999999999 99999999999999999999999999999876443
Q ss_pred cccccccccCCccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 513 LTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~---~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||................. ...
T Consensus 169 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~----~~~----- 237 (384)
T 4fr4_A 169 T--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET----TVV----- 237 (384)
T ss_dssp C--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH----CCC-----
T ss_pred C--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh----ccc-----
Confidence 2 2234569999999999864 4589999999999999999999999974443332222222111 110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 627 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 627 (679)
.++......+.+++.+||+.||.+||+ +++|++
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111222347889999999999999998 666654
No 91
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-40 Score=345.95 Aligned_cols=243 Identities=22% Similarity=0.354 Sum_probs=202.7
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. ....+.+.+|..+++.++||||+++++++.+.+..++|||
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 4667899999999999999886 69999999997532 1234678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++......
T Consensus 87 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 87 YIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999974 4578999999999999999999999 99999999999999999999999999999875432
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +........ .. .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~-~~------~-- 221 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNA-EL------R-- 221 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHC-CC------C--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhC-CC------C--
Confidence 23456899999999999999999999999999999999999999743221 111122211 11 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 627 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 627 (679)
.+......+.+++.+||+.||.+|| +++|+++
T Consensus 222 --~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 --FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1112234688999999999999999 8888874
No 92
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=347.17 Aligned_cols=261 Identities=21% Similarity=0.273 Sum_probs=194.7
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccc--------c
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYC--------E 423 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~--------~ 423 (679)
+....|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++ .
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 33446778899999999999999976 68999999987666666778999999999996 99999999988 4
Q ss_pred ccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCccccCCCcEEEe
Q 005750 424 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVS 501 (679)
Q Consensus 424 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kL~ 501 (679)
.....++||||+. |+|.+++........+++..++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEe
Confidence 4556899999995 7999988754456679999999999999999999998 88 9999999999999999999999
Q ss_pred eccCccccccCcccc-----------cccccCCccccCCccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccc
Q 005750 502 DFGLSRQAEEDLTHI-----------SSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 567 (679)
Q Consensus 502 Dfgla~~~~~~~~~~-----------~~~~~gt~~y~aPE~l---~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~ 567 (679)
|||++.......... .....|++.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 259 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL- 259 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence 999998765432211 1133489999999998 5677899999999999999999999999732211
Q ss_pred hhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 568 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
..... .. ...........+.+++.+||+.||.+|||++|+++.|+++.....
T Consensus 260 -----~~~~~-----~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 -----RIVNG-----KY--------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ----------------C--------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -----HhhcC-----cc--------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 00000 00 000011112247799999999999999999999999999887543
No 93
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.4e-39 Score=349.31 Aligned_cols=270 Identities=17% Similarity=0.233 Sum_probs=207.3
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcC------CcEEEEEEecCCcchhH-----------HHHHHHHHHHHhccCCCccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHRT-----------QQFVTEVALLSRIHHRNLVP 417 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~hpnIv~ 417 (679)
....|++.+.||+|+||.||+|.+.. ++.||||++........ ..+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34467788999999999999998864 47899999876532111 12344566677778999999
Q ss_pred cccccccc----ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 418 LIGYCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 418 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
+++++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEe
Confidence 99998664 5689999999 9999999975 24679999999999999999999999 9999999999999999
Q ss_pred --CCCcEEEeeccCccccccCcccc------cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccc
Q 005750 494 --INMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 565 (679)
Q Consensus 494 --~~~~~kL~Dfgla~~~~~~~~~~------~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~ 565 (679)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 88999999999998765432211 1234489999999999999999999999999999999999999974322
Q ss_pred cchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 566 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
. ............ .....++++.+... ..+..+.+++..||+.+|.+||++++|++.|+++....
T Consensus 267 ~--~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 267 D--PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp C--HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred C--HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 2 122222221111 12223333322211 12347889999999999999999999999999988753
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.2e-40 Score=352.54 Aligned_cols=246 Identities=25% Similarity=0.381 Sum_probs=201.8
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV 431 (679)
..|.+.+.||+|+||.||+|+.+ +|+.||+|++++.. ....+.+..|.+++..+ +||||+++++++.+.+..++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45667899999999999999986 68999999997532 23346678899999887 899999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999974 4568999999999999999999999 9999999999999999999999999999986432
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+ . +..+.. .
T Consensus 171 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~-i~~~~~------~ 236 (345)
T 1xjd_A 171 GDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFH---S-IRMDNP------F 236 (345)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHCCC------C
T ss_pred CCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHHH---H-HHhCCC------C
Confidence 221 233456999999999999999999999999999999999999999743321 1111 1 111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 626 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 626 (679)
. +......+.+++.+||+.||.+||++. ||+
T Consensus 237 ~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 Y----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 111234688999999999999999997 665
No 95
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.1e-40 Score=346.86 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=193.9
Q ss_pred HHHHhhccccCcCccEEEEEEEE----cCCcEEEEEEecCCc----chhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
...|++.+.||+|+||.||+|+. .+++.||+|++++.. ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 34677889999999999999987 478999999997642 2234567889999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999974 4568999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .. ...... ...
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~---~~~i~~-~~~--- 238 (327)
T 3a62_A 170 ESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KT---IDKILK-CKL--- 238 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HH---HHHHHH-TCC---
T ss_pred ccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HH---HHHHHh-CCC---
Confidence 6433222 223446899999999999989999999999999999999999999743321 11 111111 111
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 627 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 627 (679)
..+......+.+++.+||+.||.+|| ++.|+++
T Consensus 239 -------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 -------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11112234688999999999999999 7778775
No 96
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-40 Score=352.24 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=200.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|.+.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 4667899999999999999974 78999999986432 1223578899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+ +|+|.+++.. ...+++..++.++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 90 YA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred CC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99 7899998873 4579999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....||+.|+|||++.+..+ ++++|||||||++|+|++|+.||......... ..+...
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i~~~- 223 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKVNSC- 223 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCCCSS-
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHHcC-
Confidence 2 234468999999999988776 78999999999999999999999743322110 000000
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
....+......+.+++.+||+.||.+|||++|+++.
T Consensus 224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 001122233468899999999999999999999864
No 97
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.7e-40 Score=353.72 Aligned_cols=269 Identities=19% Similarity=0.271 Sum_probs=204.5
Q ss_pred HHhhccccCcC--ccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 358 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 358 ~~~~~~~LG~G--~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
.|++.+.||+| +||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 46778999999 99999999987 69999999997542 334567889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||.+......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999754 24569999999999999999999999 99999999999999999999999999988654322
Q ss_pred cc------cccccccCCccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHh----
Q 005750 513 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK---- 580 (679)
Q Consensus 513 ~~------~~~~~~~gt~~y~aPE~l~~--~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~---- 580 (679)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ..........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLD 259 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccc
Confidence 11 11122358899999999987 6789999999999999999999999974333211 1111100000
Q ss_pred c-----C-------------Ceeeeec---cc------ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHh
Q 005750 581 K-----G-------------DVISIVD---PV------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQD 631 (679)
Q Consensus 581 ~-----~-------------~~~~~~d---~~------l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~ 631 (679)
. . .....+. +. ............+.+++.+||+.||.+|||++|+++. +++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 0 0 0000000 00 0000112223468899999999999999999999864 444
Q ss_pred h
Q 005750 632 S 632 (679)
Q Consensus 632 ~ 632 (679)
+
T Consensus 340 ~ 340 (389)
T 3gni_B 340 I 340 (389)
T ss_dssp C
T ss_pred H
Confidence 3
No 98
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=354.91 Aligned_cols=271 Identities=22% Similarity=0.312 Sum_probs=214.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccc--eEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lV~E 433 (679)
.|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4667899999999999999987 58999999997543 234567889999999999999999999987654 7899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc----cCCCcEEEeeccCcccc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 509 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfgla~~~ 509 (679)
|+++|+|.+++........+++..++.++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999999865445559999999999999999999999 999999999999999 77888999999999876
Q ss_pred ccCcccccccccCCccccCCcccCC--------CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+........
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~ 242 (396)
T 4eut_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITG 242 (396)
T ss_dssp CCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHS
T ss_pred cCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcC
Confidence 54322 223458999999999864 4678899999999999999999999974332211 11112222221
Q ss_pred C---Ceeeee-----------cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 582 G---DVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 582 ~---~~~~~~-----------d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
. ...... +..............+.+++.+||+.||++||+++|+++.+++++..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1 111000 00111234467777899999999999999999999999999998774
No 99
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.1e-40 Score=345.27 Aligned_cols=263 Identities=21% Similarity=0.311 Sum_probs=190.7
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 35677899999999999999876 68999999987543 23346788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 435 MHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 435 ~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
++ |+|.+++.... ....+++..+..++.||+.||+|||+ +||+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 97 69998886432 23468999999999999999999999 9999999999999999999999999999987643
Q ss_pred CcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC--ee-e-
Q 005750 512 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD--VI-S- 586 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~-~- 586 (679)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... ....+........ .. .
T Consensus 161 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 161 PVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp CCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGG
T ss_pred Cccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhh
Confidence 3222 223458999999999876 468999999999999999999999997443321 1111111111000 00 0
Q ss_pred ----eecccc------------cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 587 ----IVDPVL------------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 587 ----~~d~~l------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
...+.. ...........+.+++.+||+.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 00000112346889999999999999999999986
No 100
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-39 Score=340.62 Aligned_cols=263 Identities=21% Similarity=0.304 Sum_probs=202.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 5778899999999999999875 7999999998752 23455778999999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 434 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
|+++++|.+++.... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999987432 35678999999999999999999999 99999999999999999999999999998875443
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...+.. .+.........
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~---- 259 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----KIEQCDYPPLP---- 259 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHH----HHHTTCSCCCC----
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHH----HhhcccCCCCc----
Confidence 221 22345899999999999999999999999999999999999999743221 111111 12222211111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.......+.+++.+||+.||.+|||++||++.|+++.....
T Consensus 260 ----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 260 ----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11223468899999999999999999999999999988644
No 101
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.5e-40 Score=341.38 Aligned_cols=264 Identities=30% Similarity=0.532 Sum_probs=199.3
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
.|+....|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|++++++++||||+++++++. ....+
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 95 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA 95 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccE
Confidence 3555667788899999999999999865 359999987543 344577999999999999999999999764 45689
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 96 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccc
Confidence 999999999999999643 4679999999999999999999999 99999999999999999999999999999765
Q ss_pred ccCc-ccccccccCCccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 510 EEDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 510 ~~~~-~~~~~~~~gt~~y~aPE~l~---~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
.... ........|++.|+|||.+. +..++.++||||||+++|+|++|+.||...... ....+. ...+...
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~----~~~~~~~ 244 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEM----VGRGSLS 244 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHH----HHHTSCC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHH----hcccccC
Confidence 4321 12223345899999999986 667899999999999999999999999743221 122222 2222221
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
..+. ......+..+.+++.+||+.+|.+|||++|+++.|+++..
T Consensus 245 ~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111 1122334578999999999999999999999999998754
No 102
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=343.52 Aligned_cols=268 Identities=25% Similarity=0.394 Sum_probs=204.5
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhc--cCCCccccccccccc----
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE---- 425 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpnIv~l~~~~~~~---- 425 (679)
.+.....|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++..+ +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 4455678889999999999999999887 899999998643 234455566666554 899999999998776
Q ss_pred ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CccccCCCCCCccccCCCc
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP--------GIIHRDVKSSNILLDINMR 497 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~--------~ivH~Dlkp~NIll~~~~~ 497 (679)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCC
Confidence 688999999999999999973 469999999999999999999998 6 9999999999999999999
Q ss_pred EEEeeccCccccccCcccc---cccccCCccccCCcccCCCCCCch------hHHHHHHHHHHHHHhC----------CC
Q 005750 498 AKVSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KK 558 (679)
Q Consensus 498 ~kL~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~s~k------sDVwSlGvll~elltG----------~~ 558 (679)
+||+|||++.......... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999999997654432221 123468999999999987665554 9999999999999999 66
Q ss_pred CCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 559 PVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 559 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
||....... ..... .......... .+..... ........+.+++.+||+.||.+|||++||++.|+++....
T Consensus 261 p~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 261 PYHDLVPSD-PSYED-MREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTTSCSS-CCHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHhhhcCCC-Cchhh-hHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 665322211 11111 1111111111 1111111 12256778999999999999999999999999999988754
No 103
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-39 Score=337.74 Aligned_cols=258 Identities=29% Similarity=0.457 Sum_probs=203.3
Q ss_pred HHhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccc-cccceEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILV 431 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-~~~~~~~lV 431 (679)
.|++.+.||+|+||.||+|.+.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++ ..++..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 35667899999999999998653 3368999987643 34557899999999999999999999985 556688999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 106 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 106 LPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999974 34568999999999999999999999 9999999999999999999999999999987644
Q ss_pred Ccc---cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 512 DLT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 512 ~~~---~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
... .......+++.|+|||.+.+..++.++||||||+++|+|++ |.+||...... ...... ..+...
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~~----~~~~~~-- 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYL----LQGRRL-- 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHHHH----HTTCCC--
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHH----hcCCCC--
Confidence 321 11223457789999999998899999999999999999999 55566532221 111111 111110
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+...+..+.+++.+||+.+|.+|||++|+++.|+++...-
T Consensus 252 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 252 -------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 001112346889999999999999999999999999988753
No 104
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4e-40 Score=360.84 Aligned_cols=254 Identities=23% Similarity=0.286 Sum_probs=203.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.++||+|+||+||+|+++ +++.||+|++.+... .....+.+|..++..++||||++++++|.+.+..++|||
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence 4566889999999999999987 488999999865321 122348899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 99999999999742 4679999999999999999999999 999999999999999999999999999998765544
Q ss_pred ccccccccCCccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 514 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~-----~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+.... ...+......-...
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~p--- 303 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERFQFP--- 303 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCCC---
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhccccccCC---
Confidence 44444567999999999986 56789999999999999999999999974432211 11111100001111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 628 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 628 (679)
.... .....+.+++.+||+.+|++ ||+++|+++.
T Consensus 304 --~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 --TQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --SSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --cccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0001 12346889999999888888 9999999863
No 105
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=375.13 Aligned_cols=260 Identities=27% Similarity=0.439 Sum_probs=212.3
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
+....+++.++||+|+||.||+|.++++..||||+++... ...+.+.+|+++|++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3345567889999999999999999988899999997643 335679999999999999999999999876 67899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999999743 23468999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
........++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...+ .+..+...
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~------- 483 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYRM------- 483 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HHHH----HHHTTCCC-------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC-------
Confidence 222233346789999999988899999999999999999999 99999743221 1122 12222111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+......+.+++.+||+.||++|||+++|++.|+++...
T Consensus 484 --~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 484 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 11122345788999999999999999999999999988754
No 106
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-39 Score=344.54 Aligned_cols=269 Identities=25% Similarity=0.404 Sum_probs=212.5
Q ss_pred hhHHHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHh--ccCCCcccccccccccc--
Q 005750 351 LPELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH-- 426 (679)
Q Consensus 351 ~~~l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~~~~-- 426 (679)
..+.....|.+.+.||+|+||.||+|++. ++.||||++... ..+.+.+|.+++.. ++||||+++++++....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 34566678888999999999999999985 899999998643 34667889999887 68999999999998765
Q ss_pred --eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCccccCCCCCCccccCCC
Q 005750 427 --QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINM 496 (679)
Q Consensus 427 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 496 (679)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+|+||||||+||+++.++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTS
T ss_pred cceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCC
Confidence 78999999999999999973 46899999999999999999999 7 8999999999999999999
Q ss_pred cEEEeeccCccccccCccc---ccccccCCccccCCcccCCC------CCCchhHHHHHHHHHHHHHhC----------C
Q 005750 497 RAKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------K 557 (679)
Q Consensus 497 ~~kL~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~l~~~------~~s~ksDVwSlGvll~elltG----------~ 557 (679)
.+||+|||++......... ......|++.|+|||++.+. .++.++|||||||++|+|++| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876543322 12344689999999998775 334789999999999999999 7
Q ss_pred CCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 558 KPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 558 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
.||...... ......+..... .... .+.+... ........+.+++.+||+.||.+|||++||++.|+++...+
T Consensus 265 ~p~~~~~~~-~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 265 LPYYDLVPS-DPSVEEMRKVVC-EQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CTTTTTSCS-SCCHHHHHHHHT-TSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCccccCcC-cccHHHHHHHHH-HHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 788633221 111222222211 1111 1111111 12356678999999999999999999999999999987754
No 107
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.4e-40 Score=359.79 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=201.9
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+++ +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 149 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4566889999999999999987 58999999986421 1123457899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|++||+|.+++.. ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 150 ~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 150 YMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 9999999999873 358999999999999999999999 999999999999999999999999999998765544
Q ss_pred ccccccccCCccccCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 514 THISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~----~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... ....+......-... +
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~~i~~~~~~~~~p---~ 296 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TYSKIMNHKNSLTFP---D 296 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTHHHHCCCC---T
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh---HHHHHHhccccccCC---C
Confidence 33344567999999999987654 7899999999999999999999997443221 111111100000000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 628 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 628 (679)
.......+.+++.+||+.+|.+ ||+++||++.
T Consensus 297 -------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 -------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0012246889999999999988 9999999864
No 108
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=346.91 Aligned_cols=258 Identities=23% Similarity=0.400 Sum_probs=201.5
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCc----EEEEEEecCC-cchhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
...|++.+.||+|+||.||+|.+. +++ .||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 445777899999999999999875 444 3577777543 3345678999999999999999999999998765 78
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+|+||+.+|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 999999999999999753 4569999999999999999999999 99999999999999999999999999999876
Q ss_pred ccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 510 EEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 510 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
...... ......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||....... +... +..+...
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~----~~~~~~~-- 238 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERL-- 238 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCC--
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcCCCC--
Confidence 443221 1223346788999999999999999999999999999999 999997443322 2121 1111110
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+......+.+++.+||+.||.+|||++|+++.|+++...
T Consensus 239 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 -------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 11122334688999999999999999999999999998764
No 109
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.8e-40 Score=346.16 Aligned_cols=262 Identities=29% Similarity=0.483 Sum_probs=205.4
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcC-----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccce
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 427 (679)
+....|.+.+.||+|+||.||+|.+.. +..||+|++.... ......+.+|++++++++||||+++++++...+.
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 344556667899999999999998753 2469999997643 3345678999999999999999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999742 4679999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 508 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 508 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
........ ......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||...... .+.+ .+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~----~~~~~~~ 268 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMK----AINDGFR 268 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHCCCc
Confidence 76543221 1122335778999999998899999999999999999999 99999733221 1111 1222211
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
. ..+......+.+++.+||+.+|.+||++.|+++.|+++....
T Consensus 269 ~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 269 L---------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp C---------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred C---------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 111123447889999999999999999999999999988743
No 110
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=352.24 Aligned_cols=251 Identities=23% Similarity=0.323 Sum_probs=200.1
Q ss_pred ccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCCcH
Q 005750 362 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876666678899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc--cCCCcEEEeeccCccccccCcccccc
Q 005750 441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 518 (679)
Q Consensus 441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kL~Dfgla~~~~~~~~~~~~ 518 (679)
.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++........ ..
T Consensus 174 ~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIIDE--SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 9988642 3568999999999999999999999 999999999999999 5678999999999987654322 22
Q ss_pred cccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCH
Q 005750 519 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 598 (679)
Q Consensus 519 ~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 598 (679)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .......... .. ......
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~--~~-~~~~~~---- 313 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRW--DL-EDEEFQ---- 313 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCC--CS-CSGGGT----
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccC--CC-Chhhhc----
Confidence 3458999999999999999999999999999999999999997433211 1111111110 00 011111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhh
Q 005750 599 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS 632 (679)
Q Consensus 599 ~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~ 632 (679)
.....+.+++.+||+.||.+|||++|+++ .+++.
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 12346889999999999999999999997 45544
No 111
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=347.03 Aligned_cols=274 Identities=24% Similarity=0.382 Sum_probs=198.9
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHH--HHhccCCCcccccccc-----cccceEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYC-----EEEHQRI 429 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~hpnIv~l~~~~-----~~~~~~~ 429 (679)
..|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+ ......+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 3567789999999999999987 58999999986432 3334444444 4558999999999743 3445678
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CccccCCCCCCccccCCCcEEE
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKV 500 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~---------~ivH~Dlkp~NIll~~~~~~kL 500 (679)
+||||+++|+|.+++.. ...++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||
T Consensus 89 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEE
Confidence 99999999999999973 345889999999999999999998 7 9999999999999999999999
Q ss_pred eeccCccccccCcc-------cccccccCCccccCCcccCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCccccc
Q 005750 501 SDFGLSRQAEEDLT-------HISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 566 (679)
Q Consensus 501 ~Dfgla~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~-------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~ 566 (679)
+|||++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643221 11223458999999999987 45678999999999999999997776522221
Q ss_pred ch-hh----------HHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 567 AE-LN----------IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 567 ~~-~~----------~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
.. .. .................+.... .........+.+++.+||+.||++|||++|+++.|++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 10 00 0001111111111111111111 11234566799999999999999999999999999999986
Q ss_pred hcCCCCcc
Q 005750 636 EKGGDQKF 643 (679)
Q Consensus 636 ~~~~~~~~ 643 (679)
-+....+.
T Consensus 320 ~~~~~~~~ 327 (336)
T 3g2f_A 320 WERNKSVS 327 (336)
T ss_dssp CCC-----
T ss_pred HHhcccCC
Confidence 55544443
No 112
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=335.38 Aligned_cols=260 Identities=27% Similarity=0.395 Sum_probs=206.0
Q ss_pred HhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCcccccccccccceE-EEEE
Q 005750 359 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVY 432 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~lV~ 432 (679)
+...+.||+|+||.||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 3446899999999999998642 23799999876433 4557889999999999999999999999766655 9999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+.+|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 103 e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 103 PYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999975 35678999999999999999999999 99999999999999999999999999999865433
Q ss_pred cc---cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 513 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 513 ~~---~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
.. .......+++.|+|||.+.+..++.++|||||||++|+|++|..|+..... ......... .+...
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~----~~~~~---- 247 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHFLA----QGRRL---- 247 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHHHH----TTCCC----
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHHhh----cCCCC----
Confidence 21 122234578899999999999999999999999999999996655542222 112222211 11110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcC
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 638 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 638 (679)
..+......+.+++.+||+.||.+|||++|+++.|+++......
T Consensus 248 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 248 -----PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -----CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 11112234688999999999999999999999999999876443
No 113
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.5e-40 Score=349.25 Aligned_cols=243 Identities=23% Similarity=0.297 Sum_probs=202.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4667899999999999999986 69999999986532 2234678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 122 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999974 3568999999999999999999999 99999999999999999999999999999876443
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .. ... +..+.. .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~---~~~-i~~~~~------~-- 256 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QI---YEK-IVSGKV------R-- 256 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHH-HHHCCC------C--
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---HH---HHH-HHcCCC------C--
Confidence 22346899999999999999999999999999999999999999743221 11 111 111211 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 627 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 627 (679)
.+......+.+++.+||+.||.+||+ ++||++
T Consensus 257 --~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 --FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11122346889999999999999998 888875
No 114
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=343.02 Aligned_cols=262 Identities=22% Similarity=0.298 Sum_probs=206.2
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCccccccccc----ccceEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRIL 430 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~----~~~~~~l 430 (679)
...|++.+.||+|+||.||++... +++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 345778899999999999999974 79999999987665666788999999999999999999999986 3457899
Q ss_pred EEEecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 431 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 999999999999987532 35679999999999999999999999 99999999999999999999999999998765
Q ss_pred ccCccc--------ccccccCCccccCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 005750 510 EEDLTH--------ISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 578 (679)
Q Consensus 510 ~~~~~~--------~~~~~~gt~~y~aPE~l~~~~---~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 578 (679)
...... ......|++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...... ........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~--- 260 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK-GDSVALAV--- 260 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT-TSCHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc-cchhhHHh---
Confidence 322111 011234789999999987654 688999999999999999999999621111 11111111
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
... . . ..........+.+++.+||+.||.+|||++|+++.|+.+..
T Consensus 261 -~~~-~-~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 -QNQ-L-S-------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp -HCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred -hcc-C-C-------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 110 0 0 00111223478899999999999999999999999998754
No 115
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-39 Score=340.08 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=200.3
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 45777899999999999999976 689999999875432 23467899999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 114 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 114 RLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp ECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999974 4568999999999999999999999 99999999999999999999999999999876544
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+..... . +
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~-~---~-- 254 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIP-R---P-- 254 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCC-C---G--
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCC-C---c--
Confidence 333333456899999999999999999999999999999999999999733221 11112221110 0 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhhhh
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIE 636 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~ 636 (679)
.......+..+.+++.+||+.||++|| +++++++.|+......
T Consensus 255 -~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 -STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 001112233688999999999999999 9999999999877643
No 116
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-40 Score=343.42 Aligned_cols=266 Identities=24% Similarity=0.284 Sum_probs=198.6
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-----chhHHHHHHHHHHHHhcc---CCCcccccccc
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIH---HRNLVPLIGYC 422 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~ 422 (679)
.++....|++.+.||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 4455667888999999999999999975 68999999986322 112346677888877775 99999999998
Q ss_pred cccc-----eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc
Q 005750 423 EEEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 497 (679)
Q Consensus 423 ~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 497 (679)
.... ..++||||+. |+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 7644 5799999996 6999999854 23459999999999999999999999 99999999999999999999
Q ss_pred EEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 005750 498 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 498 ~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 577 (679)
+||+|||++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHH
T ss_pred EEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence 99999999987644322 234468999999999998899999999999999999999999997433221 1111111
Q ss_pred hHhcC---Ceeeee---cccccC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 578 MIKKG---DVISIV---DPVLIG-------NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 578 ~~~~~---~~~~~~---d~~l~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..... ...... ...... .........+.+++.+||+.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11110 000000 000000 001122347889999999999999999999986
No 117
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.2e-39 Score=333.74 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=204.4
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
...|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 356788899999999999999887 5789999999776556678899999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCcccccc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~~~ 511 (679)
+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 88 CTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999998874 4568999999999999999999999 999999999999999 7889999999999987654
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
... .....|++.|+|||.+.+. ++.++||||||+++|+|++|+.||...... .... .+..+.... ...
T Consensus 162 ~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~~-~~~- 229 (277)
T 3f3z_A 162 GKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS---EVML----KIREGTFTF-PEK- 229 (277)
T ss_dssp TSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCCC-CHH-
T ss_pred ccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHhCCCCC-Cch-
Confidence 322 2334589999999998765 899999999999999999999999743221 1111 111111100 000
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... .....+.+++.+||+.||.+|||+.|+++
T Consensus 230 ~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 12346889999999999999999999986
No 118
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.7e-40 Score=348.15 Aligned_cols=257 Identities=24% Similarity=0.403 Sum_probs=202.8
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCc----EEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
..|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 45667899999999999999875 344 38888875432 233456778999999999999999999986 456899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 99999999999999743 3578899999999999999999999 999999999999999999999999999998765
Q ss_pred cCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 511 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 511 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
..... ......++..|+|||++.+..++.++|||||||++|+|++ |+.||....... ..+. +..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~~~~~~- 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDL----LEKGERLAQ- 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHH----HHTTCBCCC-
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHH----HHcCCCCCC-
Confidence 43322 2234457889999999998899999999999999999999 999997443322 1111 112211111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
+......+.+++.+||+.||.+|||++|+++.|+++...
T Consensus 239 --------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 --------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011122467999999999999999999999999998753
No 119
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=342.93 Aligned_cols=264 Identities=23% Similarity=0.297 Sum_probs=198.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 3567899999999999999986 589999999865432 3356788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++++|.+++. ....+++..+..++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 84 CDHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CSEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999887 35669999999999999999999999 9999999999999999999999999999987654322
Q ss_pred cccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH--------HhHhcCCee
Q 005750 515 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKGDVI 585 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~ 585 (679)
. .....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||................ .........
T Consensus 158 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 Y-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred c-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2 223458999999999865 678999999999999999999999997543322211111100 000000000
Q ss_pred ---eeecccccCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 586 ---SIVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 586 ---~~~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
...++..... ........+.+++.+||+.||.+|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 001223468899999999999999999999863
No 120
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-39 Score=335.80 Aligned_cols=244 Identities=24% Similarity=0.366 Sum_probs=179.7
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 3667899999999999999875 68999999987542 2335678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+ +++|.+.+.. ...+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 99 7788888763 4579999999999999999999999 999999999999999999999999999997654432
Q ss_pred ccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||....... ... .+..+..
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~----~~~~~~~-------- 229 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFK----NISNGVY-------- 229 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCC--------
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhCCC--------
Confidence 2 223458999999999987765 789999999999999999999997433211 111 1111111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..+......+.+++.+||+.||.+|||++|+++
T Consensus 230 --~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 --TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 011112346889999999999999999999975
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=347.59 Aligned_cols=249 Identities=24% Similarity=0.335 Sum_probs=188.3
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
..|++.+.||+|+||.||+|++. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 34677899999999999999987 58899999997542 3466889999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCccccccC
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~~~~~~ 512 (679)
++|+|.+++.. ...+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||++......
T Consensus 131 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 131 TGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999973 4568999999999999999999999 99999999999999975 889999999999875433
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... . ... .. +...... ...
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~-~~~---~~-i~~~~~~-~~~--- 272 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-Q-FMF---RR-ILNCEYY-FIS--- 272 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-H-HHH---HH-HHTTCCC-CCT---
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-H-HHH---HH-HHhCCCc-cCC---
Confidence 2 123345899999999999999999999999999999999999999733221 1 111 11 1111110 111
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.........+.+++.+||+.||++|||+.|+++
T Consensus 273 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 --PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111123347889999999999999999999986
No 122
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-39 Score=349.43 Aligned_cols=252 Identities=23% Similarity=0.284 Sum_probs=193.5
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
..|++.+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 35778899999999999999987 78999999997543 23466889999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc--EEEeeccCccccccCc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDL 513 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfgla~~~~~~~ 513 (679)
++|+|.+++.. ...+++..++.++.|++.||+|||+ +||+||||||+||+++.++. +||+|||+++......
T Consensus 99 ~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 99 SGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999873 4569999999999999999999999 99999999999999987665 9999999987533221
Q ss_pred ccccccccCCccccCCcccCCCCCCch-hHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~k-sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||....... ............ ... .
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~-~~~-~----- 241 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSV-KYS-I----- 241 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTT-CCC-C-----
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcC-CCC-C-----
Confidence 1233458999999999988777655 899999999999999999997433321 122222222211 110 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.........+.+++.+||+.||.+|||++|+++.
T Consensus 242 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 --PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred --CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0001123468899999999999999999999874
No 123
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.5e-40 Score=349.06 Aligned_cols=249 Identities=25% Similarity=0.337 Sum_probs=202.2
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~ 429 (679)
....|++.+.||+|+||.||+|+.+ +++.||+|++++.. ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3345777899999999999999987 48899999997532 23346688899999988 7999999999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||++||+|.+++.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999974 3569999999999999999999999 99999999999999999999999999999864
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+ ...... +..
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~---~~~i~~-~~~----- 238 (353)
T 2i0e_A 172 IWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---EL---FQSIME-HNV----- 238 (353)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHHH-CCC-----
T ss_pred ccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HH---HHHHHh-CCC-----
Confidence 32222 233456999999999999999999999999999999999999999743321 11 111111 111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 627 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 627 (679)
.++......+.+++.+||+.||.+||+ ++||++
T Consensus 239 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 011122346889999999999999995 466654
No 124
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.6e-39 Score=335.42 Aligned_cols=257 Identities=24% Similarity=0.375 Sum_probs=208.8
Q ss_pred hhHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc-----
Q 005750 351 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----- 424 (679)
Q Consensus 351 ~~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----- 424 (679)
.+......|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp CCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred ccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 34556677888999999999999999987 79999999987543 356789999999999999999998754
Q ss_pred -----------cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 425 -----------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 425 -----------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEc
Confidence 45689999999999999999754 24578999999999999999999999 9999999999999999
Q ss_pred CCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHH
Q 005750 494 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 573 (679)
Q Consensus 494 ~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~ 573 (679)
.++.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|..|+... ..
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~ 226 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SK 226 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HH
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HH
Confidence 999999999999987654322 22345899999999999989999999999999999999999887511 11
Q ss_pred HHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhcC
Q 005750 574 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 638 (679)
Q Consensus 574 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 638 (679)
.. ..+..+... ..+ ...+.+++.+||+.||.+|||+.|+++.|+.+....+.
T Consensus 227 ~~-~~~~~~~~~--------~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 227 FF-TDLRDGIIS--------DIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp HH-HHHHTTCCC--------TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred HH-HHhhccccc--------ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 11 111222111 111 23578999999999999999999999999988775443
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.2e-39 Score=339.32 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=205.5
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch------hHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
...|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456888999999999999999987 6899999998654221 357799999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC----cEEEeecc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 504 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg 504 (679)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999973 5678999999999999999999999 9999999999999999887 79999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
++........ .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... .... . +.....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~---~-i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLA---N-ITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---H-HHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---HHHH---H-HHhccc
Confidence 9987654322 23345899999999999999999999999999999999999999743221 1111 1 111110
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..++..... ....+.+++.+||+.||.+|||++|+++
T Consensus 236 --~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001111111 2246889999999999999999999986
No 126
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=346.68 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=195.2
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--chhHHHHHHHHHHHHhccC--CCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.+++..++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 466789999999999999999889999999986542 3345778999999999976 999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
+.+++|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++ ++.+||+|||++.......
T Consensus 90 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp -CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred -CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999984 5678999999999999999999999 9999999999999997 6789999999998765433
Q ss_pred cc-ccccccCCccccCCcccCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 514 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 514 ~~-~~~~~~gt~~y~aPE~l~~-----------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... . ..........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~----~~~~~~~~~~ 236 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-Q----ISKLHAIIDP 236 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-H----HHHHHHHHCT
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-H----HHHHHHHhcC
Confidence 22 2234568999999999854 6789999999999999999999999973211 1 1111111211
Q ss_pred CCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 582 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 582 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.. ....+......+.+++.+||+.||.+|||+.|+++.
T Consensus 237 ~~---------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 237 NH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TS---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cc---------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11 111111123468899999999999999999999864
No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.9e-40 Score=345.58 Aligned_cols=262 Identities=24% Similarity=0.428 Sum_probs=211.7
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCcccccccccccc
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 426 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 426 (679)
+....|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 33456778899999999999999765 378899999975433 34567899999999999999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEE
Q 005750 427 QRILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 499 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 499 (679)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEE
Confidence 9999999999999999987532 12467899999999999999999999 9999999999999999999999
Q ss_pred EeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 005750 500 VSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 500 L~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 577 (679)
|+|||++......... ......+++.|+|||++.+..++.++|||||||++|+|++ |+.||...... ....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~---- 251 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---QVLR---- 251 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---HHHH----
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---HHHH----
Confidence 9999999865443221 2223346889999999988889999999999999999999 89999743221 1111
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
.+..+.... ........+.+++.+||+.||.+|||+.|+++.|++...
T Consensus 252 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 252 FVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 122222111 112233468899999999999999999999999998766
No 128
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=343.50 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=198.1
Q ss_pred hhHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 351 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 351 ~~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
..++....|++.++||+|+||+||+|++. +|+.||||++.... .........|+..+.++ +||||+++++++.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34566778889999999999999999987 79999999986543 23344556666666665 8999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 506 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla 506 (679)
..++||||+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 67998888753 4569999999999999999999999 99999999999999999999999999998
Q ss_pred cccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
........ .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..... . ..+..+...
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~-----~~~~~~~~~- 270 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----W-----QQLRQGYLP- 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----H-----HHHTTTCCC-
T ss_pred eecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----H-----HHHhccCCC-
Confidence 87644322 233458999999999886 689999999999999999999777652111 1 111111111
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+.... .....+.+++.+||+.||++|||++|+++
T Consensus 271 ---~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111 12347889999999999999999999986
No 129
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.6e-39 Score=334.16 Aligned_cols=265 Identities=23% Similarity=0.311 Sum_probs=206.5
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccc-cccceEEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYE 433 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-~~~~~~~lV~E 433 (679)
...|++.+.||+|+||.||+|++. +++.||||++.... ....+.+|+++++.++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 356778899999999999999874 78999999875432 224578899999999988877777665 56778899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCccccc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~~ 510 (679)
|+ +++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++....
T Consensus 86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred cc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 99 99999998742 4569999999999999999999999 999999999999999 789999999999998765
Q ss_pred cCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 511 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 511 ~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
..... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||........................
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 43321 123456899999999999999999999999999999999999999854433222222221111111110
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+..... .+..+.+++.+||+.||++|||++||++.|+++.....
T Consensus 240 -----~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -----EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----hhhhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 000111 12478899999999999999999999999999987544
No 130
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=349.94 Aligned_cols=258 Identities=29% Similarity=0.443 Sum_probs=197.4
Q ss_pred HhhccccCcCccEEEEEEEEc--C--CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCccccccccc-ccceEEEEE
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK--D--GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 432 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~--~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lV~ 432 (679)
|++.+.||+|+||.||+|.+. + +..||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 456789999999999999864 2 2468999987543 345678999999999999999999999864 456789999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++.. ....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999974 34568999999999999999999999 99999999999999999999999999999865433
Q ss_pred ccc---ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 513 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 513 ~~~---~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
... ......+++.|+|||.+.+..++.++|||||||++|||++ |.+||......+ ....+ ..+... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~----~~~~~~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGRRL--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH----HTTCCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH----HcCCCC--C
Confidence 211 1223346788999999998899999999999999999999 677776333222 11111 111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.+...+..+.+++.+||+.||.+|||++|+++.|+++...-.
T Consensus 317 -------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 317 -------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 111223478899999999999999999999999999987543
No 131
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.6e-39 Score=333.12 Aligned_cols=263 Identities=23% Similarity=0.313 Sum_probs=207.3
Q ss_pred HHhhccccCcCccEEEEEEEE-cCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccc-cccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-~~~~~~~lV~E~~ 435 (679)
.|++.+.||+|+||.||+|++ .+++.||+|++..... .+.+.+|+++++.++|++++..+.++ ...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 466789999999999999997 4799999999865432 34688999999999988877766655 5567789999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCccccccC
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~~~~ 512 (679)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++......
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999999742 4579999999999999999999999 999999999999999 48899999999999876544
Q ss_pred ccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 513 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 513 ~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
... ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch--
Confidence 321 123446899999999999999999999999999999999999999854433222222221111111000
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+.+... .+..+.+++.+||+.||.+|||++||++.|+++.....
T Consensus 240 ---~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 ---EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ---HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---HHHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 001111 22468899999999999999999999999999887544
No 132
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.5e-39 Score=341.31 Aligned_cols=263 Identities=26% Similarity=0.433 Sum_probs=200.4
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccc-
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH- 426 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~- 426 (679)
+....|.+.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34456777899999999999999765 3458999998754 2344577899999999999999999999987654
Q ss_pred ----eEEEEEEecCCCcHhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEE
Q 005750 427 ----QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 499 (679)
Q Consensus 427 ----~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 499 (679)
..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEE
Confidence 3599999999999999985322 34679999999999999999999999 9999999999999999999999
Q ss_pred EeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 005750 500 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 500 L~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 577 (679)
|+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... .....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~-- 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYDYL-- 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH--
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHHH--
Confidence 999999987644322 12223446889999999999999999999999999999999 899997433321 11111
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
..+... ..+......+.+++.+||+.||.+|||++++++.|+++...
T Consensus 263 --~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 263 --LHGHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --HTTCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HcCCCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111111 11112234788999999999999999999999999998764
No 133
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=356.59 Aligned_cols=254 Identities=24% Similarity=0.252 Sum_probs=201.6
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. ....+.+.+|..++..++||||+++++++.+.+..|+||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 34566789999999999999986 69999999997532 122345889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++... +..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 141 E~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp CCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred cCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 999999999999742 3479999999999999999999999 99999999999999999999999999999876554
Q ss_pred cccccccccCCccccCCcccC-------CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 513 LTHISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~-------~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||...+.... ...+......-..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~~~- 291 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEHLSL- 291 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC-
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH---HHHHHhcccCcCC-
Confidence 433334457999999999986 45789999999999999999999999974332211 1111110000000
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVLA 628 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~~ 628 (679)
+.. .......+.+++.+||+ +|.+| |+++||++.
T Consensus 292 ----p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ----PLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ----C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ----Ccc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 100 11123468899999999 99998 589998753
No 134
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.4e-40 Score=345.27 Aligned_cols=260 Identities=24% Similarity=0.364 Sum_probs=197.0
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccc----eE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QR 428 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~ 428 (679)
..|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 35777899999999999999874 78999999997642 233467889999999999999999999987654 34
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999999999974 4579999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 509 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 509 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~ 239 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPP 239 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCH
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCCc
Confidence 6543221 223345899999999999999999999999999999999999999743221 11111222111110
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHhhhhh
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV-LAIQDSIKI 635 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl-~~L~~~~~~ 635 (679)
... .......+.+++.+||+.||.+||++.+++ +.+......
T Consensus 240 ---~~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 240 ---SAR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---HHH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---ccc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 000 011234688999999999999999666554 556555443
No 135
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-39 Score=337.78 Aligned_cols=258 Identities=26% Similarity=0.424 Sum_probs=206.2
Q ss_pred HHHhhcc-ccCcCccEEEEEEEEc---CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 357 ATNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 357 ~~~~~~~-~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
..|.+.+ .||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3455666 8999999999999653 47889999997543 23357899999999999999999999999 5567899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 9999999999999984 4569999999999999999999999 999999999999999999999999999998765
Q ss_pred cCcccc--cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 511 EDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 511 ~~~~~~--~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
...... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... .... .+..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~~-- 239 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERM-- 239 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCC--
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCCC--
Confidence 433221 122336788999999988889999999999999999999 99999743221 1111 12222111
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
..+......+.+++.+||+.||.+||++.|+++.|+++.....
T Consensus 240 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 240 -------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1112234578899999999999999999999999999887544
No 136
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-39 Score=341.09 Aligned_cols=264 Identities=27% Similarity=0.432 Sum_probs=211.1
Q ss_pred HHHHhhccccCcCccEEEEEEEE------cCCcEEEEEEecCCcc-hhHHHHHHHHHHHHhc-cCCCcccccccccccc-
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH- 426 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~- 426 (679)
...|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45677889999999999999975 2468999999976543 3456789999999999 7999999999987654
Q ss_pred eEEEEEEecCCCcHhhhhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+ ++|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEEC
Confidence 58999999999999999985431 1238999999999999999999999 9999999999999999
Q ss_pred CCCcEEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhH
Q 005750 494 INMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 571 (679)
Q Consensus 494 ~~~~~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~ 571 (679)
.++.+||+|||++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |+.||....... ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~ 260 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF 260 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HH
Confidence 999999999999987644322 22233457889999999988899999999999999999998 999997433221 11
Q ss_pred HHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 572 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 572 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.. .+..+.... .+......+.+++.+||+.||.+|||+.||++.|+++.+...
T Consensus 261 ~~----~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 261 CR----RLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp HH----HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HH----HhccCccCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11 122221111 111123468899999999999999999999999999987543
No 137
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=343.94 Aligned_cols=266 Identities=28% Similarity=0.443 Sum_probs=211.7
Q ss_pred HHHHhhccccCcCccEEEEEEEE-----cCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc--eE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~ 428 (679)
...|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 44567789999999999999984 368999999998776667788999999999999999999999886644 78
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999999753 3568999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCccccc---------chhhHHHHHHH
Q 005750 509 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 577 (679)
Q Consensus 509 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~---------~~~~~~~~~~~ 577 (679)
....... ......++..|+|||.+.+..++.++|||||||++|+|++|..||...... ........+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 6543321 122334677899999998888999999999999999999999998632110 00111111122
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
.+..+... ..+...+..+.+++.+||+.||.+|||+.||++.|+++...
T Consensus 275 ~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22221111 11222345788999999999999999999999999998763
No 138
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.5e-39 Score=330.22 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=204.3
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 56778899999999999999886 68999999986432 34457889999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++++|.+++. ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 35679999999999999999999999 9999999999999999999999999999986543221
Q ss_pred -cccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 515 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 515 -~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ......+.. .... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~----~~~~---~---- 228 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKE----KKTY---L---- 228 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-SHHHHHHHT----TCTT---S----
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHhhh----cccc---c----
Confidence 12234568999999999987665 78999999999999999999999743322 112222211 1000 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.........+.+++.+||+.||.+|||++|+++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 --NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001122346889999999999999999999876
No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-39 Score=346.22 Aligned_cols=251 Identities=24% Similarity=0.326 Sum_probs=201.0
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
...|++.+.||+|+||.||+|..+ +++.||+|++.+... ...+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456788899999999999999887 689999999975432 235688888888 79999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC----CcEEEeeccCcccc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 509 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfgla~~~ 509 (679)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ +||+||||||+|||+.++ +.+||+|||++...
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999973 5679999999999999999999999 999999999999998432 35999999999876
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..........+.. .+..+...
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~i~~~~~~---- 241 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA----RIGSGKFS---- 241 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH----HHHHCCCC----
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH----HHccCCcc----
Confidence 54322 2234468999999999988888999999999999999999999997433222222222 22222221
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+...........+.+++.+||+.||.+|||+.|+++
T Consensus 242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111223347889999999999999999999986
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.5e-39 Score=333.26 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=198.7
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
...|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356888999999999999999876 68999999987543 3345789999999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCcccc
Q 005750 434 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQA 509 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~ 509 (679)
|+++|+|.+.+.... ....+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999886432 34679999999999999999999999 999999999999999 45688999999999875
Q ss_pred ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 589 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 589 (679)
..... .....|++.|+|||++.+ .++.++|||||||++|+|++|+.||....... ... .... ........
T Consensus 178 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~---~~~~-~~~~~~~~ 247 (285)
T 3is5_A 178 KSDEH--STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQ---KATY-KEPNYAVE 247 (285)
T ss_dssp -----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH---HHHH-CCCCCCC-
T ss_pred CCccc--CcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHh---hhcc-CCcccccc
Confidence 44322 233458999999999864 68999999999999999999999997433221 111 1111 11000000
Q ss_pred ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... ....+.+++.+||+.||.+|||++|+++
T Consensus 248 ---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1246789999999999999999999985
No 141
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-39 Score=346.36 Aligned_cols=256 Identities=25% Similarity=0.295 Sum_probs=199.3
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC-----cchhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
...|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 466788999999999999999875 6889999998643 2345578999999999999999999999999999999
Q ss_pred EEEEecCCCcHhhhhcccC-------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 005750 430 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 472 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qia~aL~~L 472 (679)
+||||+++|+|.+++.... ....+++..++.++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985211 022346778889999999999999
Q ss_pred HhcCCCCccccCCCCCCccccCCC--cEEEeeccCccccccCcc---cccccccCCccccCCcccCC--CCCCchhHHHH
Q 005750 473 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDLT---HISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 545 (679)
Q Consensus 473 H~~~~~~ivH~Dlkp~NIll~~~~--~~kL~Dfgla~~~~~~~~---~~~~~~~gt~~y~aPE~l~~--~~~s~ksDVwS 545 (679)
|+ ++|+||||||+||+++.++ .+||+|||++........ .......||+.|+|||++.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 99 9999999999999998776 899999999986543221 12234568999999999865 67899999999
Q ss_pred HHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005750 546 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 625 (679)
Q Consensus 546 lGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 625 (679)
|||++|+|++|+.||...... +............. .+ ........+.+++.+||+.||.+|||+.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLCFE--NP-----NYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCTT--SG-----GGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccccC--Cc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999743321 11112222111000 00 011123468899999999999999999999
Q ss_pred HH
Q 005750 626 VL 627 (679)
Q Consensus 626 l~ 627 (679)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-39 Score=335.37 Aligned_cols=245 Identities=26% Similarity=0.414 Sum_probs=199.3
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (279)
T 3fdn_A 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 89 (279)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence 4667899999999999999876 578999999864321 224678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++.. ...+++..++.++.|++.||+|||+ .||+||||||+||+++.++.++|+|||++.......
T Consensus 90 ~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 90 YAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999874 3568999999999999999999998 999999999999999999999999999986544322
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... . +.....
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~--------- 224 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYK---R-ISRVEF--------- 224 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH---H-HHHTCC---------
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH---HHH---H-HHhCCC---------
Confidence 223458999999999999999999999999999999999999997433221 111 1 111110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
..+......+.+++.+||+.||.+|||++|+++.
T Consensus 225 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 -TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111223468899999999999999999999974
No 143
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=345.81 Aligned_cols=269 Identities=19% Similarity=0.202 Sum_probs=201.7
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc----CCcEEEEEEecCCcch-----------hHHHHHHHHHHHHhccCCCccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVP 417 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~hpnIv~ 417 (679)
++....|.+.+.||+|+||.||+|.+. ++..||+|+....... ....+.+|+..++.++||||++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 344456778899999999999999886 5788999998754321 1134667889999999999999
Q ss_pred ccccccc----cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 418 LIGYCEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 418 l~~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
+++++.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 9999877 77899999999 9999999984 3379999999999999999999999 9999999999999998
Q ss_pred CCC--cEEEeeccCccccccCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccc
Q 005750 494 INM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 565 (679)
Q Consensus 494 ~~~--~~kL~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~ 565 (679)
.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 265 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK 265 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 877 9999999999876433211 11344689999999999999999999999999999999999999963222
Q ss_pred cchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 566 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
. .......... .... ....+..... ....+..+.+++.+||+.||.+|||+++|++.|+++..
T Consensus 266 ~-~~~~~~~~~~-~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 266 D-PVAVQTAKTN-LLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp C-HHHHHHHHHH-HHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred c-cHHHHHHHHh-hccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1 1111111111 1111 0000000000 00223478899999999999999999999999987654
No 144
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.6e-39 Score=336.95 Aligned_cols=250 Identities=26% Similarity=0.405 Sum_probs=202.7
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
...|.+.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457788999999999999999886 6999999999866555556789999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCcccccc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~~~ 511 (679)
+++++|.+++.. ...+++..++.++.|++.||.|||+ .+|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999874 4568999999999999999999999 999999999999999 7889999999999876543
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.. .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+ .+..+... ...
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~----~i~~~~~~--~~~- 228 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLFE----KIKEGYYE--FES- 228 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHCCCC--CCT-
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCCC--CCc-
Confidence 21 22335899999999999999999999999999999999999999743221 1111 11122110 011
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.........+.+++.+||+.||.+|||++|+++
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 ---PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ---TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ---cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111123357889999999999999999999986
No 145
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.7e-39 Score=346.24 Aligned_cols=263 Identities=24% Similarity=0.262 Sum_probs=204.1
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-----CCCccccccccccc
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEEE 425 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----hpnIv~l~~~~~~~ 425 (679)
.++....|.+.++||+|+||.||+|++. +++.||||++... ....+.+..|+++++.++ ||||+++++++...
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~ 108 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY 108 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence 3444557888999999999999999885 6899999999743 344566788999999996 99999999999999
Q ss_pred ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-----------
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI----------- 494 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~----------- 494 (679)
+..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 109 ~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 109 DHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp TEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred CeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchh
Confidence 9999999999 99999999854 23468999999999999999999999 99999999999999975
Q ss_pred --------------CCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005750 495 --------------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 560 (679)
Q Consensus 495 --------------~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf 560 (679)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 7899999999998654322 2346899999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHhHhcC-----------Ceeeeecc-c----ccCCC-CH---------------HHHHHHHHHH
Q 005750 561 SVEDFGAELNIVHWARSMIKKG-----------DVISIVDP-V----LIGNV-KI---------------ESIWRIAEVA 608 (679)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~-~----l~~~~-~~---------------~~~~~l~~li 608 (679)
......... ..+....... .....++. . ..... .. .....+.+++
T Consensus 260 ~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 336 (360)
T 3llt_A 260 RTHEHMEHL---AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL 336 (360)
T ss_dssp CCSSHHHHH---HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred CCCcHHHHH---HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence 744322211 1111111000 00000000 0 00000 00 0114677999
Q ss_pred HHhcccCCCCCCCHHHHHH
Q 005750 609 IQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 609 ~~cl~~dP~~RPt~~evl~ 627 (679)
.+||+.||.+|||++|+++
T Consensus 337 ~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 337 YSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcCChhhCCCHHHHhc
Confidence 9999999999999999975
No 146
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.6e-40 Score=346.34 Aligned_cols=264 Identities=30% Similarity=0.502 Sum_probs=208.9
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEc-CCcE--EEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
+.+....|++.+.||+|+||.||+|++. ++.. ||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp SBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 3444466788999999999999999876 5664 4999887532 33456789999999999 8999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEc
Confidence 9999999999999999997532 23479999999999999999999999 9999999999999999
Q ss_pred CCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHH
Q 005750 494 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 572 (679)
Q Consensus 494 ~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~ 572 (679)
.++.+||+|||++........ .....+++.|+|||++.+..++.++|||||||++|+|++ |+.||......
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------ 248 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ 248 (327)
T ss_dssp GGGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------
T ss_pred CCCeEEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------
Confidence 999999999999875432211 122346789999999988889999999999999999998 99999743221
Q ss_pred HHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 573 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 573 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
+... .+..+... ..+......+.+++.+||+.+|.+|||++|+++.|+++....
T Consensus 249 ~~~~-~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 249 ELYE-KLPQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHH-HGGGTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHH-HhhcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111 12222110 111223357889999999999999999999999999988754
No 147
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=344.34 Aligned_cols=265 Identities=16% Similarity=0.196 Sum_probs=206.7
Q ss_pred HHHhhccccCcCccEEEEEEEEcC---------CcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccc---------
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPL--------- 418 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l--------- 418 (679)
..|.+.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||+++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 456778999999999999998764 789999998754 467899999999999999984
Q ss_pred ------cccccc-cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcc
Q 005750 419 ------IGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 491 (679)
Q Consensus 419 ------~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIl 491 (679)
++++.. ++..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence 455544 67889999999 99999999853 23679999999999999999999999 99999999999999
Q ss_pred ccCCC--cEEEeeccCccccccCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcc
Q 005750 492 LDINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVE 563 (679)
Q Consensus 492 l~~~~--~~kL~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~ 563 (679)
++.++ .+||+|||++......... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99988 8999999999876543221 112346899999999999999999999999999999999999999743
Q ss_pred cccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 564 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
... ...+......... ......+.... .......+.+++.+||+.||.+|||++||++.|+++.....
T Consensus 272 ~~~-~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPN-TEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTC-HHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcC-HHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 322 2222222222211 11112211110 00112478899999999999999999999999999987644
No 148
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-39 Score=336.54 Aligned_cols=253 Identities=30% Similarity=0.480 Sum_probs=199.3
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc-cceEEEEEEec
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVYEYM 435 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lV~E~~ 435 (679)
..|++.+.||+|+||.||+|..+ |+.||||++.... ..+.+.+|++++++++||||+++++++.+ .+..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 45778899999999999999876 8999999987543 45778999999999999999999998654 45789999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
++++|.+++... ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 98 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999743 12347899999999999999999999 999999999999999999999999999987654332
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... .... .+..+.. .
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~----~~~~~~~-----~---- 233 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----RVEKGYK-----M---- 233 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHH----HHTTTCC-----C----
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHhcCCC-----C----
Confidence 22346889999999988899999999999999999998 99999743322 1111 1111111 1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+...+..+.+++.+||+.||.+|||+.|+++.|+++...+
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 111223457889999999999999999999999999987643
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-39 Score=357.29 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=203.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4667899999999999999987 799999999865321 234678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++|+|.+++. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 97 ~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 97 YVSGGELFDYIC---KNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CCSSEEHHHHTT---SSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999997 35679999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... .+.. .+..+...
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~----~i~~~~~~------- 234 (476)
T 2y94_A 171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFK----KICDGIFY------- 234 (476)
T ss_dssp C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHH----HHHTTCCC-------
T ss_pred c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHH----HHhcCCcC-------
Confidence 2 234468999999999988765 78999999999999999999999743321 1111 11122110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+......+.+++.+||+.||.+|||++|+++
T Consensus 235 ---~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 ---TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 01112246889999999999999999999987
No 150
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-39 Score=344.39 Aligned_cols=263 Identities=26% Similarity=0.409 Sum_probs=211.4
Q ss_pred HHHHhhccccCcCccEEEEEEEEcC------CcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCcccccccccccce
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 427 (679)
...|.+.+.||+|+||.||+|.+.. .+.||+|++.... ....+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4556778999999999999998753 2489999997653 34557799999999999 89999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC
Q 005750 428 RILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 496 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 496 (679)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCC
Confidence 999999999999999987532 13468999999999999999999999 9999999999999999999
Q ss_pred cEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHH
Q 005750 497 RAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHW 574 (679)
Q Consensus 497 ~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~ 574 (679)
.+||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||....... .....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~ 279 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYKL 279 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHHH
Confidence 9999999999875443221 2223446789999999988899999999999999999998 999997433221 11121
Q ss_pred HHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 575 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 575 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
. ..+... ..+...+..+.+++.+||+.||.+|||++||++.|+++....
T Consensus 280 ~----~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 280 V----KDGYQM---------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp H----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H----hcCCCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1 111110 011112347889999999999999999999999999987654
No 151
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.8e-39 Score=349.07 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=196.2
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCC--cchhHHHHHHHHHHHHhcc--CCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 46778999999999999999888999999998653 2345578999999999996 5999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
+.+++|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++ ++.+||+|||++.......
T Consensus 137 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp -CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred -cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 568899999984 4578999999999999999999999 9999999999999995 5899999999998765433
Q ss_pred cc-ccccccCCccccCCcccCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 514 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 514 ~~-~~~~~~gt~~y~aPE~l~~-----------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... . .......+..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~----~~~~~~~~~~ 283 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-Q----ISKLHAIIDP 283 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-H----HHHHHHHHCT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-H----HHHHHHHhCc
Confidence 22 2234569999999999865 4689999999999999999999999973221 1 1111222211
Q ss_pred CCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 582 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 582 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
... ...+......+.+++.+||+.||.+|||++|+++.
T Consensus 284 ~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 NHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccc---------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111 11111113468899999999999999999999864
No 152
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-39 Score=350.49 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=194.3
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHH-HHhccCCCcccccccccccceEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
..|++.+.||+|+||.||+|+.+ +++.||+|++.+... .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 45778899999999999999987 588999999975432 233456677776 5678999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||++||+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999974 4568999999999999999999999 9999999999999999999999999999986433
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .. ...... +.. .
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~---~~~i~~-~~~------~ 257 (373)
T 2r5t_A 192 HNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EM---YDNILN-KPL------Q 257 (373)
T ss_dssp CCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---HH---HHHHHH-SCC------C
T ss_pred CCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HH---HHHHHh-ccc------C
Confidence 221 233456999999999999999999999999999999999999999743221 11 111111 111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 630 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 630 (679)
+ +......+.+++.+||+.||.+||++.+.++.+.
T Consensus 258 ~----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 258 L----KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp C----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred C----CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 1 1112346889999999999999999865444443
No 153
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=344.23 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=201.5
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--------hhHHHHHHHHHHHHhccCCCccccccccccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 425 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 425 (679)
....|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3456778899999999999999875 689999999875421 1334577899999999999999999999999
Q ss_pred ceEEEEEEecCCC-cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeecc
Q 005750 426 HQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 504 (679)
Q Consensus 426 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 504 (679)
+..++||||+.+| +|.+++. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHH---TCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999997 35679999999999999999999999 999999999999999999999999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 583 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 583 (679)
++........ .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ..
T Consensus 176 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~~--- 238 (335)
T 3dls_A 176 SAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------VE--- 238 (335)
T ss_dssp TCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------TT---
T ss_pred cceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------Hh---
Confidence 9987654332 223458999999999988776 88999999999999999999999731110 00
Q ss_pred eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 584 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 584 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
... ..+......+.+++.+||+.||.+|||++|+++.
T Consensus 239 ------~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 ------AAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------TCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------hcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0011123468899999999999999999999875
No 154
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-39 Score=333.21 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=202.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|.++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 86 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence 4667899999999999999876 58999999986532 33457788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc---EEEeeccCcccccc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEE 511 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfgla~~~~~ 511 (679)
+++++|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 87 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 87 VTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999988874 4568999999999999999999999 99999999999999976655 99999999977654
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ..... +..+... ...+
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~----~~~~~~~-~~~~- 229 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQ----IKAGAYD-YPSP- 229 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCC-CCTT-
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHH----HHhcccc-CCch-
Confidence 332 22345899999999999999999999999999999999999999743221 11111 1111111 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
........+.+++.+||+.||.+|||++|+++
T Consensus 230 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 ----EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01122346889999999999999999999987
No 155
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=333.12 Aligned_cols=247 Identities=27% Similarity=0.422 Sum_probs=181.9
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (278)
T 3cok_A 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE 91 (278)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence 4667899999999999999875 799999999864321 224678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++++|.+++... ...+++..++.++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 92 MCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999742 3578999999999999999999999 999999999999999999999999999998764332
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... .... .. +..
T Consensus 167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~-~~------~~~-- 230 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVV-LA------DYE-- 230 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC-SS------CCC--
T ss_pred Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHh-hc------ccC--
Confidence 21 22345899999999999988999999999999999999999999743322110 0000 00 001
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+......+.+++.+||+.||++|||++|+++
T Consensus 231 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 --MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11122346889999999999999999999986
No 156
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=367.06 Aligned_cols=252 Identities=25% Similarity=0.426 Sum_probs=203.0
Q ss_pred ccCcCccEEEEEEEEc---CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCCc
Q 005750 364 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 439 (679)
Q Consensus 364 ~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~gs 439 (679)
.||+|+||.||+|.++ ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 46789999997643 3456789999999999999999999999976 56899999999999
Q ss_pred HhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc--c
Q 005750 440 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI--S 517 (679)
Q Consensus 440 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~--~ 517 (679)
|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......... .
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999743 4569999999999999999999999 999999999999999999999999999998764432211 1
Q ss_pred ccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750 518 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 596 (679)
Q Consensus 518 ~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 596 (679)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+ .+..+... ..
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~---------~~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRM---------EC 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHH----HHHTTCCC---------CC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHH----HHHcCCCC---------CC
Confidence 22235689999999998899999999999999999998 99999743322 1222 22222211 11
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+...+..+.+++.+||+.+|++||++++|++.|+.+.....
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 22334578899999999999999999999999999876543
No 157
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.2e-41 Score=351.65 Aligned_cols=262 Identities=26% Similarity=0.423 Sum_probs=188.4
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHh--ccCCCcccccccccccc----eEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 431 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~l~~~~~~~~----~~~lV 431 (679)
.|.+.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4667899999999999999876 899999998643 34567778888887 68999999999998766 78999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCccccCCCCCCccccCCCcEEEeec
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 503 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 503 (679)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999963 45788889999999999999999 7 99999999999999999999999999
Q ss_pred cCccccccCcccc---cccccCCccccCCcccCCC------CCCchhHHHHHHHHHHHHHhC----------CCCCCccc
Q 005750 504 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 564 (679)
Q Consensus 504 gla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~------~~s~ksDVwSlGvll~elltG----------~~pf~~~~ 564 (679)
|++.......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2233689999999999776 445789999999999999999 66665221
Q ss_pred ccchhhHHHHHHHhHhcCCeeeeecccccCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 565 FGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
... ....+... ....... .+..... ........+.+++.+||+.||.+|||++||++.|+++...+
T Consensus 233 ~~~-~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSD-PSVEEMRK-VVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-C-CCCC-CHH-HHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCC-ccHHHHHH-HHHHhhc----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 110 00000001 1111111 1111100 12256678999999999999999999999999999887754
No 158
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.6e-39 Score=332.98 Aligned_cols=258 Identities=24% Similarity=0.314 Sum_probs=205.7
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc------hhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 456788999999999999999987 689999999865321 1357899999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC----cEEEeecc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 504 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg 504 (679)
++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999973 4578999999999999999999999 9999999999999998877 89999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
++........ .....+++.|+|||++.+..++.++||||||+++|+|++|+.||...... .... . +.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~---~-~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ---ETLT---N-ISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---H-HHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH---HHHH---H-hHhccc
Confidence 9987644322 22345899999999999999999999999999999999999999743321 1111 1 111111
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhhhh
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSIK 634 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~ 634 (679)
. ..+.... .....+.+++.+||+.||.+|||+.|+++ .++.+..
T Consensus 229 ~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 229 D--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp C--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred C--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 0 0000001 12346889999999999999999999997 4565544
No 159
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.3e-39 Score=338.07 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=196.6
Q ss_pred Hhh-ccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEEec
Q 005750 359 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 359 ~~~-~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
|++ .+.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence 445 367999999999999865 6999999999776555667899999999985 7999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc---EEEeeccCccccccC
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 512 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfgla~~~~~~ 512 (679)
++|+|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||++......
T Consensus 94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999974 4568999999999999999999999 99999999999999988776 999999998765322
Q ss_pred cc------cccccccCCccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCcccccch--------hhHHH
Q 005750 513 LT------HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIVH 573 (679)
Q Consensus 513 ~~------~~~~~~~gt~~y~aPE~l~~-----~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~--------~~~~~ 573 (679)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ .....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123458999999999865 4578999999999999999999999975432210 00011
Q ss_pred HHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 574 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 574 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.....+..+... ..+. ... .....+.+++.+||+.||.+|||++|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111122222110 0000 000 12346889999999999999999999987
No 160
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-39 Score=343.25 Aligned_cols=267 Identities=27% Similarity=0.458 Sum_probs=209.5
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccc
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE 424 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 424 (679)
.++....|++.+.||+|+||.||+|++. +++.||||++.... .....++.+|+.++++++||||+++++++..
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 3455667888999999999999999842 47799999997543 3455678999999999999999999999999
Q ss_pred cceEEEEEEecCCCcHhhhhcccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCc
Q 005750 425 EHQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMR 497 (679)
Q Consensus 425 ~~~~~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 497 (679)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++. +..
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcce
Confidence 999999999999999999998643 12458999999999999999999999 99999999999999984 456
Q ss_pred EEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHH
Q 005750 498 AKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWA 575 (679)
Q Consensus 498 ~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~ 575 (679)
+||+|||++........ .......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||..... ....+.
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~- 257 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---QEVLEF- 257 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHHHH-
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---HHHHHH-
Confidence 99999999876433221 12223457889999999988889999999999999999998 9999973322 112221
Q ss_pred HHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 576 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 576 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
+..+... .........+.+++.+||+.||.+||++.||++.|+.+.....
T Consensus 258 ---~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 258 ---VTSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp ---HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---HhcCCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 1121111 1111223478899999999999999999999999998877543
No 161
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.2e-39 Score=334.01 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=204.0
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 34667899999999999999987 58899999986532 345577889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 95 ELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp ECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999998873 4578999999999999999999999 99999999999999999999999999999876433
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .... +..... .+
T Consensus 169 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~-~~~~~~------~~ 234 (294)
T 2rku_A 169 GER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLR-IKKNEY------SI 234 (294)
T ss_dssp TCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHH-HHTTCC------CC
T ss_pred ccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHH-HhhccC------CC
Confidence 222 233458999999999999899999999999999999999999997433211 1111 111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+......+.+++.+||+.||++|||++|+++.
T Consensus 235 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 ----PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11223468899999999999999999999873
No 162
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.9e-39 Score=340.46 Aligned_cols=247 Identities=29% Similarity=0.398 Sum_probs=200.0
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
...|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 345777899999999999999874 79999999986532 23346789999999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+. |+|.+.+... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++.....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 6888877542 4678999999999999999999999 9999999999999999999999999999987543
Q ss_pred CcccccccccCCccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 512 DLTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~---~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||...... ........... ..
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------~~~~~~~~~~~-~~-- 272 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNES-PA-- 272 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSCC-CC--
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhcCC-CC--
Confidence 2 2345899999999983 567899999999999999999999999733221 11111222111 11
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.. .......+.+++.+||+.||.+|||++|+++.
T Consensus 273 ---~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 273 ---LQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---CC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11 11123468899999999999999999999863
No 163
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.7e-39 Score=343.67 Aligned_cols=260 Identities=19% Similarity=0.256 Sum_probs=192.1
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
..|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 35778899999999999999876 789999999975432 234567899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc-----CCCcEEEeeccCccc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-----INMRAKVSDFGLSRQ 508 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kL~Dfgla~~ 508 (679)
|++ |+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||++..
T Consensus 114 ~~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 114 YAE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CCS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred cCC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 997 599999874 4569999999999999999999999 9999999999999994 555699999999987
Q ss_pred cccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC---e
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---V 584 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~ 584 (679)
....... .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||....... .+..... ...... .
T Consensus 187 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~-~~~~~~~~~~ 262 (329)
T 3gbz_A 187 FGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID--QLFKIFE-VLGLPDDTTW 262 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCTTTS
T ss_pred cCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH--HHHHHHH-HhCCCchhhh
Confidence 6433222 2234579999999998774 58999999999999999999999997433221 1111111 111000 0
Q ss_pred eeee--------cccccCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 585 ISIV--------DPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 585 ~~~~--------d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.... .+...... .......+.+++.+||+.||.+|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 00000000 0012346889999999999999999999986
No 164
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=332.54 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=197.7
Q ss_pred ccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCCcH
Q 005750 362 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
...||+|+||.||+|.+. +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 358999999999999875 6889999999876666677899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-CCcEEEeeccCccccccCccccccc
Q 005750 441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSV 519 (679)
Q Consensus 441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfgla~~~~~~~~~~~~~ 519 (679)
.+++........+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++........ ....
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 182 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTET 182 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccc
Confidence 9999865444567899999999999999999999 99999999999999987 89999999999987644322 1233
Q ss_pred ccCCccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCC
Q 005750 520 ARGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 597 (679)
Q Consensus 520 ~~gt~~y~aPE~l~~~--~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 597 (679)
..|++.|+|||++.+. .++.++||||||+++|+|++|+.||........ .... .... .. .+. .+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~---~~~~-~~-----~~~----~~ 248 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFK---VGMF-KV-----HPE----IP 248 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HHHH---HHHH-CC-----CCC----CC
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HHHh---hccc-cc-----ccc----cc
Confidence 4589999999998664 378999999999999999999999963222111 1111 0010 00 111 11
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 598 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 598 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
......+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 223347889999999999999999999975
No 165
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.3e-39 Score=359.19 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=193.9
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 35777899999999999999876 6899999998753 2233456788999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+||+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999874 4578999999999999999999995 279999999999999999999999999999864333
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+ .... ... .
T Consensus 303 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~i~~-~~~------~- 367 (446)
T 4ejn_A 303 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFE---LILM-EEI------R- 367 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------C-
T ss_pred Cc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHH---HHHh-CCC------C-
Confidence 22 223456999999999999999999999999999999999999999743321 1111 1111 111 0
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 627 (679)
.+......+.+++.+||+.||.+|| +++|+++
T Consensus 368 ---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 ---FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1112234688999999999999999 9999986
No 166
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.2e-39 Score=342.97 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=198.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 4677899999999999999987 589999999865432 3356688999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+++++|.+++. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999988866 34579999999999999999999999 9999999999999999999999999999987544322
Q ss_pred cccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH----------hHhcCC
Q 005750 515 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS----------MIKKGD 583 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~----------~~~~~~ 583 (679)
. .....|++.|+|||++.+. .++.++|||||||++|+|++|+.||........ ....... ......
T Consensus 180 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 V-YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred c-cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcc
Confidence 2 2334589999999998775 789999999999999999999999974432211 1111100 000000
Q ss_pred -eeeeecccccCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 584 -VISIVDPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 584 -~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
......+...... .......+.+++.+||+.||.+|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000001111111 1123457899999999999999999999986
No 167
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-39 Score=350.89 Aligned_cols=264 Identities=25% Similarity=0.335 Sum_probs=192.0
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhcc-CCCccccccccccc--ce
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEE--HQ 427 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~--~~ 427 (679)
.....|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34456778899999999999999876 6899999998653 2345567889999999997 99999999998644 37
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.|+||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999997 689998873 468999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCc--------------------ccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCccccc
Q 005750 508 QAEEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 566 (679)
Q Consensus 508 ~~~~~~--------------------~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~ 566 (679)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 653211 111233468999999999876 67899999999999999999999999754432
Q ss_pred chhhHHHHHHHhHhcCCeeee---ec-----------------ccccCCC-------------CHHHHHHHHHHHHHhcc
Q 005750 567 AELNIVHWARSMIKKGDVISI---VD-----------------PVLIGNV-------------KIESIWRIAEVAIQCVE 613 (679)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~---~d-----------------~~l~~~~-------------~~~~~~~l~~li~~cl~ 613 (679)
.. ...+...+.......+ .. ....... .......+.+++.+||+
T Consensus 238 ~~---~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 238 NQ---LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp HH---HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred HH---HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 21 1111111110000000 00 0000000 00123468899999999
Q ss_pred cCCCCCCCHHHHHHH
Q 005750 614 QRGFSRPKMQEIVLA 628 (679)
Q Consensus 614 ~dP~~RPt~~evl~~ 628 (679)
.||.+|||++|+++.
T Consensus 315 ~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 315 FNPNKRISANDALKH 329 (388)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred cCcccCCCHHHHhCC
Confidence 999999999999875
No 168
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.1e-39 Score=339.16 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=203.2
Q ss_pred hHHHHHHHhhc-cccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 352 PELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 352 ~~l~~~~~~~~-~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
.+.....|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++.+.+
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445566665 88999999999999887 69999999987543 23357889999999999 5799999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeec
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDF 503 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Df 503 (679)
..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred eEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 999999999999999998643 34679999999999999999999999 99999999999999987 789999999
Q ss_pred cCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC
Q 005750 504 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 583 (679)
Q Consensus 504 gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 583 (679)
|++........ .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.... ...+. ...
T Consensus 179 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~----~~~ 249 (327)
T 3lm5_A 179 GMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET---YLNIS----QVN 249 (327)
T ss_dssp GGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHH----HTC
T ss_pred ccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHHH----hcc
Confidence 99987654322 2234589999999999999999999999999999999999999974332211 11111 111
Q ss_pred eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 584 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 584 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
. .............+.+++.+||+.||.+|||++|+++.
T Consensus 250 ~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 V------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp C------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 00011112233468899999999999999999999863
No 169
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-39 Score=333.26 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=202.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccc--cccceEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRILVY 432 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~--~~~~~~~lV~ 432 (679)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++ ......++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 4667899999999999999886 68999999997542 34557799999999999999999999987 4467899999
Q ss_pred EecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----ccccCCCCCCccccCCCcEEEeeccCc
Q 005750 433 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLS 506 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kL~Dfgla 506 (679)
||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999997543 34569999999999999999999999 77 999999999999999999999999999
Q ss_pred cccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
......... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..+.+ .+..+....
T Consensus 164 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 164 RILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAG----KIREGKFRR 235 (279)
T ss_dssp HHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCCCC
T ss_pred eeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHH----HHhhccccc
Confidence 876443221 2234589999999999998999999999999999999999999974322 11111 222222211
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 630 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 630 (679)
.+......+.+++.+||+.||.+|||++||++.+.
T Consensus 236 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 ---------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ---------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 11122347889999999999999999999988554
No 170
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3e-39 Score=345.99 Aligned_cols=266 Identities=21% Similarity=0.300 Sum_probs=204.4
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
+....|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 34456777899999999999999887 68999999997653 34457799999999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 110 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp ECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999974 3568999999999999999999998 5 89999999999999999999999999987653
Q ss_pred cCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH-H--------hHh-
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR-S--------MIK- 580 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~-~--------~~~- 580 (679)
... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+............ . ...
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred ccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 321 223468999999999999999999999999999999999999997433221110000000 0 000
Q ss_pred -------------cCCeeeeec----ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 581 -------------KGDVISIVD----PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 581 -------------~~~~~~~~d----~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.....+.++ ..............+.+++.+||+.||.+|||++|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000 000000011123468899999999999999999999864
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-38 Score=352.00 Aligned_cols=260 Identities=22% Similarity=0.290 Sum_probs=193.7
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCccccccccccc------ceE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~~ 428 (679)
.|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.+++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 4677899999999999999876 6899999999754 234457788999999999999999999998554 467
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999975 5666664 248999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhh-HHHH-------------
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN-IVHW------------- 574 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~-~~~~------------- 574 (679)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+... +.+.
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 65432 2234568999999999999999999999999999999999999998544322111 1000
Q ss_pred --HHHhHhcCC-e-----eeeecccccCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 575 --ARSMIKKGD-V-----ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 575 --~~~~~~~~~-~-----~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
......... . ...+...+.... .......+.+|+.+||+.||.+|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0 000000000000 01124578999999999999999999999863
No 172
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.9e-39 Score=333.74 Aligned_cols=247 Identities=29% Similarity=0.432 Sum_probs=204.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3667899999999999999875 68999999987543 345678999999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
++++|.+++. ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 103 ~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 103 GGGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp TTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999986 3568999999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 595 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 595 (679)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ..... +..+.. +.+...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~~~~ 242 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLFL----IPKNNP-----PTLEGN 242 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSCC-----CCCCSS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHHH----hhcCCC-----CCCccc
Confidence 123345899999999999999999999999999999999999999733221 11111 111111 111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
....+.+++.+||+.||.+|||+.|+++.
T Consensus 243 ----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 ----YSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 23468899999999999999999999874
No 173
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.7e-39 Score=368.82 Aligned_cols=249 Identities=27% Similarity=0.464 Sum_probs=200.3
Q ss_pred cccCcCccEEEEEEEEc---CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCC
Q 005750 363 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 437 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~ 437 (679)
++||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999664 468899999976432 345789999999999999999999999965 458899999999
Q ss_pred CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc--c
Q 005750 438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT--H 515 (679)
Q Consensus 438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~--~ 515 (679)
|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 5679999999999999999999999 9999999999999999999999999999987654322 1
Q ss_pred ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750 516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 594 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 594 (679)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.... ...+ .+..+...
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~--------- 591 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERM--------- 591 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCC---------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC---------
Confidence 1223346788999999999899999999999999999998 99999743321 1111 22222211
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750 595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 634 (679)
Q Consensus 595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 634 (679)
..+...+..+.+++.+||+.||++||++++|++.|+++..
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1122334578899999999999999999999999998754
No 174
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=346.28 Aligned_cols=253 Identities=26% Similarity=0.353 Sum_probs=203.1
Q ss_pred HHHhhccccCcCccEEEEEEEE----cCCcEEEEEEecCCc----chhHHHHHHHHHHHHhc-cCCCcccccccccccce
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 427 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~ 427 (679)
..|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4577889999999999999987 368999999986532 22345677899999999 69999999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999974 3568999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCcccccccccCCccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
..............||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~--- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE--- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC---
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC---
Confidence 765444433445569999999999985 3578999999999999999999999974333221 112222222111
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 628 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 628 (679)
+ ..+......+.+++.+||+.||.+|| +++|+++.
T Consensus 283 ----~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ----P----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----C----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----C----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1 11122234688999999999999999 99999864
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.4e-39 Score=333.64 Aligned_cols=245 Identities=24% Similarity=0.364 Sum_probs=202.5
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 45677899999999999999886 58899999986432 122467889999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++|+|.+++.. ...+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999974 3568999999999999999999999 99999999999999999999999999998765432
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... . ... +..... .
T Consensus 168 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~-~~~~~~------~- 230 (284)
T 2vgo_A 168 R---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE---T---HRR-IVNVDL------K- 230 (284)
T ss_dssp C---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HHH-HHTTCC------C-
T ss_pred c---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH---H---HHH-Hhcccc------C-
Confidence 2 233458999999999999999999999999999999999999997432211 1 111 111111 1
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+......+.+++.+||+.||.+|||++|+++
T Consensus 231 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 ---FPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 11122346889999999999999999999986
No 176
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-38 Score=329.95 Aligned_cols=245 Identities=29% Similarity=0.436 Sum_probs=196.5
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccc----cceEEEE
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 431 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lV 431 (679)
|.+.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 456788999999999999876 6889999998653 23456778999999999999999999998754 4568999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCcccc-CCCcEEEeeccCccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQ 508 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kL~Dfgla~~ 508 (679)
|||+++|+|.+++.. ...+++..++.++.|++.||.|||+ .+ |+||||||+||+++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999974 3568999999999999999999998 78 99999999999997 789999999999976
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
..... .....|++.|+|||++.+ .++.++|||||||++|+|++|+.||...... ..... ....+......
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~----~~~~~~~~~~~ 251 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYR----RVTSGVKPASF 251 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHH----HHTTTCCCGGG
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--HHHHH----HHhccCCcccc
Confidence 44332 223458999999998875 5899999999999999999999999732221 11111 11111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+. .....+.+++.+||+.||.+|||++|+++
T Consensus 252 ~~--------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DK--------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GG--------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC--------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 11236889999999999999999999986
No 177
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.9e-39 Score=332.13 Aligned_cols=246 Identities=20% Similarity=0.287 Sum_probs=199.9
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 430 (679)
....|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467788999999999999999987 7999999998754 234557788999999999 99999999999999999999
Q ss_pred EEEecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC--------------
Q 005750 431 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------- 495 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-------------- 495 (679)
||||+++++|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997542 23668999999999999999999999 999999999999999844
Q ss_pred -----CcEEEeeccCccccccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchh
Q 005750 496 -----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 569 (679)
Q Consensus 496 -----~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~ 569 (679)
..+||+|||.+....... ...|++.|+|||.+.+. .+++++|||||||++|+|++|.+|+...+
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----- 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----- 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence 479999999998765432 23489999999999776 66789999999999999999998775221
Q ss_pred hHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 570 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... .+..+.... + +......+.+++.+||+.||.+|||++|+++
T Consensus 236 ~~~-----~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QWH-----EIRQGRLPR-----I----PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHH-----HHHTTCCCC-----C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH-----HHHcCCCCC-----C----CcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 112222111 1 1122346889999999999999999999976
No 178
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.3e-38 Score=346.11 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=188.7
Q ss_pred cccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccc----cceEEEEEEecC
Q 005750 363 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE----EHQRILVYEYMH 436 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~~~~~lV~E~~~ 436 (679)
+.||+|+||.||+|.++ +++.||||++... ..+.+|++++.++ +||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999876 6899999998643 4567888887554 89999999998865 667899999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCccccccCc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~~~~~~~ 513 (679)
+|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999853 23569999999999999999999999 99999999999999987 7899999999998654322
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch-hhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...... +..+... ...+
T Consensus 219 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----i~~~~~~-~~~~-- 289 (400)
T 1nxk_A 219 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYE-FPNP-- 289 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH----HHHTCCC-CCTT--
T ss_pred c--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH----HHcCccc-CCCc--
Confidence 1 2344689999999999999999999999999999999999999974432211 111111 1111111 0000
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
........+.+++.+||+.||.+|||++|+++.
T Consensus 290 ---~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 ---EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011223468899999999999999999999874
No 179
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.2e-39 Score=340.26 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=203.9
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
..|.+.+.||+|+||.||++.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45667899999999999999887 5889999998653 2345577899999999999999999999999999999999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 121 e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 121 ELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp CCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999998873 4578999999999999999999999 99999999999999999999999999999876433
Q ss_pred cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||....... . ... +..... .+
T Consensus 195 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~-~~~~~~------~~ 260 (335)
T 2owb_A 195 GER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---T---YLR-IKKNEY------SI 260 (335)
T ss_dssp TCC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HHH-HHHTCC------CC
T ss_pred ccc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH---H---HHH-HhcCCC------CC
Confidence 221 233458999999999998889999999999999999999999997432211 1 111 111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. .....+.+++.+||+.||.+|||++|+++
T Consensus 261 ~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 261 PK----HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred Cc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 12246789999999999999999999986
No 180
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.2e-39 Score=359.65 Aligned_cols=250 Identities=26% Similarity=0.320 Sum_probs=204.3
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++.+.. ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE 264 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 264 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEE
Confidence 3556789999999999999886 69999999986532 2234668899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|++||+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 265 y~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 265 LMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred cCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999998753 23459999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch-hhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+... +.....
T Consensus 341 ~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~----i~~~~~-------- 406 (576)
T 2acx_A 341 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL----VKEVPE-------- 406 (576)
T ss_dssp C--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH----HHHCCC--------
T ss_pred c--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH----hhcccc--------
Confidence 2 2234699999999999999999999999999999999999999985433211 112221 111110
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 627 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 627 (679)
.++......+.+++.+||+.||.+|| +++||++
T Consensus 407 --~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 --EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred --cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11112234788999999999999999 7888875
No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-38 Score=351.88 Aligned_cols=192 Identities=26% Similarity=0.393 Sum_probs=154.0
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCccccccccc-----ccceE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE-----EEHQR 428 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~~~ 428 (679)
..|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++|++++||||+++++++. .....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 35778899999999999999876 68999999986532 344577899999999999999999999984 34578
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
|+||||+ +|+|.+++. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999998 579999987 35679999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCcc--------------------------cccccccCCccccCCccc-CCCCCCchhHHHHHHHHHHHHHh
Q 005750 509 AEEDLT--------------------------HISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELIS 555 (679)
Q Consensus 509 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~l-~~~~~s~ksDVwSlGvll~ellt 555 (679)
...... .......||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 643211 112334689999999976 56679999999999999999999
No 182
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=344.65 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=194.0
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch-hHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.|.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence 3567889999999999999987 7899999998654322 1224567999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
+ |+|.+++... ...+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++.........
T Consensus 83 ~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 83 D-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp S-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred c-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 7 5898888753 4568999999999999999999999 99999999999999999999999999999865433222
Q ss_pred ccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcC---Ceeeeec--
Q 005750 516 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISIVD-- 589 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-- 589 (679)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+..... ....+....... .......
T Consensus 157 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 157 -YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred -cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcch
Confidence 223457999999999876 578999999999999999999999997543322 122222211110 0000000
Q ss_pred -------ccccCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 590 -------PVLIGN----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 590 -------~~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+..... ........+.+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00112346789999999999999999999987
No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-38 Score=328.20 Aligned_cols=246 Identities=24% Similarity=0.392 Sum_probs=194.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.|.+.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4667899999999999999987 79999999986432 1234678899999999999999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999974 3568999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 592 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 592 (679)
. .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ...+ .+..+.. ..
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~------~~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFK----KIRGGVF------YI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HHHH----HhhcCcc------cC
Confidence 2 223458899999999988765 68999999999999999999999743221 1111 1111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+......+.+++.+||+.||.+|||++|+++.
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11123468899999999999999999999873
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.2e-38 Score=340.18 Aligned_cols=266 Identities=20% Similarity=0.257 Sum_probs=198.4
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccc--------c
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------E 425 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--------~ 425 (679)
..|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 35778899999999999999985 789999999865432 234678899999999999999999999876 4
Q ss_pred ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccC
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 505 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgl 505 (679)
+..++||||+++ +|.+.+... ...+++..++.++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999975 777777643 3569999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccCc---ccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 506 SRQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 506 a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
+....... ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....................
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98754322 112233458999999999876 46899999999999999999999999854332221111111110000
Q ss_pred CCeeee-----ecc---cccCCCCH-HH------HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 582 GDVISI-----VDP---VLIGNVKI-ES------IWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 582 ~~~~~~-----~d~---~l~~~~~~-~~------~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
...... .+. ........ .. ...+.+++.+||+.||.+|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 000 00000000 00 2357899999999999999999999873
No 185
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=339.56 Aligned_cols=263 Identities=20% Similarity=0.208 Sum_probs=197.4
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch-----hHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
...|++.+.||+|+||.||+|.+. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 356778899999999999999986 5899999998753221 1246789999999999999999999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||+++ +|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 89 lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 99999975 888888742 4568889999999999999999999 99999999999999999999999999999876
Q ss_pred ccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC---ee
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VI 585 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~ 585 (679)
..... ......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+..... .+..... ...... ..
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~--~~~~i~~-~~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD--QLTRIFE-TLGTPTEEQWP 238 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCTTTSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHH-HcCCCChhhhh
Confidence 54322 22334589999999998654 58999999999999999999999997433211 1111111 111100 00
Q ss_pred ------eeecccccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 586 ------SIVDPVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 586 ------~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+.+........+ ......+.+++.+||+.||.+|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000001 1223578999999999999999999999874
No 186
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.4e-39 Score=332.91 Aligned_cols=259 Identities=28% Similarity=0.408 Sum_probs=198.3
Q ss_pred HHHHhhccccCcCccEEEEEEEEc--CCc--EEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
...|++.+.||+|+||.||+|++. +++ .||+|+++.. .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 346778899999999999999864 233 6899998754 2345678999999999999999999999998765 7
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 8999999999999999753 3568999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 509 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 509 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
....... ......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .. ...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~---~~~~~~~~~~~ 244 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QI---LHKIDKEGERL 244 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HH---HHHHHTSCCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH---HH---HHHHHccCCCC
Confidence 6543321 1223447788999999988889999999999999999999 99999743221 11 11222211110
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 635 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 635 (679)
.........+.+++.+||+.||.+|||++++++.|+++...
T Consensus 245 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 ---------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 01112335788999999999999999999999999987764
No 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.9e-39 Score=349.15 Aligned_cols=254 Identities=25% Similarity=0.355 Sum_probs=193.2
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--------chhHHHHHHHHHHHHhccCCCccccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 423 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 423 (679)
......|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 445567888999999999999999876 68999999986432 112235789999999999999999999986
Q ss_pred ccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC---CcEEE
Q 005750 424 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKV 500 (679)
Q Consensus 424 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL 500 (679)
.+ ..++||||+++|+|.+++. ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.+ ..+||
T Consensus 211 ~~-~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AE-DYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SS-EEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cC-ceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 54 5799999999999999887 35679999999999999999999999 999999999999999754 45999
Q ss_pred eeccCccccccCcccccccccCCccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 005750 501 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 501 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 577 (679)
+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .+.+.
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~--- 356 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ--- 356 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHH---
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHH---
Confidence 9999998765432 2234568999999999853 578899999999999999999999997432221 11111
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+..+..... +.... .....+.+++.+||+.||.+|||++|+++
T Consensus 357 -i~~~~~~~~--~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 -ITSGKYNFI--PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -HHTTCCCCC--HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -HhcCCCCCC--chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111111100 00001 12346889999999999999999999986
No 188
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.4e-39 Score=333.48 Aligned_cols=251 Identities=20% Similarity=0.352 Sum_probs=198.2
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
..|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 34677899999999999999987 58999999997665566788999999999999999999999999999999999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 515 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~ 515 (679)
++++|.+++... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 172 (302)
T 2j7t_A 99 PGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ- 172 (302)
T ss_dssp TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-
Confidence 999999988642 4568999999999999999999999 9999999999999999999999999998764322111
Q ss_pred ccccccCCccccCCccc-----CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 516 ISSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 516 ~~~~~~gt~~y~aPE~l-----~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
......|++.|+|||++ .+..++.++||||||+++|+|++|+.||...+.. ......... ......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~-- 243 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKS-DPPTLL-- 243 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHS-CCCCCS--
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhcc-CCcccC--
Confidence 11234589999999998 4677899999999999999999999999743221 111111111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+......+.+++.+||+.||.+|||+.|+++
T Consensus 244 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 -----TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11122346889999999999999999999875
No 189
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=342.77 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=195.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccc------eE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 428 (679)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 4677899999999999999885 69999999986532 334567899999999999999999999987653 46
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ +||+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999873 468999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC----
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 583 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 583 (679)
.... .....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..... ..+........
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL---KEIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhcCCCCHHHH
Confidence 5443 223458999999999876 67899999999999999999999999854432111 11111000000
Q ss_pred --------------eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhh
Q 005750 584 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDS 632 (679)
Q Consensus 584 --------------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~ 632 (679)
........+ ..........+.+++.+||+.||.+|||++|+++. +++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000000 01111223468899999999999999999999873 5443
No 190
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=339.33 Aligned_cols=253 Identities=16% Similarity=0.165 Sum_probs=204.8
Q ss_pred HHHHhhccccCcCccEEEEEEE------EcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc---CCCcccccccccccc
Q 005750 356 EATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEH 426 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~ 426 (679)
...|.+.+.||+|+||.||+|. ..+++.||||++.... ...+.+|+++++.++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3456778999999999999994 3468999999997543 456777888888876 999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC----------
Q 005750 427 QRILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---------- 494 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---------- 494 (679)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 9999999999999999997432 35679999999999999999999999 99999999999999988
Q ss_pred -CCcEEEeeccCccccccC-cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHH
Q 005750 495 -NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 572 (679)
Q Consensus 495 -~~~~kL~Dfgla~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~ 572 (679)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 899999999999764321 1222344569999999999999999999999999999999999999996322110
Q ss_pred HHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHhhhhh
Q 005750 573 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKI 635 (679)
Q Consensus 573 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~~~~~ 635 (679)
..+...+.... ....+.+++..|++.+|.+| |+++++.+.|++....
T Consensus 293 -------------~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 -------------CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------------EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------------eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 01111111111 23467789999999999998 5889999999988775
No 191
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=332.08 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=199.9
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
+.....|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 334556778899999999999999887 58999999987542 346788999999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 103 MEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred eecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999999863 24678999999999999999999999 9999999999999999999999999999987654
Q ss_pred CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750 512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 591 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 591 (679)
.... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .. .. .........
T Consensus 178 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---~~-~~~~~~~~~---- 245 (314)
T 3com_A 178 TMAK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---AI---FM-IPTNPPPTF---- 245 (314)
T ss_dssp TBSC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH---HH-HHHSCCCCC----
T ss_pred hccc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---HH---HH-HhcCCCccc----
Confidence 3222 233458999999999999899999999999999999999999997332211 11 11 111111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..+......+.+++.+||+.||.+|||+.|+++
T Consensus 246 ---~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ---RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011122347889999999999999999999986
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-38 Score=354.78 Aligned_cols=252 Identities=27% Similarity=0.368 Sum_probs=203.2
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
....|++.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3567889999999999999999986 78999999986432 23457789999999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc---CCCcEEEeeccCccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQ 508 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfgla~~ 508 (679)
|||+.+|+|.+.+.. ...+++..++.++.||+.||.|||+ ++|+||||||+|||++ .++.+||+|||++..
T Consensus 100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999998874 4579999999999999999999999 9999999999999995 466799999999987
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .... . +..+......
T Consensus 174 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~---~-i~~~~~~~~~ 243 (486)
T 3mwu_A 174 FQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILK---R-VETGKYAFDL 243 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHTCCCSCS
T ss_pred CCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCCCCCCC
Confidence 654322 233468999999999976 5899999999999999999999999743221 1111 1 1122111100
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+ ........+.+++.+||+.||.+|||+.|+++.
T Consensus 244 -~-----~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 -P-----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -G-----GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -c-----ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 011223468899999999999999999999874
No 193
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.3e-38 Score=331.86 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=198.7
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccc--cceEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 432 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~--~~~~~lV~ 432 (679)
..|++.+.||+|+||.||+|+.. +++.||+|++... ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 45778899999999999999875 7899999998743 3467889999999997 9999999999987 66789999
Q ss_pred EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC-cEEEeeccCcccccc
Q 005750 433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 511 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfgla~~~~~ 511 (679)
||+++++|.+++. .+++..++.++.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||++.....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999875 37899999999999999999999 9999999999999999766 899999999987654
Q ss_pred CcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH--------HhHhcC
Q 005750 512 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 582 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~--------~~~~~~ 582 (679)
... .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ...+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence 322 233458999999999877 67899999999999999999999999632221 111111111 001100
Q ss_pred Ce--------------eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 583 DV--------------ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 583 ~~--------------~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ....+..............+.+++.+||+.||.+|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000001111111223457899999999999999999999987
No 194
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.6e-38 Score=355.19 Aligned_cols=257 Identities=27% Similarity=0.405 Sum_probs=202.3
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 431 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV 431 (679)
....|++.+.||+|+||+||+|+.+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567888999999999999999987 68999999987543 23457789999999999999999999999999999999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 508 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~~ 508 (679)
|||+++|+|.+.+.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||++..
T Consensus 115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999998873 4568999999999999999999999 99999999999999976 45599999999987
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+.. . +..+....
T Consensus 189 ~~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~---~-i~~~~~~~-- 256 (494)
T 3lij_A 189 FENQKK--MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILR---K-VEKGKYTF-- 256 (494)
T ss_dssp CBTTBC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHTCCCC--
T ss_pred CCCCcc--ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCCCCC--
Confidence 654322 233468999999999874 6899999999999999999999999743321 1111 1 11121110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDSI 633 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 633 (679)
+...... ....+.+++.+||+.||.+|||++|+++. +++..
T Consensus 257 ~~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 257 DSPEWKN----VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299 (494)
T ss_dssp CSGGGTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred Cchhccc----CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence 0111111 23468899999999999999999999863 55543
No 195
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1e-38 Score=330.60 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=186.7
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-h-hHHHHHHHHHHHHhccCCCcccccccccccceEEEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-H-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~ 432 (679)
...|++.+.||+|+||.||+|... +|+.||+|++..... . ..+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 345677899999999999999875 789999999975432 2 2233445555678889999999999999999999999
Q ss_pred EecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 433 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 433 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||++ |+|.+++.... ....+++..++.++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 58877775422 45679999999999999999999998 7 99999999999999999999999999998765
Q ss_pred cCcccccccccCCccccCCccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 511 EDLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l----~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
.... .....|++.|+|||++ .+..++.++|||||||++|+|++|+.||...... ...+ ......... .
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~----~~~~~~~~~-~ 233 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQL----KQVVEEPSP-Q 233 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHHH----HHHHHSCCC-C
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-HHHH----HHHhccCCC-C
Confidence 4322 2233589999999996 5667899999999999999999999999732221 1111 111221111 0
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
. ........+.+++.+||+.||.+|||++|+++
T Consensus 234 ~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 L--------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C--------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 01122346889999999999999999999987
No 196
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.6e-38 Score=354.21 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=202.9
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
|++.+.||+|+||.||+|+.+ +|+.||+|++.+... ...+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 444678999999999999986 699999999965321 2346788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 435 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 435 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
++||+|.+++.... ....+++..++.++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999987543 24579999999999999999999999 999999999999999999999999999998765433
Q ss_pred ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750 514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 593 (679)
Q Consensus 514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 593 (679)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+....... ...
T Consensus 344 ~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~-~~~--------- 410 (543)
T 3c4z_A 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLE-QAV--------- 410 (543)
T ss_dssp CC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHH-CCC---------
T ss_pred cc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhh-ccc---------
Confidence 22 2334699999999999999999999999999999999999999974432211 1111111111 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 005750 594 GNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 627 (679)
Q Consensus 594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 627 (679)
.++......+.+++.+||+.||.+||++ +||++
T Consensus 411 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 -TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1112223468899999999999999975 55553
No 197
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7e-38 Score=347.15 Aligned_cols=262 Identities=21% Similarity=0.291 Sum_probs=207.3
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccC-CCcccccccccccceEEEEEEec
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM 435 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lV~E~~ 435 (679)
.|++.++||+|+||.||+|++. +++.||||++..... ..++.+|+++++.++| +++..+..++...+..++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4667899999999999999874 699999998765432 2457889999999976 55566666667788889999999
Q ss_pred CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCccccccC
Q 005750 436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla~~~~~~ 512 (679)
+++|.+++... ...+++..++.|+.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999999742 4579999999999999999999999 999999999999999 68899999999999876544
Q ss_pred cccc------cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 513 LTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 513 ~~~~------~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 3221 2245689999999999999999999999999999999999999985444332222222221111111111
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
+...+ +.++.+++.+||+.+|++||++++|++.|+++....
T Consensus 240 -----l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 -----LCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----HHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 00111 347889999999999999999999999999987643
No 198
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.7e-39 Score=356.01 Aligned_cols=253 Identities=27% Similarity=0.383 Sum_probs=206.4
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 429 (679)
+....|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34567888999999999999999987 79999999986532 334678999999999999999999999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc---cCCCcEEEeeccCc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLS 506 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfgla 506 (679)
+||||+.+|+|.+++. ....+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||++
T Consensus 103 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 103 LVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEECCCCSCBHHHHHH---TCSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEecCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999999987 35679999999999999999999999 999999999999999 56789999999999
Q ss_pred cccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (679)
........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ..... +..+....
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~----i~~~~~~~ 246 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKK----VEKGKYTF 246 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHCCCCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHH----HHcCCCCC
Confidence 87654322 233458999999999876 6899999999999999999999999743321 11111 12222110
Q ss_pred eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.. + ........+.+++.+||+.+|.+|||+.|+++.
T Consensus 247 ~~-~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 EL-P-----QWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CS-G-----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CC-c-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 0 011223468899999999999999999999863
No 199
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.7e-38 Score=344.05 Aligned_cols=267 Identities=21% Similarity=0.268 Sum_probs=205.1
Q ss_pred hhHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc--------CCCccccccc
Q 005750 351 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLIGY 421 (679)
Q Consensus 351 ~~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------hpnIv~l~~~ 421 (679)
..++....|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.++ |+||++++++
T Consensus 31 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 34444567888999999999999999875 6899999999754 344577889999999995 7889999999
Q ss_pred cc----ccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCC
Q 005750 422 CE----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINM 496 (679)
Q Consensus 422 ~~----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~ 496 (679)
+. .....++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+ + ||+||||||+|||++.++
T Consensus 110 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 110 FKISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCH
T ss_pred eeecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccc
Confidence 87 567899999999 56666666533 23569999999999999999999999 7 999999999999998775
Q ss_pred -------------------------------------------------cEEEeeccCccccccCcccccccccCCcccc
Q 005750 497 -------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGYL 527 (679)
Q Consensus 497 -------------------------------------------------~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~ 527 (679)
.+||+|||++....... ....||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~ 260 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGC
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCccc
Confidence 79999999998765432 2345899999
Q ss_pred CCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch---hhHHHHHHHhHhc--------CCe-eeeecc-----
Q 005750 528 DPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMIKK--------GDV-ISIVDP----- 590 (679)
Q Consensus 528 aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~---~~~~~~~~~~~~~--------~~~-~~~~d~----- 590 (679)
|||++.+..++.++|||||||++|+|++|+.||........ ......+...... +.. ...+..
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK 340 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence 99999998999999999999999999999999975443221 1111111111111 000 000000
Q ss_pred -----cc---------cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 591 -----VL---------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 591 -----~l---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ...........+.+|+.+||+.||++|||++|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 01234566778999999999999999999999986
No 200
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=327.17 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=196.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc----chhHHHHHHHHHHHHhccCCCcccccccc--cccceEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRIL 430 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~l~~~~--~~~~~~~l 430 (679)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++ .+.+..++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 4667899999999999999875 68999999987532 23457799999999999999999999998 45568899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||++++ |.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 99999876 76766643 35679999999999999999999999 999999999999999999999999999998754
Q ss_pred cCc-ccccccccCCccccCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 511 EDL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 511 ~~~-~~~~~~~~gt~~y~aPE~l~~~~--~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
... ........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||...... ...+ .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~i~~~~~--- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---KLFE----NIGKGSY--- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHCCC---
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHH----HHhcCCC---
Confidence 322 12223445899999999987644 478999999999999999999999743221 1111 1112211
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.+ +......+.+++.+||+.||.+|||++|+++.
T Consensus 231 ---~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ---AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 11223468899999999999999999999864
No 201
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.1e-38 Score=345.00 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=165.9
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCccccccccccc-----ceEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 429 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~ 429 (679)
.|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... +..|
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 5677899999999999999876 58899999997542 34457889999999999999999999998765 5789
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||+. |+|.+++. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK---TPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999985 69999997 35679999999999999999999999 99999999999999999999999999999876
Q ss_pred ccCccc---------------------ccccccCCccccCCccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005750 510 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 561 (679)
Q Consensus 510 ~~~~~~---------------------~~~~~~gt~~y~aPE~l-~~~~~s~ksDVwSlGvll~elltG~~pf~ 561 (679)
...... ......||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 443211 12345689999999985 56679999999999999999998655543
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-39 Score=351.41 Aligned_cols=247 Identities=16% Similarity=0.145 Sum_probs=188.9
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC---cchhHHHHHHHHH---HHHhccCCCccccc-------cccc
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVA---LLSRIHHRNLVPLI-------GYCE 423 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~hpnIv~l~-------~~~~ 423 (679)
.|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++ ++++++||||++++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 4566789999999999999974 6999999998632 3345678999995 45555799999998 4444
Q ss_pred ccc-----------------eEEEEEEecCCCcHhhhhcccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 005750 424 EEH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIH 482 (679)
Q Consensus 424 ~~~-----------------~~~lV~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH 482 (679)
+.+ ..++||||+ +|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 332 378999999 689999997532 12234568888999999999999999 99999
Q ss_pred cCCCCCCccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCC-----------CCCchhHHHHHHHHHH
Q 005750 483 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLL 551 (679)
Q Consensus 483 ~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~s~ksDVwSlGvll~ 551 (679)
|||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 99999999999999999999999986433 2233457 999999999877 8999999999999999
Q ss_pred HHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HH
Q 005750 552 ELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AI 629 (679)
Q Consensus 552 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L 629 (679)
||++|+.||......... ..+.. . ... ....+.+++.+||+.||.+|||+.|+++ .+
T Consensus 305 elltg~~Pf~~~~~~~~~---------------~~~~~-~-~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 305 WIWCADLPITKDAALGGS---------------EWIFR-S-CKN----IPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp HHHHSSCCC------CCS---------------GGGGS-S-CCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred HHHHCCCCCcccccccch---------------hhhhh-h-ccC----CCHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 999999999733221100 00000 0 011 2346889999999999999999999986 45
Q ss_pred Hhhhh
Q 005750 630 QDSIK 634 (679)
Q Consensus 630 ~~~~~ 634 (679)
+++..
T Consensus 364 ~~~~~ 368 (377)
T 3byv_A 364 EQLRT 368 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 203
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.6e-38 Score=331.48 Aligned_cols=254 Identities=25% Similarity=0.342 Sum_probs=198.6
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--------hhHHHHHHHHHHHHhccCCCccccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 423 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 423 (679)
......|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 445678889999999999999999876 589999999865321 12345889999999999999999999987
Q ss_pred ccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc---EEE
Q 005750 424 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKV 500 (679)
Q Consensus 424 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kL 500 (679)
.++ .++||||+++++|.+++. ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++. +||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred CCc-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 665 899999999999999887 35679999999999999999999999 99999999999999987654 999
Q ss_pred eeccCccccccCcccccccccCCccccCCccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 005750 501 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 577 (679)
Q Consensus 501 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 577 (679)
+|||++........ .....|++.|+|||++ ....++.++|||||||++|+|++|+.||....... .+...+
T Consensus 159 ~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~-- 232 (322)
T 2ycf_A 159 TDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI-- 232 (322)
T ss_dssp CCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHH--
T ss_pred ccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHH--
Confidence 99999987654321 2234589999999996 35678999999999999999999999997433221 121211
Q ss_pred hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..+.... .+.... .....+.+++.+||+.||.+|||++|+++
T Consensus 233 --~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 --TSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --HHTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HhCcccc--Cchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111110 000111 12346889999999999999999999984
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7e-38 Score=336.19 Aligned_cols=250 Identities=26% Similarity=0.364 Sum_probs=200.6
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--------hhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 426 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~ 426 (679)
..|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45666789999999999999986 799999999865431 1245678999999999 7999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 506 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla 506 (679)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999973 4579999999999999999999999 99999999999999999999999999999
Q ss_pred cccccCcccccccccCCccccCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHh
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 580 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 580 (679)
........ .....||+.|+|||++. ...++.++|||||||++|+|++|+.||...... ..... +.
T Consensus 248 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~----i~ 318 (365)
T 2y7j_A 248 CHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLRM----IM 318 (365)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HH
T ss_pred cccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHHH----HH
Confidence 87654322 23356899999999885 336889999999999999999999999733211 11111 11
Q ss_pred cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 581 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 581 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+.... ..+. .. .....+.+++.+||+.||.+|||++|+++
T Consensus 319 ~~~~~~-~~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQF-SSPE-WD----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCCC-CHHH-HS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCC-CCcc-cc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111100 0000 00 11236889999999999999999999986
No 205
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.1e-38 Score=327.77 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=198.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|+.+ +|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 3566789999999999999987 689999999865432 2346788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 514 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~ 514 (679)
+. ++|.+++... ....+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 84 LH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred cc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 97 6999998754 23568999999999999999999999 9999999999999999999999999999876543322
Q ss_pred cccccccCCccccCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC-e----ee--
Q 005750 515 HISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD-V----IS-- 586 (679)
Q Consensus 515 ~~~~~~~gt~~y~aPE~l~~~~-~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~-~----~~-- 586 (679)
. .....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...+..+ .+............ . ..
T Consensus 159 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 T-YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp C-TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred c-cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHHHhCCCchhhhhHhhcCc
Confidence 1 22335799999999987765 7999999999999999999999997433211 11111111100000 0 00
Q ss_pred eecccccC----C---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 587 IVDPVLIG----N---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 587 ~~d~~l~~----~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
...+.... . ........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 0 00112346889999999999999999999987
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.3e-39 Score=333.78 Aligned_cols=257 Identities=25% Similarity=0.348 Sum_probs=184.5
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 45667899999999999999865 68999999986532 33456788999999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 435 MHNGTLRDRLHGSV-----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 435 ~~~gsL~~~l~~~~-----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+++++|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999986421 24568999999999999999999999 99999999999999999999999999998765
Q ss_pred ccCcc----cccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 510 EEDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 510 ~~~~~----~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
..... .......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ... .... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~----~~~~-~~ 244 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LML----TLQN-DP 244 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHH----HHTS-SC
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHH----Hhcc-CC
Confidence 43211 11223458999999999865 4689999999999999999999999974332211 111 1111 11
Q ss_pred ee----eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 585 IS----IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 585 ~~----~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ..++.... .....+.+++.+||+.||.+|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLK----KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCC----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhh----hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 11111111 22346889999999999999999999986
No 207
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.5e-38 Score=362.88 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=207.8
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
+....|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 344567788999999999999998752 5679999987643 3345779999999999999999999999854 568
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999742 4568999999999999999999999 9999999999999999999999999999987
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
.............+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... ..... +..+...
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~----i~~~~~~-- 611 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGR----IENGERL-- 611 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHHTCCC--
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHH----HHcCCCC--
Confidence 65543333334456789999999988899999999999999999997 99999743221 12111 1111111
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
..+...+..+.+++.+||+.||.+|||+.||++.|+++...+
T Consensus 612 -------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 -------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 111223357889999999999999999999999999987654
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.7e-38 Score=354.13 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=199.6
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-------------hhHHHHHHHHHHHHhccCCCcccccccc
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 422 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 422 (679)
..|.+.++||+|+||+||+|..+ +++.||+|++..... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 45778899999999999999986 588999999875421 2346788999999999999999999999
Q ss_pred cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC---cEE
Q 005750 423 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 499 (679)
Q Consensus 423 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 499 (679)
.+.+..++||||+++|+|.+.+.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999998874 4569999999999999999999999 9999999999999998765 699
Q ss_pred EeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhH
Q 005750 500 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 579 (679)
Q Consensus 500 L~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 579 (679)
|+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .+.. .+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DIIK----KV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HH
Confidence 999999987654322 233458999999999875 6899999999999999999999999743321 1111 11
Q ss_pred hcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 580 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 580 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
..+.... +...... ....+.+++.+||+.||.+|||++|+++.
T Consensus 260 ~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2222110 0000011 12468899999999999999999999863
No 209
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2e-38 Score=339.77 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=192.0
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc-----------hhHHHHHHHHHHHHhccCCCcccccccc---
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-----------HRTQQFVTEVALLSRIHHRNLVPLIGYC--- 422 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~hpnIv~l~~~~--- 422 (679)
..|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 34566899999999999999988899999999854321 1237789999999999999999999998
Q ss_pred --cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEE
Q 005750 423 --EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 500 (679)
Q Consensus 423 --~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 500 (679)
......++||||+. |+|.+.+.. ....+++..++.++.||+.||.|||+ ++|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEE
Confidence 33447899999997 688888874 34579999999999999999999999 99999999999999999999999
Q ss_pred eeccCccccccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhH
Q 005750 501 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 579 (679)
Q Consensus 501 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 579 (679)
+|||++........ .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ...+....
T Consensus 176 ~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~ 250 (362)
T 3pg1_A 176 CDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVV 250 (362)
T ss_dssp CCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHH
T ss_pred EecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHc
Confidence 99999975443322 233458899999999876 6789999999999999999999999975432211 11111111
Q ss_pred hcCCee-----------eeeccccc-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 580 KKGDVI-----------SIVDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 580 ~~~~~~-----------~~~d~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
...... ..+..... ..........+.+++.+||+.||.+|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 100000 00000000 00011223468899999999999999999999863
No 210
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-38 Score=343.52 Aligned_cols=265 Identities=21% Similarity=0.234 Sum_probs=196.8
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc-----------
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 424 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----------- 424 (679)
..|++.+.||+|+||.||+|.+. +|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 35677899999999999999875 799999999865422 23479999999999999999998843
Q ss_pred ---------------------------cceEEEEEEecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 005750 425 ---------------------------EHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGC 476 (679)
Q Consensus 425 ---------------------------~~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~ 476 (679)
....++||||++ |+|.+.+.... ....+++..++.++.||+.||+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-- 159 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-- 159 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 334889999997 58777765422 45679999999999999999999998
Q ss_pred CCCccccCCCCCCcccc-CCCcEEEeeccCccccccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHH
Q 005750 477 NPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELI 554 (679)
Q Consensus 477 ~~~ivH~Dlkp~NIll~-~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~ell 554 (679)
+||+||||||+||+++ .++.+||+|||++........ .....+|+.|+|||++.+. .++.++||||+||++|+|+
T Consensus 160 -~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 160 -LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp -TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred -CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 9999999999999998 689999999999987644332 2234579999999998765 5899999999999999999
Q ss_pred hCCCCCCcccccchhhHHHHHHHhHhc----------CCeeeeeccccc-----CCCCHHHHHHHHHHHHHhcccCCCCC
Q 005750 555 SGKKPVSVEDFGAELNIVHWARSMIKK----------GDVISIVDPVLI-----GNVKIESIWRIAEVAIQCVEQRGFSR 619 (679)
Q Consensus 555 tG~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~d~~l~-----~~~~~~~~~~l~~li~~cl~~dP~~R 619 (679)
+|+.||.+.+..+ .+...+. .... .......-+... ...+......+.+++.+||+.||.+|
T Consensus 237 ~g~~pf~~~~~~~--~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 237 LGKPLFSGETSID--QLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred hCCCCCCCCChHH--HHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999997543321 1111111 1100 000000000000 00112234468899999999999999
Q ss_pred CCHHHHHHH--HHhhhh
Q 005750 620 PKMQEIVLA--IQDSIK 634 (679)
Q Consensus 620 Pt~~evl~~--L~~~~~ 634 (679)
||+.|+++. ++++..
T Consensus 314 ~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 314 INPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCHHHHHTSGGGHHHHH
T ss_pred CCHHHHhcCHHHHHHHh
Confidence 999999853 544433
No 211
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4e-38 Score=363.50 Aligned_cols=248 Identities=25% Similarity=0.333 Sum_probs=203.4
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhc-cCCCcccccccccccceEEE
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 430 (679)
...|++.+.||+|+||.||+|+.+ +++.||||++++.. ....+.+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 345677899999999999999876 58899999987532 23446788899999988 79999999999999999999
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999984 3579999999999999999999999 999999999999999999999999999998643
Q ss_pred cCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +....... +..
T Consensus 494 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~-~~~------ 559 (674)
T 3pfq_A 494 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIME-HNV------ 559 (674)
T ss_dssp CTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHS-SCC------
T ss_pred cCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHHHHHh-CCC------
Confidence 3222 234456999999999999999999999999999999999999999743321 11112221 111
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 627 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 627 (679)
.++......+.+|+.+||+.||.+||++ +||++
T Consensus 560 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 ----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1112233478899999999999999998 66654
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.5e-37 Score=334.33 Aligned_cols=258 Identities=22% Similarity=0.277 Sum_probs=190.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccc------eE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~ 428 (679)
.|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 4677899999999999999876 6899999998753 2344567889999999999999999999987654 78
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||++ |+|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999996 57888875 248899999999999999999999 9999999999999999999999999999987
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHH-------------
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA------------- 575 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~------------- 575 (679)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.... +....
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHHTT
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHH
Confidence 54332 12334689999999999999999999999999999999999999975432211 10000
Q ss_pred -----HHhHhcCCe------eeeecccccCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 576 -----RSMIKKGDV------ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 576 -----~~~~~~~~~------~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
......... ...+........ .......+.+++.+||+.||.+|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 000000000000 11235578999999999999999999999874
No 213
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-37 Score=332.43 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=199.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCccccccccccc-----ceEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 430 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~l 430 (679)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4677899999999999999876 68899999997543 33457789999999999999999999998654 46899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+. |+|.+++.. ..+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++....
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999996 599998863 469999999999999999999999 999999999999999999999999999998765
Q ss_pred cCcccc--cccccCCccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee-
Q 005750 511 EDLTHI--SSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS- 586 (679)
Q Consensus 511 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~- 586 (679)
...... .....||+.|+|||++. +..++.++|||||||++|+|++|+.||.......... .+...........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN---HILGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH---HHHHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH---HHHHHhCCCCHHHH
Confidence 432221 23446899999999864 4568999999999999999999999997544332211 1111111000000
Q ss_pred --e--------ecccc-cCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 587 --I--------VDPVL-IGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 587 --~--------~d~~l-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
. ..... .... .......+.+++.+||+.||.+|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000 0000 01123468899999999999999999999863
No 214
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.5e-38 Score=343.24 Aligned_cols=260 Identities=23% Similarity=0.274 Sum_probs=192.9
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc------eEEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QRILV 431 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~~lV 431 (679)
.|.+.+.||+|+||.||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 4677899999999999999998777799998864322 2236999999999999999999985433 47899
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc-CCCcEEEeeccCccccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 510 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfgla~~~~ 510 (679)
|||++++.+............+++..++.++.||+.||+|||+ +||+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999875444333222245679999999999999999999999 9999999999999999 79999999999998764
Q ss_pred cCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh----------H
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM----------I 579 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~----------~ 579 (679)
.... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+ .+....... .
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHH
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhh
Confidence 4322 2234589999999998764 58999999999999999999999998543321 111111110 0
Q ss_pred h----cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 580 K----KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 580 ~----~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
. .......-...............+.+++.+||+.||.+|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0 000000000000000111233478999999999999999999999874
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.3e-38 Score=325.72 Aligned_cols=249 Identities=25% Similarity=0.302 Sum_probs=201.1
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---------chhHHHHHHHHHHHHhcc-CCCcccccccccccc
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---------SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH 426 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~ 426 (679)
.|++.+.||+|+||.||+|.++ +|+.||||++.... ....+.+.+|+++++++. ||||+++++++...+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4667899999999999999986 68999999986542 123456889999999995 999999999999999
Q ss_pred eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCc
Q 005750 427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 506 (679)
Q Consensus 427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla 506 (679)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999974 4578999999999999999999999 99999999999999999999999999999
Q ss_pred cccccCcccccccccCCccccCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHh
Q 005750 507 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 580 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 580 (679)
........ .....+++.|+|||++. ...++.++||||||+++|+|++|+.||...... .... . +.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~---~-~~ 242 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LMLR---M-IM 242 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HHHH---H-Hh
Confidence 87654322 23345899999999874 457889999999999999999999999733221 1111 1 11
Q ss_pred cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 581 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 581 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+... ... .........+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~-~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQ-FGS-----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCC-CCT-----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCcc-cCc-----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111 000 111223457889999999999999999999986
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-38 Score=341.59 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=182.4
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCccccccccccc------ce
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQ 427 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------~~ 427 (679)
..|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 35677899999999999999865 6899999998653 234557788999999999999999999998653 56
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.++|+|++ +++|.+++. ...+++..+..++.||++||+|||+ .||+||||||+||+++.++.+||+|||+++
T Consensus 109 ~~lv~e~~-~~~L~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred EEEEeccc-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 79999999 789998886 3569999999999999999999999 999999999999999999999999999998
Q ss_pred ccccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe--
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV-- 584 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 584 (679)
..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.... ...+.........
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAEL 253 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHH
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHH
Confidence 75432 223468999999999877 6889999999999999999999999975443211 1111111110000
Q ss_pred ---------eeeecccc-cCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 585 ---------ISIVDPVL-IGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 585 ---------~~~~d~~l-~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
...+.... ..... ......+.+|+.+||+.||.+|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000 00000 1123468899999999999999999999864
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-37 Score=323.10 Aligned_cols=250 Identities=24% Similarity=0.402 Sum_probs=193.0
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc-----------
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 424 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----------- 424 (679)
..|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45778899999999999999975 7999999998643 3455778999999999999999999998743
Q ss_pred --cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEee
Q 005750 425 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 502 (679)
Q Consensus 425 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 502 (679)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 46789999999999999999752 4567889999999999999999999 9999999999999999999999999
Q ss_pred ccCccccccCc-------------ccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccch
Q 005750 503 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 568 (679)
Q Consensus 503 fgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~ 568 (679)
||++....... ........|++.|+|||++.+. .++.++|||||||++|+|++ ||... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--~~~ 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--MER 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--HHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--hhH
Confidence 99998754321 1112234588999999999764 78999999999999999998 55411 111
Q ss_pred hhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 569 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
..... . +.... ..............+.+++.+||+.||.+|||++|+++
T Consensus 235 ~~~~~---~-~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILK---K-LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHH---H-HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHH---h-ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111 1 11111 11112233334456889999999999999999999986
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-38 Score=342.62 Aligned_cols=251 Identities=10% Similarity=0.034 Sum_probs=178.9
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhc--cCCCccccccc-------cccc
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLIGY-------CEEE 425 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~hpnIv~l~~~-------~~~~ 425 (679)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++.+ +||||++++.. +...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 567899999999999999976 789999999986532 3456678886655555 59998885532 2211
Q ss_pred -----------------ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCccc
Q 005750 426 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 482 (679)
Q Consensus 426 -----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~qia~aL~~LH~~~~~~ivH 482 (679)
...++||||++ |+|.+++... +..+.+..+ ..++.||+.||+|||+ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 44899999998 8999999853 223344455 6778999999999999 99999
Q ss_pred cCCCCCCccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 005750 483 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 560 (679)
Q Consensus 483 ~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~s~ksDVwSlGvll~elltG~~pf 560 (679)
|||||+|||++.++.+||+|||+++...... ....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998764322 13346799999999987 68999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 561 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.......... .........................+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 8443221100 0000000000001111111133457889999999999999999999975
No 219
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.5e-38 Score=330.72 Aligned_cols=263 Identities=22% Similarity=0.298 Sum_probs=203.4
Q ss_pred HHHHhhccccCcCccEEEEEEEE-c-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC------cccccccccccce
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEEEHQ 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~~~~~~~ 427 (679)
...|++.+.||+|+||.||+|.. + +++.||||++... ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 44678889999999999999987 3 6899999999754 344577889999999997654 9999999999999
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-------------
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------- 494 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~------------- 494 (679)
.++||||+ +++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 89999998754 23468999999999999999999999 99999999999999987
Q ss_pred ------CCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch
Q 005750 495 ------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 568 (679)
Q Consensus 495 ------~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~ 568 (679)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999865432 2234589999999999999999999999999999999999999975433222
Q ss_pred hhHHHHHHHh-----HhcCCeeeee---------------------ccc-ccCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 005750 569 LNIVHWARSM-----IKKGDVISIV---------------------DPV-LIGNVKIESIWRIAEVAIQCVEQRGFSRPK 621 (679)
Q Consensus 569 ~~~~~~~~~~-----~~~~~~~~~~---------------------d~~-l~~~~~~~~~~~l~~li~~cl~~dP~~RPt 621 (679)
.......... .......... .+. -...........+.+++.+||+.||.+|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 1111111000 0000000000 000 001112345678999999999999999999
Q ss_pred HHHHHHH
Q 005750 622 MQEIVLA 628 (679)
Q Consensus 622 ~~evl~~ 628 (679)
++|+++.
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999853
No 220
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=339.99 Aligned_cols=265 Identities=19% Similarity=0.269 Sum_probs=182.9
Q ss_pred HHhh-ccccCcCccEEEEEEEEc---CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccc--cccceEEEE
Q 005750 358 TNNF-CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRILV 431 (679)
Q Consensus 358 ~~~~-~~~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~--~~~~~~~lV 431 (679)
.|++ .++||+|+||.||+|+++ +++.||||++.... ....+.+|++++++++||||+++++++ ......++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3444 568999999999999976 57899999997542 235678999999999999999999999 457789999
Q ss_pred EEecCCCcHhhhhcccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc----cCCCcEEEe
Q 005750 432 YEYMHNGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVS 501 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~ 501 (679)
|||+. |+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 58877775321 22359999999999999999999999 999999999999999 678899999
Q ss_pred eccCccccccCcc--cccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccc------hhhHH
Q 005750 502 DFGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA------ELNIV 572 (679)
Q Consensus 502 Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~------~~~~~ 572 (679)
|||++........ .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987654322 12234568999999999877 458999999999999999999999997443210 01111
Q ss_pred HHHHHhHhcCCe--eeeec-------------ccccCCCC---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 573 HWARSMIKKGDV--ISIVD-------------PVLIGNVK---------IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 573 ~~~~~~~~~~~~--~~~~d-------------~~l~~~~~---------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
..+...+..... ...+. ........ ......+.+|+.+||+.||.+|||++|+++.
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111110000 00000 00000000 0012367899999999999999999999873
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=330.68 Aligned_cols=249 Identities=24% Similarity=0.394 Sum_probs=193.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccc------cceEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRI 429 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~------~~~~~ 429 (679)
.|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. .+..+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 4667899999999999999985 68999999986542 3457788999999999 79999999999866 56889
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
+||||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 104 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 999999999999999754 24578999999999999999999999 99999999999999999999999999999875
Q ss_pred ccCcccccccccCCccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 510 EEDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 510 ~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
..... ......|++.|+|||++. +..++.++|||||||++|+|++|+.||....... .. ..... ...
T Consensus 180 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---~~~~~-~~~ 251 (326)
T 2x7f_A 180 DRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---AL---FLIPR-NPA 251 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH---HHHHH-SCC
T ss_pred CcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HH---HHhhc-Ccc
Confidence 43322 122345899999999986 5678999999999999999999999997332211 11 11111 111
Q ss_pred eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.... .......+.+++.+||+.||.+||+++|+++
T Consensus 252 ~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 1112347889999999999999999999987
No 222
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.6e-38 Score=332.76 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=197.3
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHH-HHhccCCCcccccccccccceEEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
..|++.+.||+|+||.||+|+.. +|+.||||++.... .....++..|..+ ++.++||||+++++++...+..++|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 34667889999999999999875 79999999997643 3344556666665 677899999999999999999999999
Q ss_pred ecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 434 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
|+++ +|.+++.... ....+++..++.++.||+.||+|||+ + +|+||||||+||+++.++.+||+|||++.....
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 9975 9988876432 35679999999999999999999998 6 999999999999999999999999999977643
Q ss_pred CcccccccccCCccccCCcccC----CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 512 DLTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l~----~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
... .....||+.|+|||++. ...++.++|||||||++|+|++|+.||...... ... .......... ..
T Consensus 207 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~~~----~~~~~~~~~~-~~ 278 (340)
T 3an0_A 207 SVA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQ----LKQVVEEPSP-QL 278 (340)
T ss_dssp HHH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHH----HHHHHHSCCC-CC
T ss_pred ccc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-HHH----HHHHhcCCCC-CC
Confidence 221 22345899999999964 347899999999999999999999999732221 111 1122221111 00
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
. .......+.+++.+||+.||++|||++|+++
T Consensus 279 ~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 P--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp C--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C--------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 1122347889999999999999999999987
No 223
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-37 Score=341.50 Aligned_cols=198 Identities=26% Similarity=0.328 Sum_probs=171.9
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc------cCCCcccccccccccceEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQRI 429 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~hpnIv~l~~~~~~~~~~~ 429 (679)
..|++.+.||+|+||.||+|... +++.||||++... ....+++.+|+++++.+ +|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 45778899999999999999876 5899999999754 33456778899988887 4679999999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc--EEEeeccCcc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSR 507 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Dfgla~ 507 (679)
+||||+. ++|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||++.
T Consensus 176 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999995 6999988754 23458999999999999999999999 99999999999999999887 9999999997
Q ss_pred ccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCccc
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 564 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~ 564 (679)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 65432 223468999999999999999999999999999999999999997544
No 224
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.8e-38 Score=334.05 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=202.9
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcch-----------------hHHHHHHHHHHHHhccCCCccccc
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-----------------RTQQFVTEVALLSRIHHRNLVPLI 419 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~hpnIv~l~ 419 (679)
..|++.+.||+|+||.||+|.. +++.||+|++...... ..+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3567789999999999999999 8999999998643211 117899999999999999999999
Q ss_pred ccccccceEEEEEEecCCCcHhhh------hcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750 420 GYCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 493 (679)
Q Consensus 420 ~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 493 (679)
+++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ .+||+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 999999999999999999999998 5432 25779999999999999999999996 37999999999999999
Q ss_pred CCCcEEEeeccCccccccCcccccccccCCccccCCcccCCC-CCCc-hhHHHHHHHHHHHHHhCCCCCCcccccchhhH
Q 005750 494 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNI 571 (679)
Q Consensus 494 ~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~-ksDVwSlGvll~elltG~~pf~~~~~~~~~~~ 571 (679)
.++.+||+|||++...... ......|++.|+|||++.+. .++. ++|||||||++|+|++|+.||...... ...
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VEL 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHH
Confidence 9999999999999876443 22344689999999999887 6666 999999999999999999999743331 112
Q ss_pred HHHHHHhHhcCCeeeeec------cccc---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 572 VHWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 572 ~~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.+. +..+......+ +... ..........+.+++.+||+.||.+|||++|+++
T Consensus 262 ~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 22221111000 0000 0001223457889999999999999999999986
No 225
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-37 Score=332.69 Aligned_cols=273 Identities=20% Similarity=0.318 Sum_probs=205.7
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-----------CCCcccccccc
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYC 422 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~~ 422 (679)
....|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 3456788899999999999999875 6899999999753 334567889999999886 89999999998
Q ss_pred cccc----eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCcccc----
Q 005750 423 EEEH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD---- 493 (679)
Q Consensus 423 ~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~---- 493 (679)
...+ ..++|||++ +++|.+++... ....+++..++.++.||+.||+|||+ + ||+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCC
Confidence 7654 789999999 89999999754 24568999999999999999999999 8 999999999999994
Q ss_pred --CCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccch---
Q 005750 494 --INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--- 568 (679)
Q Consensus 494 --~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~--- 568 (679)
..+.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 44589999999998765432 234589999999999999999999999999999999999999984432211
Q ss_pred hhHHHHHHHhHhc--------CC----------eeeeecc----------cccCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 005750 569 LNIVHWARSMIKK--------GD----------VISIVDP----------VLIGNVKIESIWRIAEVAIQCVEQRGFSRP 620 (679)
Q Consensus 569 ~~~~~~~~~~~~~--------~~----------~~~~~d~----------~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 620 (679)
......+...+.. +. ....+.. .-....+......+.+++.+||+.||.+||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 1111111111100 00 0000000 001123456677899999999999999999
Q ss_pred CHHHHHH--HHHhhhhhhc
Q 005750 621 KMQEIVL--AIQDSIKIEK 637 (679)
Q Consensus 621 t~~evl~--~L~~~~~~~~ 637 (679)
|++|+++ .+++....+.
T Consensus 327 t~~ell~hp~f~~~~~~~~ 345 (373)
T 1q8y_A 327 DAGGLVNHPWLKDTLGMEE 345 (373)
T ss_dssp CHHHHHTCGGGTTCTTCTT
T ss_pred CHHHHhhChhhhcccCccc
Confidence 9999987 4555544433
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6e-38 Score=330.71 Aligned_cols=260 Identities=21% Similarity=0.273 Sum_probs=198.2
Q ss_pred HHhhccccCcCccEEEEEEEEc--CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhc---cCCCccccccccc-----cc
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 425 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~-----~~ 425 (679)
.|++.+.||+|+||.||+|++. +|+.||+|++..... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 4677899999999999999983 688999999864322 1223566788877776 7999999999986 56
Q ss_pred ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccC
Q 005750 426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 505 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgl 505 (679)
...++||||+. |+|.+++... ....+++..++.++.|++.||.|||+ +||+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 78899999997 6999998754 24458999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 506 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 506 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
+....... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+..........
T Consensus 167 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGG
T ss_pred cccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcc
Confidence 98765332 2233458999999999999999999999999999999999999997433221 111111111100000
Q ss_pred ee----------ec---ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 586 SI----------VD---PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 586 ~~----------~d---~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. +. ..............+.+++.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00 00000111223456889999999999999999999985
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=331.98 Aligned_cols=259 Identities=21% Similarity=0.278 Sum_probs=191.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccc--------------
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-------------- 422 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-------------- 422 (679)
.|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4667899999999999999987 4899999999876666678899999999999999999999876
Q ss_pred cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc-CCCcEEEe
Q 005750 423 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVS 501 (679)
Q Consensus 423 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~ 501 (679)
.+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++ +++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 34467899999997 69999986 3568999999999999999999999 9999999999999997 57799999
Q ss_pred eccCccccccCccc--ccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 005750 502 DFGLSRQAEEDLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 578 (679)
Q Consensus 502 Dfgla~~~~~~~~~--~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 578 (679)
|||++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ...... .
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~-~ 240 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILE-S 240 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH-H
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH-h
Confidence 99999876432211 1223347889999998755 6789999999999999999999999974432211 111110 0
Q ss_pred Hhc----------CCeeeeeccccc-CC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 579 IKK----------GDVISIVDPVLI-GN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 579 ~~~----------~~~~~~~d~~l~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... ......+..... .. ........+.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 000000000000 00 00112347889999999999999999999986
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.6e-37 Score=325.90 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=196.0
Q ss_pred HHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCC--cchhHHHHHHHHHHHHhcc--CCCcccccccccccceEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~l 430 (679)
....|++.+.||+|+||.||+|...+++.||+|++... .....+.+.+|++++++++ ||||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34457778999999999999999988999999998643 2345578899999999997 5999999999999999999
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||| +.+++|.+++.. ...+++..++.++.|+++||+|||+ ++|+||||||+||+++ ++.+||+|||++....
T Consensus 106 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeecccccccc
Confidence 999 568899999984 4578999999999999999999999 9999999999999996 4899999999998765
Q ss_pred cCccc-ccccccCCccccCCcccCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 005750 511 EDLTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 578 (679)
Q Consensus 511 ~~~~~-~~~~~~gt~~y~aPE~l~~-----------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 578 (679)
..... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..... .. ......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~----~~~~~~ 252 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QI----SKLHAI 252 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-HH----HHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-HH----HHHHHH
Confidence 43221 1233458999999999875 4788999999999999999999999973221 11 111112
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
...... ...+......+.+++.+||+.||.+|||++|+++.
T Consensus 253 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 253 IDPNHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HCTTSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhcccc---------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 211111 11111123468899999999999999999999864
No 229
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=329.71 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=197.7
Q ss_pred HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
..|++.+.||+|+||.||+|.+++ .||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~ 110 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence 446778999999999999998864 49999986532 22345678899999999999999999999999999999999
Q ss_pred cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc-
Q 005750 435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 513 (679)
Q Consensus 435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~- 513 (679)
+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++ ++.+||+|||++.......
T Consensus 111 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 111 CKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999742 4568999999999999999999999 9999999999999998 6899999999987643211
Q ss_pred ---ccccccccCCccccCCcccCC---------CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750 514 ---THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 581 (679)
Q Consensus 514 ---~~~~~~~~gt~~y~aPE~l~~---------~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 581 (679)
........|++.|+|||++.+ ..++.++|||||||++|+|++|+.||...... .... .+..
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~----~~~~ 257 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AIIW----QMGT 257 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HHHH----HHHT
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----Hhcc
Confidence 111223458899999999864 45789999999999999999999999743221 1111 1122
Q ss_pred CCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 005750 582 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 636 (679)
Q Consensus 582 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 636 (679)
+........ .....+.+++.+||+.||.+|||++|+++.|+++....
T Consensus 258 ~~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 258 GMKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TCCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 211111111 11235889999999999999999999999999987753
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.4e-38 Score=343.44 Aligned_cols=258 Identities=24% Similarity=0.275 Sum_probs=192.5
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc------cceEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQRIL 430 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------~~~~~l 430 (679)
.|++.+.||+|+||.||+|++. +|+.||||++.... ....+|++++++++||||+++++++.. ....++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4667899999999999999986 59999999986542 223479999999999999999998843 234679
Q ss_pred EEEecCCCcHhhhhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC-CcEEEeeccCccc
Q 005750 431 VYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQ 508 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfgla~~ 508 (679)
||||+++ +|.+.+... .....+++..++.++.||++||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 666555432 145679999999999999999999999 999999999999999955 6789999999987
Q ss_pred cccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh-------Hh
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-------IK 580 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~-------~~ 580 (679)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+.. ..+.+.+... +.
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHH
Confidence 544322 2234589999999998764 7899999999999999999999999754322 1222222110 00
Q ss_pred --cCCeeeeecccccCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 581 --KGDVISIVDPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 581 --~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.....+..-+.+... +.......+.+|+.+||+.||.+|||+.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 001111111111000 11122357899999999999999999999986
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1e-37 Score=333.77 Aligned_cols=266 Identities=19% Similarity=0.240 Sum_probs=187.0
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc------
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------ 426 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 426 (679)
.....|++.+.||+|+||.||+|++. +|+.||||++.... .......+|++.++.++||||+++++++...+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 34456777899999999999999986 68999999986542 22345667888889999999999999985533
Q ss_pred -eEEEEEEecCCCcHhhhhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCccccCCCCCCccccC-CCcEEEe
Q 005750 427 -QRILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVS 501 (679)
Q Consensus 427 -~~~lV~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~qia~aL~~LH--~~~~~~ivH~Dlkp~NIll~~-~~~~kL~ 501 (679)
..++||||++++ |.+.+.. ......+++..+..++.|++.||.||| + ++|+||||||+|||++. ++.+||+
T Consensus 99 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 99 IYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp EEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred eeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEe
Confidence 378999999864 4443332 224667899999999999999999999 7 99999999999999996 8999999
Q ss_pred eccCccccccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh--
Q 005750 502 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-- 578 (679)
Q Consensus 502 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~-- 578 (679)
|||++........ .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+... .+.......
T Consensus 175 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~ 250 (360)
T 3e3p_A 175 DFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHEIVRVLGC 250 (360)
T ss_dssp CCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCC
T ss_pred eCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHHHHHHcCC
Confidence 9999987654332 2234589999999998654 48999999999999999999999997443321 111111110
Q ss_pred --------Hhc-CCeeeeecc------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 579 --------IKK-GDVISIVDP------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 579 --------~~~-~~~~~~~d~------~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+.. .......+. .............+.+++.+||+.||.+|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 000000000 00111122245679999999999999999999999863
No 232
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-37 Score=332.60 Aligned_cols=259 Identities=20% Similarity=0.246 Sum_probs=196.4
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCccccccccccc-----ceEEE
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 430 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~~~~l 430 (679)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 4667899999999999999986 68999999997543 33456788999999999999999999987653 67899
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||+. |+|.+++.. ..+++..++.++.|++.||+|||+ +||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 999996 699998873 468999999999999999999999 999999999999999999999999999998764
Q ss_pred cCccc---------ccccccCCccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHh
Q 005750 511 EDLTH---------ISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 580 (679)
Q Consensus 511 ~~~~~---------~~~~~~gt~~y~aPE~l~-~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 580 (679)
..... ......||+.|+|||++. +..++.++|||||||++|+|++|+.||.+.+.... ...+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhC
Confidence 32211 112245899999999875 47889999999999999999999999975432211 111111111
Q ss_pred cCCeee------------eecc--cccC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 581 KGDVIS------------IVDP--VLIG----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 581 ~~~~~~------------~~d~--~l~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
...... .+.. .... .........+.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000 0000 000122346889999999999999999999987
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.3e-37 Score=330.10 Aligned_cols=254 Identities=21% Similarity=0.304 Sum_probs=193.8
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceE------
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR------ 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~------ 428 (679)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 5667889999999999999876 68999999997642 33457788999999999999999999999876654
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 123 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 68888774 348999999999999999999999 9999999999999999999999999999986
Q ss_pred cccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+. +.. +....... ..+.
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~-i~~~~~~~-~~~~ 265 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQ-ILKVTGVP-GTEF 265 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCC-CHHH
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH-HHHHhCCC-cHHH
Confidence 5433 223458999999999877 6889999999999999999999999974432211 111 11100000 0000
Q ss_pred ---------------ecccccCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 588 ---------------VDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 588 ---------------~d~~l~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
+....... ........+.+++.+||+.||.+|||++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000 001123478899999999999999999999864
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.9e-37 Score=321.25 Aligned_cols=254 Identities=26% Similarity=0.353 Sum_probs=203.9
Q ss_pred hHHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750 352 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 428 (679)
Q Consensus 352 ~~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 428 (679)
.......|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3455678889999999999999999986 68999999986532 23457889999999999999999999999999999
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC---CcEEEeeccC
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGL 505 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfgl 505 (679)
++||||+++++|.+.+.. ...+++..++.++.|++.||.|||+ ++++||||||+||+++.+ +.+||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 999999999999998873 3568999999999999999999999 999999999999999754 4799999999
Q ss_pred ccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 506 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 506 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
+........ .....+++.|+|||.+.+. ++.++||||||+++|+|++|+.||...... .... .+..+...
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~ 240 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILK----RVETGKYA 240 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCC
T ss_pred ceeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCCC
Confidence 987644322 1223478899999998764 899999999999999999999999743221 1111 12222211
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.... ... .....+.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~--~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FDLP--QWR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSG--GGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCch--hhh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1000 001 12346889999999999999999999987
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=329.78 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=194.2
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccce------E
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------R 428 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~------~ 428 (679)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 4666789999999999999876 69999999997542 2345678899999999999999999999877653 4
Q ss_pred EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
++||||+. ++|.+++. ..+++..++.++.||+.||+|||+ +||+||||||+||+++.++.+||+|||++..
T Consensus 105 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999997 68888764 348999999999999999999999 9999999999999999999999999999986
Q ss_pred cccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcC-----
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG----- 582 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~----- 582 (679)
.... .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.... ...+.......
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFV 248 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHH
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence 5432 223458999999999877 6789999999999999999999999975432211 11111110000
Q ss_pred -------------CeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750 583 -------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 628 (679)
Q Consensus 583 -------------~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 628 (679)
.......+.+ ..........+.+++.+||+.||.+|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000 11112334578999999999999999999999863
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.6e-37 Score=330.19 Aligned_cols=200 Identities=28% Similarity=0.314 Sum_probs=170.2
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CC-----CcccccccccccceEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRI 429 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hp-----nIv~l~~~~~~~~~~~ 429 (679)
..|++.+.||+|+||.||+|... +++.||||+++.. .....++.+|+++++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45777899999999999999876 6889999999754 334567788999998885 55 4899999999999999
Q ss_pred EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc--CCCcEEEeeccCcc
Q 005750 430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSR 507 (679)
Q Consensus 430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kL~Dfgla~ 507 (679)
+||||+. |+|.+++... ....+++..++.++.|++.||.|||+ ...+|+||||||+|||++ .++.+||+|||++.
T Consensus 133 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 9999995 5999998754 23568999999999999999999994 127999999999999995 57889999999998
Q ss_pred ccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCccc
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 564 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~ 564 (679)
...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 210 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 764432 23468999999999999999999999999999999999999998443
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-37 Score=329.30 Aligned_cols=262 Identities=19% Similarity=0.252 Sum_probs=200.9
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CC-cEEEEEEecCCcchhHHHHHHHHHHHHhccCCC------cccccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEE 424 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------Iv~l~~~~~~ 424 (679)
+.....|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++..
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 333457788999999999999999875 34 78999999754 344577889999999997665 8889999999
Q ss_pred cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccc------------
Q 005750 425 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL------------ 492 (679)
Q Consensus 425 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll------------ 492 (679)
.+..++||||+ ++++.+.+... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 66777776643 23569999999999999999999999 999999999999999
Q ss_pred -------cCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccc
Q 005750 493 -------DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 565 (679)
Q Consensus 493 -------~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~ 565 (679)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999998654332 234689999999999999999999999999999999999999974433
Q ss_pred cchhhHHHHHHHhHhc--------CCeee-eeccc---------------------ccCCCCHHHHHHHHHHHHHhcccC
Q 005750 566 GAELNIVHWARSMIKK--------GDVIS-IVDPV---------------------LIGNVKIESIWRIAEVAIQCVEQR 615 (679)
Q Consensus 566 ~~~~~~~~~~~~~~~~--------~~~~~-~~d~~---------------------l~~~~~~~~~~~l~~li~~cl~~d 615 (679)
.... ..+...... ..... ..... ............+.+++.+||+.|
T Consensus 245 ~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 245 REHL---VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp HHHH---HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred HHHH---HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 2211 111111100 00000 00000 000112234557899999999999
Q ss_pred CCCCCCHHHHHH
Q 005750 616 GFSRPKMQEIVL 627 (679)
Q Consensus 616 P~~RPt~~evl~ 627 (679)
|.+|||++|+++
T Consensus 322 P~~Rpt~~e~l~ 333 (355)
T 2eu9_A 322 PAQRITLAEALL 333 (355)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCcCHHHHhc
Confidence 999999999985
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.9e-37 Score=325.95 Aligned_cols=253 Identities=26% Similarity=0.338 Sum_probs=177.6
Q ss_pred HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHH-HHHhccCCCcccccccccccceEEEEEEe
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEY 434 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~~~~~~lV~E~ 434 (679)
.|++.+.||+|+||.||+|..+ +|+.||||++.... .....++..|+. +++.++||||+++++++...+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence 4566789999999999999986 68999999997643 233455666666 67777999999999999999999999999
Q ss_pred cCCCcHhhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750 435 MHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 435 ~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~ 511 (679)
+++ +|.+++.... ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 975 8877765311 25678999999999999999999999 7 999999999999999999999999999987654
Q ss_pred CcccccccccCCccccCCccc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 512 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 512 ~~~~~~~~~~gt~~y~aPE~l----~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
... .....|++.|+|||++ .+..++.++|||||||++|+|++|+.||...... .+...... .+..
T Consensus 179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~~--- 247 (327)
T 3aln_A 179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQVV-KGDP--- 247 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC-CSCC---
T ss_pred ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHHHh-cCCC---
Confidence 322 2223589999999998 4567899999999999999999999999732211 01000000 0111
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
+.+...........+.+++.+||+.||.+|||+.|+++
T Consensus 248 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 --PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111223457889999999999999999999986
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.9e-37 Score=325.20 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=172.7
Q ss_pred HHhhc-cccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc----cceEEEE
Q 005750 358 TNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 431 (679)
Q Consensus 358 ~~~~~-~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lV 431 (679)
.|.+. +.||+|+||.||+|.++ +++.||||++.... ....+....++.++||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 45553 46999999999999987 69999999986531 112222334566799999999999865 5568999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 508 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~~ 508 (679)
|||+++|+|.+++... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++. ++.+||+|||++..
T Consensus 105 ~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 105 MECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999854 24579999999999999999999999 99999999999999976 45599999999986
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
..... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......+..+..
T Consensus 181 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~---- 250 (336)
T 3fhr_A 181 TTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI---SPGMKRRIRLGQY---- 250 (336)
T ss_dssp C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred ccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh---hhhHHHhhhcccc----
Confidence 54322 2234579999999999988999999999999999999999999973322111 0000011111000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHh
Q 005750 589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQD 631 (679)
Q Consensus 589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~ 631 (679)
.............+.+++.+||+.||.+|||++|+++ .+++
T Consensus 251 --~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 251 --GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred --ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 0000111123447889999999999999999999997 4444
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.2e-37 Score=335.52 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=185.7
Q ss_pred hccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEEecCCCc
Q 005750 361 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGT 439 (679)
Q Consensus 361 ~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~gs 439 (679)
..+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+. |+
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 35789999999998776678999999998643 245678899999987 89999999999999999999999995 69
Q ss_pred HhhhhcccCCCC----CCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCC-------------CcEEEee
Q 005750 440 LRDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSD 502 (679)
Q Consensus 440 L~~~l~~~~~~~----~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~kL~D 502 (679)
|.+++....... ..++..++.++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 999997542111 11333457899999999999999 999999999999999754 4899999
Q ss_pred ccCccccccCccc---ccccccCCccccCCcccCC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhH
Q 005750 503 FGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 571 (679)
Q Consensus 503 fgla~~~~~~~~~---~~~~~~gt~~y~aPE~l~~-------~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~ 571 (679)
||++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||..... ...
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~~-- 248 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS-RES-- 248 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-HHH--
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-hHH--
Confidence 9999876543321 1223468999999999865 678999999999999999999 9999963221 111
Q ss_pred HHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 572 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 572 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
....... .. +.............+.+++.+||+.||.+|||+.||++
T Consensus 249 -~i~~~~~---~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 -NIIRGIF---SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHTCC---CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHhcCCC---Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111100 00 01111123455678999999999999999999999985
No 241
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5e-37 Score=348.17 Aligned_cols=270 Identities=22% Similarity=0.310 Sum_probs=206.6
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC-cchhHHHHHHHHHHHHhccCCCcccccccccc------cce
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQ 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------~~~ 427 (679)
...|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 356888999999999999999875 6899999998764 34456779999999999999999999998765 677
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCc---EEEeecc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFG 504 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kL~Dfg 504 (679)
.++||||+++|+|.+++........+++..++.++.|++.||+|||+ .||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 89999999999999999865545578999999999999999999999 99999999999999997665 9999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 584 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 584 (679)
++........ .....|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ...|..........
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC-----
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccch
Confidence 9987654332 2334689999999999999999999999999999999999999973221 11111111000000
Q ss_pred eeeec----c--------cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH-----HHHHHHhhhhh
Q 005750 585 ISIVD----P--------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIKI 635 (679)
Q Consensus 585 ~~~~d----~--------~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e-----vl~~L~~~~~~ 635 (679)
..... . .............+.+++.+||+.||.+|||++| ..+.++++...
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 0 0112234456778999999999999999999988 45666666554
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=324.41 Aligned_cols=243 Identities=26% Similarity=0.411 Sum_probs=190.6
Q ss_pred HHHHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch------hHHHHHHHHHHHHhc----cCCCccccccc
Q 005750 353 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRI----HHRNLVPLIGY 421 (679)
Q Consensus 353 ~l~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~hpnIv~l~~~ 421 (679)
+.....|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445667888999999999999999875 6899999999654321 223466799999999 89999999999
Q ss_pred ccccceEEEEEEe-cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc-CCCcEE
Q 005750 422 CEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAK 499 (679)
Q Consensus 422 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~k 499 (679)
+...+..++|||+ +.+++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 789999999974 4568999999999999999999999 9999999999999999 899999
Q ss_pred EeeccCccccccCcccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 005750 500 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 578 (679)
Q Consensus 500 L~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 578 (679)
|+|||++....... .....|+..|+|||++.+..+ +.++|||||||++|+|++|+.||.... +.
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~---- 245 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EI---- 245 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HH----
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------HH----
Confidence 99999998765432 233458999999999876655 459999999999999999999997211 10
Q ss_pred HhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 579 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 579 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. ... . ........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~-~~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 LE-AEL------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HH-TCC------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hh-hcc------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000 0 11122346889999999999999999999987
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=317.44 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=178.9
Q ss_pred HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-hh-HHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HR-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~-~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
..|++.+.||+|+||.||+|.+. +|+.||||++..... .. .+.+.++..+++.++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 34667889999999999999986 689999999976432 22 2334455567888899999999999999999999999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 512 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~ 512 (679)
|+ ++.+..+... ....+++..++.++.|++.||.|||+ + +|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 105 LM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 99 5566555542 24578999999999999999999998 6 9999999999999999999999999999765443
Q ss_pred cccccccccCCccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 513 LTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 513 ~~~~~~~~~gt~~y~aPE~l~-----~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
.. .....+++.|+|||++. +..++.++|||||||++|+|++|+.||...... ... ......... ...
T Consensus 179 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~---~~~~~~~~~-~~~ 250 (318)
T 2dyl_A 179 KA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEV---LTKVLQEEP-PLL 250 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHH---HHHHHHSCC-CCC
T ss_pred cc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHH---HHHHhccCC-CCC
Confidence 22 22345899999999984 557889999999999999999999999732221 111 112222111 100
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
.. .......+.+++.+||+.||.+||+++|+++
T Consensus 251 -----~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 -----PG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -----CS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----Cc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0112346889999999999999999999986
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6e-37 Score=322.83 Aligned_cols=240 Identities=24% Similarity=0.377 Sum_probs=196.5
Q ss_pred HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch------hHHHHHHHHHHHHhcc--CCCcccccccccccc
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEH 426 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~ 426 (679)
...|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++ ||||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 345778899999999999999875 6899999998654221 2245678999999996 599999999999999
Q ss_pred eEEEEEEecCC-CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc-CCCcEEEeecc
Q 005750 427 QRILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFG 504 (679)
Q Consensus 427 ~~~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg 504 (679)
..++|||++.+ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999976 899999874 4578999999999999999999999 9999999999999999 78999999999
Q ss_pred CccccccCcccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC
Q 005750 505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 583 (679)
Q Consensus 505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 583 (679)
++....... .....|++.|+|||++.+..+ +.++|||||||++|+|++|+.||.... .. .. +.
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~----~~-~~ 259 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EI----IR-GQ 259 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HH----HH-CC
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------hh----hc-cc
Confidence 998765432 223458999999999876655 788999999999999999999997221 10 11 11
Q ss_pred eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 584 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 584 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
. ..... ....+.+++.+||+.||.+|||++||++
T Consensus 260 ~------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V------FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C------CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01111 2346889999999999999999999987
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=328.88 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=184.6
Q ss_pred HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEEEEecC
Q 005750 358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMH 436 (679)
Q Consensus 358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~ 436 (679)
.|++.+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 4556789999999997766666799999999875432 2356799999999 79999999999999999999999996
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-----CCcEEEeeccCcccccc
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEE 511 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kL~Dfgla~~~~~ 511 (679)
|+|.+++... .....+..++.++.||+.||+|||+ ++|+||||||+|||++. ...+||+|||++.....
T Consensus 102 -g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 -ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp -EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred -CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 6999999753 2334455667899999999999999 99999999999999953 33588999999987654
Q ss_pred Ccc--cccccccCCccccCCcccC---CCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750 512 DLT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 585 (679)
Q Consensus 512 ~~~--~~~~~~~gt~~y~aPE~l~---~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (679)
... .......||+.|+|||++. ...++.++|||||||++|+|++ |..||..... .. .. ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-~~---~~---~~~~~~~~- 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-RQ---AN---ILLGACSL- 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-HH---HH---HHTTCCCC-
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-HH---HH---HHhccCCc-
Confidence 321 1223456999999999997 4567889999999999999999 9999962221 11 11 11111110
Q ss_pred eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... .........+.+++.+||+.||.+|||++||++
T Consensus 248 ~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 DCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000 111233446789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.6e-35 Score=304.20 Aligned_cols=236 Identities=14% Similarity=0.189 Sum_probs=184.3
Q ss_pred HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750 355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 430 (679)
....|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 3445778899999999999999986 489999999976432 334778999999999999999999999999999999
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||++|++|.++++. . ....++..++.|++.||+|||+ +||+||||||+|||++.++.+||++++
T Consensus 109 v~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999999863 2 3556788999999999999999 999999999999999999999998443
Q ss_pred cCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 590 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 590 (679)
|++ .++.++|||||||++|+|++|+.||...+........ .... .+.. ..+
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~~---~~~ 225 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQP---IEP 225 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSCB---CCH
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccCC---CCh
Confidence 333 3689999999999999999999999844332100000 0000 0000 000
Q ss_pred cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750 591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 637 (679)
Q Consensus 591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 637 (679)
.......+..+.+++.+||+.||.+| |+.|+++.|+++.....
T Consensus 226 ---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 226 ---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp ---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred ---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00011233468899999999999999 99999999999887544
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-35 Score=344.12 Aligned_cols=241 Identities=18% Similarity=0.291 Sum_probs=194.3
Q ss_pred HHHHhhccccCcCccEEEEEEEEc--CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccce-----
Q 005750 356 EATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----- 427 (679)
Q Consensus 356 ~~~~~~~~~LG~G~~g~Vy~a~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----- 427 (679)
...|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 356788899999999999999986 58999999986543 3445678999999999999999999999987655
Q ss_pred EEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 428 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 428 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
.|+||||+++++|.+++. ..+++..++.++.||+.||.|||+ +||+||||||+|||++.+ .+||+|||++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccch
Confidence 799999999999988765 268999999999999999999999 999999999999999875 89999999998
Q ss_pred ccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750 508 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 587 (679)
Q Consensus 508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (679)
..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.......
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------------------- 283 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-------------------- 283 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------------
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc--------------------
Confidence 76543 3345899999999987654 899999999999999999998886321110
Q ss_pred ecccccCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhh
Q 005750 588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIK 634 (679)
Q Consensus 588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~~ 634 (679)
.............+.+++.+||+.||.+|| +++++.+.|.....
T Consensus 284 ---~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 284 ---LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ---CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ---ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 000000112234688999999999999999 56677777776543
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.4e-35 Score=314.44 Aligned_cols=243 Identities=19% Similarity=0.234 Sum_probs=187.3
Q ss_pred HHHHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCc--------chhHHHHHHHHHHHHhcc--------------
Q 005750 354 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIH-------------- 411 (679)
Q Consensus 354 l~~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~-------------- 411 (679)
+....|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|+++++.++
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4456788999999999999999998 68999999997542 223477889999999886
Q ss_pred ------------CCCcccccccccc-------------cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHH
Q 005750 412 ------------HRNLVPLIGYCEE-------------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA 466 (679)
Q Consensus 412 ------------hpnIv~l~~~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia 466 (679)
||||+++++++.+ .+..++||||+++|++.+.+. ...+++..++.++.||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHH
Confidence 6666777776664 778999999999998777664 35689999999999999
Q ss_pred HHHHHHH-hcCCCCccccCCCCCCccccCCC--------------------cEEEeeccCccccccCcccccccccCCcc
Q 005750 467 KGLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 525 (679)
Q Consensus 467 ~aL~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfgla~~~~~~~~~~~~~~~gt~~ 525 (679)
.||+||| + ++|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 9999999999999999887 8999999999876532 2358999
Q ss_pred ccCCcccCCCCCCchhHHHHHHHH-HHHHHhCCCCCCcccccchhhHHHHH-HHhHhcCCeeeeecccccCCCCHHHHHH
Q 005750 526 YLDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWA-RSMIKKGDVISIVDPVLIGNVKIESIWR 603 (679)
Q Consensus 526 y~aPE~l~~~~~s~ksDVwSlGvl-l~elltG~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 603 (679)
|+|||++.+.. +.++||||+|++ .+++++|..||... ...... .......... ..............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHH
Confidence 99999998766 899999998777 77889999998511 000111 1111111110 00011112345678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHH
Q 005750 604 IAEVAIQCVEQRGFSRPKMQEIV 626 (679)
Q Consensus 604 l~~li~~cl~~dP~~RPt~~evl 626 (679)
+.+++.+||+.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999976 899987
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.3e-34 Score=299.92 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=176.0
Q ss_pred Hhhc-cccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHH-HhccCCCcccccccccc----cceEEEE
Q 005750 359 NNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILV 431 (679)
Q Consensus 359 ~~~~-~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~l~~~~~~----~~~~~lV 431 (679)
|.+. +.||+|+||.||+|... +++.||+|++... ..+.+|++++ +.++||||+++++++.. ....++|
T Consensus 19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 4444 77999999999999875 6899999998642 4567888888 55589999999999876 7788999
Q ss_pred EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCccc
Q 005750 432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 508 (679)
Q Consensus 432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~~ 508 (679)
|||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++..
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 94 MECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp ECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 9999999999999854 24579999999999999999999999 99999999999999997 78899999998864
Q ss_pred cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750 509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (679)
.. +..++.++|||||||++|+|++|+.||........ .........
T Consensus 170 ~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~ 215 (299)
T 3m2w_A 170 TT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIR 215 (299)
T ss_dssp CT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSC
T ss_pred cc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHh
Confidence 32 23467899999999999999999999973321100 000000000
Q ss_pred cccccCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 589 DPVLIGNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 589 d~~l~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
... ...+ ......+.+++.+||+.||.+|||++|+++
T Consensus 216 ~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 216 MGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000 0011 122457889999999999999999999987
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.4e-35 Score=317.83 Aligned_cols=239 Identities=15% Similarity=0.100 Sum_probs=179.3
Q ss_pred HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHHHHHHHHhccC-CCccccccc------------
Q 005750 359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHH-RNLVPLIGY------------ 421 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-pnIv~l~~~------------ 421 (679)
+...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|......+
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 344678999999999999965 699999999874322 235779999999999976 332221111
Q ss_pred ---------ccc-----cceEEEEEEecCCCcHhhhhccc----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 005750 422 ---------CEE-----EHQRILVYEYMHNGTLRDRLHGS----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHR 483 (679)
Q Consensus 422 ---------~~~-----~~~~~lV~E~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~ 483 (679)
+.. ....+++|+++ +++|.++++.. .....+++..++.++.|+++||+|||+ ++|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHr 235 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHT 235 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECS
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccC
Confidence 111 12356677765 68999888421 124568888999999999999999999 999999
Q ss_pred CCCCCCccccCCCcEEEeeccCccccccCcccccccccCCccccCCccc----------CCCCCCchhHHHHHHHHHHHH
Q 005750 484 DVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLEL 553 (679)
Q Consensus 484 Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l----------~~~~~s~ksDVwSlGvll~el 553 (679)
||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999998875543 233457 999999998 666789999999999999999
Q ss_pred HhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750 554 ISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 627 (679)
Q Consensus 554 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 627 (679)
++|+.||........ .+..+... ...+..+.+++.+||+.||.+||++.|+++
T Consensus 311 ltg~~Pf~~~~~~~~-------------------~~~~~~~~--~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 311 WCADLPNTDDAALGG-------------------SEWIFRSC--KNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHSSCCCCTTGGGSC-------------------SGGGGSSC--CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHCCCCCCCcchhhh-------------------HHHHHhhc--ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999974332111 00011100 011256889999999999999999887754
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=5.7e-29 Score=281.21 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=132.3
Q ss_pred cccCcCccEEEEEEEEc-CCcEEEEEEecCCc----------chhHHHHHHHHHHHHhc-cCCCcccccccccccceEEE
Q 005750 363 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 430 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~l 430 (679)
...+.|+.|.+..++.. .|+.+++|++.... ....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 45677787777766433 58999999996531 12346799999999999 79999999999999999999
Q ss_pred EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccc
Q 005750 431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 510 (679)
Q Consensus 431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~ 510 (679)
||||++|++|.+++.. ..+++.. +|+.||+.||+|+|+ +|||||||||+|||++.++++||+|||+|+...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999984 4566654 578999999999999 999999999999999999999999999998765
Q ss_pred cCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005750 511 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 560 (679)
Q Consensus 511 ~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf 560 (679)
..... ....+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 54332 233469999999999976 4677899999999988876665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.1e-25 Score=249.22 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=145.4
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcc--------hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E 433 (679)
.+.||+|+||.||+|... ++.+++|+...... ...+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999544 78899988643211 123558999999999999999976666667777899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 513 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~ 513 (679)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999873 46899999999999999 99999999999999998 99999999999875532
Q ss_pred ccc------cccccCCccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005750 514 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 561 (679)
Q Consensus 514 ~~~------~~~~~gt~~y~aPE~l~~--~~~s~ksDVwSlGvll~elltG~~pf~ 561 (679)
... .....||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 234568999999999976 567888999999998888887777663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.7e-22 Score=206.77 Aligned_cols=141 Identities=15% Similarity=0.113 Sum_probs=115.7
Q ss_pred hccccCcCccEEEEEEEEcCCcEEEEEEecCCcc------------------hhHHHHHHHHHHHHhccCCCcccccccc
Q 005750 361 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 422 (679)
Q Consensus 361 ~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 422 (679)
+.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 4589999999999999997799999999864321 13467899999999999 5 7777765
Q ss_pred cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEee
Q 005750 423 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 502 (679)
Q Consensus 423 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 502 (679)
.. +..++||||++||+|.+ +.. .....++.|++.||.|||+ +||+||||||+|||++ ++.+||+|
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred ec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 44 55699999999999988 431 1234699999999999999 9999999999999999 99999999
Q ss_pred ccCccccccCcccccccccCCccccCCcccC
Q 005750 503 FGLSRQAEEDLTHISSVARGTVGYLDPEYYG 533 (679)
Q Consensus 503 fgla~~~~~~~~~~~~~~~gt~~y~aPE~l~ 533 (679)
||++.. +..+.|||++.
T Consensus 236 FG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHH
Confidence 999863 34567888763
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=8.8e-19 Score=178.10 Aligned_cols=135 Identities=23% Similarity=0.246 Sum_probs=105.2
Q ss_pred hhccccCcCccEEEEEEEE-cCCcE--EEEEEecCCcch------------------------hHHHHHHHHHHHHhccC
Q 005750 360 NFCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHH 412 (679)
Q Consensus 360 ~~~~~LG~G~~g~Vy~a~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~h 412 (679)
.+.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|++++.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999999999998 67999 999997543111 12367899999999988
Q ss_pred CCc--ccccccccccceEEEEEEecCC-C----cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCccccC
Q 005750 413 RNL--VPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRD 484 (679)
Q Consensus 413 pnI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH-~~~~~~ivH~D 484 (679)
+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| + .||+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 864 333332 356899999942 4 66665432 234456789999999999999 8 9999999
Q ss_pred CCCCCccccCCCcEEEeeccCcccc
Q 005750 485 VKSSNILLDINMRAKVSDFGLSRQA 509 (679)
Q Consensus 485 lkp~NIll~~~~~~kL~Dfgla~~~ 509 (679)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999988 9999999999764
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.71 E-value=1.5e-17 Score=173.90 Aligned_cols=150 Identities=27% Similarity=0.496 Sum_probs=128.5
Q ss_pred CchhHHHHHHHHHhhcCC-CCCCCCCC-CCCCCCCCceEEEeCCC-CCceEEEEcCCCcccc--cCCccccCCCCCCEEE
Q 005750 117 TEWQDVMVLEALRSISDE-SERTNDRG-DPCVPVPWEWVTCSTTT-PPRITKIALSGKNLKG--EIPPELKNMEALTELW 191 (679)
Q Consensus 117 t~~~~~~~l~~l~~~~~~-~~~~~w~~-~~c~~~~w~~~~c~~~~-~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~ 191 (679)
..++|..+|.++|..... ....+|.. .+||.+.|.||+|+... ..+|+.|+|++|+++| .+|+.|+++++|++|+
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 457899999999998843 24557864 34444569999997642 2699999999999999 9999999999999999
Q ss_pred CCC-CcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCC
Q 005750 192 LDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 192 L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~ 266 (679)
|++ |.+.+.+| .|+++++|++|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+.. .+..+.+++|..
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 995 99999988 5999999999999999999999999999999999999999999999987754 556777888764
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=4e-16 Score=183.38 Aligned_cols=158 Identities=20% Similarity=0.243 Sum_probs=130.4
Q ss_pred eeeeeeeeeeccC---CCchhHHHHHHHHHhhcCCCCCCCCCCCC------CCCCCC------------ceEEEeCCCCC
Q 005750 103 NAIEISKYQKIAA---KTEWQDVMVLEALRSISDESERTNDRGDP------CVPVPW------------EWVTCSTTTPP 161 (679)
Q Consensus 103 na~e~~~~~~~~~---~t~~~~~~~l~~l~~~~~~~~~~~w~~~~------c~~~~w------------~~~~c~~~~~~ 161 (679)
|+++-.+.+|+.. .+..+|..||.++|+..... +|+.+. |+.|.| .||+|++. .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~--~ 323 (876)
T 4ecn_A 249 NKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN--G 323 (876)
T ss_dssp TSEEEEEEEEECCCCCCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT--S
T ss_pred cccccccccceeccccccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCC--C
Confidence 4446666777653 34458999999999987543 665322 223689 99999873 6
Q ss_pred ceEEEEcCCCcccccCCccccCCCCCCEEEC-CCCcCCCC----------------------------------------
Q 005750 162 RITKIALSGKNLKGEIPPELKNMEALTELWL-DGNFLTGP---------------------------------------- 200 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L-~~N~l~~~---------------------------------------- 200 (679)
+|+.|+|++|+|+|.+|++|++|++|+.|+| ++|.++|.
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 9999999999999999999999999999999 88765544
Q ss_pred ------------------------------------CC-CCCCCCCCcEEEecCccCCC-----------------CCCC
Q 005750 201 ------------------------------------LP-DMSRLIDLRIVHLENNELTG-----------------SLPS 226 (679)
Q Consensus 201 ------------------------------------~p-~~~~l~~L~~L~l~~N~l~g-----------------~~p~ 226 (679)
+| +|++|++|+.|+|++|+|+| .+|.
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~ 483 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE 483 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh
Confidence 56 59999999999999999998 4999
Q ss_pred CCC--CCCccceecccccCCCCCCCccccC--CceeeeecCCC
Q 005750 227 YMG--SLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 227 ~~~--~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~ 265 (679)
.++ +|++|++|+|++|++.|.+|..+.. .+..+.+++|.
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 998 9999999999999999999987764 56778888886
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.7e-16 Score=168.12 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=98.5
Q ss_pred HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc--------------hhHHH--------HHHHHHHHHhccCCCcc
Q 005750 359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------------HRTQQ--------FVTEVALLSRIHHRNLV 416 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~hpnIv 416 (679)
|.+.+.||+|++|.||+|...+|+.||||+++.... ..... ..+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 556789999999999999999999999999753210 00111 23455556665443332
Q ss_pred cccccccccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC
Q 005750 417 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 496 (679)
Q Consensus 417 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 496 (679)
...-+ . ....++||||++|++|.++... .....++.|++.+|.+||+ .|||||||||.|||+++++
T Consensus 177 vp~p~-~-~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPI-A-QSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEE-E-EETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeee-e-ccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 11111 1 1234799999999998765431 1235678999999999999 9999999999999998776
Q ss_pred ----------cEEEeeccCccccc
Q 005750 497 ----------RAKVSDFGLSRQAE 510 (679)
Q Consensus 497 ----------~~kL~Dfgla~~~~ 510 (679)
.+.|+||+.+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38999999776543
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.63 E-value=4.4e-16 Score=178.83 Aligned_cols=146 Identities=18% Similarity=0.240 Sum_probs=122.5
Q ss_pred CCchhHHHHHHHHHhhcCCCCCC----------CCCCCCCCCCCC---ceEEEeCCCCCceEEEEcCCCcccccCCcccc
Q 005750 116 KTEWQDVMVLEALRSISDESERT----------NDRGDPCVPVPW---EWVTCSTTTPPRITKIALSGKNLKGEIPPELK 182 (679)
Q Consensus 116 ~t~~~~~~~l~~l~~~~~~~~~~----------~w~~~~c~~~~w---~~~~c~~~~~~~l~~L~L~~n~l~g~~p~~~~ 182 (679)
.....|..||.+++.......+. +|..+. .+|.| .||+|+.. ++|+.|+|++|+++|.+|++|+
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~-~~c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNK-ELDMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSS-CGGGTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCC-CcccccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHh
Confidence 34457999999999876543222 676432 12479 99999865 6999999999999999999999
Q ss_pred CCCCCCEEECCCCc------------------------------------------------------------------
Q 005750 183 NMEALTELWLDGNF------------------------------------------------------------------ 196 (679)
Q Consensus 183 ~l~~L~~L~L~~N~------------------------------------------------------------------ 196 (679)
+|++|+.|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999994
Q ss_pred ------------CCCCCC-CCCCCCCCcEEEecCccCCCC-----------------CCCCCC--CCCccceecccccCC
Q 005750 197 ------------LTGPLP-DMSRLIDLRIVHLENNELTGS-----------------LPSYMG--SLPNLQELHIENNSF 244 (679)
Q Consensus 197 ------------l~~~~p-~~~~l~~L~~L~l~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l 244 (679)
|+| +| +|+++++|+.|+|++|+|+|. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 445 56 599999999999999999986 999999 999999999999999
Q ss_pred CCCCCccccC--CceeeeecCCC
Q 005750 245 VGEIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 245 ~g~ip~~~~~--~~~~~~~~~n~ 265 (679)
.|.+|..+.. .+..+.+++|.
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCT
T ss_pred CccChHHHhcCCCCCEEECcCCC
Confidence 9999988764 55777888886
No 259
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=5.8e-15 Score=142.94 Aligned_cols=121 Identities=23% Similarity=0.304 Sum_probs=106.1
Q ss_pred CCCceEEEeCC--------CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCc
Q 005750 148 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 218 (679)
Q Consensus 148 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N 218 (679)
|.|..+.|+.. .+.+|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++.++ .|.+|++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666777643 2457999999999999 899999999999999999999999988 4999999999999999
Q ss_pred cCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 219 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 219 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|++..|..|..+++|+.|+|++|+|+ .+|...+. .+..+.+.+||+.|++
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 999777788999999999999999999 77776543 4577899999999975
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.56 E-value=6.1e-15 Score=142.65 Aligned_cols=123 Identities=19% Similarity=0.214 Sum_probs=106.9
Q ss_pred CCCceEEEeCCC--------CCceEEEEcCCCcccccCCc-cccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750 148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 217 (679)
Q Consensus 148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 217 (679)
|.|..+.|+... +.+|+.|+|++|+|++..+. .|+++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 568888887532 34899999999999966654 49999999999999999999988 599999999999999
Q ss_pred ccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCCcccc
Q 005750 218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~~ 270 (679)
|+|++..|..|..+++|++|+|++|+|++.+|..+.. .+..+.+++|++.|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999888888999999999999999999777776643 5678899999999864
No 261
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.55 E-value=1.9e-15 Score=177.34 Aligned_cols=111 Identities=32% Similarity=0.436 Sum_probs=102.6
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+++|.+|..|++|++|+.|+|++|+|+|.+| +|++|++|+.|||++|+|+|.+|..++.+++|++|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 4579999999999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccc-cCCceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~-~~~~~~~~~~~n~~~~~~ 270 (679)
|++|+|+|.||..- +......++.|||++|+.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999753 344456678999999974
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.55 E-value=1.8e-14 Score=143.44 Aligned_cols=108 Identities=23% Similarity=0.344 Sum_probs=84.4
Q ss_pred CCCCCCCCCCceEEEeCC--------CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCc
Q 005750 141 RGDPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR 211 (679)
Q Consensus 141 ~~~~c~~~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~ 211 (679)
....| .|.++.|+.. .+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|+
T Consensus 15 ~~~~C---s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 15 SQCSC---SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp TTCEE---ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEE---eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 33455 6999999763 245788999999999987788888888888888888888877764 78888888
Q ss_pred EEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccc
Q 005750 212 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL 252 (679)
Q Consensus 212 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~ 252 (679)
.|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 131 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI 131 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCccc
Confidence 8888888888555555777777777777777777 677655
No 263
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.3e-14 Score=136.46 Aligned_cols=126 Identities=20% Similarity=0.307 Sum_probs=107.6
Q ss_pred CCCCCCCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEE
Q 005750 143 DPCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 213 (679)
Q Consensus 143 ~~c~~~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L 213 (679)
+.| .|.|.++.|+... +++|+.|+|++|++++..+..|+++++|++|+|++|+|++.++. |.++++|+.|
T Consensus 3 ~~C-~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRC-SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTC-EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCC-EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 345 3679999997632 45899999999999976667789999999999999999998885 8999999999
Q ss_pred EecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 214 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 214 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|++|+|++..|..+..+++|+.|+|++|+|+ .+|...+. .+..+.+++|++.|..
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999999766667899999999999999999 67776543 4577889999998754
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.50 E-value=4.7e-14 Score=139.50 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=99.4
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 46899999999999987788999999999999999999999985 99999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~~ 270 (679)
|++|+|++..|..+.. .+..+.+++||+.|++
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9999999655665543 5577899999999864
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.50 E-value=6.8e-14 Score=138.33 Aligned_cols=110 Identities=20% Similarity=0.286 Sum_probs=95.9
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 35899999999999988899999999999999999999988875 78999999999999999988888999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
|++|+|+ .+|...+. .+..+.+.+||+.|++
T Consensus 135 L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 135 LYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCC-EECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999999 55554333 4567889999999864
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.44 E-value=2.2e-14 Score=150.87 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=117.7
Q ss_pred CchhHHHHHHHHHhhcC--C-CCCCCCC---CCCCCCCCCceEEEeC-------CCCCceEEEEcCCCcccccCCccccC
Q 005750 117 TEWQDVMVLEALRSISD--E-SERTNDR---GDPCVPVPWEWVTCST-------TTPPRITKIALSGKNLKGEIPPELKN 183 (679)
Q Consensus 117 t~~~~~~~l~~l~~~~~--~-~~~~~w~---~~~c~~~~w~~~~c~~-------~~~~~l~~L~L~~n~l~g~~p~~~~~ 183 (679)
...++..+|.+||.... . .+...|. ...-..|.|.|++|.. ...++|+.|+|++|+++ .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 44578899999998652 1 2334662 1111123799999952 23468999999999999 89999999
Q ss_pred CCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCcccc----------
Q 005750 184 MEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---------- 253 (679)
Q Consensus 184 l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~---------- 253 (679)
|++|++|+|++|.|+..+..++++++|+.|+|++|+|+ .+|..++.+++|++|+|++|++.|.+|..+.
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 99999999999999944446999999999999999999 9999999999999999999999999999873
Q ss_pred -CCceeeeecCCC
Q 005750 254 -TGKVIFKYDNNP 265 (679)
Q Consensus 254 -~~~~~~~~~~n~ 265 (679)
..+..+.+++|.
T Consensus 182 l~~L~~L~L~~n~ 194 (328)
T 4fcg_A 182 LVNLQSLRLEWTG 194 (328)
T ss_dssp STTCCEEEEEEEC
T ss_pred CCCCCEEECcCCC
Confidence 345556666664
No 267
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=2.7e-13 Score=128.32 Aligned_cols=104 Identities=27% Similarity=0.332 Sum_probs=88.5
Q ss_pred eEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750 163 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 241 (679)
Q Consensus 163 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 241 (679)
.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 357999999999 6887774 8999999999999999884 99999999999999999966566689999999999999
Q ss_pred cCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 242 NSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 242 N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
|+|+ .+|+..+. .+..+.+++||+.|.+
T Consensus 88 N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999 66665433 5578889999999865
No 268
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.43 E-value=1e-13 Score=162.59 Aligned_cols=131 Identities=19% Similarity=0.324 Sum_probs=85.4
Q ss_pred CCchhHHHHHHHHHhhcCCC-CCCCCCC-CCCCCCCCceEEEeCCCCCceEEEEcCCCccccc---CCccccCCCCCCEE
Q 005750 116 KTEWQDVMVLEALRSISDES-ERTNDRG-DPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGE---IPPELKNMEALTEL 190 (679)
Q Consensus 116 ~t~~~~~~~l~~l~~~~~~~-~~~~w~~-~~c~~~~w~~~~c~~~~~~~l~~L~L~~n~l~g~---~p~~~~~l~~L~~L 190 (679)
....+|..||.++|+...+. ...+|.. ..| |.|.||+|+ .++|+.|+|+++++.|. +|+.|++|+.|+.+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~--C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKNLLPDWSSNKNP--CTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCG--GGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCCCcccccCCCCCCCC--cCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 44568999999999877533 4668863 333 379999998 36999999999999998 77666555555555
Q ss_pred ECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCC--CCCCCCccceecccccCCCCCCCcc
Q 005750 191 WLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHIENNSFVGEIPPA 251 (679)
Q Consensus 191 ~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~ip~~ 251 (679)
+++.|.+...++.|+++++|++|+|++|+++|.+|. .++++++|++|+|++|.++|.+|..
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 145 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVS 145 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHH
Confidence 555555444333455555555555555555555555 5555555555555555555555543
No 269
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=5.2e-13 Score=126.85 Aligned_cols=103 Identities=22% Similarity=0.345 Sum_probs=89.2
Q ss_pred EEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccccc
Q 005750 164 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 242 (679)
Q Consensus 164 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 242 (679)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67999999997 8898775 899999999999999988 5999999999999999999644455789999999999999
Q ss_pred CCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 243 SFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 243 ~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|+ .+|+..+. .+..+.+.+|++.|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 999 67776433 5577889999999864
No 270
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=3.6e-13 Score=127.44 Aligned_cols=102 Identities=23% Similarity=0.272 Sum_probs=89.8
Q ss_pred CCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCc
Q 005750 148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 218 (679)
Q Consensus 148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N 218 (679)
|.|+.+.|+... +.+|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 567778886532 35789999999999988899999999999999999999999886 799999999999999
Q ss_pred cCCCCCCCCCCCCCccceecccccCCCCCCC
Q 005750 219 ELTGSLPSYMGSLPNLQELHIENNSFVGEIP 249 (679)
Q Consensus 219 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip 249 (679)
+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9996666679999999999999999985443
No 271
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.41 E-value=7.6e-13 Score=129.32 Aligned_cols=121 Identities=23% Similarity=0.356 Sum_probs=94.6
Q ss_pred CCCCCCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEE
Q 005750 144 PCVPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVH 214 (679)
Q Consensus 144 ~c~~~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 214 (679)
.| .|.|.++.|+... +++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+
T Consensus 4 ~C-~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RC-SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TC-EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CC-EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 45 4689999997632 45789999999999966666788999999999999999988775 78899999999
Q ss_pred ecCccCCCCCCCCCCCCCccceecccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 215 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 215 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
|++|+|++..+..++.+++|++|+|++|+++ .+|+..+ ..+..+.+++|..
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCcc
Confidence 9999999555556788999999999999998 5555433 2445666677654
No 272
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.40 E-value=8.2e-13 Score=136.30 Aligned_cols=110 Identities=27% Similarity=0.340 Sum_probs=97.4
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 46899999999999977778899999999999999999999885 89999999999999999944444578899999999
Q ss_pred ccccCCCCCCCccccCC--ceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPALLTG--KVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~--~~~~~~~~n~~~~~~ 270 (679)
|++|+|+ .+|..++.. +..+.+.+|||.|++
T Consensus 179 L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9999999 899988764 567889999999974
No 273
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.38 E-value=1.1e-12 Score=129.71 Aligned_cols=121 Identities=21% Similarity=0.201 Sum_probs=100.0
Q ss_pred CCCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750 147 PVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 217 (679)
Q Consensus 147 ~~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 217 (679)
.|.|..+.|+... +.+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..| .|.++++|+.|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 3568888887532 3579999999999997777799999999999999999999988 599999999999999
Q ss_pred ccCCCCCCCCCCCCCccceecccccCCCCCCCcccc--CCceeeeecCCCCc
Q 005750 218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 267 (679)
|+|++..+..|..+++|+.|+|++|+|++..|..+. ..+..+.+++|...
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 999944444578999999999999999955555443 24567788888654
No 274
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.37 E-value=4.6e-13 Score=148.56 Aligned_cols=107 Identities=21% Similarity=0.188 Sum_probs=84.4
Q ss_pred CCceEEEEcCCCcccccCCcccc-CCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++.+|..+. +|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|++ +|..++.+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 35788888888888887777776 788888888888888877 444468888889999998884 555688888999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCccc
Q 005750 239 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 269 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~ 269 (679)
|++|+|+ .+|..+.. .+..+.+++|++.|+
T Consensus 221 Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 9999998 57776543 456778889988875
No 275
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.36 E-value=2.4e-12 Score=129.75 Aligned_cols=109 Identities=20% Similarity=0.266 Sum_probs=95.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 46899999999999977777899999999999999999999886 89999999999999999966666899999999999
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCCccc
Q 005750 239 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHK 269 (679)
Q Consensus 239 l~~N~l~g~ip~~~~---~~~~~~~~~~n~~~~~ 269 (679)
|++|+|+ .+|+..+ ..+..+.+.+|++.|.
T Consensus 162 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999 5555433 2557889999999885
No 276
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=6.1e-13 Score=140.76 Aligned_cols=102 Identities=21% Similarity=0.246 Sum_probs=90.4
Q ss_pred EEcCCC-cccccCCccccCCCCCCEEECCC-CcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccccc
Q 005750 166 IALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 242 (679)
Q Consensus 166 L~L~~n-~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 242 (679)
++++++ +|+ .+|. |..+++|+.|+|++ |+|++.+| .|++|++|+.|+|++|+|+|..|..|++|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 466676 888 6888 99999999999996 99999998 5999999999999999999888889999999999999999
Q ss_pred CCCCCCCccccCC--ceeeeecCCCCcccc
Q 005750 243 SFVGEIPPALLTG--KVIFKYDNNPKLHKE 270 (679)
Q Consensus 243 ~l~g~ip~~~~~~--~~~~~~~~n~~~~~~ 270 (679)
+|+ .+|+..+.. +..+.+.+|++.|++
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 999 788777654 577889999999874
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.36 E-value=1.7e-13 Score=143.07 Aligned_cols=109 Identities=26% Similarity=0.307 Sum_probs=97.8
Q ss_pred ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750 162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 241 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 241 (679)
.|+.|+|++|.+++.+|..|.++++|+.|+|++|.+++.+|.+..+++|+.|+|++|+|+|.+|..++.+++|+.|+|++
T Consensus 198 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 277 (313)
T 1ogq_A 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcC
Confidence 38899999999998889999999999999999999999998899999999999999999999999999999999999999
Q ss_pred cCCCCCCCccc-cCCceeeeecCCCCcccc
Q 005750 242 NSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 242 N~l~g~ip~~~-~~~~~~~~~~~n~~~~~~ 270 (679)
|+++|.+|... ...+..+.+.+||++|+.
T Consensus 278 N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 278 NNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CcccccCCCCccccccChHHhcCCCCccCC
Confidence 99999999862 224466788999999974
No 278
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.35 E-value=3.2e-12 Score=124.88 Aligned_cols=110 Identities=20% Similarity=0.267 Sum_probs=95.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 36899999999999966666789999999999999999998885 89999999999999999966666789999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
|++|+++ .+|...+. .+..+.+++|++.|..
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999999 56665433 5577889999998754
No 279
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.34 E-value=1.7e-12 Score=128.22 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=101.0
Q ss_pred CCCceEEEeCCC--------CCceEEEEcCCCcccccCCc-cccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750 148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 217 (679)
Q Consensus 148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 217 (679)
|.|..+.|+... +..++.|+|++|+|++..|. .|.++++|+.|+|++|+|++.++ .|.++++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 567888887532 34678999999999977664 58999999999999999999998 699999999999999
Q ss_pred ccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750 218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~ 267 (679)
|+|++..|..|..+++|++|+|++|+|++..|..+.. .+..+.+++|...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 142 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC
Confidence 9999777778999999999999999999665665543 4567788888644
No 280
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.34 E-value=1.2e-12 Score=126.50 Aligned_cols=91 Identities=22% Similarity=0.341 Sum_probs=86.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++.+|..+..+++|++|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999998899999999999999999999999985 99999999999999999999999999999999999
Q ss_pred ccccCCCCCCCc
Q 005750 239 IENNSFVGEIPP 250 (679)
Q Consensus 239 l~~N~l~g~ip~ 250 (679)
|++|.+++..+-
T Consensus 133 L~~N~l~c~c~l 144 (192)
T 1w8a_A 133 LASNPFNCNCHL 144 (192)
T ss_dssp CTTCCBCCSGGG
T ss_pred eCCCCccCcCcc
Confidence 999999987664
No 281
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=3.2e-12 Score=121.40 Aligned_cols=90 Identities=19% Similarity=0.272 Sum_probs=81.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+.+|+.|+|++|+|++..|..|++|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 45789999999999988899999999999999999999999886 79999999999999999955555699999999999
Q ss_pred ccccCCCCCCCc
Q 005750 239 IENNSFVGEIPP 250 (679)
Q Consensus 239 l~~N~l~g~ip~ 250 (679)
|++|.+. ..|.
T Consensus 112 L~~N~~~-c~~~ 122 (174)
T 2r9u_A 112 LYNNPWD-CECR 122 (174)
T ss_dssp CCSSCBC-TTBG
T ss_pred eCCCCcc-cccc
Confidence 9999998 4444
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.33 E-value=4.7e-12 Score=129.23 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=96.6
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|++++..|..|+++++|+.|+|++|+|++.++. +.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 46899999999999977777799999999999999999999885 79999999999999999977777789999999999
Q ss_pred ccccCCCCCCCcccc--CCceeeeecCCCCccccc
Q 005750 239 IENNSFVGEIPPALL--TGKVIFKYDNNPKLHKES 271 (679)
Q Consensus 239 l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~~~~ 271 (679)
|++|++++..|..+. ..+..+.+.+|++.|..+
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999954443332 356788999999988643
No 283
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.33 E-value=1.3e-12 Score=137.35 Aligned_cols=108 Identities=16% Similarity=0.236 Sum_probs=90.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|+++ .+|..++++++|+.|+|++|.|++.++.++++++|+.|+|++|++.+.+|..++.+++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 457889999999988 8888899999999999999999987778888999999999999888889988889999999999
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPPALLT--GKVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~ 268 (679)
++|++.+.+|..+.. .+..+.+++|+...
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 998888888887653 45677778876543
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.33 E-value=5.1e-12 Score=128.83 Aligned_cols=111 Identities=22% Similarity=0.282 Sum_probs=98.0
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..|..|.++++|+.|+|++|.|++.++. |.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 108 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 46899999999999987778899999999999999999998885 89999999999999999966666799999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCccccc
Q 005750 239 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 271 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~~ 271 (679)
|++|+++ .+|...+. .+..+.+.+||+.|++.
T Consensus 188 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 188 LDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999999 67766443 45778999999999753
No 285
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.32 E-value=2.4e-12 Score=147.05 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=99.0
Q ss_pred CCceEEEEcCCCccc-ccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
.+.++.|+|++|++. +.+|..|..+++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..|..|+.+++|++|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 468999999999854 4578889999999999999999999998 59999999999999999998888889999999999
Q ss_pred cccccCCCCCCCcccc---CCceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALL---TGKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~~~~~~ 271 (679)
+|++|+|++..|..+. ..+..+.+++||+.|++.
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999976676654 346778999999999863
No 286
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.29 E-value=3.1e-12 Score=136.30 Aligned_cols=108 Identities=21% Similarity=0.269 Sum_probs=56.1
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCC----CCCCccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYM----GSLPNLQ 235 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~----~~l~~L~ 235 (679)
++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..| .|.++++|+.|+|++|+|+ .+|..+ ..+++|+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCC
Confidence 455555555555554444445555555555555555555544 3555555555555555555 344332 3455555
Q ss_pred eecccccCCCCCCCccccCCc-----eeeeecCCCCcccc
Q 005750 236 ELHIENNSFVGEIPPALLTGK-----VIFKYDNNPKLHKE 270 (679)
Q Consensus 236 ~L~l~~N~l~g~ip~~~~~~~-----~~~~~~~n~~~~~~ 270 (679)
.|+|++|+|+ .+|...+... ..+.+.+||+.|++
T Consensus 167 ~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 167 LLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp EEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred EEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 5555555555 4443222111 23567777777764
No 287
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.28 E-value=7.1e-12 Score=127.74 Aligned_cols=127 Identities=22% Similarity=0.339 Sum_probs=93.3
Q ss_pred CCCCCCCCC-CCCceEEEeCC--------CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCC
Q 005750 139 NDRGDPCVP-VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLI 208 (679)
Q Consensus 139 ~w~~~~c~~-~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~ 208 (679)
.|.|..|.. ..|..+.|+.. .++.++.|+|++|++++..+..|.++++|++|+|++|.|+..++. |.+++
T Consensus 6 ~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~ 85 (270)
T 2o6q_A 6 KKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK 85 (270)
T ss_dssp GGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCT
T ss_pred CCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCC
Confidence 455555522 23455666532 134688999999999866666889999999999999999887775 68899
Q ss_pred CCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 209 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 209 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
+|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|+..+ ..+..+.+++|..
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcC
Confidence 9999999999998655566788999999999999998 4555433 2456667777643
No 288
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.27 E-value=3.3e-12 Score=120.21 Aligned_cols=105 Identities=22% Similarity=0.267 Sum_probs=89.9
Q ss_pred CCceEEEEcCCCccc-ccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.|++. +.+.++++|+.|+|++|++++.+|..+..+++|++|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 88999999999999999999999988 7799999999999999999977888888899999999
Q ss_pred ccccCCCCCCC--ccccC--CceeeeecCCCC
Q 005750 239 IENNSFVGEIP--PALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g~ip--~~~~~--~~~~~~~~~n~~ 266 (679)
|++|+++ .+| ..+.. .+..+.+++|+.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 9999998 555 33332 446677777753
No 289
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.27 E-value=1.4e-11 Score=124.12 Aligned_cols=106 Identities=23% Similarity=0.289 Sum_probs=84.0
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+++++.|+|++|++++..|..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+..+++|++|+
T Consensus 34 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 34 PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 35688899999998877777888889999999999988888874 88888888888888888866666788888888888
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 239 IENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
|++|+|+ .+|+..+ ..+..+.+++|..
T Consensus 114 L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCcCC-CcChhHhccCCcccEEECcCCcC
Confidence 8888888 6666543 2445666676643
No 290
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.27 E-value=2.4e-12 Score=118.65 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=88.6
Q ss_pred CceEEEEcCCCccc-ccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.|++. +.++++++|+.|+|++|++++.+|..++.+++|+.|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 58999999999998 88999999999999999999999988 77999999999999999999778888888999999999
Q ss_pred cccCCCCCCC--ccccC--CceeeeecCCCC
Q 005750 240 ENNSFVGEIP--PALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 240 ~~N~l~g~ip--~~~~~--~~~~~~~~~n~~ 266 (679)
++|++++ +| ..+.. .+..+.+++|+.
T Consensus 96 s~N~i~~-~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 96 SGNKIKD-LSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp TTSCCCS-HHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCcCCC-hHHHHHHhhCCCCCEEeCcCCcc
Confidence 9999984 43 44432 456677777753
No 291
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.26 E-value=7.9e-12 Score=137.11 Aligned_cols=112 Identities=19% Similarity=0.225 Sum_probs=97.9
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
..++|+.|+|++|.+++..|..|+++++|+.|+|++|.|++.+| .|.++++|+.|+|++|++++..|..++.+++|++|
T Consensus 297 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 376 (455)
T 3v47_A 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL 376 (455)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEE
Confidence 34689999999999998888899999999999999999998888 48999999999999999998889999999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~~ 271 (679)
+|++|+++ .+|+..+. .+..+.+++||+.|.++
T Consensus 377 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 377 ALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999 57765543 55778899999998754
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.25 E-value=9.6e-12 Score=129.03 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=98.8
Q ss_pred CCceEEEEcCCCcccc-cCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
.++|+.|+|++|.+++ .+|..+..+++|+.|+|++|+|++.+| .|.++++|+.|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 4689999999999997 689999999999999999999999988 59999999999999999996666689999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|++|++++..|..+.. .+..+.+++|++.|++
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99999999888876654 4577899999998864
No 293
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.25 E-value=8.5e-12 Score=128.07 Aligned_cols=110 Identities=19% Similarity=0.276 Sum_probs=95.7
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..+..|+++++|+.|+|++|+|++.++. |.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 46899999999999976667799999999999999999998885 99999999999999999988899999999999999
Q ss_pred ccccCCCCCCCcc-cc--CCceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPA-LL--TGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~-~~--~~~~~~~~~~n~~~~~~ 270 (679)
|++|+++ .+|.. +. ..+..+.+++||+.|++
T Consensus 208 l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 208 LFANNLS-ALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CCSSCCS-CCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCC-cCCHHHcccCcccCEEeccCCCccCCC
Confidence 9999999 46644 32 34577889999999864
No 294
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=134.94 Aligned_cols=110 Identities=24% Similarity=0.327 Sum_probs=98.1
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
..++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+| .|.++++|+.|+|++|++++..|..|..+++|+.|
T Consensus 183 ~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 183 GLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp TCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred cccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 3568999999999999 666 58999999999999999999988 59999999999999999998888899999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~~ 271 (679)
+|++|+|+ .+|...+. .+..+.+++||+.|++.
T Consensus 261 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 261 NLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ECCCCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999999 67776544 45778999999999763
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.23 E-value=9.2e-12 Score=140.04 Aligned_cols=118 Identities=17% Similarity=0.200 Sum_probs=99.1
Q ss_pred CCCCceEEEeCCC----------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEe
Q 005750 147 PVPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 215 (679)
Q Consensus 147 ~~~w~~~~c~~~~----------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 215 (679)
.|+|.|+ |++.. +++|+.|+|++|++++..|..|+++++|++|+|++|+|++.+| .|+++++|+.|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 3589998 88752 3579999999999998888999999999999999999999988 5999999999999
Q ss_pred cCccCCCCCCCCCCCCCccceecccccCCCC-CCCccccC--CceeeeecCCC
Q 005750 216 ENNELTGSLPSYMGSLPNLQELHIENNSFVG-EIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 216 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~--~~~~~~~~~n~ 265 (679)
++|++++..|..++.+++|++|+|++|++++ .+|..+.. .+..+.+++|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 9999997777779999999999999999985 34554433 44566677765
No 296
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.5e-11 Score=130.02 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=86.3
Q ss_pred CCCCCCCceEEEeCC-C---------CCceEEEEcCC-CcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCc
Q 005750 144 PCVPVPWEWVTCSTT-T---------PPRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR 211 (679)
Q Consensus 144 ~c~~~~w~~~~c~~~-~---------~~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~ 211 (679)
.|..|.|..+.|+.. . ..+|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++.+|. |.+|++|+
T Consensus 4 ~c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp SSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred cCccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 353467888988765 1 24599999996 999987778999999999999999999999995 89999999
Q ss_pred EEEecCccCCCCCCCCCCCCCccceecccccCCCCC
Q 005750 212 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGE 247 (679)
Q Consensus 212 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 247 (679)
.|+|++|+|++..|..+..++ |+.|+|++|.|...
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred EEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999954444555555 99999999999843
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.22 E-value=8.3e-12 Score=142.48 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=90.7
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
|..++.|||++|+|++..|..|.+|++|++|+|++|+|++++| .|.+|++|++|+|++|+|++..|..|.+|++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 4579999999999997777889999999999999999999988 499999999999999999955556789999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCC
Q 005750 239 IENNSFVGEIPPALLT---GKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~---~~~~~~~~~n~~ 266 (679)
|++|+|+ .+|+..+. .+..+.+++|..
T Consensus 131 Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 131 AVETNLA-SLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp CTTSCCC-CSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCcCC-CCChhhhhcCcccCeeccccCcc
Confidence 9999999 66665433 456677777754
No 298
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.21 E-value=1.1e-11 Score=141.16 Aligned_cols=111 Identities=19% Similarity=0.144 Sum_probs=96.5
Q ss_pred CCceEEEEcCCCcccc-cCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
.++|+.|+|++|.+++ .+|..|+.+++|+.|+|++|++++.+|. |.++++|+.|+|++|++++.+|..++.+++|+.|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 4688999999999988 4788899999999999999999998884 8999999999999999998889999999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~~ 271 (679)
+|++|+|+ .+|..+.. .+..+.+.+||+.|++.
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999998 88887543 35778899999998753
No 299
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.21 E-value=2.3e-11 Score=129.46 Aligned_cols=120 Identities=21% Similarity=0.153 Sum_probs=88.7
Q ss_pred CCCceEEEeCCC--------CCceEEEEcCCCcccccCCcccc-CCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750 148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 217 (679)
Q Consensus 148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 217 (679)
|.+..+.|+... +..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456667776532 34578899999999876666676 88888899998888888887 488888888888888
Q ss_pred ccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750 218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~ 267 (679)
|+|++..+..|..+++|+.|+|++|+|++..|..+.. .+..+.+++|...
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 8888655667888888888888888888433443322 4456666776543
No 300
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.20 E-value=5e-11 Score=122.88 Aligned_cols=107 Identities=28% Similarity=0.350 Sum_probs=95.1
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
..++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 4578999999999999 8999999999999999999999999985 9999999999999999996666678999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKL 267 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~ 267 (679)
+|++|+|+ .+|...+. .+..+.+++|...
T Consensus 154 ~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 154 SLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp ECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999999 78887654 4567788888654
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.20 E-value=2.1e-11 Score=133.89 Aligned_cols=110 Identities=23% Similarity=0.301 Sum_probs=97.6
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
..++|+.|+|++|++++ +| .+..+++|+.|+|++|.|++.+| .|.++++|+.|+|++|++++..|..|..+++|+.|
T Consensus 194 ~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp TCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 35689999999999994 54 58999999999999999999988 59999999999999999998889999999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~~ 271 (679)
+|++|+|+ .+|...+. .+..+.+++||+.|++.
T Consensus 272 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 272 NLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ECCCCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999999 67766543 45778999999999763
No 302
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.19 E-value=1.5e-11 Score=134.86 Aligned_cols=125 Identities=16% Similarity=0.183 Sum_probs=99.4
Q ss_pred CCCC-CCCCce--EEEeCCC-------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC--CCCCCCCC
Q 005750 143 DPCV-PVPWEW--VTCSTTT-------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDL 210 (679)
Q Consensus 143 ~~c~-~~~w~~--~~c~~~~-------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L 210 (679)
|||. .|.|.+ +.|+... +++|+.|+|++|.+++..|..|++|++|++|+|++|.+.+.++ .|.++++|
T Consensus 2 ~p~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 2 DPGTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp -----CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred CCccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 4553 244555 6666432 3579999999999998889999999999999999999987764 49999999
Q ss_pred cEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCcc--cc--CCceeeeecCCCCc
Q 005750 211 RIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA--LL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 211 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~--~~--~~~~~~~~~~n~~~ 267 (679)
+.|+|++|++++..|..|+++++|++|+|++|++++.+|.. +. ..+..+.+++|...
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~ 142 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccC
Confidence 99999999999888999999999999999999999766554 32 24566777777543
No 303
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.19 E-value=3.2e-11 Score=114.55 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=80.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..+..|+++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 36899999999999966666789999999999999999999885 89999999999999999955555578899999999
Q ss_pred ccccCCCCCCC
Q 005750 239 IENNSFVGEIP 249 (679)
Q Consensus 239 l~~N~l~g~ip 249 (679)
|++|.+++..|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999997665
No 304
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=2.8e-11 Score=122.63 Aligned_cols=140 Identities=14% Similarity=0.071 Sum_probs=109.1
Q ss_pred HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEEecCC
Q 005750 359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHN 437 (679)
Q Consensus 359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~ 437 (679)
|.+...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 445677888888999999865 6899999986432223346889999999994 67788899998888899999999999
Q ss_pred CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005750 438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC----------------------------------------- 476 (679)
Q Consensus 438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~----------------------------------------- 476 (679)
.+|.+.+.. ......++.+++++|+.||+..
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999876421 1123467889999999999710
Q ss_pred ---------------CCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 477 ---------------NPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 477 ---------------~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
...++|||++|.||+++++..+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799999764
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.18 E-value=2.3e-11 Score=128.91 Aligned_cols=116 Identities=20% Similarity=0.244 Sum_probs=97.5
Q ss_pred CCCCceEEEeCCC----------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEe
Q 005750 147 PVPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 215 (679)
Q Consensus 147 ~~~w~~~~c~~~~----------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l 215 (679)
+|+|.++ |+++. +++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.+| .|.++++|+.|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 4588887 87642 3589999999999997666689999999999999999999988 4999999999999
Q ss_pred cCccCCCCCCCC-CCCCCccceecccccCCCCCCCc-cccC---CceeeeecCCC
Q 005750 216 ENNELTGSLPSY-MGSLPNLQELHIENNSFVGEIPP-ALLT---GKVIFKYDNNP 265 (679)
Q Consensus 216 ~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~ip~-~~~~---~~~~~~~~~n~ 265 (679)
++|+++ .+|.. ++.+++|++|+|++|+++ .+|. ..+. .+..+.+++|.
T Consensus 108 s~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 999999 45554 899999999999999999 7877 4332 45667777774
No 306
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.18 E-value=4.4e-11 Score=118.78 Aligned_cols=109 Identities=23% Similarity=0.227 Sum_probs=96.9
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 46899999999999855556689999999999999999999885 899999999999999999 9999999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 239 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
|++|+|+ .+|...+. .+..+.+.+||+.|.+
T Consensus 142 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 142 LDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 67765443 5577889999999865
No 307
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.18 E-value=8.7e-11 Score=119.77 Aligned_cols=107 Identities=22% Similarity=0.290 Sum_probs=90.4
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|++++..+..|+++++|++|+|++|+|++.++. |.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999977777789999999999999999998885 89999999999999999976667789999999999
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCCc
Q 005750 239 IENNSFVGEIPPALL---TGKVIFKYDNNPKL 267 (679)
Q Consensus 239 l~~N~l~g~ip~~~~---~~~~~~~~~~n~~~ 267 (679)
|++|+++ .+|+..+ ..+..+.+.+|...
T Consensus 164 l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 164 LSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCCcC-ccCHHHhcCCccCCEEECCCCcCC
Confidence 9999999 5555443 35567778887654
No 308
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.17 E-value=4.1e-11 Score=137.40 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=98.7
Q ss_pred CceEEEEcCCCcccccCCcccc--CCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEe------cCccCCCCCCCCCCCCC
Q 005750 161 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSLP 232 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l------~~N~l~g~~p~~~~~l~ 232 (679)
++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.++++|+.|+| ++|++.+.+|..++.++
T Consensus 488 ~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 488 YLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 38999999999999 8999998 999999999999999995447999999999999 56889999999999999
Q ss_pred ccceecccccCCCCCCCccccCCceeeeecCCCCccc
Q 005750 233 NLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 269 (679)
Q Consensus 233 ~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~~~ 269 (679)
+|+.|+|++|+| +.+|..++..+..+.+++|+..|-
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred CCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 999999999999 599999988888999999998873
No 309
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.16 E-value=4.8e-11 Score=115.20 Aligned_cols=88 Identities=25% Similarity=0.284 Sum_probs=80.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.|++..+..|.+|++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 4689999999999998778889999999999999999999999 599999999999999999955555699999999999
Q ss_pred ccccCCCCC
Q 005750 239 IENNSFVGE 247 (679)
Q Consensus 239 l~~N~l~g~ 247 (679)
|++|.+...
T Consensus 133 L~~N~~~C~ 141 (193)
T 2wfh_A 133 IGANPLYCD 141 (193)
T ss_dssp CCSSCEECS
T ss_pred eCCCCeecC
Confidence 999999754
No 310
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.15 E-value=5.9e-11 Score=121.15 Aligned_cols=107 Identities=15% Similarity=0.030 Sum_probs=89.6
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++ .|.++++|+.|+|++|++++..|..+..+++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3469999999999997777789999999999999999999888 599999999999999999977778899999999999
Q ss_pred ccccCCCCCCCcccc--CCceeeeecCCCC
Q 005750 239 IENNSFVGEIPPALL--TGKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g~ip~~~~--~~~~~~~~~~n~~ 266 (679)
+++|++++..+..+. ..+..+.+++|..
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 136 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLI 136 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCcc
Confidence 999999843333333 2456677777754
No 311
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=4.5e-11 Score=134.74 Aligned_cols=102 Identities=25% Similarity=0.312 Sum_probs=85.2
Q ss_pred ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750 162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 241 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 241 (679)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.|++|++|+.|+|++|+|++ +| .++.|++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 57889999999995 776 999999999999999999554469999999999999999995 78 899999999999999
Q ss_pred cCCCCCC-CccccC--CceeeeecCCCCc
Q 005750 242 NSFVGEI-PPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 242 N~l~g~i-p~~~~~--~~~~~~~~~n~~~ 267 (679)
|+|++.+ |..+.. .+..+.+++|+..
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 9999655 777654 5577788888754
No 312
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.14 E-value=8.2e-11 Score=123.38 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=94.3
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
++|+.|+|++|.+++..|..|.++++|+.|+|++|.|++.++ .+.++++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 589999999999998889999999999999999999999988 5999999999999999999 99999999999999999
Q ss_pred cccCCCCCCCccccC---------CceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~---------~~~~~~~~~n~~~~ 268 (679)
++|+++ .+|...+. ....+.+.+||..+
T Consensus 271 ~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 271 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 999999 67765543 23457788998764
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.13 E-value=2e-11 Score=144.60 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=86.3
Q ss_pred CceEEEEcCCCccc-----ccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCcc
Q 005750 161 PRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 234 (679)
Q Consensus 161 ~~l~~L~L~~n~l~-----g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 234 (679)
++|+.|+|++|.++ +..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+. ++|
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L 528 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANL 528 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCC
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccc
Confidence 46666777777665 34445688899999999999999999885 89999999999999999965555555 899
Q ss_pred ceecccccCCCCCCCccccCCceeeeecCCCCcccc
Q 005750 235 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 235 ~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~~~~ 270 (679)
+.|+|++|+|+|.+|.. +..+..+.+++||+.|++
T Consensus 529 ~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 529 EILDISRNQLLAPNPDV-FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCSS
T ss_pred cEEECCCCcCCCCChhH-hCCcCEEEecCCCccccc
Confidence 99999999999766655 456778899999999853
No 314
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=128.79 Aligned_cols=119 Identities=22% Similarity=0.258 Sum_probs=97.7
Q ss_pred CCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCcc
Q 005750 149 PWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE 219 (679)
Q Consensus 149 ~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~ 219 (679)
.|..+.|+... +.+++.|+|++|+|++..|..|.++++|+.|+|++|.|++..| .|.++++|+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 36678887532 4578999999999998888899999999999999999999988 59999999999999999
Q ss_pred CCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750 220 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 220 l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~ 267 (679)
+++..+..|+++++|++|+|++|++++..|..+.. .+..+.+++|...
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 141 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccc
Confidence 99544456899999999999999999655555432 4566777777543
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.13 E-value=1e-10 Score=128.31 Aligned_cols=115 Identities=20% Similarity=0.237 Sum_probs=97.0
Q ss_pred CceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccC
Q 005750 150 WEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 220 (679)
Q Consensus 150 w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l 220 (679)
|..+.|+... +++++.|+|++|+|++..|..|.+|++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 4567776532 4579999999999998889999999999999999999999988 599999999999999999
Q ss_pred CCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCC
Q 005750 221 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 265 (679)
Q Consensus 221 ~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~ 265 (679)
++..+..+..+++|++|+|++|+++ .+|...+. .+..+.+++|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCC
Confidence 9666667999999999999999999 77775543 34556666644
No 316
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.13 E-value=8.2e-11 Score=138.35 Aligned_cols=106 Identities=17% Similarity=0.269 Sum_probs=97.7
Q ss_pred CceEEEEcCCCcccccCCcccc--CCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecC------ccCCCCCCCCCCCCC
Q 005750 161 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLP 232 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~------N~l~g~~p~~~~~l~ 232 (679)
++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.++++|+.|+|++ |++.+.+|..++.++
T Consensus 728 ~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 728 YLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp GGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCC
Confidence 38999999999999 8999998 99999999999999999655799999999999976 889999999999999
Q ss_pred ccceecccccCCCCCCCccccCCceeeeecCCCCcc
Q 005750 233 NLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 268 (679)
Q Consensus 233 ~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~~ 268 (679)
+|+.|+|++|+| +.||..++..+..+.+++|+...
T Consensus 807 ~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 807 SLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp SCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 999999999999 69999998888889999998764
No 317
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.12 E-value=5.2e-11 Score=138.33 Aligned_cols=105 Identities=27% Similarity=0.360 Sum_probs=79.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
...|+.|+|++|.+. .+|..+++|++|+.|+|++|.|+.++++|++|++|+.|+|++|+|+ .+|..|+.|++|++|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 357788888888887 7787777888888888888888844335888888888888888888 77888888888888888
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCc
Q 005750 240 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~--~~~~~~~~~n~~~ 267 (679)
++|.|+ .||..+.. .+..+.+++|+..
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 888886 77877543 4466677777654
No 318
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.12 E-value=4.4e-11 Score=119.40 Aligned_cols=104 Identities=21% Similarity=0.323 Sum_probs=88.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCc-CCCCCC-CCCCCCCCcEEEecC-ccCCCCCCCCCCCCCccce
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLP-DMSRLIDLRIVHLEN-NELTGSLPSYMGSLPNLQE 236 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~ 236 (679)
+.+|+.|+|++|++++..+..|.++++|+.|+|++|+ +++.++ .|.++++|+.|+|++ |++++..|..|..+++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 4589999999999997777789999999999999997 888888 599999999999999 9999655578999999999
Q ss_pred ecccccCCCCCCCccccC--Cce---eeeecCCC
Q 005750 237 LHIENNSFVGEIPPALLT--GKV---IFKYDNNP 265 (679)
Q Consensus 237 L~l~~N~l~g~ip~~~~~--~~~---~~~~~~n~ 265 (679)
|++++|+++ .+|. +.. .+. .+.+++|+
T Consensus 110 L~l~~n~l~-~lp~-~~~l~~L~~L~~L~l~~N~ 141 (239)
T 2xwt_C 110 LGIFNTGLK-MFPD-LTKVYSTDIFFILEITDNP 141 (239)
T ss_dssp EEEEEECCC-SCCC-CTTCCBCCSEEEEEEESCT
T ss_pred EeCCCCCCc-cccc-cccccccccccEEECCCCc
Confidence 999999999 5887 322 223 67778884
No 319
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.12 E-value=3.3e-11 Score=129.53 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=63.8
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.++.+..+++|+.|+|++|+++ .+|..++.+++|+.|+|+
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECC
Confidence 4555666666666655555666666666666666666655444555666666666666666 555555566666666666
Q ss_pred ccCCCCCCCccccCCceeeeecCCCCccc
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNPKLHK 269 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~~~~~ 269 (679)
+|+++ .+|......+..+.+++||+.|.
T Consensus 327 ~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 327 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCccc-eeCchhhccCCEEEcCCCCccch
Confidence 66665 45544444555666677776653
No 320
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.11 E-value=3.4e-11 Score=137.04 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=68.4
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|.+++.+|..|+++++|+.|+|++|.|++.++.+..+++|+.|+|++|.|+ .+|..++.+++|+.|+|+
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~ 332 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 332 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECC
Confidence 4566666666666666666666666666666666666665445556666666666666666 566666666666666666
Q ss_pred ccCCCCCCCccccCCceeeeecCCCCccc
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNPKLHK 269 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~~~~~ 269 (679)
+|+|+ .+|...+..+..+.+++||+.|.
T Consensus 333 ~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 333 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 66666 44544455566677777777764
No 321
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.11 E-value=6e-11 Score=133.73 Aligned_cols=89 Identities=28% Similarity=0.330 Sum_probs=82.4
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCC-CCCCCCCCcccee
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQEL 237 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~-p~~~~~l~~L~~L 237 (679)
..++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +|.|++|++|+.|+|++|+|++.. |..++.|++|+.|
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 3468999999999999 999999999999999999999999 469999999999999999999776 9999999999999
Q ss_pred cccccCCCCCCC
Q 005750 238 HIENNSFVGEIP 249 (679)
Q Consensus 238 ~l~~N~l~g~ip 249 (679)
+|++|+|++..|
T Consensus 539 ~L~~N~l~~~~~ 550 (567)
T 1dce_A 539 NLQGNSLCQEEG 550 (567)
T ss_dssp ECTTSGGGGSSS
T ss_pred EecCCcCCCCcc
Confidence 999999995443
No 322
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.10 E-value=1.5e-10 Score=131.88 Aligned_cols=107 Identities=18% Similarity=0.066 Sum_probs=82.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+.+|+.|+|++|++++..+..|.++++|++|+|++|+|++.+| .|.++++|+.|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 4578888888888887777788888888888888888888877 488888888888888888877788888888888888
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCC
Q 005750 239 IENNSFVGEIPPALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~ 266 (679)
|++|++++..|..+.. .+..+.+++|..
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcc
Confidence 8888887333344332 345566666653
No 323
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.10 E-value=6.8e-11 Score=130.62 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=96.3
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.+|+.|+|++|++++..+..|.++++|+.|+|++|.|++.++. |.++++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEEC
T ss_pred ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEEC
Confidence 3789999999999944336799999999999999999998884 999999999999999999888999999999999999
Q ss_pred cccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 240 ENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
++|+|+ .+|+..+. .+..+.+++||+.|++
T Consensus 304 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 304 SGNQLT-TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CSSCCS-CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCCcCc-eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 999999 67776544 4577899999999875
No 324
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.10 E-value=2e-10 Score=117.70 Aligned_cols=108 Identities=20% Similarity=0.204 Sum_probs=90.4
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 36899999999999987788899999999999999999988885 89999999999999999955555689999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750 239 IENNSFVGEIPPALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~ 267 (679)
|++|++++..|..+.. .+..+.+++|...
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 9999999666766643 4566777777544
No 325
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.10 E-value=8.9e-11 Score=111.38 Aligned_cols=102 Identities=23% Similarity=0.261 Sum_probs=84.9
Q ss_pred CceEEEEcCCCcccccCCccccCCC-CCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCC-CCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ 238 (679)
.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. +.|.++++|+.|+|++|+|+ .+|.. ++.+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEE
Confidence 58999999999999 5654 55555 999999999999987 78999999999999999999 56655 48999999999
Q ss_pred ccccCCCCCCCc--cccC--CceeeeecCCCCc
Q 005750 239 IENNSFVGEIPP--ALLT--GKVIFKYDNNPKL 267 (679)
Q Consensus 239 l~~N~l~g~ip~--~~~~--~~~~~~~~~n~~~ 267 (679)
|++|+|+ .+|. .+.. .+..+.+++|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999997 7886 4432 4567788888754
No 326
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.09 E-value=1.1e-10 Score=131.67 Aligned_cols=112 Identities=19% Similarity=0.190 Sum_probs=91.7
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCC-CCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
.++|+.|+|++|.+.+.+|..+.++++|+.|+|++|.++ +.+| .+..+++|+.|+|++|++++..|..++.+++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 467888888888888888888888999999999999887 5566 58899999999999999998888899999999999
Q ss_pred cccccCCCCCCCcccc--CCceeeeecCCCCccccc
Q 005750 238 HIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKES 271 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~~~~ 271 (679)
+|++|++++..|..+. ..+..+.+.+||+.|.++
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999854444333 345778889999988643
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.09 E-value=7.8e-11 Score=113.99 Aligned_cols=104 Identities=14% Similarity=0.206 Sum_probs=84.0
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..|..|+.|++|+.|+|++|++++..| .++++++|+.|+|++|++.+.+| .+..+++|+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 4689999999999998888899999999999999999998766 58899999999999998333777 688899999999
Q ss_pred ccccCCCCCCCc-cccCCceeeeecCCC
Q 005750 239 IENNSFVGEIPP-ALLTGKVIFKYDNNP 265 (679)
Q Consensus 239 l~~N~l~g~ip~-~~~~~~~~~~~~~n~ 265 (679)
+++|+++ .+|. .-...+..+.+.+|+
T Consensus 166 l~~n~i~-~~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 166 IQFDGVH-DYRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CTTBCCC-CCTTGGGCSSCCEEEECBC-
T ss_pred CCCCCCc-ChHHhccCCCCCEEEeeCcc
Confidence 9999998 4552 223355667777776
No 328
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.2e-10 Score=117.30 Aligned_cols=130 Identities=17% Similarity=0.090 Sum_probs=98.2
Q ss_pred ccC-cCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC--cccccccccccceEEEEEEecCCCcH
Q 005750 364 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 364 ~LG-~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
.++ .|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55569999998777888999997653 2345778999999996444 55688888777788999999999888
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 005750 441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 476 (679)
Q Consensus 441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~-------------------------------------------- 476 (679)
. ... .+ ...++.++++.|+.||+..
T Consensus 103 ~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 221 11 2357788888888888721
Q ss_pred -----------CCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 477 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 477 -----------~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
...++|||++|.||++++++.+.|+||+.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999765
No 329
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.08 E-value=1.6e-10 Score=131.47 Aligned_cols=129 Identities=13% Similarity=0.012 Sum_probs=98.2
Q ss_pred CCCCCCCCCC-CCceEEEeCC--------CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCC
Q 005750 139 NDRGDPCVPV-PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLI 208 (679)
Q Consensus 139 ~w~~~~c~~~-~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~ 208 (679)
.|.+.+|... .+.-+.|+.. -+..++.|+|++|.+++..|..|+++++|++|+|++|++++..| .|.+++
T Consensus 2 ~~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 2 TSSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ----CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred ccccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCcc
Confidence 3555566421 2334666542 24578999999999998888899999999999999999999988 599999
Q ss_pred CCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCcccc--CCceeeeecCCCCc
Q 005750 209 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 209 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 267 (679)
+|+.|+|++|++++..|..|+.+++|++|+|++|++++..|..+. ..+..+.+++|...
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~ 142 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS 142 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc
Confidence 999999999999988899999999999999999999843233332 24456666766543
No 330
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.08 E-value=1.1e-10 Score=133.06 Aligned_cols=109 Identities=20% Similarity=0.213 Sum_probs=64.8
Q ss_pred CceEEEEcCCCccccc---CCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccce
Q 005750 161 PRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 236 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~---~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 236 (679)
++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++.+| .|.++++|+.|+|++|++++..|..+..+++| .
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~ 527 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-Y 527 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-E
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-E
Confidence 4555566666555542 12345556666666666666666655 36666666666666666666666666666666 6
Q ss_pred ecccccCCCCCCCcccc--CCceeeeecCCCCcccc
Q 005750 237 LHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 237 L~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~~~ 270 (679)
|+|++|++++.+|..+. ..+..+.+.+||+.|++
T Consensus 528 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 528 LNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp EECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred EECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 66666666643333222 24456777888888754
No 331
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.07 E-value=4.2e-11 Score=139.10 Aligned_cols=93 Identities=31% Similarity=0.399 Sum_probs=85.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+.++++|++|++|+.|+|++|+|+ .||..|+.|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 468999999999999 9999999999999999999999955447999999999999999998 99999999999999999
Q ss_pred cccCCCCCCCccccC
Q 005750 240 ENNSFVGEIPPALLT 254 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~ 254 (679)
++|+|+|.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 999999888876643
No 332
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.07 E-value=2.9e-10 Score=116.01 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=71.0
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
++|+.|+|++|++++..+..|.++++|+.|+|++|.|++.+| .|.++++|+.|+|++|++++..+..++.+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 467777777777776555667777777777777777777766 3777777777777777777555556777777777777
Q ss_pred cccCCCC-CCCccccC--CceeeeecCCC
Q 005750 240 ENNSFVG-EIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 240 ~~N~l~g-~ip~~~~~--~~~~~~~~~n~ 265 (679)
++|++++ .+|..+.. .+..+.+++|.
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCC
Confidence 7777764 24555442 44555666654
No 333
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.07 E-value=1.1e-10 Score=122.48 Aligned_cols=106 Identities=22% Similarity=0.206 Sum_probs=93.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.+| .+..+++|+.|+|++|+++ .+|..++.+++|+.|+|
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 589999999999998888899999999999999999999988 5999999999999999999 99999999999999999
Q ss_pred cccCCCCCCCccccCC---------ceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPPALLTG---------KVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~~---------~~~~~~~~n~~~~ 268 (679)
++|+++ .+|...+.+ ...+.+.+||+.+
T Consensus 272 ~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 272 HTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 999999 666554432 3467888999774
No 334
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.06 E-value=1e-10 Score=110.00 Aligned_cols=88 Identities=28% Similarity=0.334 Sum_probs=47.9
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCC--CCCCCCCCCcEEEecCccCCCCCCC----CCCCCCcc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL--PDMSRLIDLRIVHLENNELTGSLPS----YMGSLPNL 234 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L 234 (679)
++|+.|+|++|.+++.+|..+.++++|+.|+|++|.|++.+ +.+.++++|+.|+|++|.++ .+|. .+..+++|
T Consensus 71 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L 149 (168)
T 2ell_A 71 PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQL 149 (168)
T ss_dssp SSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSC
T ss_pred CCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccC
Confidence 35555555555555545555555555555555555555543 24555555555555555555 2332 45555555
Q ss_pred ceecccccCCCCCCCc
Q 005750 235 QELHIENNSFVGEIPP 250 (679)
Q Consensus 235 ~~L~l~~N~l~g~ip~ 250 (679)
++|++++|.+. ++|+
T Consensus 150 ~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 150 TYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CEETTEETTSC-BCCS
T ss_pred cEecCCCCChh-hccc
Confidence 55555555555 4444
No 335
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.06 E-value=1.6e-10 Score=136.98 Aligned_cols=108 Identities=16% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCC-C-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccce
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-P-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 236 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 236 (679)
-+++|+.|+|++|.+++..|..|.+|++|++|+|++|.+.+.+ | .|.+|++|+.|+|++|++++..|..|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 3467888888888888777778888888888888888666655 4 4788888888888888888777778888888888
Q ss_pred ecccccCCCCCCCcc--cc--CCceeeeecCCCC
Q 005750 237 LHIENNSFVGEIPPA--LL--TGKVIFKYDNNPK 266 (679)
Q Consensus 237 L~l~~N~l~g~ip~~--~~--~~~~~~~~~~n~~ 266 (679)
|+|++|.+++.+|.. +. ..+..+.+++|..
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l 135 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCC
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcc
Confidence 888888887666654 22 2345556666643
No 336
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.06 E-value=3.7e-10 Score=128.46 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=90.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..|..|++|++|+.|+|++|.|++.++. |+++++|+.|+|++|+|++..|..|+.+++|+.|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 46899999999999987788889999999999999999988886 79999999999999999988888899999999999
Q ss_pred ccccCCCCCCCccccCCceeeeecCCC
Q 005750 239 IENNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
|++|.++ .+|...+..+..+.+++|.
T Consensus 178 L~~N~l~-~~~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 178 LSSNRLT-HVDLSLIPSLFHANVSYNL 203 (597)
T ss_dssp CTTSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred CcCCCCC-CcChhhhhhhhhhhcccCc
Confidence 9999998 5666666666666666664
No 337
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.06 E-value=2.7e-10 Score=128.62 Aligned_cols=109 Identities=23% Similarity=0.303 Sum_probs=74.5
Q ss_pred CCceEEEEcCCCcccc--cCCccccCCCCCCEEECCCCcCCCCCC-C-CCCC----------------------CCCcEE
Q 005750 160 PPRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLP-D-MSRL----------------------IDLRIV 213 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p-~-~~~l----------------------~~L~~L 213 (679)
.++|+.|+|++|++++ .+|..++++++|+.|+|++|++++.+| . +..+ ++|+.|
T Consensus 376 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L 455 (562)
T 3a79_B 376 LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL 455 (562)
T ss_dssp CSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEE
T ss_pred cCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEE
Confidence 3466777777777764 234556666777777777777666333 2 4333 466677
Q ss_pred EecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 214 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 214 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|...+. .+..+.+++||+.|++
T Consensus 456 ~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 456 DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp ECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred ECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 77777776 67777778888888888888888 78876332 4466788999998864
No 338
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.05 E-value=5.5e-11 Score=109.43 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=79.1
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCC-CCCCCCCCCccce
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQE 236 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~-~p~~~~~l~~L~~ 236 (679)
..++|+.|+|++|.+++. ..++++++|+.|+|++|.|++.+|. +.++++|+.|+|++|++++. .|..++.+++|+.
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 346899999999999966 8899999999999999999998885 77799999999999999963 4588999999999
Q ss_pred ecccccCCCCCCCc
Q 005750 237 LHIENNSFVGEIPP 250 (679)
Q Consensus 237 L~l~~N~l~g~ip~ 250 (679)
|++++|+++ .+|.
T Consensus 118 L~l~~N~l~-~~~~ 130 (149)
T 2je0_A 118 LDLFNCEVT-NLND 130 (149)
T ss_dssp EECTTCGGG-GSTT
T ss_pred EeCcCCccc-chHH
Confidence 999999999 4554
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.05 E-value=3.3e-10 Score=118.95 Aligned_cols=116 Identities=22% Similarity=0.331 Sum_probs=96.6
Q ss_pred CCCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750 147 PVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 217 (679)
Q Consensus 147 ~~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~ 217 (679)
.|.|..+.|+... +++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 3568888887532 3578999999999997778899999999999999999999988 599999999999999
Q ss_pred ccCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCC
Q 005750 218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 266 (679)
Q Consensus 218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~ 266 (679)
|+++ .+|..+. ++|++|++++|+++ .+|...+. .+..+.+++|..
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCC
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCcc
Confidence 9999 8888776 89999999999998 67765433 446677777764
No 340
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.05 E-value=1.4e-10 Score=120.93 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=90.4
Q ss_pred CCceEEEEcCCCcccccCCcccc-CCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++. |....+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 35899999999999987777764 789999999999999887 44456899999999999999 5777799999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCccc
Q 005750 239 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 269 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~ 269 (679)
|++|+|+ .+|..+.. .+..+.+++|++.|+
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999 78887643 557788999998874
No 341
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.05 E-value=5.9e-11 Score=123.58 Aligned_cols=106 Identities=18% Similarity=0.218 Sum_probs=86.0
Q ss_pred CCceEEEEcCCCcccccCCccc--cCCCCCCEEECCCCcCCCCCCCCCCC-----CCCcEEEecCccCCCCCCCCCCCCC
Q 005750 160 PPRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLP 232 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~l-----~~L~~L~l~~N~l~g~~p~~~~~l~ 232 (679)
.++|+.|+|++|+++|.+|..+ +.+++|+.|+|++|+|++.++.++++ ++|+.|+|++|++++..|..++.++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 4589999999999999999886 89999999999999999984347666 8999999999999977778899999
Q ss_pred ccceecccccCCCCCC--Cccc----cCCceeeeecCCC
Q 005750 233 NLQELHIENNSFVGEI--PPAL----LTGKVIFKYDNNP 265 (679)
Q Consensus 233 ~L~~L~l~~N~l~g~i--p~~~----~~~~~~~~~~~n~ 265 (679)
+|++|+|++|++.|.+ |..+ ...+..+.+++|.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 9999999999987652 3333 2345666777775
No 342
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.04 E-value=3.7e-10 Score=130.46 Aligned_cols=91 Identities=20% Similarity=0.204 Sum_probs=56.0
Q ss_pred ccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccc---cCCc
Q 005750 181 LKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL---LTGK 256 (679)
Q Consensus 181 ~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~---~~~~ 256 (679)
|.++++|+.|+|++|+|+..++. |.++++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++..|..+ +..+
T Consensus 532 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L 611 (680)
T 1ziw_A 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNL 611 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTC
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccccccc
Confidence 45555555666666666544443 6666666666666666663333345666777777777777763333222 2345
Q ss_pred eeeeecCCCCccccc
Q 005750 257 VIFKYDNNPKLHKES 271 (679)
Q Consensus 257 ~~~~~~~n~~~~~~~ 271 (679)
..+.+.+|||.|++.
T Consensus 612 ~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 612 TELDMRFNPFDCTCE 626 (680)
T ss_dssp SEEECTTCCCCBCCC
T ss_pred CEEEccCCCcccCCc
Confidence 677889999999764
No 343
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.03 E-value=9.6e-11 Score=111.17 Aligned_cols=87 Identities=22% Similarity=0.201 Sum_probs=79.5
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCC--CCCCCCcccee
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQEL 237 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L 237 (679)
++|+.|+|++|.|++. +.|+.+++|+.|+|++|+|++.+|. +.++++|+.|+|++|+|+ .+|. .++.+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999965 7899999999999999999998877 599999999999999997 7887 89999999999
Q ss_pred cccccCCCCCCCcc
Q 005750 238 HIENNSFVGEIPPA 251 (679)
Q Consensus 238 ~l~~N~l~g~ip~~ 251 (679)
++++|.++ .+|..
T Consensus 119 ~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 119 CILRNPVT-NKKHY 131 (176)
T ss_dssp ECCSSGGG-GSTTH
T ss_pred EecCCCCC-CcHhH
Confidence 99999998 77764
No 344
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.03 E-value=4.1e-10 Score=123.07 Aligned_cols=115 Identities=19% Similarity=0.206 Sum_probs=95.9
Q ss_pred CceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccC
Q 005750 150 WEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 220 (679)
Q Consensus 150 w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l 220 (679)
|..+.|.... +..++.|+|++|++++..+..|.+|++|+.|+|++|.|++..+ .|.++++|+.|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 5567776532 3578999999999998888999999999999999999999887 599999999999999999
Q ss_pred CCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCC
Q 005750 221 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 265 (679)
Q Consensus 221 ~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~ 265 (679)
++..+..|..+++|++|+|++|+++ .+|...+. .+..+.+++|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCC
Confidence 9555567999999999999999999 67765443 34556666654
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.02 E-value=7.7e-10 Score=118.76 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=89.6
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.++|+.|+|++|.+++..|..|+++++|+.|+|++|.|+..++. |.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 46899999999999987788899999999999999999987776 68999999999999999977788899999999999
Q ss_pred ccccCCCCCCCccccCCceeeeecCCC
Q 005750 239 IENNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
+++|+++ .++...+..+..+.+++|.
T Consensus 172 l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 172 LSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred CCCCcCC-ccccccccccceeeccccc
Confidence 9999998 5666666666666666664
No 346
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.01 E-value=3.6e-10 Score=126.21 Aligned_cols=109 Identities=20% Similarity=0.272 Sum_probs=70.0
Q ss_pred CCceEEEEcCCCcccc--cCCccccCCCCCCEEECCCCcCCCCCC-C-CCCCC----------------------CCcEE
Q 005750 160 PPRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLP-D-MSRLI----------------------DLRIV 213 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p-~-~~~l~----------------------~L~~L 213 (679)
.++|+.|+|++|++++ .+|..++++++|+.|+|++|.+++.+| . +..++ +|+.|
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L 426 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL 426 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEE
T ss_pred CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEE
Confidence 3567777777777775 455667777777777777777776433 2 44444 55555
Q ss_pred EecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750 214 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 270 (679)
Q Consensus 214 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~ 270 (679)
+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|...+. .+..+.+++||+.|++
T Consensus 427 ~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 427 DLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp ECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 55555555 56666667777777777777777 67765322 3456677788877753
No 347
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.01 E-value=6.5e-10 Score=124.86 Aligned_cols=108 Identities=18% Similarity=0.130 Sum_probs=74.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCC------------------CCCCCCcEEEecCccCC
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDM------------------SRLIDLRIVHLENNELT 221 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~------------------~~l~~L~~L~l~~N~l~ 221 (679)
.++|+.|+|++|+++ .+|..++.+++|+.|+|++|+|++.+..+ .++++|+.|+|++|+|+
T Consensus 386 l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~ 464 (549)
T 2z81_A 386 LKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK 464 (549)
T ss_dssp CTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred CCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC
Confidence 356777777777777 56777777777777777777766543221 25677777888888777
Q ss_pred CCCCCCCCCCCccceecccccCCCCCCCcccc--CCceeeeecCCCCcccc
Q 005750 222 GSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 270 (679)
Q Consensus 222 g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~~~ 270 (679)
.+|. .+.+++|+.|+|++|++++.+|..+. ..+..+.+++||+.|++
T Consensus 465 -~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 465 -TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp -SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred -cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 6776 45678888888888888855554333 34567788888888764
No 348
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.00 E-value=6e-10 Score=115.40 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=92.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCC-CCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG-PLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 237 (679)
.++|+.|+|++|.+.+..|..+.++++|+.|+|++|.+++ .+| .+.++++|+.|+|++|++++..|..+..+++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 4689999999999998889999999999999999999998 455 59999999999999999998788999999999999
Q ss_pred cccccCCCCCCCc-ccc--CCceeeeecCCCCcc
Q 005750 238 HIENNSFVGEIPP-ALL--TGKVIFKYDNNPKLH 268 (679)
Q Consensus 238 ~l~~N~l~g~ip~-~~~--~~~~~~~~~~n~~~~ 268 (679)
+|++|+++ .+|. .+. ..+..+.+++|+...
T Consensus 205 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 205 NMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp ECTTSCCS-BCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccC-ccChhhccCcccCCEeECCCCCCcc
Confidence 99999999 4554 332 355677888886543
No 349
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.99 E-value=7.5e-10 Score=116.00 Aligned_cols=115 Identities=24% Similarity=0.409 Sum_probs=88.2
Q ss_pred CCCceEEEeCC--------CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCc
Q 005750 148 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 218 (679)
Q Consensus 148 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N 218 (679)
|.|..+.|+.. .++.++.|+|++|++++..+..|+++++|++|+|++|+|++..| .|.++++|+.|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 46777777642 24578889999999987666788899999999999999998877 5888999999999999
Q ss_pred cCCCCCCCCCCCCCccceecccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 219 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 219 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
+++ .+|..+. ++|+.|++++|+++ .+|...+ ..+..+.+++|..
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCC
T ss_pred cCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcC
Confidence 988 7887765 78899999999988 4554332 2445666666654
No 350
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.97 E-value=3.5e-10 Score=117.51 Aligned_cols=105 Identities=21% Similarity=0.341 Sum_probs=73.2
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
..++|+.|+|++|.+++. ++ ++.+++|+.|+|++|+|++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+
T Consensus 127 ~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 201 (308)
T 1h6u_A 127 GLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVH 201 (308)
T ss_dssp TCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEE
Confidence 346788888888888743 33 7788888888888888887655 7788888888888888874 443 77788888888
Q ss_pred ccccCCCCCCCccccCCceeeeecCCCCcc
Q 005750 239 IENNSFVGEIPPALLTGKVIFKYDNNPKLH 268 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~~~~~~~~~n~~~~ 268 (679)
|++|++++..|-.-...+..+.+++|+..+
T Consensus 202 L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 202 LKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred ccCCccCccccccCCCCCCEEEccCCeeec
Confidence 888888743321222344566777776543
No 351
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.97 E-value=4.5e-10 Score=108.58 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=63.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|+++ .+| .+..+++|+.|+|++|.++.. +.+.++++|+.|+|++|++++..|..++.+++|++|+|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 35667777777766 555 566677777777777754432 356666777777777777766666666677777777777
Q ss_pred ccCCCCCCCccccC--CceeeeecCCC
Q 005750 241 NNSFVGEIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 241 ~N~l~g~ip~~~~~--~~~~~~~~~n~ 265 (679)
+|++++..|..+.. .+..+.+++|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 77776545544432 33445555554
No 352
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.97 E-value=7.3e-10 Score=125.07 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=86.0
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|+ |.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 35789999999999977778899999999999999999998884 999999999999999999 78887 889999999
Q ss_pred ccccCCCC-CCCccccC--CceeeeecCCCC
Q 005750 239 IENNSFVG-EIPPALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 239 l~~N~l~g-~ip~~~~~--~~~~~~~~~n~~ 266 (679)
|++|++++ .+|..+.. .+..+.+++|..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcc
Confidence 99999984 33455543 456667777754
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.96 E-value=3.9e-10 Score=125.87 Aligned_cols=109 Identities=14% Similarity=0.129 Sum_probs=92.4
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCC--CCC-CCCCCCCCcEEEecCccCCCCCCCC-CCCCCcc
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG--PLP-DMSRLIDLRIVHLENNELTGSLPSY-MGSLPNL 234 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p-~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L 234 (679)
..++|+.|+|++|.+++.+|..++++++|+.|+|++|+|++ .+| .+.++++|+.|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 45689999999999998899999999999999999999997 345 4889999999999999999768865 7888999
Q ss_pred ceecccccCCCCCCCccccCCceeeeecCCCCc
Q 005750 235 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 235 ~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~ 267 (679)
+.|+|++|++++.+|..+...+..+.+++|...
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 999999999988888877666777777777543
No 354
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.96 E-value=1e-09 Score=126.65 Aligned_cols=85 Identities=26% Similarity=0.320 Sum_probs=46.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
++|+.|+|++|++++..+..|+++++|++|+|++|.+++.+|. |+++++|+.|+|++|++++..+..|+.+++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 3566666666666654444566666666666665555555553 555555555555555555222224555555555555
Q ss_pred cccCCC
Q 005750 240 ENNSFV 245 (679)
Q Consensus 240 ~~N~l~ 245 (679)
++|+++
T Consensus 105 ~~n~l~ 110 (680)
T 1ziw_A 105 MSNSIQ 110 (680)
T ss_dssp CSSCCC
T ss_pred CCCccC
Confidence 555555
No 355
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.95 E-value=1.9e-10 Score=119.65 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=75.8
Q ss_pred CCceEEEEcCCCccccc--CC--ccccCCCCCCEEECCCCcCCCCCC---C-CCCCCCCcEEEecCccCCCCCCCCCCCC
Q 005750 160 PPRITKIALSGKNLKGE--IP--PELKNMEALTELWLDGNFLTGPLP---D-MSRLIDLRIVHLENNELTGSLPSYMGSL 231 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~--~p--~~~~~l~~L~~L~L~~N~l~~~~p---~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l 231 (679)
.++|+.|+|++|++.+. ++ ..++++++|++|+|++|+|+...+ . +.++++|+.|+|++|+|++.+|..++.+
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 45777788887777653 22 224677777777777777764433 1 4677888888888888887777777776
Q ss_pred ---CccceecccccCCCCCCCccccCCceeeeecCCCCc
Q 005750 232 ---PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 232 ---~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~ 267 (679)
++|++|+|++|+|+ .+|..++..+..+.+++|...
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLN 285 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCC
Confidence 58888888888888 788877766677777777543
No 356
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.95 E-value=3.2e-10 Score=118.05 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=62.0
Q ss_pred CceEEEEcCCCccccc--CCccc--cCCCCCCEEECCCCcCCCCC--C-C-CCCCCCCcEEEecCccCCCCCC-CCCCCC
Q 005750 161 PRITKIALSGKNLKGE--IPPEL--KNMEALTELWLDGNFLTGPL--P-D-MSRLIDLRIVHLENNELTGSLP-SYMGSL 231 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~--~p~~~--~~l~~L~~L~L~~N~l~~~~--p-~-~~~l~~L~~L~l~~N~l~g~~p-~~~~~l 231 (679)
++|+.|+|++|++.|. +|..+ +++++|+.|+|++|+|++.. + . +.++++|+.|+|++|++++.+| ..+..+
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 4666666666666654 23343 66666666666666666422 2 2 3456666666666666665554 334556
Q ss_pred CccceecccccCCCCCCCccccCCceeeeecCCC
Q 005750 232 PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 232 ~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
++|++|+|++|+|+ .+|..++..+..+.+++|.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNR 285 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCC
Confidence 66666666666666 6666665444555556554
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.93 E-value=8.5e-10 Score=123.92 Aligned_cols=109 Identities=25% Similarity=0.364 Sum_probs=67.9
Q ss_pred CCCCCC--CCCceE-EEeCCCCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCc
Q 005750 142 GDPCVP--VPWEWV-TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENN 218 (679)
Q Consensus 142 ~~~c~~--~~w~~~-~c~~~~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N 218 (679)
++||.. ..|.++ .|.+. +|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+. +| ..+++|+.|+|++|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~~---~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N 110 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLIN---QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDN 110 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHHT---TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSS
T ss_pred CCccccccchhhhccccccC---CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCC
Confidence 456632 147777 67653 57777777777775 666553 667777777777774 33 44666777777777
Q ss_pred cCCCCCCCCCCCCCccceecccccCCCCCCCccccCCceeeeecCCC
Q 005750 219 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 219 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
+|++ +|. +.. +|+.|+|++|+|++ +|. ....+..+.+++|.
T Consensus 111 ~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 111 RLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQ 151 (571)
T ss_dssp CCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred CCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCc
Confidence 7764 666 544 66666666666663 665 44444555555554
No 358
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.93 E-value=9.2e-10 Score=109.70 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=74.9
Q ss_pred CceEEEEcCC-CcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCc---EEEecCc-cCCCCCCCCCCCCCccc
Q 005750 161 PRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLR---IVHLENN-ELTGSLPSYMGSLPNLQ 235 (679)
Q Consensus 161 ~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~---~L~l~~N-~l~g~~p~~~~~l~~L~ 235 (679)
++|+.|+|++ |++++..+..|.++++|+.|+|++|.|++ +|.+.++++|+ .|+|++| ++++..+..|..+++|+
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 4788888887 88886555677888888888888888877 44477777777 8888888 77744445677888888
Q ss_pred -eecccccCCCCCCCccccCC--ceeeeecCCC
Q 005750 236 -ELHIENNSFVGEIPPALLTG--KVIFKYDNNP 265 (679)
Q Consensus 236 -~L~l~~N~l~g~ip~~~~~~--~~~~~~~~n~ 265 (679)
.|++++|+++ .+|...+.. +..+.+++|+
T Consensus 159 ~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred eEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8888888887 777765543 3455666664
No 359
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.92 E-value=4.1e-10 Score=124.80 Aligned_cols=106 Identities=20% Similarity=0.143 Sum_probs=78.0
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC--C---------------CCCCCCcEEEecCccCC
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD--M---------------SRLIDLRIVHLENNELT 221 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~---------------~~l~~L~~L~l~~N~l~ 221 (679)
..++|+.|+|++|.+++..| |+.+++|+.|+|++|.|++.++. + ..+++|+.|+|++|+|+
T Consensus 56 ~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 56 PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT 133 (487)
T ss_dssp TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCC
T ss_pred CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCC
Confidence 34688889999998887665 88888888888888877664321 1 23567788888888888
Q ss_pred CCCCCCCCCCCccceecccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 222 GSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 222 g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
+..|..++.+++|+.|+|++|.|++.+|..++ ..+..+.+++|..
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 77787888888888888888888877776664 3456666777654
No 360
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.91 E-value=2e-09 Score=114.31 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=106.3
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEec--CCc-chhHHHHHHHHHHHHhcc--CCCccccccccccc---ceEEEEEE
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYE 433 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~---~~~~lV~E 433 (679)
.+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 357899999999999876 4678888875 322 123457888999999996 45678888888765 45899999
Q ss_pred ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 005750 434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC------------------------------------- 476 (679)
Q Consensus 434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~------------------------------------- 476 (679)
|++|..+.+.. ...++......++.+++++|+.||+..
T Consensus 122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99998775422 234678888899999999999999720
Q ss_pred ------------------CCCccccCCCCCCccccCCCc--EEEeeccCccc
Q 005750 477 ------------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQ 508 (679)
Q Consensus 477 ------------------~~~ivH~Dlkp~NIll~~~~~--~kL~Dfgla~~ 508 (679)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987653 68999998864
No 361
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.91 E-value=2.2e-09 Score=120.92 Aligned_cols=86 Identities=19% Similarity=0.346 Sum_probs=56.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCC-CCCCCCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~ 238 (679)
++|+.|+|++|.+++..|..|+++++|++|+|++|++++.++ .++++++|+.|+|++|++++ .+|..++++++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~ 155 (570)
T 2z63_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (570)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred hhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEe
Confidence 466666666666665555666666666666666666666655 46666666666666666664 3566666666666666
Q ss_pred ccccCCCC
Q 005750 239 IENNSFVG 246 (679)
Q Consensus 239 l~~N~l~g 246 (679)
+++|++++
T Consensus 156 l~~n~l~~ 163 (570)
T 2z63_A 156 LSSNKIQS 163 (570)
T ss_dssp CTTSCCCE
T ss_pred CcCCccce
Confidence 66666663
No 362
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=114.85 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=76.1
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCC--CCCCCCccce
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQE 236 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~ 236 (679)
.++|+.|+|++|++++..|..|+++++|++|+|++|+|++.++. |.++++|+.|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 35788888888888877777788888888888888888877665 788888888888888888 5665 6778888888
Q ss_pred ecccccC-CCCCCCccccC---CceeeeecCCCC
Q 005750 237 LHIENNS-FVGEIPPALLT---GKVIFKYDNNPK 266 (679)
Q Consensus 237 L~l~~N~-l~g~ip~~~~~---~~~~~~~~~n~~ 266 (679)
|++++|+ ++ .+++..+. .+..+.+++|..
T Consensus 154 L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 154 LRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp EEEEESSSCC-EECTTTTTTCCEEEEEEEEETTC
T ss_pred EECCCCcccc-ccCHHHccCCCCCCEEECCCCCc
Confidence 8888884 44 55443332 334556666643
No 363
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.91 E-value=1.8e-09 Score=114.28 Aligned_cols=107 Identities=19% Similarity=0.181 Sum_probs=87.9
Q ss_pred CCCCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC--CCCCCCCCcE-EE
Q 005750 146 VPVPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRI-VH 214 (679)
Q Consensus 146 ~~~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~-L~ 214 (679)
|.|.|..|.|+... +.+++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+| .|.+|++|+. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 34567789998632 3579999999999994444579999999999999999988776 3899999775 77
Q ss_pred ecCccCCCCCCCCCCCCCccceecccccCCCCCCCcccc
Q 005750 215 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL 253 (679)
Q Consensus 215 l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~ 253 (679)
+++|+|++..|..|..+++|++|++++|+++ .+|+..+
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~ 124 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHK 124 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTT
T ss_pred ccCCcccccCchhhhhccccccccccccccc-cCCchhh
Confidence 7889999666788999999999999999999 5665443
No 364
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.85 E-value=2e-09 Score=111.82 Aligned_cols=84 Identities=17% Similarity=0.198 Sum_probs=47.5
Q ss_pred ceEEEEcCCCcccccCCccc--cCCCCCCEEECCCCcCCCCCCC-----CCCCCCCcEEEecCccCCCCCCCCCCCCCcc
Q 005750 162 RITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 234 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p~-----~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 234 (679)
+|+.|+|++|++++.+|..+ .++++|+.|+|++|.+++..|. +..+++|+.|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 35555666666655555555 5555666666666665554431 3345556666666666555555555555566
Q ss_pred ceecccccCCC
Q 005750 235 QELHIENNSFV 245 (679)
Q Consensus 235 ~~L~l~~N~l~ 245 (679)
++|+|++|++.
T Consensus 172 ~~L~Ls~N~l~ 182 (310)
T 4glp_A 172 TSLDLSDNPGL 182 (310)
T ss_dssp CEEECCSCTTC
T ss_pred CEEECCCCCCc
Confidence 66666666554
No 365
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.84 E-value=2e-09 Score=113.47 Aligned_cols=104 Identities=18% Similarity=0.316 Sum_probs=71.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|++++ +|+ +..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++ +| .+..+++|+.|++
T Consensus 220 ~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEEC
Confidence 3577888888888874 333 77778888888888877764 567777777777777777774 43 4677777777777
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPPALL--TGKVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~ 268 (679)
++|++++..|..+. ..+..+.+++|+...
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 77777755554433 244566677776544
No 366
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.83 E-value=3.6e-09 Score=108.88 Aligned_cols=102 Identities=23% Similarity=0.388 Sum_probs=78.5
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|++++ + +.+..+++|+.|+|++|+|++. +.+.++++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 4578888898888885 3 5688888899999999888886 678888889999999998885444 888888999999
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPPALL--TGKVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~~~~--~~~~~~~~~~n~~~~ 268 (679)
++|+++ .+|. +. ..+..+.+++|+..+
T Consensus 186 ~~N~i~-~l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 186 SKNHIS-DLRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCCcCC-CChh-hccCCCCCEEECcCCcccC
Confidence 999888 5654 32 244566677776443
No 367
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.83 E-value=4.9e-09 Score=107.93 Aligned_cols=101 Identities=24% Similarity=0.319 Sum_probs=64.2
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++. +.+.++++|+.|+|++|++++ + ..++.+++|+.|+|
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEc
Confidence 3467777777777764 33 377777777777777777764 556777777777777777774 3 45677777777777
Q ss_pred cccCCCCCCCccccCCceeeeecCCC
Q 005750 240 ENNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
++|++++..|-.-...+..+.+++|.
T Consensus 164 ~~N~l~~~~~l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 164 EDNQISDIVPLAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred cCCccccchhhcCCCccCEEECCCCc
Confidence 77777743331112234555666664
No 368
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.83 E-value=5.1e-09 Score=108.68 Aligned_cols=102 Identities=25% Similarity=0.438 Sum_probs=81.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|++++ +|. +..+++|+.|+|++|.+++..+ +.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEEC
Confidence 4689999999999985 443 8999999999999999988766 8899999999999999994 555 889999999999
Q ss_pred cccCCCCCCCc-cccCCceeeeecCCCCc
Q 005750 240 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~-~~~~~~~~~~~~~n~~~ 267 (679)
++|+++ .+|. .-...+..+.+++|...
T Consensus 181 ~~n~l~-~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 181 DDNKIS-DISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCC-CCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCccC-cChhhcCCCCCCEEEccCCccC
Confidence 999998 4554 22335566777777644
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.82 E-value=7.6e-09 Score=104.81 Aligned_cols=101 Identities=26% Similarity=0.322 Sum_probs=65.4
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|+|++ +|+ +.+|++|+.|+|++|+|++.++ +.. ++|+.|+|++|++++ +| .++.+++|+.|+|
T Consensus 62 l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 62 FTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 3577788888888774 343 7778888888888888777443 333 777777777777774 43 4677777777777
Q ss_pred cccCCCCCCCc-cccCCceeeeecCCCCc
Q 005750 240 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~-~~~~~~~~~~~~~n~~~ 267 (679)
++|+++ .+|. .-...+..+.+++|...
T Consensus 136 s~N~i~-~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 136 RNNKLK-SIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp TTSCCC-BCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCcCC-CChHHccCCCCCEEECCCCcCc
Confidence 777777 3442 11223455566666543
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.82 E-value=7.5e-09 Score=104.84 Aligned_cols=100 Identities=20% Similarity=0.302 Sum_probs=84.3
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++.+| +.++++|+.|+|++|+++ .+|.... ++|+.|+|
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFL 113 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEEC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEc
Confidence 368999999999999 677 79999999999999999999888 999999999999999999 5666444 99999999
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCCc
Q 005750 240 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 267 (679)
++|+++ .+|. +. ..+..+.+++|...
T Consensus 114 ~~N~l~-~~~~-l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 114 DNNELR-DTDS-LIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CSSCCS-BSGG-GTTCTTCCEEECTTSCCC
T ss_pred cCCccC-CChh-hcCcccccEEECCCCcCC
Confidence 999999 4553 32 34567778887543
No 371
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=1.4e-09 Score=112.65 Aligned_cols=185 Identities=23% Similarity=0.261 Sum_probs=121.7
Q ss_pred cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCC--cccccccccccc---eEEEEEEecC
Q 005750 363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 436 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpn--Iv~l~~~~~~~~---~~~lV~E~~~ 436 (679)
+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..++||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 568899999999864 56889986532 34567889999999883 332 344444443333 3478999999
Q ss_pred CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005750 437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC---------------------------------------- 476 (679)
Q Consensus 437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~---------------------------------------- 476 (679)
|.++.+... ..++..++..++.++++.|+.||+..
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988865332 23677777888899999999988610
Q ss_pred ---------------CCCccccCCCCCCccccC--CCcEEEeeccCccccccCccccccccc-----CC-------ccc-
Q 005750 477 ---------------NPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVAR-----GT-------VGY- 526 (679)
Q Consensus 477 ---------------~~~ivH~Dlkp~NIll~~--~~~~kL~Dfgla~~~~~~~~~~~~~~~-----gt-------~~y- 526 (679)
...++|||++|.||+++. +..+.|+||+.+..-..... ...... +. ..|
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-FISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-HHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-HHHHHhhccccCHHHHHHHHHHcC
Confidence 135799999999999998 45678999998765322111 000000 00 011
Q ss_pred -cC-CcccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005750 527 -LD-PEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 561 (679)
Q Consensus 527 -~a-PE~l~~~~~s~ksDVwSlGvll~elltG~~pf~ 561 (679)
.. |+... ......+.|+++.++|.+.+|..+|.
T Consensus 254 ~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 254 HKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 11110 01123689999999999999988764
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=9.9e-09 Score=115.26 Aligned_cols=96 Identities=21% Similarity=0.234 Sum_probs=65.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCcc------
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL------ 234 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L------ 234 (679)
++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++.++ |. ++|+.|+|++|+|+ .+|. +.. +|
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~ 208 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEET 208 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------C
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhccccc
Confidence 567777777777774 665 56777777777777777444 55 77777777777777 7777 554 66
Q ss_pred -ceecccccCCCCCCCccccC--CceeeeecCCCCcc
Q 005750 235 -QELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLH 268 (679)
Q Consensus 235 -~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~ 268 (679)
+.|+|++|+|+ .||..++. .+..+.+++|+..+
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 77777777777 67776654 44566777776654
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.78 E-value=6.3e-09 Score=117.97 Aligned_cols=101 Identities=23% Similarity=0.388 Sum_probs=79.1
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|.|++ + +.+..|++|+.|+|++|+|++. +.+..|++|+.|+|++|+|++..| +..|++|+.|+|
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 4688899999999885 3 4688889999999999998887 678888999999999999986656 888889999999
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCCc
Q 005750 240 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 267 (679)
++|+|+ .+|. +. ..+..+.+++|+..
T Consensus 183 s~N~i~-~l~~-l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 183 SKNHIS-DLRA-LAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEECCSEEEE
T ss_pred cCCCCC-CChH-HccCCCCCEEEccCCcCc
Confidence 999888 4543 22 24556667776543
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.77 E-value=8.1e-09 Score=117.10 Aligned_cols=100 Identities=24% Similarity=0.317 Sum_probs=60.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|.|++ +| .|..|++|+.|+|++|+|++. +.+.+|++|+.|+|++|+|++. ..++.|++|+.|+|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 161 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECC
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECc
Confidence 466666666666663 33 566666666666666666653 4566666677777777766643 456666777777777
Q ss_pred ccCCCCCCCccccCCceeeeecCCC
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNP 265 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~ 265 (679)
+|+|++..|-.-+..+..+.+++|.
T Consensus 162 ~N~l~~~~~l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 162 DNQISDIVPLAGLTKLQNLYLSKNH 186 (605)
T ss_dssp SSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CCcCCCchhhccCCCCCEEECcCCC
Confidence 7777644442222344555566654
No 375
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.76 E-value=1.7e-09 Score=112.83 Aligned_cols=100 Identities=27% Similarity=0.306 Sum_probs=77.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|++++..|..|.++++|+.|+|++|.+++.+| +..+++|+.|+|++|++++ +| .+++|+.|+++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~ 107 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAA 107 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCcccc-cc----CCCCcCEEECC
Confidence 478888898888887767788888889999999888888766 8888888888888888883 33 33788888888
Q ss_pred ccCCCCCCCccccCCceeeeecCCCCc
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~~~ 267 (679)
+|+++ .+|...+..+..+.+++|...
T Consensus 108 ~n~l~-~~~~~~~~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 108 NNNIS-RVSCSRGQGKKNIYLANNKIT 133 (317)
T ss_dssp SSCCS-EEEECCCSSCEEEECCSSCCC
T ss_pred CCccC-CcCccccCCCCEEECCCCCCC
Confidence 88887 455555666677777777543
No 376
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.75 E-value=8.1e-11 Score=113.96 Aligned_cols=104 Identities=24% Similarity=0.222 Sum_probs=78.0
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|++++ +| .+.++++|+.|+|++|.|+..++.+..+++|+.|+|++|++++ +| .++.+++|+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 3578888888888885 77 8888888888888888888544446677888888888888884 66 5778888888888
Q ss_pred cccCCCCCCCc--cc--cCCceeeeecCCCCcc
Q 005750 240 ENNSFVGEIPP--AL--LTGKVIFKYDNNPKLH 268 (679)
Q Consensus 240 ~~N~l~g~ip~--~~--~~~~~~~~~~~n~~~~ 268 (679)
++|+++ .+|. .+ ...+..+.+++|+..|
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCCcCC-chhHHHHHhcCCCCCEEEecCCcccc
Confidence 888887 4443 22 2245667777776543
No 377
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.74 E-value=8.5e-09 Score=113.46 Aligned_cols=82 Identities=30% Similarity=0.415 Sum_probs=52.7
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|+|++|.+++..+ +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++..| ++.+++|+.|++
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 3567777777777774333 6667777777777777766544 6666666666666666665444 556666666666
Q ss_pred cccCCCC
Q 005750 240 ENNSFVG 246 (679)
Q Consensus 240 ~~N~l~g 246 (679)
++|++++
T Consensus 339 ~~n~l~~ 345 (466)
T 1o6v_A 339 YNNKVSD 345 (466)
T ss_dssp CSSCCCC
T ss_pred CCCccCC
Confidence 6666663
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.72 E-value=2.8e-08 Score=109.01 Aligned_cols=95 Identities=25% Similarity=0.262 Sum_probs=48.4
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|++++ +| ++++++|++|+|++|.|++. | ++++++|+.|+|++|++++ +| ++.+++|++|+++
T Consensus 64 ~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 355555555555553 22 55555555555555555554 2 5555555555555555553 33 5555555555555
Q ss_pred ccCCCCCCCccccCCceeeeecCC
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNN 264 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n 264 (679)
+|++++ +|-.-...+..+.+++|
T Consensus 136 ~N~l~~-l~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 136 RNTLTE-IDVSHNTQLTELDCHLN 158 (457)
T ss_dssp TSCCSC-CCCTTCTTCCEEECTTC
T ss_pred CCccce-eccccCCcCCEEECCCC
Confidence 555553 33222233344444444
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.70 E-value=3.7e-08 Score=111.92 Aligned_cols=75 Identities=28% Similarity=0.390 Sum_probs=41.8
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--Cceeeeec
Q 005750 185 EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYD 262 (679)
Q Consensus 185 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~ 262 (679)
++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.. .+..+.++
T Consensus 221 ~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 45555566666555533 33455666666666666 4555 4456666666666666 56655432 33445556
Q ss_pred CCCCc
Q 005750 263 NNPKL 267 (679)
Q Consensus 263 ~n~~~ 267 (679)
+|+..
T Consensus 293 ~N~l~ 297 (622)
T 3g06_A 293 GNPLS 297 (622)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 66543
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.70 E-value=1.8e-08 Score=110.77 Aligned_cols=101 Identities=27% Similarity=0.351 Sum_probs=55.8
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|.+++..| +..+++|+.|+|++|.+++.++ +..+++|+.|+|++|++++..| ++.+++|+.|+|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 355555555555554333 5555666666666666655544 5556666666666666664332 5566666666666
Q ss_pred ccCCCCCCCccccCCceeeeecCCCC
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNPK 266 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~~ 266 (679)
+|++++..|-.-...+..+.+.+|+.
T Consensus 318 ~n~l~~~~~~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 318 FNNISDISPVSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp SSCCSCCGGGGGCTTCCEEECCSSCC
T ss_pred CCcCCCchhhccCccCCEeECCCCcc
Confidence 66666444433333445555555543
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.67 E-value=5.1e-08 Score=106.85 Aligned_cols=97 Identities=27% Similarity=0.314 Sum_probs=78.2
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 240 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 240 (679)
++|+.|+|++|++++ +| .|+++++|++|+|++|++++.+..+ .+|+.|+|++|++++ +| .++.+++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 589999999999995 78 6999999999999999999844333 489999999999995 77 58999999999999
Q ss_pred ccCCCCCCCccccCCceeeeecCCCC
Q 005750 241 NNSFVGEIPPALLTGKVIFKYDNNPK 266 (679)
Q Consensus 241 ~N~l~g~ip~~~~~~~~~~~~~~n~~ 266 (679)
+|+++ .+|... .....+.+++|..
T Consensus 204 ~N~l~-~l~~~~-~~L~~L~l~~n~l 227 (454)
T 1jl5_A 204 NNSLK-KLPDLP-LSLESIVAGNNIL 227 (454)
T ss_dssp SSCCS-SCCCCC-TTCCEEECCSSCC
T ss_pred CCcCC-cCCCCc-CcccEEECcCCcC
Confidence 99998 466543 3556667777643
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.67 E-value=3.6e-08 Score=108.15 Aligned_cols=90 Identities=19% Similarity=0.248 Sum_probs=73.4
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
..++|+.|+|++|++++ +| ++.+++|+.|+|++|+|++. +++++++|+.|+|++|+|++ +| ++.+++|+.|+
T Consensus 168 ~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp TCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred cCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 34688999999999986 55 88899999999999999887 48888999999999999996 77 88889999999
Q ss_pred ccccCCCCCCCccccCCce
Q 005750 239 IENNSFVGEIPPALLTGKV 257 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~~~ 257 (679)
+++|++++ +|...+..+.
T Consensus 240 l~~N~l~~-~~~~~l~~L~ 257 (457)
T 3bz5_A 240 CSVNPLTE-LDVSTLSKLT 257 (457)
T ss_dssp CCSSCCSC-CCCTTCTTCC
T ss_pred eeCCcCCC-cCHHHCCCCC
Confidence 99999985 5544444333
No 383
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.67 E-value=5.5e-10 Score=108.04 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=85.5
Q ss_pred CceEEEEcCCCcccccCCc------cccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCcc
Q 005750 161 PRITKIALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL 234 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 234 (679)
.+++.++|+++.++|.+|. .|+++++|+.|+|++|.|++ +|.+.++++|+.|+|++|+++ .+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 3667777888888888887 99999999999999999999 459999999999999999999 899988889999
Q ss_pred ceecccccCCCCCCCccccC--CceeeeecCCCC
Q 005750 235 QELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 266 (679)
Q Consensus 235 ~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~ 266 (679)
+.|+|++|+++ .+| .+.. .+..+.+++|..
T Consensus 96 ~~L~L~~N~l~-~l~-~~~~l~~L~~L~l~~N~i 127 (198)
T 1ds9_A 96 EELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKI 127 (198)
T ss_dssp SEEEEEEEECC-CHH-HHHHHHHSSEEEESEEEC
T ss_pred CEEECcCCcCC-cCC-ccccCCCCCEEECCCCcC
Confidence 99999999999 466 3322 345666666653
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.66 E-value=8e-08 Score=109.11 Aligned_cols=54 Identities=28% Similarity=0.360 Sum_probs=39.3
Q ss_pred CCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccCCceeeeecCCCCc
Q 005750 208 IDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 208 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~ 267 (679)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|+ .+|. ....+..+.+++|...
T Consensus 221 ~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCC-cCCc-ccccCcEEeCCCCCCC
Confidence 67888888888888 466 45577888888888888 6777 4455666777777544
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.64 E-value=2.5e-08 Score=109.37 Aligned_cols=62 Identities=27% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCC--CCCcccc
Q 005750 185 EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVG--EIPPALL 253 (679)
Q Consensus 185 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~ 253 (679)
++|+.|+|++|+|++.++. +++|+.|+|++|+++ .+|. .+++|+.|++++|+++| .+|.++.
T Consensus 317 ~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 317 PSLEELNVSNNKLIELPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp TTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCC
T ss_pred CcCCEEECCCCcccccccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHH
Confidence 4777888888887774333 467778888888777 5776 36777788888888776 6666553
No 386
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.62 E-value=2.7e-08 Score=104.67 Aligned_cols=102 Identities=19% Similarity=0.256 Sum_probs=73.8
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 239 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 239 (679)
.++|+.|++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++ + ..+..+++|+.|++
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 4578888888888875433 7788888888888888887766 7788888888888888874 4 35777888888888
Q ss_pred cccCCCCCCCc-cccCCceeeeecCCCCc
Q 005750 240 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 267 (679)
Q Consensus 240 ~~N~l~g~ip~-~~~~~~~~~~~~~n~~~ 267 (679)
++|+++ .+|. .-...+..+.+++|+..
T Consensus 273 ~~n~l~-~~~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 273 GSNQIS-DISVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp CSSCCC-CCGGGGGCTTCSEEECCSSCCC
T ss_pred cCCccC-CChhhcCCCCCCEEECcCCcCC
Confidence 888887 4543 11234566677777654
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.53 E-value=5e-09 Score=112.29 Aligned_cols=84 Identities=21% Similarity=0.351 Sum_probs=39.2
Q ss_pred ceEEEEcCCCccc-ccCC---ccccCCCCCCEEECCCCcCC--C---CCC-CCCCCCCCcEEEecCccCC----CCCCCC
Q 005750 162 RITKIALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPSY 227 (679)
Q Consensus 162 ~l~~L~L~~n~l~-g~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p-~~~~l~~L~~L~l~~N~l~----g~~p~~ 227 (679)
+|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | ..| .+.++++|+.|+|++|+|+ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 4445555555544 2233 23444445555555555444 2 233 3444455555555555543 344444
Q ss_pred CCCCCccceecccccCCC
Q 005750 228 MGSLPNLQELHIENNSFV 245 (679)
Q Consensus 228 ~~~l~~L~~L~l~~N~l~ 245 (679)
+..+++|+.|+|++|.++
T Consensus 240 l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp GGGCTTCCEEECTTCCCC
T ss_pred HccCCCcCEEECCCCCCc
Confidence 444455555555555544
No 388
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.51 E-value=5.7e-09 Score=111.82 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=90.7
Q ss_pred CceEEEEcCCCccc--c---cCCccccCCCCCCEEECCCCcCC----CCCC-CCCCCCCCcEEEecCccCCCC----CCC
Q 005750 161 PRITKIALSGKNLK--G---EIPPELKNMEALTELWLDGNFLT----GPLP-DMSRLIDLRIVHLENNELTGS----LPS 226 (679)
Q Consensus 161 ~~l~~L~L~~n~l~--g---~~p~~~~~l~~L~~L~L~~N~l~----~~~p-~~~~l~~L~~L~l~~N~l~g~----~p~ 226 (679)
++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.|+ +.+| .+..+++|+.|+|++|+|++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 58999999999998 4 35558999999999999999996 5566 589999999999999999966 677
Q ss_pred CC--CCCCccceecccccCCCC----CCCccc---cCCceeeeecCCCCcc
Q 005750 227 YM--GSLPNLQELHIENNSFVG----EIPPAL---LTGKVIFKYDNNPKLH 268 (679)
Q Consensus 227 ~~--~~l~~L~~L~l~~N~l~g----~ip~~~---~~~~~~~~~~~n~~~~ 268 (679)
.+ +.+++|+.|+|++|.+++ .+|..+ +..+..+.+.+|+..+
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 76 459999999999999996 488876 3566788888887553
No 389
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=3e-07 Score=95.76 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=98.4
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccC----CCcccccccccccceEEEEEEecCC
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH----RNLVPLIGYCEEEHQRILVYEYMHN 437 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----pnIv~l~~~~~~~~~~~lV~E~~~~ 437 (679)
.+.++.|....||+. |+.+++|+... ......+.+|.++++.+.+ ..+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 467899999999998 67789998643 2224568899999999865 123444444 456899999999
Q ss_pred CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 005750 438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCN---------------------------------------- 477 (679)
Q Consensus 438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~---------------------------------------- 477 (679)
.++.+... ..++..+...++.++++.|+.||+...
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864332 235667777888888888888885211
Q ss_pred --------------------CCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 478 --------------------PGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 478 --------------------~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999866679999998865
No 390
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=5.6e-08 Score=97.97 Aligned_cols=66 Identities=26% Similarity=0.411 Sum_probs=41.8
Q ss_pred cCCCCCCEEECCCCcCCCC--CCC-CCCCCCCcEEEecCccCCCCCCCCCCCCC--ccceecccccCCCCCCC
Q 005750 182 KNMEALTELWLDGNFLTGP--LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP--NLQELHIENNSFVGEIP 249 (679)
Q Consensus 182 ~~l~~L~~L~L~~N~l~~~--~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~g~ip 249 (679)
.+|++|+.|+|++|+|+++ +|+ +..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 4566777777777777764 333 55677777777777777643 2233333 67777777777776665
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.42 E-value=2e-08 Score=106.58 Aligned_cols=105 Identities=18% Similarity=0.189 Sum_probs=69.3
Q ss_pred CceEEEEcCCCcccccCC----ccccCCC-CCCEEECCCCcCCCCCC-CCCCC-----CCCcEEEecCccCCCCCCCCCC
Q 005750 161 PRITKIALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLP-DMSRL-----IDLRIVHLENNELTGSLPSYMG 229 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~L~~N~l~~~~p-~~~~l-----~~L~~L~l~~N~l~g~~p~~~~ 229 (679)
.+|+.|+|++|.+++..+ ..|.+++ +|+.|+|++|.|++..+ .+..+ ++|+.|+|++|++++..+..++
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357788888888775555 5677777 78888888888777765 35543 7788888888887765555433
Q ss_pred C----C-CccceecccccCCCCCCCcccc-------CCceeeeecCCC
Q 005750 230 S----L-PNLQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 265 (679)
Q Consensus 230 ~----l-~~L~~L~l~~N~l~g~ip~~~~-------~~~~~~~~~~n~ 265 (679)
. + ++|+.|+|++|++++..+..+. ..+..+.+++|.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 3 3 6788888888887744333221 244556666664
No 392
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41 E-value=7.7e-07 Score=90.04 Aligned_cols=135 Identities=17% Similarity=0.111 Sum_probs=99.1
Q ss_pred ccCcCccE-EEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEEecCCCcH
Q 005750 364 KIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 364 ~LG~G~~g-~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +-.+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34445554 68988765 467899998653 34567888999999884 33467788888888899999999999888
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 005750 441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG--------------------------------------------- 475 (679)
Q Consensus 441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~--------------------------------------------- 475 (679)
.+..... ......+..+++..|+.||+.
T Consensus 108 ~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 7765421 122345677888888888851
Q ss_pred ----------CCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 476 ----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 476 ----------~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
....++|||+++.||+++.++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999877777999997753
No 393
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=1.6e-06 Score=89.70 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=95.6
Q ss_pred cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCC---Cccccccccc-ccceEEEEEEecCCC
Q 005750 363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 438 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~~~-~~~~~~lV~E~~~~g 438 (679)
+.++.|....||+. |+.+++|+-.. ......+.+|.++|+.+.+. .+.+++.+.. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 46788888999988 56788898532 33456788999999999642 3555666653 455678999999998
Q ss_pred cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 005750 439 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 475 (679)
Q Consensus 439 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~------------------------------------------- 475 (679)
++.+... ..++......++.++++.|+.||+.
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8866322 1234555566666666666666641
Q ss_pred --------------CCCCccccCCCCCCccccC---CCc-EEEeeccCccc
Q 005750 476 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 508 (679)
Q Consensus 476 --------------~~~~ivH~Dlkp~NIll~~---~~~-~kL~Dfgla~~ 508 (679)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 48999997754
No 394
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=1.3e-06 Score=89.54 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=59.3
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCC---CcccccccccccceEEEEEEecCCC
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 438 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~~~~~~~~~lV~E~~~~g 438 (679)
.+.|+.|.++.||++...+|+.++||+...........+..|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3679999999999999888999999996543333346789999999999764 567777653 358999999988
Q ss_pred cH
Q 005750 439 TL 440 (679)
Q Consensus 439 sL 440 (679)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 395
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.30 E-value=1.1e-07 Score=99.33 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=61.4
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCC-CC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.+++.|+|++|.+.+..+. +..+++|+.|+|++|.+++. +| .+.++++|+.|+|++|++++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4566666777666654443 45666777777777766654 44 366666777777777766666666666667777777
Q ss_pred cccc-CCCCC-CCccc--cCCceeeeecCC
Q 005750 239 IENN-SFVGE-IPPAL--LTGKVIFKYDNN 264 (679)
Q Consensus 239 l~~N-~l~g~-ip~~~--~~~~~~~~~~~n 264 (679)
|++| .+++. +|..+ ...+..+.+++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 7766 45532 33322 123344555555
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=1.1e-07 Score=95.93 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=66.2
Q ss_pred CCceEEEEcCCCcccc--cCCccccCCCCCCEEECCCCcCCCCCCCCCCCC--CCcEEEecCccCCCCCCC-------CC
Q 005750 160 PPRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLPDMSRLI--DLRIVHLENNELTGSLPS-------YM 228 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~--~L~~L~l~~N~l~g~~p~-------~~ 228 (679)
.++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. .++..+. +|+.|+|++|.+++.+|. .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 5689999999999998 6778889999999999999999987 3333333 999999999999988874 36
Q ss_pred CCCCccceecc
Q 005750 229 GSLPNLQELHI 239 (679)
Q Consensus 229 ~~l~~L~~L~l 239 (679)
..+++|+.||=
T Consensus 248 ~~~P~L~~LDg 258 (267)
T 3rw6_A 248 ERFPKLLRLDG 258 (267)
T ss_dssp HHCTTCCEESS
T ss_pred HHCcccCeECC
Confidence 77889988763
No 397
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.24 E-value=1.7e-06 Score=91.19 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=58.7
Q ss_pred ceEEEEcCC-CcccccCCccccCCC-CCCEEECCCCcCCCCCCCCCCCCCCcEEEecC-ccCCCCCCC-CCCCCCcccee
Q 005750 162 RITKIALSG-KNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN-NELTGSLPS-YMGSLPNLQEL 237 (679)
Q Consensus 162 ~l~~L~L~~-n~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~-N~l~g~~p~-~~~~l~~L~~L 237 (679)
++..|++.+ +++....+..|..+. .|+.|+|++|+|+.+++......+|+.|++++ |+++ .||. .|..+++|+.|
T Consensus 129 ~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~L 207 (350)
T 4ay9_X 129 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVIL 207 (350)
T ss_dssp SCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEE
T ss_pred hhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchh
Confidence 455666644 445433333455553 46667777777766665555556667777664 3444 5554 35666777777
Q ss_pred cccccCCCCCCCccccCCceeeeecCC
Q 005750 238 HIENNSFVGEIPPALLTGKVIFKYDNN 264 (679)
Q Consensus 238 ~l~~N~l~g~ip~~~~~~~~~~~~~~n 264 (679)
+|++|+|+ .+|...+.++..+...++
T Consensus 208 dLs~N~l~-~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 208 DISRTRIH-SLPSYGLENLKKLRARST 233 (350)
T ss_dssp ECTTSCCC-CCCSSSCTTCCEEECTTC
T ss_pred hcCCCCcC-ccChhhhccchHhhhccC
Confidence 77777776 666666555555444433
No 398
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.24 E-value=1.1e-07 Score=99.40 Aligned_cols=111 Identities=19% Similarity=0.297 Sum_probs=92.5
Q ss_pred CCceEEEeCCCCCceEEEEcCCCcccccCCccccCC--CCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCC-CC
Q 005750 149 PWEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNM--EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGS-LP 225 (679)
Q Consensus 149 ~w~~~~c~~~~~~~l~~L~L~~n~l~g~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~-~p 225 (679)
.|..+.|+ +..++.|+|++|++. |..+..+ ++|+.|+|++|.+++.++.+.++++|+.|+|++|++++. +|
T Consensus 38 ~W~~~~~~---~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASD---ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTC---STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcC---chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 45555442 235789999999987 5678888 999999999999999999988999999999999999976 88
Q ss_pred CCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCC
Q 005750 226 SYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 226 ~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~ 265 (679)
..+..+++|+.|+|++|++++.+|..+.. .+..+.+++|.
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~ 153 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 153 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCC
Confidence 88999999999999999998777765543 45667777774
No 399
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.23 E-value=1e-07 Score=101.07 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=85.6
Q ss_pred EEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC----C-CCCCC-CCcEEEecCccCCCCCCCCCCCC-----Cc
Q 005750 165 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP----D-MSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 233 (679)
Q Consensus 165 ~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p----~-~~~l~-~L~~L~l~~N~l~g~~p~~~~~l-----~~ 233 (679)
.++|++|+++|.+|..+...++|+.|+|++|.|++..+ + +.+++ +|+.|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999988888889999999999999876 3 77888 89999999999998878777775 99
Q ss_pred cceecccccCCCCCCCcccc-------CCceeeeecCCCC
Q 005750 234 LQELHIENNSFVGEIPPALL-------TGKVIFKYDNNPK 266 (679)
Q Consensus 234 L~~L~l~~N~l~g~ip~~~~-------~~~~~~~~~~n~~ 266 (679)
|++|+|++|++++..+..+. ..+..+.+++|..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 121 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDF 121 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcC
Confidence 99999999999966655332 3456677777763
No 400
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.19 E-value=2.6e-06 Score=89.89 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=56.7
Q ss_pred ccc-CcCccEEEEEEEEc-------CCcEEEEEEecCCc---chhHHHHHHHHHHHHhcc-C--CCccccccccccc---
Q 005750 363 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 425 (679)
Q Consensus 363 ~~L-G~G~~g~Vy~a~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~~~~~--- 425 (679)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998765 26789999865432 101245778999998884 3 3567778776654
Q ss_pred ceEEEEEEecCCCcHhh
Q 005750 426 HQRILVYEYMHNGTLRD 442 (679)
Q Consensus 426 ~~~~lV~E~~~~gsL~~ 442 (679)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877654
No 401
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=5e-06 Score=88.09 Aligned_cols=74 Identities=8% Similarity=0.126 Sum_probs=55.8
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC--ccccccccccc-ceEEEEEEecCCC
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNG 438 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~~~-~~~~lV~E~~~~g 438 (679)
.+.++.|....+|+... +++.+++|+.... ..+.+|..+++.+.... +.+++.++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999999876 4889999987542 25888999999986433 45666665543 5689999999987
Q ss_pred cHh
Q 005750 439 TLR 441 (679)
Q Consensus 439 sL~ 441 (679)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 654
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=6.1e-06 Score=86.07 Aligned_cols=92 Identities=15% Similarity=0.085 Sum_probs=79.0
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCc-EEEecCccCCCCCCCCCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++.+.+ .|.++++|+ .|+|++ +++..-+..|.+|++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 58999999999999444456999999999999998 777666 599999999 999999 78733346799999999999
Q ss_pred ccccCCCCCCCccccCC
Q 005750 239 IENNSFVGEIPPALLTG 255 (679)
Q Consensus 239 l~~N~l~g~ip~~~~~~ 255 (679)
+++|+++ .|+...|.+
T Consensus 304 l~~n~i~-~I~~~aF~~ 319 (329)
T 3sb4_A 304 ATGDKIT-TLGDELFGN 319 (329)
T ss_dssp ECSSCCC-EECTTTTCT
T ss_pred eCCCccC-ccchhhhcC
Confidence 9999999 888877754
No 403
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.95 E-value=3.2e-07 Score=100.26 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=79.8
Q ss_pred CCceEEEEcCCCcccccCCccccCC-----CCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccCCCCCCCCCC
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMG 229 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~ 229 (679)
.++|+.|+|++|.+++..+..+... ++|+.|+|++|.+++. ++ .+..+++|+.|+|++|++++..+..+.
T Consensus 283 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 3689999999999876555554433 6899999999998876 34 367788999999999998865554443
Q ss_pred C-----CCccceecccccCCCC----CCCcccc--CCceeeeecCCCCc
Q 005750 230 S-----LPNLQELHIENNSFVG----EIPPALL--TGKVIFKYDNNPKL 267 (679)
Q Consensus 230 ~-----l~~L~~L~l~~N~l~g----~ip~~~~--~~~~~~~~~~n~~~ 267 (679)
. +++|+.|+|++|++++ .+|..+. ..+..+.+++|+..
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 2 6789999999999885 5666543 35567777887643
No 404
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.95 E-value=1.9e-05 Score=82.32 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=80.8
Q ss_pred cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc--CCCccccccc------ccccceEEEEEEe
Q 005750 363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--HRNLVPLIGY------CEEEHQRILVYEY 434 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~------~~~~~~~~lV~E~ 434 (679)
+.|+.|..+.||+....+| .+++|+.... ...+..|..+++.|. .-.+.+++.. ....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677889999987655 5899998752 234445666666663 1233444431 1235677899999
Q ss_pred cCCCcHh--------------hhhcccCC----C-------CCCCHHHH-------------------------------
Q 005750 435 MHNGTLR--------------DRLHGSVN----Q-------KPLDWLTR------------------------------- 458 (679)
Q Consensus 435 ~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~------------------------------- 458 (679)
++|..+. ..++.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11111100 0 00122110
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 459 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 459 ~~i~~qia~aL~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
..+..++..++.+|++ .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 024789999999999999888899999999764
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.93 E-value=1.4e-07 Score=103.09 Aligned_cols=85 Identities=22% Similarity=0.245 Sum_probs=40.8
Q ss_pred CceEEEEcCCCcccccC-----CccccCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccCCCCCCCCCCC
Q 005750 161 PRITKIALSGKNLKGEI-----PPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMGS 230 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 230 (679)
++|+.|+|++|.+++.- +..+..+++|+.|+|++|.|+.. ++ .+.++++|+.|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 35556666666555321 11122455566666666655552 22 2444555555555555554332222221
Q ss_pred -----CCccceecccccCCC
Q 005750 231 -----LPNLQELHIENNSFV 245 (679)
Q Consensus 231 -----l~~L~~L~l~~N~l~ 245 (679)
.++|+.|+|++|.++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~ 326 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFT 326 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCB
T ss_pred HhccCCccceeeEcCCCCCc
Confidence 135555555555554
No 406
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=2.6e-05 Score=83.51 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=49.4
Q ss_pred ccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc-------hhHHHHHHHHHHHHhccC--CC-cccccccccccceEEE
Q 005750 362 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RN-LVPLIGYCEEEHQRIL 430 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--pn-Iv~l~~~~~~~~~~~l 430 (679)
.+.||.|..+.||++... +++.++||....... .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357999999999999765 478899998653221 123456789999988842 33 3345543 2344689
Q ss_pred EEEecCCC
Q 005750 431 VYEYMHNG 438 (679)
Q Consensus 431 V~E~~~~g 438 (679)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 407
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.75 E-value=1.4e-06 Score=92.57 Aligned_cols=84 Identities=25% Similarity=0.256 Sum_probs=40.4
Q ss_pred ceEEEEcCCCcccccCCccc-----cCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccCCCC----CCCC
Q 005750 162 RITKIALSGKNLKGEIPPEL-----KNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGS----LPSY 227 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~----~p~~ 227 (679)
+|+.|+|++|+|+..-...+ ...++|+.|+|++|.|+.. ++ .+..+++|+.|+|++|+|+.. ++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 45555555555543322222 1245555555555555431 11 134455555555555555421 2333
Q ss_pred CCCCCccceecccccCCC
Q 005750 228 MGSLPNLQELHIENNSFV 245 (679)
Q Consensus 228 ~~~l~~L~~L~l~~N~l~ 245 (679)
+..+++|+.|+|++|.|+
T Consensus 207 L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp GGGCSCCCEEECCSSCCC
T ss_pred HhcCCCcCeEECCCCCCC
Confidence 444455555555555554
No 408
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.70 E-value=3.9e-05 Score=82.92 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=49.1
Q ss_pred CCCccccCCCCCCccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCC---CCCchhHHHHHHHHHHHH
Q 005750 477 NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLEL 553 (679)
Q Consensus 477 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~s~ksDVwSlGvll~el 553 (679)
...++|||+++.||+++.++ ++++||+.+..-............-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 37899999999999998776 99999998875332111100000012346666654321 122345666888888887
Q ss_pred HhC
Q 005750 554 ISG 556 (679)
Q Consensus 554 ltG 556 (679)
+.+
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 409
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.66 E-value=0.00016 Score=74.66 Aligned_cols=137 Identities=18% Similarity=0.215 Sum_probs=90.7
Q ss_pred cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc---CCCcccccccccccceEEEEEEecCCCc
Q 005750 363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 439 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lV~E~~~~gs 439 (679)
+.|+.|....+|+.... +..+++|+.... ....+..|.+.|+.|. ...+.+++.++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46899999999999864 678899987532 3567889999999884 3567888888877788999999999875
Q ss_pred Hhh-----------hhcccCC-------------------CCCCCHHHHH---HHH----------------HHHHHHH-
Q 005750 440 LRD-----------RLHGSVN-------------------QKPLDWLTRL---QIA----------------HDAAKGL- 469 (679)
Q Consensus 440 L~~-----------~l~~~~~-------------------~~~l~~~~~~---~i~----------------~qia~aL- 469 (679)
+.. .|+.... .-.-+|.... ++. .+++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 421 1221110 0012344321 111 1122222
Q ss_pred HHHHh-cCCCCccccCCCCCCccccCCCcEEEeecc
Q 005750 470 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 504 (679)
Q Consensus 470 ~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 504 (679)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1246899999999999999887 8899974
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00011 Score=74.79 Aligned_cols=74 Identities=19% Similarity=0.271 Sum_probs=54.8
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-C--CCcccccccccccceEEEEEEecCCC
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEEHQRILVYEYMHNG 438 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~~~~~~~~~lV~E~~~~g 438 (679)
.+.+|.|..+.||+.+..+|+.|++|+...........+..|.+.|+.|. . -.+.+++++. ..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeeccc
Confidence 46789999999999999999999999876544444456888999999884 2 1244444432 237899999876
Q ss_pred c
Q 005750 439 T 439 (679)
Q Consensus 439 s 439 (679)
.
T Consensus 96 ~ 96 (288)
T 3f7w_A 96 P 96 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 411
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=97.62 E-value=2.1e-05 Score=73.90 Aligned_cols=98 Identities=20% Similarity=0.141 Sum_probs=60.3
Q ss_pred cceeecCCceEEEEEec-ccCcccceeeeehhhhcccCCCcceeeecccCcccCCC-CceEEEeecCCcccccccCccc-
Q 005750 2 QTAVVGTEGVLSYRLNL-EDFPANARAFAYFAEIQDLGPSETRKFKLEQPYFADYS-NAVVNIAENANGSYTLYEPSYM- 78 (679)
Q Consensus 2 ~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~f~e~~~~~~~~~r~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~- 78 (679)
|||-... .+++|.. .+....|.+-|||||+.. .+.+.|.||| |.++.- ...|||+...+. ..++.-.|.
T Consensus 58 ~TaR~~~---~~~tY~f~v~~~G~Y~VrLhF~ei~~-~~~~~rvFdV---~ing~~~l~~fdi~~~ag~-~~~~~~~~~~ 129 (174)
T 2jwp_A 58 QTERYNE---DSFGYDIPIKEEGEYVLVLKFAEVYF-AQSQQKVFDV---RVNGHTVVKDLDIFDRVGH-STAHDEIIPI 129 (174)
T ss_dssp TCCCCCC---SCEEEEEECCSCEEEEEEEEEECCSC-CCSSSSCEEE---EETTEEEEEEECHHHHHSS-SSCEEEEEEE
T ss_pred hhhccCC---CCeEEEEEeCCCeEEEEEEEEecccc-CCCCCeEeEE---EECCEEeecCcCHHHhhCC-CeeEEEEEEE
Confidence 5664433 2567767 566789999999999984 4678999997 555521 133555443321 111111111
Q ss_pred cc------------ccceEEEEEEeecCCCccccceeeeeeee
Q 005750 79 NV------------TLNFVLSFSFVKTRDSTLGPLLNAIEISK 109 (679)
Q Consensus 79 ~~------------~~~~~~~~~l~~~~~s~l~p~~na~e~~~ 109 (679)
++ ...+.+.+.+.+. +.-.|+|||+||++
T Consensus 130 ~v~~~~l~i~~~~~~~~g~L~I~f~p~--~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 130 SIKKGKLSVQGEVSTFTGKLSVEFVKG--YYDNPKVCALFIMK 170 (174)
T ss_dssp EEETTEEEETTEEEECCSEEEEEEECS--SSCSSSEEEEEEES
T ss_pred EEecCceeeeeeecccCCeEEEEEecc--CCCCcEEEEEEEEe
Confidence 11 2456788888864 35679999999975
No 412
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.59 E-value=4.9e-06 Score=88.45 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=52.5
Q ss_pred CceEEEEcCCCcccccCCccc-cCCCCCCEEECCCCcCCCCCC-CC-----CCCCCCcEEEecCccCCC----CCCCCCC
Q 005750 161 PRITKIALSGKNLKGEIPPEL-KNMEALTELWLDGNFLTGPLP-DM-----SRLIDLRIVHLENNELTG----SLPSYMG 229 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~-~~l~~L~~L~L~~N~l~~~~p-~~-----~~l~~L~~L~l~~N~l~g----~~p~~~~ 229 (679)
.+|+.|+|++|.|+..-...+ ..|++|+.|+|++|.|+.... .+ ...++|+.|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 367777777777764333333 235667777777777765432 12 345667777777777753 2344445
Q ss_pred CCCccceecccccCCC
Q 005750 230 SLPNLQELHIENNSFV 245 (679)
Q Consensus 230 ~l~~L~~L~l~~N~l~ 245 (679)
.+++|++|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLG 196 (372)
T ss_dssp TCSSCCEEECTTSSCH
T ss_pred cCCCcCEEeCCCCCCC
Confidence 6677777777777775
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.44 E-value=1.1e-05 Score=76.67 Aligned_cols=85 Identities=22% Similarity=0.298 Sum_probs=67.4
Q ss_pred CceEEEEcCCC-ccccc----CCccccCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccCCCC----CCC
Q 005750 161 PRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGS----LPS 226 (679)
Q Consensus 161 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~----~p~ 226 (679)
+.|+.|+|++| .|... +...+...++|++|+|++|.|+.. +. .+...++|+.|+|++|+|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47999999999 88642 455677789999999999998753 22 255678899999999999843 566
Q ss_pred CCCCCCccceecc--cccCCC
Q 005750 227 YMGSLPNLQELHI--ENNSFV 245 (679)
Q Consensus 227 ~~~~l~~L~~L~l--~~N~l~ 245 (679)
.+...++|+.|+| ++|.|.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCC
T ss_pred HHHhCCCceEEEecCCCCCCC
Confidence 7778889999999 889987
No 414
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.37 E-value=1.1e-05 Score=90.88 Aligned_cols=107 Identities=15% Similarity=0.073 Sum_probs=75.4
Q ss_pred CCceEEEEcC----CCccccc-----CCccccCCCCCCEEECCCC--cCCCCCC-CC-CCCCCCcEEEecCccCCC-CCC
Q 005750 160 PPRITKIALS----GKNLKGE-----IPPELKNMEALTELWLDGN--FLTGPLP-DM-SRLIDLRIVHLENNELTG-SLP 225 (679)
Q Consensus 160 ~~~l~~L~L~----~n~l~g~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p-~~-~~l~~L~~L~l~~N~l~g-~~p 225 (679)
.++|+.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+ .+ ..+++|+.|+|++|++++ .++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 4689999996 7788763 4445777899999999753 3665543 33 347889999999998876 355
Q ss_pred CCCCCCCccceecccccCCCCCCCccc---cCCceeeeecCCCC
Q 005750 226 SYMGSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNPK 266 (679)
Q Consensus 226 ~~~~~l~~L~~L~l~~N~l~g~ip~~~---~~~~~~~~~~~n~~ 266 (679)
..+..+++|+.|+|++|.|++.....+ ...+..+.+++|+.
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred HHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 556778889999999998874433322 23556777888873
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.30 E-value=1.2e-05 Score=76.37 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=68.6
Q ss_pred CceEEEEcCCCccccc----CCccccCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEe--cCccCCCC----CC
Q 005750 161 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHL--ENNELTGS----LP 225 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l--~~N~l~g~----~p 225 (679)
.+|+.|+|++|.|... +...+...++|+.|+|++|.|+.. +. .+...++|+.|+| ++|.|... +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 5899999999999743 445566778999999999999874 22 4788889999999 88999844 34
Q ss_pred CCCCCCCccceecccccCCC
Q 005750 226 SYMGSLPNLQELHIENNSFV 245 (679)
Q Consensus 226 ~~~~~l~~L~~L~l~~N~l~ 245 (679)
..+...++|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 45556689999999999886
No 416
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.28 E-value=0.00056 Score=71.08 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=73.9
Q ss_pred cccCcCccEE-EEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-C-CCcccccccccccceEEEEEEecCCCc
Q 005750 363 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-H-RNLVPLIGYCEEEHQRILVYEYMHNGT 439 (679)
Q Consensus 363 ~~LG~G~~g~-Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-pnIv~l~~~~~~~~~~~lV~E~~~~gs 439 (679)
+.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+. + -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566565554 6677654477788887543311 33456777777774 2 23455666543333 78999997766
Q ss_pred HhhhhcccC---------------------C--CCCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 005750 440 LRDRLHGSV---------------------N--QKPLDWLTRL-------Q-------------IAHDAAKGLEYLH--- 473 (679)
Q Consensus 440 L~~~l~~~~---------------------~--~~~l~~~~~~-------~-------------i~~qia~aL~~LH--- 473 (679)
+.+.+.... . ...++..... . ....+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654332110 0 0112111100 0 0001111222221
Q ss_pred hcCCCCccccCCCCCCccccCC----CcEEEeeccCccc
Q 005750 474 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 508 (679)
Q Consensus 474 ~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfgla~~ 508 (679)
......++|||+++.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123689999999999999874 6799999998764
No 417
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.27 E-value=0.00078 Score=69.52 Aligned_cols=142 Identities=15% Similarity=0.220 Sum_probs=80.3
Q ss_pred cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC--cccccccc------cccceEEEEEEe
Q 005750 363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYC------EEEHQRILVYEY 434 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~------~~~~~~~lV~E~ 434 (679)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+.... +.+++... ...+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999987755 6889988652 12245567888888774222 33444221 123567899999
Q ss_pred cCCCcHhh--------------hhcccC---CCC---CC---CHHHHHH------------HHHHHHHHHHHHHhc----
Q 005750 435 MHNGTLRD--------------RLHGSV---NQK---PL---DWLTRLQ------------IAHDAAKGLEYLHTG---- 475 (679)
Q Consensus 435 ~~~gsL~~--------------~l~~~~---~~~---~l---~~~~~~~------------i~~qia~aL~~LH~~---- 475 (679)
++|..+.. .++... ... .. .|..... +...+.+.++++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865321 111110 000 01 1221100 001234455555531
Q ss_pred CCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 476 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 476 ~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
...+++|+|+++.||+++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13579999999999999877666899999765
No 418
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.17 E-value=0.00083 Score=72.56 Aligned_cols=72 Identities=17% Similarity=0.324 Sum_probs=50.3
Q ss_pred cccCcCccEEEEEEEEcC--------CcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCc-ccccccccccceEEEEEE
Q 005750 363 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lV~E 433 (679)
+.|+.|....||++...+ ++.+++|+...... ...+.+|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888899999998753 57899999854211 1455679999998853333 566666543 38999
Q ss_pred ecCCCcH
Q 005750 434 YMHNGTL 440 (679)
Q Consensus 434 ~~~~gsL 440 (679)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 419
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.13 E-value=0.0011 Score=70.21 Aligned_cols=141 Identities=17% Similarity=0.186 Sum_probs=84.5
Q ss_pred cccCcCccEEEEEEEEc--------CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEE
Q 005750 363 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E 433 (679)
+.|..|....+|+.... +++.+++|+.... ........+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 46777888899998864 2578999986432 223456678999999884 3334566766654 28999
Q ss_pred ecCCCcHhhh-----------------hcccC--CCCCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 005750 434 YMHNGTLRDR-----------------LHGSV--NQKPL--DWLTRLQIAHDAAK-------------------GLEYLH 473 (679)
Q Consensus 434 ~~~~gsL~~~-----------------l~~~~--~~~~l--~~~~~~~i~~qia~-------------------aL~~LH 473 (679)
|++|.+|..- ++... -.+.. -+.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654311 11110 01122 24455555544422 223332
Q ss_pred h-----cCCCCccccCCCCCCccccCC----CcEEEeeccCccc
Q 005750 474 T-----GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 508 (679)
Q Consensus 474 ~-----~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfgla~~ 508 (679)
+ .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123578999999999999876 7899999997753
No 420
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.13 E-value=0.003 Score=65.25 Aligned_cols=141 Identities=13% Similarity=0.174 Sum_probs=82.0
Q ss_pred ccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCC--Cccccccc-----ccccceEEEEEEecC
Q 005750 364 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR--NLVPLIGY-----CEEEHQRILVYEYMH 436 (679)
Q Consensus 364 ~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~-----~~~~~~~~lV~E~~~ 436 (679)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+... .+++++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77889999887778889999986431 2345677788888888422 24444443 112445678999998
Q ss_pred CCcHhh--------------hhccc---C---CCCCCCHHHH----------------------HHHHHHHHHHHHHHHh
Q 005750 437 NGTLRD--------------RLHGS---V---NQKPLDWLTR----------------------LQIAHDAAKGLEYLHT 474 (679)
Q Consensus 437 ~gsL~~--------------~l~~~---~---~~~~l~~~~~----------------------~~i~~qia~aL~~LH~ 474 (679)
|..+.. .++.. . .....++... ...+.+++..+..+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 754320 01110 0 0112222211 1111122222222211
Q ss_pred -cCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 475 -GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 475 -~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
.....++|||+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1236789999999999998 4 899999987653
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.12 E-value=0.00065 Score=69.57 Aligned_cols=71 Identities=10% Similarity=0.095 Sum_probs=44.9
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCc-ccccccccccceEEEEEEec-CCCc
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGT 439 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lV~E~~-~~gs 439 (679)
.+.|+.|....+|+. +.+++|+....... .....+|..+++.+....+ .++++++.+ ..++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence 467888999999998 56889987643211 1123468888888743223 455554433 347899999 6544
Q ss_pred H
Q 005750 440 L 440 (679)
Q Consensus 440 L 440 (679)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.05 E-value=0.00073 Score=60.00 Aligned_cols=55 Identities=31% Similarity=0.408 Sum_probs=34.5
Q ss_pred EEEcCCCccc-ccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCC
Q 005750 165 KIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELT 221 (679)
Q Consensus 165 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~ 221 (679)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+.+.+. |..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777777776 35664332 3566777777777666663 566666666666666553
No 423
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.04 E-value=0.00019 Score=80.79 Aligned_cols=78 Identities=13% Similarity=0.111 Sum_probs=34.7
Q ss_pred ceEEEEcCCCccccc----CCccccCCCCCCEEECCCCcCCCCC----CC-CCCCCCCcEEEecCccCCCCCCCCCCCCC
Q 005750 162 RITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPL----PD-MSRLIDLRIVHLENNELTGSLPSYMGSLP 232 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 232 (679)
+|+.|+|++|.+++. ++..+.++++|+.|+|++|.+++.. +. +.++++|+.|+|++|.+.+ +|..+..++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455555555554433 2223344455555555555554221 11 3344555555555555442 333333444
Q ss_pred ccceeccc
Q 005750 233 NLQELHIE 240 (679)
Q Consensus 233 ~L~~L~l~ 240 (679)
+|+.|+++
T Consensus 244 ~L~~L~l~ 251 (592)
T 3ogk_B 244 NLEEFCGG 251 (592)
T ss_dssp TCCEEEEC
T ss_pred HHHhhccc
Confidence 44444443
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.00 E-value=6.6e-05 Score=70.21 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=64.7
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCc-CCCC-CCCCCCC----CCCcEEEecCcc-CCCCCCCCCCCCCc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGP-LPDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPN 233 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~-~p~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~ 233 (679)
.+|+.|||+++.++..--..+..|++|+.|+|+++. |+.. +..++.+ ++|+.|+|+++. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876555668899999999999985 6543 3345554 479999999985 77433345778999
Q ss_pred cceecccccC
Q 005750 234 LQELHIENNS 243 (679)
Q Consensus 234 L~~L~l~~N~ 243 (679)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 425
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.95 E-value=0.0026 Score=69.10 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=48.1
Q ss_pred cccCcCccEEEEEEEEcC-CcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCc-ccccccccccceEEEEEEecCCCcH
Q 005750 363 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGTL 440 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-v~l~~~~~~~~~~~lV~E~~~~gsL 440 (679)
+.|+.|....+|+....+ +..+++|+........ -.-.+|..+++.|...++ .++++++.. .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 568888899999998875 5789999875432111 112579999999864444 566766632 359999987554
No 426
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.95 E-value=4.2e-05 Score=86.21 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=76.9
Q ss_pred CCceEEEEcC--C----Ccccc-----cCCccccCCCCCCEEECCCCcCCCCCC-CCCC-CCCCcEEEecCccCCCCCCC
Q 005750 160 PPRITKIALS--G----KNLKG-----EIPPELKNMEALTELWLDGNFLTGPLP-DMSR-LIDLRIVHLENNELTGSLPS 226 (679)
Q Consensus 160 ~~~l~~L~L~--~----n~l~g-----~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~-l~~L~~L~l~~N~l~g~~p~ 226 (679)
.++|+.|+|+ + |++++ .++..+..+++|+.|+|++ .+++..+ .+.. +++|+.|+|++|.+++..+.
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 4789999999 4 56662 2233377889999999977 6665433 4555 89999999999999866555
Q ss_pred CC-CCCCccceecccccCCCCCCCcccc---CCceeeeecCCCC
Q 005750 227 YM-GSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 266 (679)
Q Consensus 227 ~~-~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~ 266 (679)
.+ ..+++|+.|+|++|.+++..+..+. ..+..+.+++|+.
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 54 6689999999999999644333232 3456677777764
No 427
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.94 E-value=0.0042 Score=59.51 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=69.1
Q ss_pred CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccccc
Q 005750 438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 517 (679)
Q Consensus 438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~ 517 (679)
-+|.++|... +.+++++++|.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.|.+.+ ..+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3788988864 67899999999999999998876220 1111233456888999999888764 1110
Q ss_pred ccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 005750 518 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 560 (679)
Q Consensus 518 ~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf 560 (679)
.....+.|||... ...+.+.=|||||+++|..+--..|-
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0133567888864 35578999999999999998765553
No 428
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.88 E-value=7.3e-05 Score=84.21 Aligned_cols=83 Identities=12% Similarity=0.174 Sum_probs=61.9
Q ss_pred CceEEEEcCCCcccccCCcccc-CCCCCCEEECCCC-cCCCC-CCC-CCCCCCCcEEEecCccCCCCCCCCC----CCCC
Q 005750 161 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGN-FLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYM----GSLP 232 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N-~l~~~-~p~-~~~l~~L~~L~l~~N~l~g~~p~~~----~~l~ 232 (679)
++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++. +.++++|+.|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788888888888877777776 6888888888888 55443 444 4478888888888888776544333 3667
Q ss_pred ccceecccccC
Q 005750 233 NLQELHIENNS 243 (679)
Q Consensus 233 ~L~~L~l~~N~ 243 (679)
+|+.|+|++|.
T Consensus 185 ~L~~L~l~~~~ 195 (594)
T 2p1m_B 185 SLVSLNISCLA 195 (594)
T ss_dssp CCCEEECTTCC
T ss_pred cCcEEEecccC
Confidence 88888888887
No 429
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.86 E-value=0.001 Score=69.04 Aligned_cols=77 Identities=19% Similarity=0.055 Sum_probs=65.8
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCC-EEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALT-ELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~-~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 238 (679)
.+|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++.+.+ .|.++++|+.|+|++|+++..-+..|.++++|+.|+
T Consensus 250 ~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 250 KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 58999999998 7744556799999999 999999 7887777 599999999999999999944445799999999886
Q ss_pred c
Q 005750 239 I 239 (679)
Q Consensus 239 l 239 (679)
.
T Consensus 328 ~ 328 (329)
T 3sb4_A 328 K 328 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 430
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.82 E-value=0.005 Score=64.19 Aligned_cols=68 Identities=13% Similarity=0.249 Sum_probs=45.3
Q ss_pred CcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc---CCCcccccccc------cccceEEEEEEecC
Q 005750 366 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYC------EEEHQRILVYEYMH 436 (679)
Q Consensus 366 G~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~------~~~~~~~lV~E~~~ 436 (679)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|.+++++... ...+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444689999988777 899998765432 35666676663 23255555432 23567899999999
Q ss_pred CCcH
Q 005750 437 NGTL 440 (679)
Q Consensus 437 ~gsL 440 (679)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.74 E-value=0.003 Score=66.64 Aligned_cols=73 Identities=14% Similarity=0.189 Sum_probs=45.0
Q ss_pred cccCcCccEEEEEEEEcC---------CcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC-cccccccccccceEEEEE
Q 005750 363 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVY 432 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~~~~~~~~~~~lV~ 432 (679)
+.|+.|....+|+....+ ++.+++|+...... .......|.++++.+...+ ..++++.+. .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567888888999998764 26899998754322 1112357888888885333 345665442 26899
Q ss_pred EecCCCcH
Q 005750 433 EYMHNGTL 440 (679)
Q Consensus 433 E~~~~gsL 440 (679)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.69 E-value=0.0022 Score=56.81 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=29.4
Q ss_pred EEECCCCcCC--CCCCCCCCCCCCcEEEecCccCCCCCCC-CCCCCCccceeccc
Q 005750 189 ELWLDGNFLT--GPLPDMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIE 240 (679)
Q Consensus 189 ~L~L~~N~l~--~~~p~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~ 240 (679)
.++.+++.|+ ..+..+. .+|+.|+|++|+|+ .||. .|..+++|+.|+|+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~ 63 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLG 63 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEec
Confidence 6778888887 4443432 34777777777777 4544 35556666554333
No 433
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.51 E-value=0.00028 Score=74.43 Aligned_cols=106 Identities=14% Similarity=0.233 Sum_probs=70.3
Q ss_pred CCceEEEEcCCCcccccCCcccc--CCCCCCEEECCC--CcCCCC--C----CCC--CCCCCCcEEEecCccCCCCCCCC
Q 005750 160 PPRITKIALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP--L----PDM--SRLIDLRIVHLENNELTGSLPSY 227 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~--~l~~L~~L~L~~--N~l~~~--~----p~~--~~l~~L~~L~l~~N~l~g~~p~~ 227 (679)
.++|+.|+|..+++....-..+. ++++|+.|+|+. |...+. + +.+ ..+++|+.|+|.+|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 36899999998888755444554 789999999863 332222 1 222 35789999999999987544333
Q ss_pred C---CCCCccceecccccCCCCC----CCccc--cCCceeeeecCCC
Q 005750 228 M---GSLPNLQELHIENNSFVGE----IPPAL--LTGKVIFKYDNNP 265 (679)
Q Consensus 228 ~---~~l~~L~~L~l~~N~l~g~----ip~~~--~~~~~~~~~~~n~ 265 (679)
+ ..+++|+.|+|+.|.+++. ++..+ +..+..+.+.+|.
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 2 3578999999999998853 23221 2234556666654
No 434
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.41 E-value=0.0099 Score=63.18 Aligned_cols=141 Identities=18% Similarity=0.203 Sum_probs=83.5
Q ss_pred cccCcCccEEEEEEEEcC--------CcEEEEEEecCCcch-----------h-------HHHHHHHHHHHHhcc-CCCc
Q 005750 363 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH-----------R-------TQQFVTEVALLSRIH-HRNL 415 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-hpnI 415 (679)
+.|..|-...+|+....+ ++.|.+++.-..... + .+.+..|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988754 378999987543211 0 122335888988885 4445
Q ss_pred ccccccccccceEEEEEEecCCCcHhh--h---------------hcccC--CCCCCC--HHHHHHHHHHHH--------
Q 005750 416 VPLIGYCEEEHQRILVYEYMHNGTLRD--R---------------LHGSV--NQKPLD--WLTRLQIAHDAA-------- 466 (679)
Q Consensus 416 v~l~~~~~~~~~~~lV~E~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~qia-------- 466 (679)
.++++++.+. +|+||++|-+|.. + ++... -..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6677776532 8999998755421 1 11110 111222 234444443321
Q ss_pred --------------HHHHH----HHh-cCCCCccccCCCCCCccccCC------CcEEEeeccCcc
Q 005750 467 --------------KGLEY----LHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSR 507 (679)
Q Consensus 467 --------------~aL~~----LH~-~~~~~ivH~Dlkp~NIll~~~------~~~kL~Dfgla~ 507 (679)
.-+.. |.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 222 123578999999999999876 789999998775
No 435
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.39 E-value=0.00025 Score=74.73 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=67.9
Q ss_pred CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CC--CCCCCCcEEEecC--ccCCCC-----CCCCC
Q 005750 159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DM--SRLIDLRIVHLEN--NELTGS-----LPSYM 228 (679)
Q Consensus 159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~--~~l~~L~~L~l~~--N~l~g~-----~p~~~ 228 (679)
..|+|+.|+|++|.-. .+++ +. +++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +...+
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred cCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3479999999887311 3444 43 8999999999888765322 23 3789999999964 332222 11122
Q ss_pred --CCCCccceecccccCCCCCCCccc-----cCCceeeeecCCCC
Q 005750 229 --GSLPNLQELHIENNSFVGEIPPAL-----LTGKVIFKYDNNPK 266 (679)
Q Consensus 229 --~~l~~L~~L~l~~N~l~g~ip~~~-----~~~~~~~~~~~n~~ 266 (679)
..+++|+.|+|.+|.+....+..+ ...+..+.++.|..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 358999999999999874333222 23456667766653
No 436
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.33 E-value=0.0054 Score=65.50 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=68.5
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCC-----CCCC-CCCCCCCCcEEEecCccCCCCCC-CCCCCCCc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-----GPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPN 233 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~-----~~~p-~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~ 233 (679)
..|+.|.| .++++..-+..|.+|++|+.|+|.+|.+. .+.+ .|.++++|+.++|. |+++ .|+ ..|.+|++
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRK 324 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCS
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCC
Confidence 36778888 45566444567888888888888888776 2233 48888888888888 4476 554 45778888
Q ss_pred cceecccccCCCCCCCccccC--CceeeeecCCC
Q 005750 234 LQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 265 (679)
Q Consensus 234 L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~ 265 (679)
|+.|.|.+| ++ .|+...|. .+..+.+.+|.
T Consensus 325 L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 325 VTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp CCEEEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred ccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 888888554 65 66666554 33455566653
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.96 E-value=0.008 Score=64.19 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=53.5
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCC----CCC-CCCCCCCCcc
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELT----GSL-PSYMGSLPNL 234 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~----g~~-p~~~~~l~~L 234 (679)
.+|+.|+|.+| ++..-...|.+ .+|+.+.| .|.++.+.+ .|.++++|+.++|.+|.+. ..| +..|.+|++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 35677777653 44222334544 67777777 444555544 4777777777777776654 113 3456777777
Q ss_pred ceecccccCCCCCCCccccC
Q 005750 235 QELHIENNSFVGEIPPALLT 254 (679)
Q Consensus 235 ~~L~l~~N~l~g~ip~~~~~ 254 (679)
+.+.|. |.++ .|+...|.
T Consensus 303 ~~l~l~-~~i~-~I~~~aF~ 320 (401)
T 4fdw_A 303 ARFEIP-ESIR-ILGQGLLG 320 (401)
T ss_dssp CEECCC-TTCC-EECTTTTT
T ss_pred CeEEeC-CceE-EEhhhhhc
Confidence 777777 4465 66666554
No 438
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.86 E-value=0.079 Score=56.71 Aligned_cols=140 Identities=14% Similarity=0.190 Sum_probs=84.6
Q ss_pred cccCcCccEEEEEEEEcC--------CcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEE
Q 005750 363 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 433 (679)
Q Consensus 363 ~~LG~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E 433 (679)
+.+..|-...+|+....+ ++.+++|+...... ..-+..+|.++++.+. +.-..++++.+. .++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778888999998763 58899998654321 1122357888888884 333445555432 278999
Q ss_pred ecCCCcHhh--h---------------hccc-------C---CCCCCCHHHHHHHHHHHH-------------------H
Q 005750 434 YMHNGTLRD--R---------------LHGS-------V---NQKPLDWLTRLQIAHDAA-------------------K 467 (679)
Q Consensus 434 ~~~~gsL~~--~---------------l~~~-------~---~~~~l~~~~~~~i~~qia-------------------~ 467 (679)
|++|..|.. + ++.. . ...+..+.++.++..++- .
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865421 0 0100 0 111112444444433321 2
Q ss_pred HHHHHHh---------------------cCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750 468 GLEYLHT---------------------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 508 (679)
Q Consensus 468 aL~~LH~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~ 508 (679)
.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233321 11356899999999999 8888999999998754
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.77 E-value=0.0066 Score=57.68 Aligned_cols=84 Identities=14% Similarity=0.180 Sum_probs=60.7
Q ss_pred CceEEEEcCCC-cccc----cCCccccCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccCCCC----CCC
Q 005750 161 PRITKIALSGK-NLKG----EIPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGS----LPS 226 (679)
Q Consensus 161 ~~l~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l~g~----~p~ 226 (679)
+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|... +- .+..-+.|+.|+|++|+|... |-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 47899999986 6642 2445577778999999999999743 12 245567899999999999743 233
Q ss_pred CCCCCCccceecccccCC
Q 005750 227 YMGSLPNLQELHIENNSF 244 (679)
Q Consensus 227 ~~~~l~~L~~L~l~~N~l 244 (679)
.+..-+.|+.|+|++|..
T Consensus 121 aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HTTTTCCCSEEECCCCSS
T ss_pred HHhhCCceeEEECCCCcC
Confidence 455556799999987643
No 440
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.10 E-value=0.33 Score=51.48 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.2
Q ss_pred CccccCCCCCCccc------cCCCcEEEeeccCccc
Q 005750 479 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 508 (679)
Q Consensus 479 ~ivH~Dlkp~NIll------~~~~~~kL~Dfgla~~ 508 (679)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 45799999999999 4567799999998764
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.05 E-value=0.014 Score=54.28 Aligned_cols=70 Identities=10% Similarity=0.125 Sum_probs=50.6
Q ss_pred cCCccccCCCCCCEEECCCCcCCCC-CCCCCCCCCCcEEEecCcc-CCCCCCCCCCCC----CccceecccccC-CC
Q 005750 176 EIPPELKNMEALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENNS-FV 245 (679)
Q Consensus 176 ~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~ 245 (679)
.+|.....--+|+.|||+++.++.. +..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 3454433335799999999997764 4558899999999999995 664333335543 479999999975 65
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.55 E-value=0.16 Score=53.15 Aligned_cols=88 Identities=16% Similarity=0.117 Sum_probs=53.1
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCC-CCCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ 238 (679)
..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..... .|.++++|+.+.+.+|.++ .|+ ..|.+|.+|+.+.
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~ 316 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVT 316 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEE
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEE
Confidence 35667777654 44233445666777777777543 443333 3677777777777777776 444 3566777777777
Q ss_pred ccccCCCCCCCcccc
Q 005750 239 IENNSFVGEIPPALL 253 (679)
Q Consensus 239 l~~N~l~g~ip~~~~ 253 (679)
|..+ ++ .|+...|
T Consensus 317 lp~~-l~-~I~~~aF 329 (379)
T 4h09_A 317 LPTA-LK-TIQVYAF 329 (379)
T ss_dssp CCTT-CC-EECTTTT
T ss_pred cCcc-cc-EEHHHHh
Confidence 7543 54 5555544
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.14 E-value=0.14 Score=54.11 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=44.8
Q ss_pred cccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCC-CCCCCCCccceecccccCCCCCCCccccC
Q 005750 180 ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIENNSFVGEIPPALLT 254 (679)
Q Consensus 180 ~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 254 (679)
.+..+++|+.+.+.+| ++.+.. .|.++++|+.++|.++ ++ .|+ ..|.+|++|+.+.|..| ++ .|++..|.
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~ 363 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQ 363 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhh
Confidence 4666777777777654 444434 4777777777777644 55 443 45777777777777655 55 66665554
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=91.79 E-value=0.38 Score=50.69 Aligned_cols=87 Identities=13% Similarity=0.222 Sum_probs=46.1
Q ss_pred ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCC-CCCCCCCccceecc
Q 005750 162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 239 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l 239 (679)
.|+.+.+.++..+ .-...|.++++|+.+.+. +.++.+.. .|.++.+|+.++|..| ++ .|. ..|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEE
Confidence 3444444433222 223345566666666664 33444433 3666777777777644 44 343 34666777777766
Q ss_pred cccCCCCCCCccccC
Q 005750 240 ENNSFVGEIPPALLT 254 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~ 254 (679)
..+ ++ .|+...|.
T Consensus 342 p~s-v~-~I~~~aF~ 354 (394)
T 4gt6_A 342 PSS-VT-KIPESAFS 354 (394)
T ss_dssp CTT-CC-BCCGGGGT
T ss_pred Ccc-cC-EEhHhHhh
Confidence 533 55 56555443
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=90.60 E-value=0.33 Score=51.17 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=63.3
Q ss_pred CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCC-CCCCCCccceec
Q 005750 161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 238 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~ 238 (679)
..|+.+.+. ++++..-...|.++++|+.++|..| ++.+-. .|.++.+|+.+.|..+ ++ .|.. .|.+|++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 468888886 5566334456899999999999865 555545 5999999999999765 77 6654 689999999999
Q ss_pred ccccCCC
Q 005750 239 IENNSFV 245 (679)
Q Consensus 239 l~~N~l~ 245 (679)
+.+|...
T Consensus 364 ~~~~~~~ 370 (394)
T 4gt6_A 364 YSGSRSQ 370 (394)
T ss_dssp ESSCHHH
T ss_pred ECCceee
Confidence 9887643
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=90.32 E-value=0.41 Score=50.00 Aligned_cols=88 Identities=16% Similarity=0.269 Sum_probs=61.8
Q ss_pred ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCC-CCCCCCccceecc
Q 005750 162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 239 (679)
Q Consensus 162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l 239 (679)
.+..+.+..+ +...-...+.+++.|+.+.+..+ ++.+-. .|.++.+|+.+.+..+ +. .++. .|..|++|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 5666666544 44344556778888888888766 555444 4888888888888654 55 4544 5788888888888
Q ss_pred cccCCCCCCCccccC
Q 005750 240 ENNSFVGEIPPALLT 254 (679)
Q Consensus 240 ~~N~l~g~ip~~~~~ 254 (679)
.+|.++ .|++..|.
T Consensus 294 ~~~~i~-~I~~~aF~ 307 (379)
T 4h09_A 294 DNSAIE-TLEPRVFM 307 (379)
T ss_dssp CCTTCC-EECTTTTT
T ss_pred cccccc-eehhhhhc
Confidence 888887 77777664
No 447
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=89.82 E-value=0.023 Score=53.93 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=57.4
Q ss_pred CceEEEEcCCCcccccC----CccccCCCCCCEEECCCCcCCCC----CC-CCCCCCCCcEEEecCccC---CC----CC
Q 005750 161 PRITKIALSGKNLKGEI----PPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNEL---TG----SL 224 (679)
Q Consensus 161 ~~l~~L~L~~n~l~g~~----p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~l~~N~l---~g----~~ 224 (679)
..|+.|+|++|+|...- ...+..=+.|+.|+|++|.|+.. +- .+..-+.|+.|+|++|.. .. .|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 48999999999997433 33455668999999999999864 22 366667799999997643 21 12
Q ss_pred CCCCCCCCccceecccccCC
Q 005750 225 PSYMGSLPNLQELHIENNSF 244 (679)
Q Consensus 225 p~~~~~l~~L~~L~l~~N~l 244 (679)
-..+..-+.|+.|+++.|.+
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 23333445677777765543
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.86 E-value=0.29 Score=33.78 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=5.9
Q ss_pred eeechhhhhHHHHHH
Q 005750 280 ILGTSIGVLAILLVL 294 (679)
Q Consensus 280 i~~~~i~~~~~l~v~ 294 (679)
+.++++|++++++++
T Consensus 14 A~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 14 ATGMVGALLLLLVVA 28 (44)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred EeehhHHHHHHHHHH
Confidence 333333344433333
No 449
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.72 E-value=0.36 Score=50.91 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=62.7
Q ss_pred CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCC-CCCCCCCcccee
Q 005750 160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQEL 237 (679)
Q Consensus 160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L 237 (679)
..+|+.+.+.++ ++..-...|.++++|+.++|.++ ++.+-. .|.++++|+.++|..| ++ .|+ ..|.+|++|+.+
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKV 371 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEE
Confidence 357889998765 66344556999999999999755 666555 5999999999999877 77 555 469999999999
Q ss_pred ccccc
Q 005750 238 HIENN 242 (679)
Q Consensus 238 ~l~~N 242 (679)
+|..|
T Consensus 372 ~lp~~ 376 (394)
T 4fs7_A 372 ELPKR 376 (394)
T ss_dssp EEEGG
T ss_pred EECCC
Confidence 99765
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.53 E-value=0.28 Score=33.74 Aligned_cols=24 Identities=13% Similarity=0.483 Sum_probs=11.0
Q ss_pred eeeeechhhhhHHHHHHHhHhhhh
Q 005750 278 KLILGTSIGVLAILLVLFLCSLIV 301 (679)
Q Consensus 278 ~ii~~~~i~~~~~l~v~~~~~~~~ 301 (679)
..+.+.++|+++++++++.+++++
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~ 35 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILI 35 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhe
Confidence 345666666443333333333333
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=81.38 E-value=0.61 Score=32.13 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=5.9
Q ss_pred eeechhh-hhHHHHHH
Q 005750 280 ILGTSIG-VLAILLVL 294 (679)
Q Consensus 280 i~~~~i~-~~~~l~v~ 294 (679)
|.+.+++ ++++++++
T Consensus 12 IA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHHH
Confidence 3333444 44433333
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.37 E-value=3.3 Score=39.41 Aligned_cols=115 Identities=12% Similarity=0.136 Sum_probs=79.1
Q ss_pred cCCCcccccccccccceEEEEEEecCCC-cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCC
Q 005750 411 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 489 (679)
Q Consensus 411 ~hpnIv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~N 489 (679)
.||++++. .+-.+++...+.++.-+.+ ++.. + ...+...+++++.+|+....+++. -+|--|+|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 57888866 4555566656656554322 3332 2 347788899999999988866653 4788899999
Q ss_pred ccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005750 490 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 561 (679)
Q Consensus 490 Ill~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~ 561 (679)
++++.++.+++.-.|+... ++|. ..+...=.-.+=|++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999986664322 2222 22334445567889999999999886
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.20 E-value=7.1 Score=37.24 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=77.6
Q ss_pred cCCCcccccccccccceEEEEEEecCCC-cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCccccCCCCC
Q 005750 411 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSS 488 (679)
Q Consensus 411 ~hpnIv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~-~LH~~~~~~ivH~Dlkp~ 488 (679)
.||++ -..+-.+++...+.++.-+++ ++. .++ ..+...+++++.+|+.... +++ .-+|--|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 57877 334446667677777765443 333 332 3678889999999888766 554 4577889999
Q ss_pred CccccCCCcEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 005750 489 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 561 (679)
Q Consensus 489 NIll~~~~~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~ 561 (679)
|+++|.++.+++.-.|+-. -++|.- .++.-=.-.+=|++..++.++..|.
T Consensus 114 NL~f~~~~~p~i~hRGi~~------------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE------------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETT------------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcc------------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998666432 233332 2333334567788999999988885
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.98 E-value=0.37 Score=52.14 Aligned_cols=59 Identities=8% Similarity=0.102 Sum_probs=17.2
Q ss_pred hccccCcCccEEEEEEEEcC-CcEEEE------EEecCCc--chhHHHHHHHHHHHHhccCCCcccccccc
Q 005750 361 FCKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYC 422 (679)
Q Consensus 361 ~~~~LG~G~~g~Vy~a~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 422 (679)
+.+.|| ||.||+|.+.. ..+||+ |..+... ......+.+|..+++.++|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 356777 99999998874 467888 6655422 22335678899999999999999998764
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=59.87 E-value=3.1 Score=27.68 Aligned_cols=24 Identities=17% Similarity=0.098 Sum_probs=12.2
Q ss_pred eeeeechhhhhHHHHHHHhHhhhh
Q 005750 278 KLILGTSIGVLAILLVLFLCSLIV 301 (679)
Q Consensus 278 ~ii~~~~i~~~~~l~v~~~~~~~~ 301 (679)
..|.++++++++.++++..+.+++
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHHHHHHHHHHHH
Confidence 345666666655544444433333
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=46.61 E-value=1.8e+02 Score=32.02 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=50.4
Q ss_pred ccccccccccceEEEEEEecCCCcHhhhhc----------ccCCCC----CCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 005750 416 VPLIGYCEEEHQRILVYEYMHNGTLRDRLH----------GSVNQK----PLDWLTRLQIAHDAAK--GLEYLHTGCNPG 479 (679)
Q Consensus 416 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~----------~~~~~~----~l~~~~~~~i~~qia~--aL~~LH~~~~~~ 479 (679)
++.|.+........ +.|++++.++.+.+. ...... ...+..+..++..+|- .+.|+=.
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 44455555444444 357777655555443 221111 1224455556555543 4556543
Q ss_pred ccccCCCCCCccccCCCcEEEeeccCcc
Q 005750 480 IIHRDVKSSNILLDINMRAKVSDFGLSR 507 (679)
Q Consensus 480 ivH~Dlkp~NIll~~~~~~kL~Dfgla~ 507 (679)
-||=+++|||++.+|++.=+|||.+.
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25888999999999999999999875
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=38.96 E-value=1.8e+02 Score=29.36 Aligned_cols=137 Identities=14% Similarity=0.142 Sum_probs=68.9
Q ss_pred ccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCccccccc--------------------
Q 005750 362 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGY-------------------- 421 (679)
Q Consensus 362 ~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~-------------------- 421 (679)
.+..-.|.. .||.+.. ++..|+||-.. ....+.+-.++...-.+.-|+..-+.-.
T Consensus 74 I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 455566654 4555544 47889999442 2233334444444444455542111100
Q ss_pred --ccccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHH--HHHHHHHhcCCC-Cccc-cCCCCCCccccCC
Q 005750 422 --CEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA--KGLEYLHTGCNP-GIIH-RDVKSSNILLDIN 495 (679)
Q Consensus 422 --~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia--~aL~~LH~~~~~-~ivH-~Dlkp~NIll~~~ 495 (679)
........++|+|.+|..|...-... ....+.. +.+.++. -++..+....++ ..++ .--.+.|||++.+
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTS-APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHhhcccceehhhhcCCCccccchhhh-hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 01123567999999976665432210 0011222 2233332 244455542222 2222 2357899999765
Q ss_pred Cc-EEEeeccCccc
Q 005750 496 MR-AKVSDFGLSRQ 508 (679)
Q Consensus 496 ~~-~kL~Dfgla~~ 508 (679)
+. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 44 88999988865
No 458
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=32.30 E-value=29 Score=23.76 Aligned_cols=28 Identities=29% Similarity=0.303 Sum_probs=13.0
Q ss_pred chhhhhHHHHHHHhHhhhhhhhhhcccc
Q 005750 283 TSIGVLAILLVLFLCSLIVLRKLRRKIS 310 (679)
Q Consensus 283 ~~i~~~~~l~v~~~~~~~~~~r~~~~~~ 310 (679)
++.+++.+++++++.+.+....+||+.+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 3444444333333334555555555543
No 459
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=26.48 E-value=46 Score=22.79 Aligned_cols=16 Identities=25% Similarity=0.576 Sum_probs=7.2
Q ss_pred echhhhhHHHHHHHhH
Q 005750 282 GTSIGVLAILLVLFLC 297 (679)
Q Consensus 282 ~~~i~~~~~l~v~~~~ 297 (679)
+++.+++..++++.++
T Consensus 12 ~IA~gVVgGv~~~~ii 27 (44)
T 2ks1_B 12 SIATGMVGALLLLLVV 27 (44)
T ss_dssp SSTHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHH
Confidence 4555555434433333
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.77 E-value=1.3e+02 Score=24.39 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=21.8
Q ss_pred CCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750 204 MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 241 (679)
Q Consensus 204 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 241 (679)
|.++++|+.+.|..+ ++-.-...|.+|.+|+.+.+..
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 666666666666554 3312234566777777776654
Done!