Query         005750
Match_columns 679
No_of_seqs    710 out of 4464
Neff          8.6 
Searched_HMMs 13730
Date          Mon Mar 25 06:26:56 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005750.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005750hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 2.6E-50 1.9E-54  410.2  18.5  254  359-634     7-261 (263)
  2 d1opja_ d.144.1.7 (A:) Abelson 100.0 6.5E-50 4.8E-54  412.1  16.4  260  355-634    15-275 (287)
  3 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 5.5E-50   4E-54  409.8  15.0  258  356-634    12-269 (272)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 4.6E-49 3.3E-53  406.2  21.1  248  358-627    21-269 (293)
  5 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 4.8E-49 3.5E-53  408.1  21.3  256  359-635    28-293 (299)
  6 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 2.7E-49   2E-53  405.0  17.9  259  357-634     8-272 (276)
  7 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 5.4E-49   4E-53  398.7  20.0  252  359-632     6-258 (258)
  8 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 3.7E-49 2.7E-53  402.5  18.7  250  358-627     6-259 (271)
  9 d2j4za1 d.144.1.7 (A:126-388)  100.0 3.2E-49 2.4E-53  401.3  18.0  244  358-627     7-254 (263)
 10 d2java1 d.144.1.7 (A:3-271) Se 100.0 5.6E-49 4.1E-53  401.1  14.8  253  358-627     5-265 (269)
 11 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.2E-48 8.9E-53  402.4  17.0  250  358-627    13-268 (288)
 12 d1t4ha_ d.144.1.7 (A:) Protein 100.0 6.6E-48 4.8E-52  393.2  19.9  244  360-627    12-265 (270)
 13 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 5.4E-48 3.9E-52  397.0  18.9  254  360-635    11-272 (285)
 14 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 5.1E-48 3.7E-52  395.8  18.3  248  363-633    13-268 (277)
 15 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 6.2E-48 4.5E-52  396.9  18.6  258  358-635     8-273 (283)
 16 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 1.5E-48 1.1E-52  409.0  13.9  269  356-632     5-304 (322)
 17 d1fmka3 d.144.1.7 (A:249-533)  100.0 4.5E-48 3.3E-52  397.3  15.1  257  357-634    17-273 (285)
 18 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 2.7E-48   2E-52  399.6  13.4  247  358-627     9-260 (288)
 19 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 1.7E-47 1.2E-51  397.5  17.5  250  357-627     9-263 (307)
 20 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 1.3E-47 9.3E-52  402.4  16.5  258  356-631    36-323 (325)
 21 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 1.4E-47   1E-51  392.2  16.3  259  357-637     7-271 (273)
 22 d1koba_ d.144.1.7 (A:) Twitchi 100.0 5.5E-47   4E-51  400.8  20.4  250  358-627    30-282 (352)
 23 d1koaa2 d.144.1.7 (A:5915-6264 100.0 4.3E-47 3.1E-51  401.3  19.2  251  358-628    27-280 (350)
 24 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 8.1E-47 5.9E-51  392.5  20.1  246  356-627    14-266 (309)
 25 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.8E-47 1.3E-51  388.2  12.3  251  358-635     8-260 (262)
 26 d1jksa_ d.144.1.7 (A:) Death-a 100.0 8.8E-47 6.4E-51  390.3  17.1  250  357-627    10-270 (293)
 27 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 3.6E-46 2.6E-50  391.9  20.0  245  359-627     7-260 (337)
 28 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 1.5E-46 1.1E-50  390.1  15.5  257  358-633    14-300 (301)
 29 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 8.5E-46 6.2E-50  386.2  18.5  243  359-628     6-257 (316)
 30 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 7.7E-46 5.6E-50  380.2  17.8  257  358-633     8-275 (277)
 31 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 8.8E-46 6.4E-50  387.0  18.4  255  358-634    10-272 (317)
 32 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 1.3E-45 9.6E-50  384.1  19.3  256  360-635    30-294 (311)
 33 d1ywna1 d.144.1.7 (A:818-1166) 100.0 5.7E-46 4.2E-50  385.5  16.5  262  356-635    12-297 (299)
 34 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 8.5E-46 6.2E-50  383.9  16.7  260  357-635    13-297 (299)
 35 d1u46a_ d.144.1.7 (A:) Activat 100.0 7.4E-46 5.4E-50  378.9  15.5  255  357-632     8-272 (273)
 36 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 2.6E-45 1.9E-49  382.4  17.8  264  354-635    20-308 (311)
 37 d1phka_ d.144.1.7 (A:) gamma-s 100.0 3.5E-45 2.5E-49  374.4  18.2  249  358-627     4-269 (277)
 38 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 1.3E-45 9.4E-50  384.4  14.9  258  357-635    10-286 (309)
 39 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 3.7E-45 2.7E-49  379.4  18.2  256  362-627     3-279 (299)
 40 d1tkia_ d.144.1.7 (A:) Titin,  100.0 8.4E-45 6.1E-49  379.7  19.8  249  358-627     6-257 (321)
 41 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 4.2E-45   3E-49  386.2  17.4  243  358-627    42-293 (350)
 42 d1xjda_ d.144.1.7 (A:) Protein 100.0 2.6E-45 1.9E-49  383.1  15.2  246  358-627     3-254 (320)
 43 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 9.2E-45 6.7E-49  381.5  19.2  250  358-627    12-271 (335)
 44 d1vjya_ d.144.1.7 (A:) Type I  100.0 7.8E-45 5.7E-49  377.1  18.0  269  359-637     5-300 (303)
 45 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.1E-44 7.9E-49  385.1  19.3  246  359-627     6-264 (364)
 46 d1p4oa_ d.144.1.7 (A:) Insulin 100.0   5E-45 3.6E-49  379.6  15.5  260  356-634    19-294 (308)
 47 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 3.2E-44 2.3E-48  369.9  16.8  260  358-627     3-280 (286)
 48 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 5.7E-44 4.2E-48  370.1  17.5  263  358-628     3-283 (298)
 49 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 1.7E-44 1.3E-48  369.0   8.9  238  358-627     5-254 (273)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 3.6E-43 2.6E-47  365.5  16.7  262  357-628     7-293 (305)
 51 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 2.6E-42 1.9E-46  361.1  18.8  262  357-627    10-304 (318)
 52 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 1.8E-42 1.3E-46  367.0  17.3  265  358-633    21-310 (350)
 53 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.9E-41 1.4E-45  358.4  22.5  261  358-628     9-295 (345)
 54 d1csna_ d.144.1.7 (A:) Casein  100.0 1.9E-41 1.4E-45  349.9  21.8  261  358-635     6-279 (293)
 55 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 5.2E-42 3.8E-46  363.0  17.1  264  358-634    19-309 (346)
 56 d1ckia_ d.144.1.7 (A:) Casein  100.0   4E-41 2.9E-45  348.9  21.0  260  358-635     8-279 (299)
 57 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 3.2E-41 2.3E-45  348.3  20.1  261  358-627     3-282 (292)
 58 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 7.6E-42 5.5E-46  357.3  14.5  250  359-627    26-291 (322)
 59 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 6.6E-41 4.8E-45  351.9  20.9  256  358-627    36-318 (328)
 60 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 6.8E-40   5E-44  347.7  21.6  260  358-628    18-311 (355)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 5.5E-40   4E-44  347.8  18.0  260  358-632    19-307 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 1.7E-36 1.2E-40  322.5  20.5  284  357-647    13-349 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9   1E-22 7.6E-27  195.1   5.7  162  361-550     4-189 (191)
 64 d1ogqa_ c.10.2.8 (A:) Polygala  99.7 1.1E-18 7.7E-23  180.1  10.0  151  117-267     3-162 (313)
 65 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.5 7.7E-15 5.6E-19  139.6  10.0  122  148-270     8-142 (192)
 66 d2ifga3 c.10.2.7 (A:36-191) Hi  99.4 7.2E-13 5.3E-17  121.2  10.0  103  166-270    13-119 (156)
 67 d1dcea3 c.10.2.2 (A:444-567) R  99.3 1.5E-12 1.1E-16  114.0   8.3   98  165-267     2-103 (124)
 68 d1p9ag_ c.10.2.7 (G:) von Will  99.3 4.6E-12 3.3E-16  126.5  12.2  111  159-270    98-211 (266)
 69 d1ogqa_ c.10.2.8 (A:) Polygala  99.3 3.4E-13 2.4E-17  138.2   3.7  109  162-270   198-307 (313)
 70 d1ozna_ c.10.2.7 (A:) Reticulo  99.2 6.2E-12 4.6E-16  126.7   8.3  111  160-270   128-241 (284)
 71 d1dcea3 c.10.2.2 (A:444-567) R  99.2 7.2E-12 5.2E-16  109.6   7.3   83  160-245    19-103 (124)
 72 d1a9na_ c.10.2.4 (A:) Spliceso  99.2 1.2E-11 8.6E-16  113.6   7.2  104  160-267    17-125 (162)
 73 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.2 1.4E-11   1E-15  116.5   7.8   90  160-249    53-143 (192)
 74 d1xkua_ c.10.2.7 (A:) Decorin   99.1 6.8E-11 4.9E-15  120.1  10.0  108  160-269   170-287 (305)
 75 d2ifga3 c.10.2.7 (A:36-191) Hi  99.0 2.2E-10 1.6E-14  104.2   7.6  102  143-245     3-116 (156)
 76 d1p9ag_ c.10.2.7 (G:) von Will  99.0 4.1E-10   3E-14  112.0   9.1  102  161-265    31-135 (266)
 77 d1a9na_ c.10.2.4 (A:) Spliceso  98.9 3.7E-10 2.7E-14  103.4   4.2   86  161-250    41-129 (162)
 78 d1xkua_ c.10.2.7 (A:) Decorin   98.8 4.1E-09   3E-13  106.6   9.9   97  165-265    14-111 (305)
 79 d1ozna_ c.10.2.7 (A:) Reticulo  98.8   7E-09 5.1E-13  103.8  10.4  108  160-267   104-214 (284)
 80 d2omxa2 c.10.2.1 (A:37-235) In  98.7 1.7E-08 1.2E-12   95.4   8.7  100  161-265    40-139 (199)
 81 d1m9la_ c.10.3.1 (A:) Outer ar  98.6 2.5E-10 1.8E-14  108.3  -6.2  103  160-267    47-153 (198)
 82 d2omza2 c.10.2.1 (A:33-416) In  98.6 1.1E-08 8.1E-13  106.3   5.7  100  160-264   284-383 (384)
 83 d1h6ta2 c.10.2.1 (A:31-240) In  98.6 5.3E-08 3.9E-12   92.6   8.4   82  162-249    47-128 (210)
 84 d1xwdc1 c.10.2.7 (C:18-259) Fo  98.5 4.7E-08 3.4E-12   94.9   7.3  102  148-250     8-120 (242)
 85 d1h6ta2 c.10.2.1 (A:31-240) In  98.5 5.9E-08 4.3E-12   92.3   7.8  101  160-265    67-167 (210)
 86 d1h6ua2 c.10.2.1 (A:36-262) In  98.5 4.1E-08   3E-12   94.6   6.0   79  162-245   130-208 (227)
 87 d2omza2 c.10.2.1 (A:33-416) In  98.5 5.3E-08 3.9E-12  101.0   7.2   98  161-265   263-362 (384)
 88 d2omxa2 c.10.2.1 (A:37-235) In  98.5 1.4E-07   1E-11   88.8   8.4   99  160-264    61-160 (199)
 89 d1h6ua2 c.10.2.1 (A:36-262) In  98.3 2.7E-07   2E-11   88.6   7.5   77  160-241   150-226 (227)
 90 d1m9la_ c.10.3.1 (A:) Outer ar  98.3 3.2E-09 2.3E-13  100.4  -7.2   83  161-246    70-154 (198)
 91 d1j7la_ d.144.1.6 (A:) Type II  98.3 4.6E-07 3.4E-11   88.7   8.3  137  363-508    20-213 (263)
 92 d1jl5a_ c.10.2.6 (A:) Leucine   98.1 4.5E-06 3.3E-10   84.6  10.2   77  162-250    39-115 (353)
 93 d1nd4a_ d.144.1.6 (A:) Aminogl  98.0 3.6E-06 2.6E-10   81.7   8.3  130  364-507    17-204 (255)
 94 d1jl5a_ c.10.2.6 (A:) Leucine   98.0 5.6E-06 4.1E-10   83.8   9.2   82  160-251    57-138 (353)
 95 d1koha1 c.10.2.3 (A:201-362) m  97.9 4.7E-07 3.4E-11   82.1  -1.5   73  176-249    56-132 (162)
 96 d1xwdc1 c.10.2.7 (C:18-259) Fo  97.9 1.5E-05 1.1E-09   76.4   8.8   95  161-257   128-225 (242)
 97 d1koha1 c.10.2.3 (A:201-362) m  97.6 1.2E-06 8.7E-11   79.3  -3.4   78  161-238    65-152 (162)
 98 d2pula1 d.144.1.6 (A:5-396) Me  97.5 8.7E-05 6.4E-09   76.8   8.9   76  362-439    31-117 (392)
 99 d1zyla1 d.144.1.6 (A:4-328) Rd  97.4 0.00023 1.7E-08   71.4   9.8  135  371-508    36-220 (325)
100 d1z7xw1 c.10.1.1 (W:1-460) Rib  97.2 2.2E-05 1.6E-09   82.2  -0.7   84  162-245    28-125 (460)
101 d1z7xw1 c.10.1.1 (W:1-460) Rib  96.8 3.2E-05 2.3E-09   80.9  -3.2  106  161-266     2-124 (460)
102 d2astb2 c.10.1.3 (B:2136-2419)  96.7 0.00025 1.8E-08   69.7   2.1   36  206-241   173-209 (284)
103 d2astb2 c.10.1.3 (B:2136-2419)  96.7 0.00033 2.4E-08   68.8   3.0   82  161-242   148-235 (284)
104 d1nw1a_ d.144.1.8 (A:) Choline  96.6  0.0028   2E-07   65.0  10.1   72  363-440    48-128 (395)
105 d2ca6a1 c.10.1.2 (A:2-345) Rna  96.6  0.0001 7.3E-09   74.7  -1.5   85  161-245   158-256 (344)
106 d2ca6a1 c.10.1.2 (A:2-345) Rna  96.6 0.00014   1E-08   73.6  -0.7   85  161-245   186-286 (344)
107 d1pgva_ c.10.1.1 (A:) Tropomod  96.5 0.00022 1.6E-08   64.2   0.1   85  161-245    15-113 (167)
108 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.1  0.0092 6.7E-07   58.7  10.3  141  364-507    25-212 (316)
109 d1pgva_ c.10.1.1 (A:) Tropomod  95.1  0.0011 8.3E-08   59.2  -1.1   83  161-243    44-142 (167)
110 d1io0a_ c.10.1.1 (A:) Tropomod  92.1  0.0076 5.5E-07   53.4  -1.5   85  161-245    17-117 (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  90.0  0.0081 5.9E-07   53.2  -3.7   84  161-244    46-144 (166)
112 d1cjaa_ d.144.1.3 (A:) Actin-f  40.4      51  0.0037   30.7   9.0  132  365-506    76-235 (342)
113 d1kq8a_ a.4.5.14 (A:) HFH-1 (H  20.0      38  0.0028   24.3   3.2   30  606-635     3-32  (75)

No 1  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-50  Score=410.19  Aligned_cols=254  Identities=28%  Similarity=0.458  Sum_probs=200.3

Q ss_pred             HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCC
Q 005750          359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG  438 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g  438 (679)
                      +++.+.||+|+||+||+|++++++.||||+++... ...+++.+|++++++++||||++++|+|..++..++||||+++|
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            56788999999999999999989999999997643 34578999999999999999999999999999999999999999


Q ss_pred             cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccccc
Q 005750          439 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISS  518 (679)
Q Consensus       439 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~  518 (679)
                      +|.+++...  ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...........
T Consensus        86 ~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          86 CLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             BHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             cHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            999998753  4678999999999999999999999   99999999999999999999999999999877655444444


Q ss_pred             cccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhC-CCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCC
Q 005750          519 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISG-KKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK  597 (679)
Q Consensus       519 ~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  597 (679)
                      ...||+.|+|||++.+..++.++|||||||++|||+|+ ++||....   ...+.+.+    ..+...  ..       +
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~---~~~~~~~i----~~~~~~--~~-------p  224 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS---NSEVVEDI----STGFRL--YK-------P  224 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC---HHHHHHHH----HHTCCC--CC-------C
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC---HHHHHHHH----HhcCCC--CC-------c
Confidence            45689999999999999999999999999999999995 55554211   11222222    222111  11       1


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          598 IESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       598 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                      ......+.+++.+||+.||++||||+||++.|+++.+
T Consensus       225 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            1223478899999999999999999999999998865


No 2  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=6.5e-50  Score=412.14  Aligned_cols=260  Identities=28%  Similarity=0.404  Sum_probs=215.5

Q ss_pred             HHHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          355 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       355 ~~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      ....+++.++||+|+||+||+|+++ +++.||||+++... ...+++.+|+++|++++|||||+++++|.+++..++|||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   93 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence            3445778899999999999999987 58899999987543 345789999999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+++|+|.+++... ....+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+|+......
T Consensus        94 ~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          94 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             cccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            99999999998754 35679999999999999999999999   999999999999999999999999999999876654


Q ss_pred             ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750          514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI  593 (679)
Q Consensus       514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  593 (679)
                      ........|++.|+|||++.+..++.++|||||||++|||++|..||.....  ...+.+    .+..+..         
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~--~~~~~~----~i~~~~~---------  234 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYE----LLEKDYR---------  234 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHH----HHHTTCC---------
T ss_pred             ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch--HHHHHH----HHhcCCC---------
Confidence            4444445588999999999999999999999999999999997777652221  112222    2222211         


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                      ...+...+..+.+|+.+||+.||++|||++||++.|+.+.+
T Consensus       235 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            11122234578999999999999999999999999988754


No 3  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-50  Score=409.76  Aligned_cols=258  Identities=25%  Similarity=0.413  Sum_probs=210.9

Q ss_pred             HHHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM  435 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~  435 (679)
                      ...|++.+.||+|+||.||+|.+++++.||||+++... ...+.+.+|++++++++|||||++++++.+ +..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            34577889999999999999999988999999997543 345779999999999999999999998865 4579999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH  515 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~  515 (679)
                      ++|+|.+++... ....+++..++.|+.||++||+|||+   ++|+||||||+|||+++++.+||+|||+|+........
T Consensus        90 ~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~  165 (272)
T d1qpca_          90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (272)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCccc
Confidence            999999987643 23468999999999999999999999   99999999999999999999999999999987655444


Q ss_pred             ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750          516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN  595 (679)
Q Consensus       516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  595 (679)
                      ......||+.|+|||++.+..++.++|||||||++|||+||..|+.....  .....+.    +..+...         .
T Consensus       166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~--~~~~~~~----i~~~~~~---------~  230 (272)
T d1qpca_         166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVIQN----LERGYRM---------V  230 (272)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHH----HHTTCCC---------C
T ss_pred             cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC--HHHHHHH----HHhcCCC---------C
Confidence            44455689999999999988999999999999999999996665542221  1122222    2222111         1


Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                      .+...+..+.+++.+||+.||++||||+||++.|++...
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            111233468899999999999999999999999998754


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-49  Score=406.21  Aligned_cols=248  Identities=24%  Similarity=0.366  Sum_probs=207.1

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      .|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            4677899999999999999875 699999999976555556789999999999999999999999999999999999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI  516 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~  516 (679)
                      ||+|.+++..    ..+++.+++.++.||+.||+|||+   +||+||||||+|||++.++++||+|||+|+........ 
T Consensus       101 gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~-  172 (293)
T d1yhwa1         101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-  172 (293)
T ss_dssp             TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred             CCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccccc-
Confidence            9999998763    469999999999999999999999   99999999999999999999999999999876543322 


Q ss_pred             cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750          517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV  596 (679)
Q Consensus       517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  596 (679)
                      .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+..      +........+... .       ..
T Consensus       173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~~~~~~~~~-~-------~~  238 (293)
T d1yhwa1         173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTPE-L-------QN  238 (293)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSCC-C-------SS
T ss_pred             ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH------HHHHHHHhCCCCC-C-------CC
Confidence            33456999999999999999999999999999999999999999743321      1111222222111 0       11


Q ss_pred             CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      +......+.+++.+||+.||.+|||++|+++
T Consensus       239 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1223357889999999999999999999975


No 5  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4.8e-49  Score=408.06  Aligned_cols=256  Identities=26%  Similarity=0.454  Sum_probs=199.6

Q ss_pred             HhhccccCcCccEEEEEEEEcC-C---cEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          359 NNFCKKIGKGSFGSVYYGKMKD-G---KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      +++.+.||+|+||+||+|+++. +   ..||||.+.... ....+.|.+|+++|++++|||||+++|++.+++..++|||
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            4445789999999999998762 3   368999887543 3455789999999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+++|+|.+++..  ....+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       108 y~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         108 FMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             CCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             ecCCCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence            9999999998874  34579999999999999999999999   999999999999999999999999999998765432


Q ss_pred             ccc----cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750          514 THI----SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV  588 (679)
Q Consensus       514 ~~~----~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (679)
                      ...    .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.....   ..+...+    ..+..    
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~---~~~~~~i----~~~~~----  251 (299)
T d1jpaa_         183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN---QDVINAI----EQDYR----  251 (299)
T ss_dssp             -------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHH----HTTCC----
T ss_pred             CcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH---HHHHHHH----HcCCC----
Confidence            211    112347899999999999999999999999999999998 8999974322   1222222    22211    


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                           ...+...+..+.+|+.+||+.||.+|||++||++.|+++++.
T Consensus       252 -----~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         252 -----LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence                 111223345788999999999999999999999999998764


No 6  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-49  Score=405.00  Aligned_cols=259  Identities=29%  Similarity=0.516  Sum_probs=203.3

Q ss_pred             HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      ..|.+.+.||+|+||+||+|+++  ..||||+++..  .....+.|.+|++++++++|||||++++++.+ +..++||||
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey   84 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQW   84 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEec
Confidence            34567899999999999999875  36999998653  34456789999999999999999999998865 457999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      +++|+|.+++...  ...+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus        85 ~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          85 CEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             CCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred             CCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccCC
Confidence            9999999999743  4569999999999999999999999   9999999999999999999999999999987654322


Q ss_pred             -cccccccCCccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750          515 -HISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP  590 (679)
Q Consensus       515 -~~~~~~~gt~~y~aPE~l~~---~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  590 (679)
                       .......||+.|+|||++.+   ..++.++|||||||++|||+||+.||.......  .+..    .+..+.....+  
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~--~~~~----~~~~~~~~p~~--  231 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIF----MVGRGYLSPDL--  231 (276)
T ss_dssp             ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHH----HHHHTSCCCCG--
T ss_pred             cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH--HHHH----HHhcCCCCCcc--
Confidence             22344568999999999864   357999999999999999999999997432211  1111    12222111111  


Q ss_pred             cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                         .......+..+.+++.+||+.||.+|||++||++.|+.+..
T Consensus       232 ---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         232 ---SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             ---GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               11122334578899999999999999999999999998765


No 7  
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-49  Score=398.71  Aligned_cols=252  Identities=28%  Similarity=0.466  Sum_probs=211.5

Q ss_pred             HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCCC
Q 005750          359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG  438 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g  438 (679)
                      +++.++||+|+||+||+|++++++.||||+++... ...+++.+|++++++++||||++++|+|.+++..++||||+++|
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            45789999999999999999989999999998653 34578999999999999999999999999999999999999999


Q ss_pred             cHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccccc
Q 005750          439 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISS  518 (679)
Q Consensus       439 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~~~  518 (679)
                      +|.+++...  ...+++..+++++.|+++||+|||+   +||+||||||+||++++++.+||+|||+++...........
T Consensus        85 ~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          85 CLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             EHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             cHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            999987643  4568899999999999999999999   99999999999999999999999999999876554444444


Q ss_pred             cccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCCC
Q 005750          519 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK  597 (679)
Q Consensus       519 ~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  597 (679)
                      ...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......   .+..    .+..+...         ..+
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~---~~~~----~i~~~~~~---------~~p  223 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAE----HIAQGLRL---------YRP  223 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHH----HHHTTCCC---------CCC
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH---HHHH----HHHhCCCC---------CCc
Confidence            4568999999999999999999999999999999998 89999744321   1221    22222111         111


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005750          598 IESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS  632 (679)
Q Consensus       598 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  632 (679)
                      ...+..+.+++.+||+.||++|||++||++.|.++
T Consensus       224 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            12235788999999999999999999999998764


No 8  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-49  Score=402.52  Aligned_cols=250  Identities=25%  Similarity=0.371  Sum_probs=202.0

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM  435 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~  435 (679)
                      .|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~   85 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   85 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEecc
Confidence            3677899999999999999986 69999999987543 233467899999999999999999999999999999999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc-c
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T  514 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~-~  514 (679)
                      ++|+|.+++.   ....+++..++.++.||++||+|||+   +||+||||||+|||+++++.+||+|||+|+...... .
T Consensus        86 ~gg~L~~~l~---~~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          86 SGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             TTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             CCCcHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence            9999999997   45689999999999999999999999   999999999999999999999999999998764432 2


Q ss_pred             cccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750          515 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI  593 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  593 (679)
                      .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... ......    .......        
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~-~~~~~~----~~~~~~~--------  226 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKTYL--------  226 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS-HHHHHH----HTTCTTS--------
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH-HHHHHH----hcCCCCC--------
Confidence            22345579999999999988776 678999999999999999999997433221 111111    1111100        


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                       .........+.+++.+||+.||++|||++|+++
T Consensus       227 -~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         227 -NPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             011122346789999999999999999999865


No 9  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-49  Score=401.34  Aligned_cols=244  Identities=26%  Similarity=0.423  Sum_probs=205.0

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      .|++.+.||+|+||+||+|+++ +++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            3678899999999999999986 68999999986432   2335678899999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+++|+|.+++..   ...+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+|.......
T Consensus        87 y~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~  160 (263)
T d2j4za1          87 YAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  160 (263)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred             ecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence            9999999999973   4579999999999999999999999   999999999999999999999999999998765432


Q ss_pred             ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750          514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI  593 (679)
Q Consensus       514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  593 (679)
                         .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..   ...+    .+..+..      .  
T Consensus       161 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~----~i~~~~~------~--  222 (263)
T d2j4za1         161 ---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---ETYK----RISRVEF------T--  222 (263)
T ss_dssp             ---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHTTCC------C--
T ss_pred             ---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCC------C--
Confidence               23456999999999999999999999999999999999999999743321   1111    1122211      1  


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          594 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       594 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                        .+......+.+++.+||+.||++|||++|+++
T Consensus       223 --~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         223 --FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence              11122346889999999999999999999986


No 10 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-49  Score=401.11  Aligned_cols=253  Identities=26%  Similarity=0.386  Sum_probs=193.8

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccc--cceEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILVY  432 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lV~  432 (679)
                      .|++.+.||+|+||+||+|+.+ +|+.||+|++....  ....+.+.+|++++++++||||+++++++.+  ++..++||
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEE
Confidence            3677899999999999999876 68999999987543  3445678999999999999999999998854  45689999


Q ss_pred             EecCCCcHhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          433 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGC--NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       433 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      ||+++|+|.+++.... ....+++..++.++.||+.||+|||+..  ..+|+||||||+|||++.++.+||+|||+|+..
T Consensus        85 Ey~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~  164 (269)
T d2java1          85 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL  164 (269)
T ss_dssp             ECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC
T ss_pred             ecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeec
Confidence            9999999999987533 4567999999999999999999999821  124999999999999999999999999999876


Q ss_pred             ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750          510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD  589 (679)
Q Consensus       510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  589 (679)
                      ...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+..   .+..    .+..+....   
T Consensus       165 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~---~~~~----~i~~~~~~~---  233 (269)
T d2java1         165 NHDTSF-AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---ELAG----KIREGKFRR---  233 (269)
T ss_dssp             ------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHTCCCC---
T ss_pred             ccCCCc-cccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH---HHHH----HHHcCCCCC---
Confidence            543322 23456899999999999999999999999999999999999999743221   1111    222232211   


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                        +    +.....++.+++.+||+.||.+|||++|+++
T Consensus       234 --~----~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         234 --I----PYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             --C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --C----CcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence              1    1122346889999999999999999999975


No 11 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-48  Score=402.43  Aligned_cols=250  Identities=22%  Similarity=0.353  Sum_probs=206.2

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      .|++.+.||+|+||+||+|++. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++||||++
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~   92 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   92 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence            3677899999999999999976 689999999987666677889999999999999999999999999999999999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI  516 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~  516 (679)
                      +|+|.+++...  ...+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|........ .
T Consensus        93 ~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~-~  166 (288)
T d2jfla1          93 GGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-R  166 (288)
T ss_dssp             TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH-H
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCcc-c
Confidence            99999987642  4579999999999999999999999   9999999999999999999999999999976543322 2


Q ss_pred             cccccCCccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750          517 SSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV  591 (679)
Q Consensus       517 ~~~~~gt~~y~aPE~l~-----~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  591 (679)
                      .....||+.|+|||++.     +..++.++|||||||++|||++|+.||.......   ...   .... +.....    
T Consensus       167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~---~~~---~i~~-~~~~~~----  235 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR---VLL---KIAK-SEPPTL----  235 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHH---HHHH-SCCCCC----
T ss_pred             ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH---HHH---HHHc-CCCCCC----
Confidence            23456999999999983     4568999999999999999999999997443221   111   1111 111111    


Q ss_pred             ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                         ..+......+.+++.+||+.||.+|||++|+++
T Consensus       236 ---~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         236 ---AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             ---SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---CccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               111223457889999999999999999999976


No 12 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.6e-48  Score=393.20  Aligned_cols=244  Identities=29%  Similarity=0.440  Sum_probs=196.8

Q ss_pred             hhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccc----cceEEEEE
Q 005750          360 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY  432 (679)
Q Consensus       360 ~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~----~~~~~lV~  432 (679)
                      +|.++||+|+||+||+|++. +++.||+|++...  .....+.+.+|+++|++++|||||++++++.+    +...++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            46678999999999999886 6889999998653  23455679999999999999999999999854    45689999


Q ss_pred             EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--ccccCCCCCCcccc-CCCcEEEeeccCcccc
Q 005750          433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQA  509 (679)
Q Consensus       433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kL~Dfgla~~~  509 (679)
                      ||+++|+|.+++..   ...+++..++.++.||++||+|||+   ++  |+||||||+|||++ +++.+||+|||+|+..
T Consensus        92 E~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_          92 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  165 (270)
T ss_dssp             ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             eCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence            99999999999974   4679999999999999999999998   77  99999999999996 5789999999999864


Q ss_pred             ccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750          510 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD  589 (679)
Q Consensus       510 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  589 (679)
                      ....   .....||+.|+|||++.+ .++.++|||||||++|||++|+.||.....  ...+.    ..+..+.....++
T Consensus       166 ~~~~---~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~--~~~~~----~~i~~~~~~~~~~  235 (270)
T d1t4ha_         166 RASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIY----RRVTSGVKPASFD  235 (270)
T ss_dssp             CTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHH----HHHTTTCCCGGGG
T ss_pred             cCCc---cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc--HHHHH----HHHHcCCCCcccC
Confidence            4332   234569999999999876 589999999999999999999999973322  11111    1222222111111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .    .    ...++.+++.+||++||++|||++|+++
T Consensus       236 ~----~----~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         236 K----V----AIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             G----C----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c----c----CCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            1    1    1235889999999999999999999976


No 13 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-48  Score=396.99  Aligned_cols=254  Identities=25%  Similarity=0.429  Sum_probs=207.2

Q ss_pred             hhcc-ccCcCccEEEEEEEEc---CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          360 NFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       360 ~~~~-~LG~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      .+.+ +||+|+||+||+|.++   ++..||||+++... ....+.|.+|+++|++++|||||+++|++.+ +..++||||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~   89 (285)
T d1u59a_          11 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEM   89 (285)
T ss_dssp             EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEEC
T ss_pred             EECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEe
Confidence            3445 4999999999999765   35689999997653 3456789999999999999999999999875 457999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      +++|+|.+++..  ....+++..+..++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus        90 ~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  164 (285)
T d1u59a_          90 AGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  164 (285)
T ss_dssp             CTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             CCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccccc
Confidence            999999998864  24679999999999999999999999   9999999999999999999999999999987654332


Q ss_pred             c--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750          515 H--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV  591 (679)
Q Consensus       515 ~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  591 (679)
                      .  ......||+.|+|||++.+..++.++|||||||++|||+| |+.||......   .+..    .+..+....     
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~~~~----~i~~~~~~~-----  232 (285)
T d1u59a_         165 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRME-----  232 (285)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHH----HHHTTCCCC-----
T ss_pred             ccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCC-----
Confidence            2  2233458899999999998999999999999999999998 99999743321   2222    223332211     


Q ss_pred             ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                          .+...+..+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus       233 ----~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         233 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                1222345788999999999999999999999999987653


No 14 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-48  Score=395.84  Aligned_cols=248  Identities=27%  Similarity=0.468  Sum_probs=200.7

Q ss_pred             cccCcCccEEEEEEEEcC---CcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecCC
Q 005750          363 KKIGKGSFGSVYYGKMKD---GKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN  437 (679)
Q Consensus       363 ~~LG~G~~g~Vy~a~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~  437 (679)
                      ++||+|+||+||+|.+++   ++.||||+++...  ....+.+.+|+++|++++|||||+++++|..+ ..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            579999999999998653   5689999996532  33457899999999999999999999999654 57899999999


Q ss_pred             CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc--
Q 005750          438 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH--  515 (679)
Q Consensus       438 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~--  515 (679)
                      |+|.+++..   ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++........  
T Consensus        92 g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          92 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence            999999973   5679999999999999999999999   99999999999999999999999999999876543322  


Q ss_pred             ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          516 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       516 ~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                      ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....   .+..    .+..+...         
T Consensus       166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~---~~~~----~i~~~~~~---------  229 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERM---------  229 (277)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCC---------
T ss_pred             cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH---HHHH----HHHcCCCC---------
Confidence            2233468999999999999999999999999999999998 89999743221   2222    22222211         


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI  633 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  633 (679)
                      ..+...+..+.+|+.+||+.||++|||++||++.|+...
T Consensus       230 ~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            112223457889999999999999999999999888754


No 15 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-48  Score=396.88  Aligned_cols=258  Identities=29%  Similarity=0.448  Sum_probs=202.9

Q ss_pred             HHhhccccCcCccEEEEEEEEcCC-----cEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMKDG-----KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      .+++.+.||+|+||.||+|.+++.     ..||||++.... .....+|.+|++++++++|||||+++|++.+.+..++|
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            355678999999999999987642     479999987543 33456799999999999999999999999999999999


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      |||+.+|++.+.+..  ....+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  162 (283)
T d1mqba_          88 TEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  162 (283)
T ss_dssp             EECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEecccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcccC
Confidence            999999999998764  34679999999999999999999999   9999999999999999999999999999987654


Q ss_pred             Ccc--cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750          512 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD  589 (679)
Q Consensus       512 ~~~--~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  589 (679)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|..|+.....  ...+.+.    +..+..     
T Consensus       163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~--~~~~~~~----i~~~~~-----  231 (283)
T d1mqba_         163 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--NHEVMKA----INDGFR-----  231 (283)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHH----HHTTCC-----
T ss_pred             CCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC--HHHHHHH----HhccCC-----
Confidence            322  222334589999999999999999999999999999999997666642221  1122222    222211     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                          ...+...+..+.+|+.+||+.||++||||+||++.|+++.+.
T Consensus       232 ----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         232 ----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             ----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ----CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence                112223345789999999999999999999999999988764


No 16 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-48  Score=408.97  Aligned_cols=269  Identities=22%  Similarity=0.331  Sum_probs=206.5

Q ss_pred             HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      ...|++.++||+|+||+||+|++. +|+.||+|+++... ....+.+.+|+.+|++++|||||+++++|.++++.++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            345777899999999999999976 68999999987543 3445789999999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |++||+|.+++.+   ...+++..+..++.|++.||.|||+  .+||+||||||+|||++.++.+||+|||+|.......
T Consensus        85 y~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  159 (322)
T d1s9ja_          85 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  159 (322)
T ss_dssp             CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT
T ss_pred             cCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc
Confidence            9999999999974   4579999999999999999999997  1489999999999999999999999999998764322


Q ss_pred             ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHH-HHHHhHhc--------CC-
Q 005750          514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH-WARSMIKK--------GD-  583 (679)
Q Consensus       514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~-~~~~~~~~--------~~-  583 (679)
                         .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+......... ........        .. 
T Consensus       160 ---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (322)
T d1s9ja_         160 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  236 (322)
T ss_dssp             ---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred             ---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence               234579999999999999999999999999999999999999997544321110000 00000000        00 


Q ss_pred             -------------eeeeecccc---cCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhh
Q 005750          584 -------------VISIVDPVL---IGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS  632 (679)
Q Consensus       584 -------------~~~~~d~~l---~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~  632 (679)
                                   ..+..+...   .... ......++.+++.+||+.||.+|||++|+++  .+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             ---------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence                         000000000   0000 0011246889999999999999999999987  46543


No 17 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-48  Score=397.33  Aligned_cols=257  Identities=26%  Similarity=0.420  Sum_probs=204.4

Q ss_pred             HHHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      ..+++.+.||+|+||.||+|++++++.||||+++.. ....+.|.+|+.++++++|||||++++++.+ +..++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence            457889999999999999999998889999999754 3345789999999999999999999999865 45789999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI  516 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~  516 (679)
                      +|+|.+++... ....+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.........
T Consensus        95 ~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~  170 (285)
T d1fmka3          95 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  170 (285)
T ss_dssp             TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCcee
Confidence            99999988754 24569999999999999999999999   999999999999999999999999999998765544444


Q ss_pred             cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCCC
Q 005750          517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV  596 (679)
Q Consensus       517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  596 (679)
                      .....||+.|+|||++.++.++.++|||||||++|||++|..|+.....  .......+.    .+...         ..
T Consensus       171 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~--~~~~~~~i~----~~~~~---------~~  235 (285)
T d1fmka3         171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE----RGYRM---------PC  235 (285)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH----TTCCC---------CC
T ss_pred             eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC--HHHHHHHHH----hcCCC---------CC
Confidence            4445689999999999999999999999999999999997666652221  122222222    12111         11


Q ss_pred             CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          597 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       597 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                      +.....++.+++.+||+.||++|||+++|+++|++...
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            22234578899999999999999999999999998665


No 18 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-48  Score=399.63  Aligned_cols=247  Identities=23%  Similarity=0.357  Sum_probs=202.7

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      .|++.+.||+|+||+||+|+++ +|+.||||++.+..   ....+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            4778999999999999999986 69999999986432   2344678999999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+++|+|.+++..   ...+++..++.++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+|+......
T Consensus        89 y~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          89 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             ccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence            9999999998873   5679999999999999999999999   999999999999999999999999999998765432


Q ss_pred             -ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750          514 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL  592 (679)
Q Consensus       514 -~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  592 (679)
                       ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+..   .+.   .. +..+..      .+
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~---~~-i~~~~~------~~  229 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY---LIF---QK-IIKLEY------DF  229 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---HH-HHTTCC------CC
T ss_pred             cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH---HHH---HH-HHcCCC------CC
Confidence             22233456999999999999999999999999999999999999999743221   111   11 112211      11


Q ss_pred             cCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                          +......+.+||.+||+.||.+|||++|+++
T Consensus       230 ----p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         230 ----PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             ----CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             ----CccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence                1122346889999999999999999999754


No 19 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.7e-47  Score=397.49  Aligned_cols=250  Identities=25%  Similarity=0.369  Sum_probs=190.3

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      ..|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+++|++++||||+++++++.+++..|+||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            34788999999999999999986 68999999997543 23346688999999999999999999999999999999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc---CCCcEEEeeccCcccccc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfgla~~~~~  511 (679)
                      |+||+|.+++.   ....+++..+..++.||+.||+|||+   ++|+||||||+||++.   +++.+||+|||+|+....
T Consensus        89 ~~gg~L~~~l~---~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          89 VSGGELFDRIV---EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             CCSCBHHHHHH---TCSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             cCCCcHHHhhh---cccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999997   35679999999999999999999999   9999999999999994   578999999999987644


Q ss_pred             CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccc
Q 005750          512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV  591 (679)
Q Consensus       512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  591 (679)
                      ...  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......   ....   .... +...  ... 
T Consensus       163 ~~~--~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~~---~i~~-~~~~--~~~-  230 (307)
T d1a06a_         163 GSV--LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFE---QILK-AEYE--FDS-  230 (307)
T ss_dssp             ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH---HHHT-TCCC--CCT-
T ss_pred             CCe--eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH---HHHH---HHhc-cCCC--CCC-
Confidence            322  23456999999999999999999999999999999999999999743221   1111   1111 1110  011 


Q ss_pred             ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          592 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       592 l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                         .........+.+++.+||+.||++|||++|+++
T Consensus       231 ---~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         231 ---PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             ---TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ---ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence               111222346889999999999999999999987


No 20 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-47  Score=402.36  Aligned_cols=258  Identities=27%  Similarity=0.420  Sum_probs=206.6

Q ss_pred             HHHHhhccccCcCccEEEEEEEEcC------CcEEEEEEecCC-cchhHHHHHHHHHHHHhc-cCCCcccccccccccce
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADS-CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ  427 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~  427 (679)
                      ...+++.+.||+|+||+||+|++..      ...||+|++... .......+.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3457789999999999999998753      236999998654 334456789999999998 89999999999999999


Q ss_pred             EEEEEEecCCCcHhhhhcccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCC
Q 005750          428 RILVYEYMHNGTLRDRLHGSVN--------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS  487 (679)
Q Consensus       428 ~~lV~E~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp  487 (679)
                      .++|||||++|+|.++++....                    ...+++..++.++.||++||+|||+   ++|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCch
Confidence            9999999999999999975421                    2358999999999999999999999   9999999999


Q ss_pred             CCccccCCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccc
Q 005750          488 SNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF  565 (679)
Q Consensus       488 ~NIll~~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~  565 (679)
                      +|||++.++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+...
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876544332 2234457999999999999999999999999999999998 8999974433


Q ss_pred             cchhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 005750          566 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQD  631 (679)
Q Consensus       566 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  631 (679)
                      ..  .+.+    .+..+..         ...+...+..+.+|+.+||+.||++|||++||++.|..
T Consensus       273 ~~--~~~~----~~~~~~~---------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         273 DA--NFYK----LIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             SH--HHHH----HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH--HHHH----HHhcCCC---------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            21  2222    2222211         11122234578999999999999999999999999863


No 21 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-47  Score=392.25  Aligned_cols=259  Identities=25%  Similarity=0.404  Sum_probs=200.9

Q ss_pred             HHHhhccccCcCccEEEEEEEEcC----CcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      ..|++.+.||+|+||.||+|++..    +..||||.++... ....+.+.+|++++++++||||+++++++.+ +..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEE
Confidence            457788999999999999998753    4578999986543 3345679999999999999999999999964 578999


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      |||+++|+|.+++..  ....+++..++.++.||++||+|||+   ++|+||||||+||+++.++.+||+|||+|+....
T Consensus        86 ~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_          86 MELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             EECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            999999999998764  35679999999999999999999999   9999999999999999999999999999987665


Q ss_pred             CcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750          512 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP  590 (679)
Q Consensus       512 ~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  590 (679)
                      ..........||+.|+|||++.+..++.++|||||||++|||++ |.+||......   .+...    +..+....    
T Consensus       161 ~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~---~~~~~----i~~~~~~~----  229 (273)
T d1mp8a_         161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGR----IENGERLP----  229 (273)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHH----HHTTCCCC----
T ss_pred             CcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH---HHHHH----HHcCCCCC----
Confidence            44444445568999999999999999999999999999999998 89999744332   22222    22222111    


Q ss_pred             cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750          591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK  637 (679)
Q Consensus       591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~  637 (679)
                           .+...+..+.+|+.+||+.||++|||++||++.|+.+++.++
T Consensus       230 -----~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k  271 (273)
T d1mp8a_         230 -----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  271 (273)
T ss_dssp             -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence                 122234578999999999999999999999999999876543


No 22 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=5.5e-47  Score=400.76  Aligned_cols=250  Identities=21%  Similarity=0.350  Sum_probs=208.1

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      .|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||+
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            4778899999999999999875 799999999987666667788999999999999999999999999999999999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc--CCCcEEEeeccCccccccCcc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      ||+|.+.+..  ....+++.+++.++.||+.||+|||+   +||+||||||+|||++  .++.+||+|||+|........
T Consensus       110 gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         110 GGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             CCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             CChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence            9999988764  34579999999999999999999999   9999999999999997  678999999999988755432


Q ss_pred             cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                        .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.+..   ....   . +..+...  +..    
T Consensus       185 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~---~-i~~~~~~--~~~----  249 (352)
T d1koba_         185 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQ---N-VKRCDWE--FDE----  249 (352)
T ss_dssp             --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---H-HHHCCCC--CCS----
T ss_pred             --eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCCCC--CCc----
Confidence              23456899999999999999999999999999999999999999743322   1111   1 1111111  011    


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .........+.+|+.+||+.||.+|||++|+++
T Consensus       250 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         250 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111222346889999999999999999999986


No 23 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=4.3e-47  Score=401.31  Aligned_cols=251  Identities=21%  Similarity=0.318  Sum_probs=208.1

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      .|++.+.||+|+||.||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||+
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            5788899999999999999876 699999999987766667889999999999999999999999999999999999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc--CCCcEEEeeccCccccccCcc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      ||+|.+++..  ....+++..++.++.||+.||+|||+   +||+||||||+|||++  .++.+||+|||+++.......
T Consensus       107 gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         107 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             SCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             CCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            9999999864  24569999999999999999999999   9999999999999995  468899999999987654432


Q ss_pred             cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..   ..   ...... +...  ++...  
T Consensus       182 --~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~---~~~i~~-~~~~--~~~~~--  248 (350)
T d1koaa2         182 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ET---LRNVKS-CDWN--MDDSA--  248 (350)
T ss_dssp             --EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHHH-TCCC--SCCGG--
T ss_pred             --cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH---HH---HHHHHh-CCCC--CCccc--
Confidence              23456899999999999999999999999999999999999999744321   11   111111 1110  00111  


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA  628 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  628 (679)
                        .......+.+++.+||+.||++|||++|+++.
T Consensus       249 --~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         249 --FSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             --GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             --ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              11223468899999999999999999999873


No 24 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=8.1e-47  Score=392.52  Aligned_cols=246  Identities=28%  Similarity=0.373  Sum_probs=202.0

Q ss_pred             HHHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      ...|+..+.||+|+||+||+|++. +|+.||||++....   ....+.+.+|+++|++++|||||++++++.+++..++|
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            345777899999999999999876 68999999987543   23446789999999999999999999999999999999


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      ||||.+|+|..++.   ....+++..++.++.||+.||.|||+   +||+||||||+|||++.++.+||+|||+|.....
T Consensus        94 ~E~~~~g~l~~~~~---~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          94 MEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EECCSEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EEecCCCchHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99999999977665   35679999999999999999999999   9999999999999999999999999999987544


Q ss_pred             CcccccccccCCccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750          512 DLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV  588 (679)
Q Consensus       512 ~~~~~~~~~~gt~~y~aPE~l~~---~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (679)
                      .     ....||+.|+|||++.+   ..++.++|||||||++|||++|+.||......      +........ ......
T Consensus       168 ~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~------~~~~~i~~~-~~~~~~  235 (309)
T d1u5ra_         168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-ESPALQ  235 (309)
T ss_dssp             B-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHS-CCCCCS
T ss_pred             C-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhC-CCCCCC
Confidence            2     23469999999999864   46899999999999999999999999733221      111122221 111111


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          589 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       589 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .        ......+.+++.+||+.||.+|||++|+++
T Consensus       236 ~--------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 S--------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             C--------CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            1        112346889999999999999999999976


No 25 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-47  Score=388.22  Aligned_cols=251  Identities=29%  Similarity=0.476  Sum_probs=199.3

Q ss_pred             HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc-cceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lV~E~~~  436 (679)
                      .+++.+.||+|+||.||+|+++ |+.||||+++..  ...+.+.+|++++++++||||++++|++.+ .+..++||||++
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~   84 (262)
T d1byga_           8 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   84 (262)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             HeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence            3567899999999999999986 789999999754  345779999999999999999999998854 566899999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcccc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI  516 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~~  516 (679)
                      +|+|.+++... ....+++..+++++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......   
T Consensus        85 ~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~---  157 (262)
T d1byga_          85 KGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---  157 (262)
T ss_dssp             TEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCC---
Confidence            99999999743 23458999999999999999999999   999999999999999999999999999998754432   


Q ss_pred             cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccCC
Q 005750          517 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN  595 (679)
Q Consensus       517 ~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  595 (679)
                       ....++..|+|||++.+..+++++|||||||++|||+| |+.||.....   ..+...+    .++....         
T Consensus       158 -~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~---~~~~~~i----~~~~~~~---------  220 (262)
T d1byga_         158 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRV----EKGYKMD---------  220 (262)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG---GGHHHHH----TTTCCCC---------
T ss_pred             -ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH---HHHHHHH----HcCCCCC---------
Confidence             23347889999999998899999999999999999998 7888763322   2233322    2222111         


Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          596 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       596 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .+......+.+++.+||+.||.+|||++||+++|++++.-
T Consensus       221 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            1222335788999999999999999999999999998653


No 26 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-47  Score=390.31  Aligned_cols=250  Identities=22%  Similarity=0.295  Sum_probs=204.3

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc------chhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC------SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI  429 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  429 (679)
                      ..|++.+.||+|+||+||+|+++ +|+.||||++.+..      ....+.+.+|+++|++++|||||++++++.+++..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            35778899999999999999985 79999999986432      123578999999999999999999999999999999


Q ss_pred             EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC----cEEEeeccC
Q 005750          430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGL  505 (679)
Q Consensus       430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfgl  505 (679)
                      +|||||++|+|.+++..   ...+++..++.++.|++.||+|||+   ++|+||||||+||+++.++    .+||+|||+
T Consensus        90 iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          90 LILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhh
Confidence            99999999999999974   4579999999999999999999999   9999999999999998776    599999999


Q ss_pred             ccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750          506 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI  585 (679)
Q Consensus       506 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  585 (679)
                      +........  .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+...   ...   . +..+...
T Consensus       164 a~~~~~~~~--~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~---~-i~~~~~~  234 (293)
T d1jksa_         164 AHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLA---N-VSAVNYE  234 (293)
T ss_dssp             CEECTTSCB--CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH---H-HHTTCCC
T ss_pred             hhhcCCCcc--ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH---HHH---H-HHhcCCC
Confidence            987654322  233468999999999999999999999999999999999999997433211   111   1 1111110


Q ss_pred             eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .  .+....    .....+.+++.+||+.||.+|||++|+++
T Consensus       235 ~--~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         235 F--EDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             C--CHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C--CchhcC----CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0  000001    12346789999999999999999999976


No 27 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-46  Score=391.90  Aligned_cols=245  Identities=24%  Similarity=0.358  Sum_probs=204.8

Q ss_pred             HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      |++.+.||+|+||.||+|+.+ +|+.||||++.+..   ....+.+.+|+.+|++++||||+++++++.+++..|+||||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceec
Confidence            678899999999999999975 79999999997532   23457788999999999999999999999999999999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      ++||+|.+++..   ...+++..++.++.||+.||+|||+   +||+||||||+|||++.+|.+||+|||+|+.......
T Consensus        87 ~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          87 ANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             CTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             cCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence            999999999884   5678999999999999999999999   9999999999999999999999999999987544322


Q ss_pred             cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                       .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..   .+.+    .+..+..      .+..
T Consensus       161 -~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~---~~~~----~i~~~~~------~~p~  226 (337)
T d1o6la_         161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE----LILMEEI------RFPR  226 (337)
T ss_dssp             -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CCCT
T ss_pred             -ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH---HHHH----HHhcCCC------CCCc
Confidence             233456999999999999999999999999999999999999999854321   1111    1222211      1111


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL  627 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~  627 (679)
                      .    ....+.+||.+||++||.+||+     ++|+++
T Consensus       227 ~----~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         227 T----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             T----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             c----CCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            2    2346789999999999999995     788876


No 28 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.5e-46  Score=390.14  Aligned_cols=257  Identities=27%  Similarity=0.442  Sum_probs=208.1

Q ss_pred             HHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCcc-hhHHHHHHHHHHHHhccCCCcccccccccccceEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL  430 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l  430 (679)
                      .+++.+.||+|+||+||+|+++      +++.||||+++.... ...+++.+|++++++++||||+++++++...+..++
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~   93 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL   93 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence            4677899999999999999875      357899999976443 345679999999999999999999999999999999


Q ss_pred             EEEecCCCcHhhhhcccC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCC
Q 005750          431 VYEYMHNGTLRDRLHGSV---------------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN  489 (679)
Q Consensus       431 V~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~N  489 (679)
                      +|||+++|+|.+++....                     ....+++..++.++.|++.||+|||+   ++|+||||||+|
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivHrDlKp~N  170 (301)
T d1lufa_          94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRN  170 (301)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEeeEEcccc
Confidence            999999999999986421                     13358999999999999999999999   999999999999


Q ss_pred             ccccCCCcEEEeeccCccccccCc-ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCcccccc
Q 005750          490 ILLDINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGK-KPVSVEDFGA  567 (679)
Q Consensus       490 Ill~~~~~~kL~Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~-~pf~~~~~~~  567 (679)
                      ||++.++.+||+|||+|+...... ........+++.|+|||.+.+..++.++|||||||++|||++|. +||...+.  
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~--  248 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--  248 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH--
Confidence            999999999999999998654332 22233456889999999999999999999999999999999986 56653222  


Q ss_pred             hhhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 005750          568 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI  633 (679)
Q Consensus       568 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  633 (679)
                       ..+..    .+..+.....         +...+..+.+|+.+||+.+|++||||.||+++|+++.
T Consensus       249 -~e~~~----~v~~~~~~~~---------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         249 -EEVIY----YVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             -HHHHH----HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             -HHHHH----HHHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence             12222    2233332211         1223347889999999999999999999999999875


No 29 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=8.5e-46  Score=386.23  Aligned_cols=243  Identities=22%  Similarity=0.353  Sum_probs=203.9

Q ss_pred             HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      |++.+.||+|+||+||+|+++ +|+.||||++++..   ....+.+.+|+.++++++||||+++++++.+++..|+||||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            677899999999999999986 69999999986432   23456789999999999999999999999999999999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      ++||+|..++.   ....+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        86 ~~gg~l~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~-  158 (316)
T d1fota_          86 IEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-  158 (316)
T ss_dssp             CCSCBHHHHHH---HTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-
T ss_pred             cCCcccccccc---ccccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEecccc-
Confidence            99999999887   45678899999999999999999999   999999999999999999999999999998765432 


Q ss_pred             cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                         ....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+..      +....... +..      .   
T Consensus       159 ---~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~i~~-~~~------~---  219 (316)
T d1fota_         159 ---YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILN-AEL------R---  219 (316)
T ss_dssp             ---CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHH-CCC------C---
T ss_pred             ---ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH------HHHHHHHc-CCC------C---
Confidence               3456999999999999999999999999999999999999999743221      11112221 111      0   


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA  628 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~  628 (679)
                       .+......+.+++.+||+.||.+||     |++|+++.
T Consensus       220 -~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         220 -FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence             1112234688999999999999996     89999863


No 30 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=7.7e-46  Score=380.18  Aligned_cols=257  Identities=25%  Similarity=0.372  Sum_probs=202.0

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccc----eEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRI  429 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~  429 (679)
                      .|++.+.||+|+||+||+|++. +|+.||||+++...   ....+.+.+|+++++.++||||+++++++...+    ..|
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence            4778899999999999999875 79999999997543   234567899999999999999999999986643    478


Q ss_pred             EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      +||||++||+|.+++..   ...+++.+++.++.||+.||+|||+   +||+||||||+|||++.++..+++|||.+...
T Consensus        88 lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEECCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhhh
Confidence            99999999999998873   4679999999999999999999999   99999999999999999999999999998765


Q ss_pred             ccCcc--cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750          510 EEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI  587 (679)
Q Consensus       510 ~~~~~--~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (679)
                      .....  .......||+.|+|||++.+..+++++|||||||++|||+||+.||...+.      .+.....+....... 
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~~~~~~~~~~-  234 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIPP-  234 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCCG-
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH------HHHHHHHHhcCCCCC-
Confidence            33222  223345699999999999999999999999999999999999999974322      122222333222111 


Q ss_pred             ecccccCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhh
Q 005750          588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSI  633 (679)
Q Consensus       588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~  633 (679)
                        ....    ...+..+.+++.+||++||.+|| |++++++.|.++.
T Consensus       235 --~~~~----~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         235 --SARH----EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             --GGTS----SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             --chhc----cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence              0111    12234688999999999999999 8999999888764


No 31 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-46  Score=387.04  Aligned_cols=255  Identities=23%  Similarity=0.413  Sum_probs=202.9

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCc----EEEEEEecCC-cchhHHHHHHHHHHHHhccCCCcccccccccccceEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      .|++.+.||+|+||+||+|.+. +|+    +||+|.++.. .....+++.+|++++++++|||||+++|+|.++ ..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence            3677899999999999999875 343    6899988654 334567899999999999999999999999875 46788


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      +|++.+|+|.+.+..  ....+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        89 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          89 TQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             EEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            999999999998875  35679999999999999999999999   9999999999999999999999999999987654


Q ss_pred             Cccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeeeeec
Q 005750          512 DLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD  589 (679)
Q Consensus       512 ~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  589 (679)
                      .... ......||+.|+|||++.++.++.++|||||||++|||+| |+.||.+.....   +...    +..+...    
T Consensus       164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~----i~~~~~~----  232 (317)
T d1xkka_         164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERL----  232 (317)
T ss_dssp             TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHH----HHHTCCC----
T ss_pred             ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcCCCC----
Confidence            3322 2233458999999999999999999999999999999998 889987443322   2222    2222111    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          590 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       590 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                           ..+...+..+.+|+.+||+.||.+|||++||++.|+.+..
T Consensus       233 -----~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         233 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             -----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence                 1122234578899999999999999999999999988764


No 32 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-45  Score=384.09  Aligned_cols=256  Identities=29%  Similarity=0.454  Sum_probs=205.7

Q ss_pred             hhccccCcCccEEEEEEEEcC----CcEEEEEEecCC-cchhHHHHHHHHHHHHhccCCCcccccccccc-cceEEEEEE
Q 005750          360 NFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVYE  433 (679)
Q Consensus       360 ~~~~~LG~G~~g~Vy~a~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lV~E  433 (679)
                      +|.++||+|+||+||+|++.+    ...||||+++.. .....++|.+|+++|++++||||++++|++.. +...++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            456789999999999998753    236899999753 34456789999999999999999999999765 568899999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+++|+|.+++...  ...+++..+++++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||+++......
T Consensus       110 ~~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         110 YMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             CCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             EeecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            99999999998753  5567888999999999999999999   999999999999999999999999999998765432


Q ss_pred             cc---ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750          514 TH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP  590 (679)
Q Consensus       514 ~~---~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  590 (679)
                      ..   ......||+.|+|||.+.+..++.++||||||+++|||+||+.||.....  ...+..+    +..+....  . 
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~--~~~~~~~----i~~g~~~~--~-  255 (311)
T d1r0pa_         185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVY----LLQGRRLL--Q-  255 (311)
T ss_dssp             CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHH----HHTTCCCC--C-
T ss_pred             cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC--HHHHHHH----HHcCCCCC--C-
Confidence            22   22234689999999999999999999999999999999998888763221  1112221    12222111  1 


Q ss_pred             cccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                            +...+..+.+++.+||+.||++||+|+||++.|+++...
T Consensus       256 ------p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         256 ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ------cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                  112234788999999999999999999999999999763


No 33 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-46  Score=385.52  Aligned_cols=262  Identities=26%  Similarity=0.401  Sum_probs=200.1

Q ss_pred             HHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCcccccccccc-cc
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE-EH  426 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~-~~  426 (679)
                      ...|++.++||+|+||.||+|++.      +++.||||+++... ....+.+.+|..++.++ +|+||+.+++++.. +.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            346788999999999999999864      24689999997543 34456788888888887 68999999998765 45


Q ss_pred             eEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750          427 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD  493 (679)
Q Consensus       427 ~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~  493 (679)
                      ..++|||||++|+|.++++...             ....+++..++.++.||++||+|||+   ++|+||||||+|||++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeEC
Confidence            6899999999999999997532             13458999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCcccccchhhH
Q 005750          494 INMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGK-KPVSVEDFGAELNI  571 (679)
Q Consensus       494 ~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~-~pf~~~~~~~~~~~  571 (679)
                      +++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+||. .||......  ..+
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~--~~~  246 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEF  246 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--HHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence            9999999999999875443322 233456899999999999999999999999999999999964 577533222  112


Q ss_pred             HHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          572 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       572 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .    ..+..+.....         +......+.+++.+||+.||++|||++||++.|+++++.
T Consensus       247 ~----~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         247 C----RRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             H----HHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H----HHHhcCCCCCC---------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            2    22222322111         112234688999999999999999999999999998754


No 34 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.5e-46  Score=383.91  Aligned_cols=260  Identities=25%  Similarity=0.439  Sum_probs=208.1

Q ss_pred             HHHhhccccCcCccEEEEEEEEcC--------CcEEEEEEecCCcc-hhHHHHHHHHHHHHhc-cCCCcccccccccccc
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH  426 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~  426 (679)
                      ..|++.+.||+|+||.||+|+...        +..||||+++.... ....++.+|...+.++ +|||||+++++|.+++
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            357788999999999999998642        35799999976543 4457888999999888 7999999999999999


Q ss_pred             eEEEEEEecCCCcHhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc
Q 005750          427 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD  493 (679)
Q Consensus       427 ~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~  493 (679)
                      ..++||||+++|+|.+++....             ....+++.+++.++.||+.||+|||+   ++|+||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceeec
Confidence            9999999999999999997543             13468999999999999999999999   9999999999999999


Q ss_pred             CCCcEEEeeccCccccccCccc-ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhH
Q 005750          494 INMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI  571 (679)
Q Consensus       494 ~~~~~kL~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~  571 (679)
                      .++.+||+|||+++........ ......+++.|+|||.+.++.+++++|||||||++|||++ |+.||......   .+
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~---~~  246 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---EL  246 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HH
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH---HH
Confidence            9999999999999876554332 2334568899999999999999999999999999999998 78888633221   12


Q ss_pred             HHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          572 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       572 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .    ..+..+.....         +...+..+.+|+.+||+.||.+|||++||++.|+++...
T Consensus       247 ~----~~i~~~~~~~~---------p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         247 F----KLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             H----HHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H----HHHHcCCCCCC---------CccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence            2    22333322111         112234688999999999999999999999999998764


No 35 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-46  Score=378.89  Aligned_cols=255  Identities=27%  Similarity=0.409  Sum_probs=197.4

Q ss_pred             HHHhhccccCcCccEEEEEEEEcC--C--cEEEEEEecCC---cchhHHHHHHHHHHHHhccCCCcccccccccccceEE
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMKD--G--KEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI  429 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~~--~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  429 (679)
                      ..|++.+.||+|+||.||+|+++.  +  ..||||++.+.   .....+.|.+|+++|++++||||++++|++.++ ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            346788999999999999998652  2  47899998654   233457899999999999999999999999764 678


Q ss_pred             EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      +||||+++|++.+++...  ...+++..++.++.||+.||+|||+   ++|+||||||+||+++.++.+||+|||+++..
T Consensus        87 lv~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeeeecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhc
Confidence            999999999999887753  4569999999999999999999999   99999999999999999999999999999986


Q ss_pred             ccCccc--ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhHhcCCeee
Q 005750          510 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS  586 (679)
Q Consensus       510 ~~~~~~--~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  586 (679)
                      ......  ......|+..|+|||++.+..++.++|||||||++|||+| |+.||.+.+..   ..   .....+.+....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~---~~---~~~i~~~~~~~~  235 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QI---LHKIDKEGERLP  235 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HH---HHHHHTSCCCCC
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH---HH---HHHHHhCCCCCC
Confidence            544332  2233457889999999999999999999999999999998 89999743221   12   222222222111


Q ss_pred             eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 005750          587 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS  632 (679)
Q Consensus       587 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  632 (679)
                               .+...+..+.+|+.+||+.||++|||++||++.|++.
T Consensus       236 ---------~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         236 ---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                     1122234788999999999999999999999999875


No 36 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-45  Score=382.45  Aligned_cols=264  Identities=29%  Similarity=0.425  Sum_probs=212.6

Q ss_pred             HHHHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhc-cCCCccccccccccc
Q 005750          354 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE  425 (679)
Q Consensus       354 l~~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~  425 (679)
                      +....+++.++||+|+||.||+|++.      +++.||||+++... ......+.+|+.+++++ +|||||++++++.+.
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            33456778999999999999999863      46789999997643 34556789999999999 699999999999999


Q ss_pred             ceEEEEEEecCCCcHhhhhcccC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCc
Q 005750          426 HQRILVYEYMHNGTLRDRLHGSV---------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI  490 (679)
Q Consensus       426 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NI  490 (679)
                      +..++||||+++|+|.++++...               ....+++..+..++.||++||+|||+   ++++||||||+||
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NI  176 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI  176 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccc
Confidence            99999999999999999997542               23368999999999999999999999   9999999999999


Q ss_pred             cccCCCcEEEeeccCccccccCcc-cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCcccccch
Q 005750          491 LLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE  568 (679)
Q Consensus       491 ll~~~~~~kL~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~ellt-G~~pf~~~~~~~~  568 (679)
                      +++.++.+|++|||.++....... .......||+.|+|||++.+..++.++|||||||++|||+| |.+||......  
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~--  254 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--  254 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH--
Confidence            999999999999999987655433 22334568999999999999999999999999999999999 55555422221  


Q ss_pred             hhHHHHHHHhHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          569 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       569 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      ..+.+.    +..+..         ...+...+..+.+|+.+||+.||.+||||+||+++|++.+..
T Consensus       255 ~~~~~~----i~~~~~---------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         255 SKFYKM----IKEGFR---------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHH----HHHTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHH----HhcCCC---------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            112222    222211         111122335789999999999999999999999999987653


No 37 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=3.5e-45  Score=374.35  Aligned_cols=249  Identities=25%  Similarity=0.309  Sum_probs=202.8

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---------hhHHHHHHHHHHHHhcc-CCCcccccccccccc
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---------HRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH  426 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~  426 (679)
                      .|++.+.||+|+||+||+|+.. +|+.||||++.....         ...+.+.+|+.++++++ ||||+++++++.+++
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            4667899999999999999875 799999999865321         12346889999999997 999999999999999


Q ss_pred             eEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCc
Q 005750          427 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS  506 (679)
Q Consensus       427 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla  506 (679)
                      ..|+||||+++|+|.++++.   ...+++..++.++.||++||+|||+   +||+||||||+||+++.++.+||+|||++
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchhe
Confidence            99999999999999999974   4579999999999999999999999   99999999999999999999999999999


Q ss_pred             cccccCcccccccccCCccccCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHh
Q 005750          507 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK  580 (679)
Q Consensus       507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~  580 (679)
                      +.......  .....||+.|+|||.+.      ...++.++||||+||++|+|++|+.||......   ...    ..+.
T Consensus       158 ~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~---~~~----~~i~  228 (277)
T d1phka_         158 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LML----RMIM  228 (277)
T ss_dssp             EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHH
T ss_pred             eEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH---HHH----HHHH
Confidence            87655332  23456999999999874      345788999999999999999999999843321   111    1111


Q ss_pred             cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          581 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       581 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .+...      ...........++.+++.+||++||++|||++||++
T Consensus       229 ~~~~~------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         229 SGNYQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HTCCC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hCCCC------CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            22211      011111223357889999999999999999999875


No 38 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-45  Score=384.37  Aligned_cols=258  Identities=29%  Similarity=0.492  Sum_probs=205.5

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-CCc--EEEEEEecCC-cchhHHHHHHHHHHHHhc-cCCCcccccccccccceEEEE
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-DGK--EVAVKIMADS-CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      ..+++.+.||+|+||.||+|+++ +|.  .||||++... .....+.+.+|+++|+++ +||||+++++++.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            44567899999999999999886 344  5788887643 333556799999999999 799999999999999999999


Q ss_pred             EEecCCCcHhhhhccc-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcE
Q 005750          432 YEYMHNGTLRDRLHGS-------------VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA  498 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~  498 (679)
                      |||+++|+|.++++..             .....+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            9999999999999753             134679999999999999999999999   999999999999999999999


Q ss_pred             EEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCC-CCCcccccchhhHHHHHHH
Q 005750          499 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKK-PVSVEDFGAELNIVHWARS  577 (679)
Q Consensus       499 kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~-pf~~~~~~~~~~~~~~~~~  577 (679)
                      ||+|||+++........  ....||..|+|||.+.+..++.++|||||||++|||++|.. ||...+   ...+.+    
T Consensus       167 kl~DfG~a~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~---~~~~~~----  237 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKK--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---CAELYE----  237 (309)
T ss_dssp             EECCTTCEESSCEECCC------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---HHHHHH----
T ss_pred             EEccccccccccccccc--cceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC---HHHHHH----
Confidence            99999999865443322  23458999999999999999999999999999999999764 565222   112222    


Q ss_pred             hHhcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          578 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       578 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .+..+...         ..+...+..+.+|+.+||+.||++||||+||++.|+++.+.
T Consensus       238 ~i~~~~~~---------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         238 KLPQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HGGGTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHhcCCC---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            12222111         11222345788999999999999999999999999998763


No 39 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-45  Score=379.42  Aligned_cols=256  Identities=20%  Similarity=0.195  Sum_probs=195.8

Q ss_pred             ccccCcCccEEEEEEEEc-CCcEEEEEEecCCcch-----hHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750          362 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM  435 (679)
Q Consensus       362 ~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~  435 (679)
                      .++||+|+||+||+|+++ +|+.||||+++.....     ..+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            468999999999999976 6999999998653221     1346889999999999999999999999999999999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH  515 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~  515 (679)
                      .++++..+..   ....+++..+..++.||+.||+|||+   +||+||||||+|||++.++.+||+|||+++........
T Consensus        83 ~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          83 ETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             SEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             cchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence            9888877665   45678999999999999999999999   99999999999999999999999999999876554322


Q ss_pred             ccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeec-----
Q 005750          516 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD-----  589 (679)
Q Consensus       516 ~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----  589 (679)
                       .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+   ....+.............+     
T Consensus       157 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~---~l~~i~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ua2a_         157 -YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPDMCSLP  232 (299)
T ss_dssp             -CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             -ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH---HHHHHHHhcCCCChhhccchhccc
Confidence             223468999999999865 467999999999999999999999997443221   1111111111100000000     


Q ss_pred             ----ccccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          590 ----PVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       590 ----~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                          .......+     ......+.+|+.+||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         233 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence                00000011     112346889999999999999999999986


No 40 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.4e-45  Score=379.69  Aligned_cols=249  Identities=19%  Similarity=0.298  Sum_probs=203.3

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEecC
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH  436 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~  436 (679)
                      .|++.+.||+|+||+||+|.++ +|+.||||+++... .....+.+|+++|++++||||+++++++.+++..|+|||||+
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            3677899999999999999986 68999999997653 344668899999999999999999999999999999999999


Q ss_pred             CCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC--CCcEEEeeccCccccccCcc
Q 005750          437 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       437 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfgla~~~~~~~~  514 (679)
                      ||+|.+++...  +..+++.+++.++.||+.||+|||+   +||+||||||+|||++.  ...+||+|||++........
T Consensus        85 gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          85 GLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            99999999742  3479999999999999999999999   99999999999999985  45899999999987654322


Q ss_pred             cccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccccC
Q 005750          515 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG  594 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  594 (679)
                        .....+++.|+|||.+.+..++.++||||+||++|+|++|+.||......   ..   ...... +...  ++.....
T Consensus       160 --~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~---~~---~~~i~~-~~~~--~~~~~~~  228 (321)
T d1tkia_         160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QI---IENIMN-AEYT--FDEEAFK  228 (321)
T ss_dssp             --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HH---HHHHHH-TCCC--CCHHHHT
T ss_pred             --ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH---HH---HHHHHh-CCCC--CChhhcc
Confidence              23345899999999999999999999999999999999999999743321   11   111111 1110  0000011


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          595 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       595 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .    ....+.+++.+||+.||.+|||++|+++
T Consensus       229 ~----~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         229 E----ISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             T----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1    1236789999999999999999999987


No 41 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=4.2e-45  Score=386.22  Aligned_cols=243  Identities=23%  Similarity=0.301  Sum_probs=203.7

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      .|++.+.||+|+||.||+|+++ +|+.||||++.+..   ....+.+.+|+++|+.++||||+++++++.+.+..++|||
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            5777899999999999999986 79999999986432   2334678999999999999999999999999999999999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCc
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL  513 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~  513 (679)
                      |+.+|+|.+++..   ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+......
T Consensus       122 ~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~  195 (350)
T d1rdqe_         122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred             cccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeeccccc
Confidence            9999999999874   4579999999999999999999999   999999999999999999999999999998765432


Q ss_pred             ccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeeccccc
Q 005750          514 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI  593 (679)
Q Consensus       514 ~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  593 (679)
                          ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+..   ..   ..... .+..      .. 
T Consensus       196 ----~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~---~~~i~-~~~~------~~-  257 (350)
T d1rdqe_         196 ----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QI---YEKIV-SGKV------RF-  257 (350)
T ss_dssp             ----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHH-HCCC------CC-
T ss_pred             ----ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH---HH---HHHHh-cCCC------CC-
Confidence                2356999999999999999999999999999999999999999743221   11   11111 1211      01 


Q ss_pred             CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 005750          594 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL  627 (679)
Q Consensus       594 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~  627 (679)
                         +......+.+++.+||+.||.+|+     |++|+++
T Consensus       258 ---p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             ---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ---CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence               112234688999999999999994     8999986


No 42 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-45  Score=383.15  Aligned_cols=246  Identities=25%  Similarity=0.379  Sum_probs=201.3

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc---chhHHHHHHHHHHHH-hccCCCcccccccccccceEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLS-RIHHRNLVPLIGYCEEEHQRILVY  432 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~hpnIv~l~~~~~~~~~~~lV~  432 (679)
                      .|++.+.||+|+||+||+|+++ +|+.||||++++..   ....+.+..|..++. .++||||+++++++.+++..|+||
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivm   82 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   82 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEE
Confidence            3677899999999999999886 69999999996532   223456667777765 689999999999999999999999


Q ss_pred             EecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccC
Q 005750          433 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED  512 (679)
Q Consensus       433 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~  512 (679)
                      ||+++|+|.+++..   ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++.....
T Consensus        83 Ey~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          83 EYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             eecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence            99999999999984   4578999999999999999999999   99999999999999999999999999999875543


Q ss_pred             cccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecccc
Q 005750          513 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL  592 (679)
Q Consensus       513 ~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  592 (679)
                      ... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..   .+..    .+..+..      ..
T Consensus       157 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~---~~~~----~i~~~~~------~~  222 (320)
T d1xjda_         157 DAK-TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFH----SIRMDNP------FY  222 (320)
T ss_dssp             TCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC
T ss_pred             ccc-ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCC------CC
Confidence            322 33456999999999999999999999999999999999999999743321   1111    1222211      11


Q ss_pred             cCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 005750          593 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIVL  627 (679)
Q Consensus       593 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~  627 (679)
                          +......+.+|+.+||+.||.+|||+. |+++
T Consensus       223 ----p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         223 ----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             ----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ----CccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                112234688999999999999999996 6754


No 43 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-45  Score=381.47  Aligned_cols=250  Identities=22%  Similarity=0.300  Sum_probs=196.3

Q ss_pred             HHhhc-cccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhc-cCCCcccccccccc----cceEEE
Q 005750          358 TNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE----EHQRIL  430 (679)
Q Consensus       358 ~~~~~-~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~----~~~~~l  430 (679)
                      .|.+. +.||+|+||+||+|++. +++.||||++++.     ..+.+|++++.++ +||||++++++|.+    +...|+
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i   86 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   86 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence            35555 46999999999999875 6899999998643     4577899987665 89999999999865    567899


Q ss_pred             EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC---CCcEEEeeccCcc
Q 005750          431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSR  507 (679)
Q Consensus       431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~Dfgla~  507 (679)
                      |||||+||+|.+++... ....+++.+++.++.||+.||+|||+   +||+||||||+|||++.   ++.+||+|||+|+
T Consensus        87 vmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~  162 (335)
T d2ozaa1          87 VMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  162 (335)
T ss_dssp             EEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceee
Confidence            99999999999999743 24579999999999999999999999   99999999999999975   5679999999998


Q ss_pred             ccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750          508 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI  587 (679)
Q Consensus       508 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (679)
                      .......  .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+......   ...+...+..+..   
T Consensus       163 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---~~~~~~~i~~~~~---  234 (335)
T d2ozaa1         163 ETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIRMGQY---  234 (335)
T ss_dssp             ECCCCCC--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCCSCSS---
T ss_pred             eccCCCc--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---HHHHHHHHhcCCC---
Confidence            7654332  2345699999999999999999999999999999999999999974332211   1111111111110   


Q ss_pred             ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                         .............+.+|+.+||+.||++|||+.|+++
T Consensus       235 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         235 ---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             ---SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence               0000111223457899999999999999999999987


No 44 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.8e-45  Score=377.15  Aligned_cols=269  Identities=26%  Similarity=0.357  Sum_probs=201.0

Q ss_pred             HhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccccc----eEEEEEEe
Q 005750          359 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY  434 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lV~E~  434 (679)
                      +.+.+.||+|+||.||+|+++ |+.||||+++... ........|+..+.+++||||+++++++.+++    ..++||||
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~-~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            446789999999999999974 8999999986432 21222334555556789999999999997643    68999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-----CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      +++|+|.++++.    ..+++..+++++.|++.||+|||+.     ..++|+||||||+|||++.++.+||+|||+++..
T Consensus        83 ~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             ccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence            999999999974    4699999999999999999999962     1369999999999999999999999999999876


Q ss_pred             ccCccc---ccccccCCccccCCcccCCCC------CCchhHHHHHHHHHHHHHhCCCCCCcccccch--------hhHH
Q 005750          510 EEDLTH---ISSVARGTVGYLDPEYYGNQQ------LTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIV  572 (679)
Q Consensus       510 ~~~~~~---~~~~~~gt~~y~aPE~l~~~~------~s~ksDVwSlGvll~elltG~~pf~~~~~~~~--------~~~~  572 (679)
                      ......   ......||+.|+|||++.+..      ++.++|||||||++|||+||..||........        ....
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence            543322   223456999999999987643      57799999999999999999988753221100        0111


Q ss_pred             HHHHHhHhcCCeeeeecccccCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhc
Q 005750          573 HWARSMIKKGDVISIVDPVLIGNV-KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK  637 (679)
Q Consensus       573 ~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~  637 (679)
                      +........+..    +|.+.... ..+....+.+++.+||+.||++|||+.||++.|+++...+.
T Consensus       239 ~~~~~~~~~~~~----~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~  300 (303)
T d1vjya_         239 EEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             HHHHHHHTTSCC----CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcccc----CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcC
Confidence            112222221111    12111111 23456679999999999999999999999999999887543


No 45 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.1e-44  Score=385.09  Aligned_cols=246  Identities=22%  Similarity=0.264  Sum_probs=196.7

Q ss_pred             HhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc---hhHHHHHH---HHHHHHhccCCCcccccccccccceEEEE
Q 005750          359 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVT---EVALLSRIHHRNLVPLIGYCEEEHQRILV  431 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~hpnIv~l~~~~~~~~~~~lV  431 (679)
                      |++.+.||+|+||.||+|+.. +|+.||||++.+...   .....+.+   |+++++.++|||||++++++.+++..|+|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            667899999999999999986 699999999864321   11223344   46667777899999999999999999999


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      |||++||+|.+++..   ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus        86 mE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             ECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            999999999999974   5678999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeeecc
Q 005750          512 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP  590 (679)
Q Consensus       512 ~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  590 (679)
                      ..   .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..........+.   .. .....      .
T Consensus       160 ~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~---~~-~~~~~------~  226 (364)
T d1omwa3         160 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RM-TLTMA------V  226 (364)
T ss_dssp             SC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH---HH-SSSCC------C
T ss_pred             Cc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-cccCC------C
Confidence            32   234569999999999864 56899999999999999999999999754433221111   11 11110      0


Q ss_pred             cccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750          591 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL  627 (679)
Q Consensus       591 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~  627 (679)
                      ..    +......+.++|.+||+.||.+|||     ++|+++
T Consensus       227 ~~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         227 EL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CC----CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CC----CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11    1122346889999999999999999     688875


No 46 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-45  Score=379.63  Aligned_cols=260  Identities=24%  Similarity=0.403  Sum_probs=210.4

Q ss_pred             HHHHhhccccCcCccEEEEEEEEc------CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccceE
Q 005750          356 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR  428 (679)
Q Consensus       356 ~~~~~~~~~LG~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~  428 (679)
                      ...+++.++||+|+||+||+|.++      +++.||||+++... ......+.+|++++++++||||+++++++..++..
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            345678899999999999999874      25789999997543 34456789999999999999999999999999999


Q ss_pred             EEEEEecCCCcHhhhhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEe
Q 005750          429 ILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS  501 (679)
Q Consensus       429 ~lV~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~  501 (679)
                      ++||||+++|+|.+++....       ....+++..+..++.|+++||.|||+   ++|+||||||+|||++.++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEe
Confidence            99999999999999886431       23457899999999999999999999   999999999999999999999999


Q ss_pred             eccCccccccCcccc-cccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCC-CCCCcccccchhhHHHHHHHhH
Q 005750          502 DFGLSRQAEEDLTHI-SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGK-KPVSVEDFGAELNIVHWARSMI  579 (679)
Q Consensus       502 Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~-~pf~~~~~~~~~~~~~~~~~~~  579 (679)
                      |||+++......... .....+++.|+|||.+.+..++.++|||||||++|||+||. .||....      ..+.... +
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~------~~~~~~~-i  248 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRF-V  248 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHH-H
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC------HHHHHHH-H
Confidence            999998765443322 23345899999999999999999999999999999999985 6665321      1122222 2


Q ss_pred             hcCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 005750          580 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK  634 (679)
Q Consensus       580 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  634 (679)
                      .++.....         +...+..+.+++.+||+.+|.+|||++||++.|++.++
T Consensus       249 ~~~~~~~~---------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         249 MEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HhCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            22222111         11223479999999999999999999999999988755


No 47 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=3.2e-44  Score=369.92  Aligned_cols=260  Identities=18%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             HHhhccccCcCccEEEEEEEEcCCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEec
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM  435 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~  435 (679)
                      .|++.++||+|+||+||+|++++|+.||||++.....  ...+.+.+|+.+|++++||||+++++++..++..++++|++
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~   82 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEee
Confidence            3567889999999999999999999999999965432  23578999999999999999999999999999999999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCccc
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH  515 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~~  515 (679)
                      .++.+..+..   ....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||.+.........
T Consensus        83 ~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          83 DQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             SEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             hhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence            8877777665   45789999999999999999999999   99999999999999999999999999999876543322


Q ss_pred             ccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC---ee---e--
Q 005750          516 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VI---S--  586 (679)
Q Consensus       516 ~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~---~--  586 (679)
                       .....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+  .+.+ +........   ..   .  
T Consensus       157 -~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~--~~~~-i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         157 -YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD--QLMR-IFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH-HHHHHCCCCTTTSTTGGGST
T ss_pred             -cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH--HHHH-HHHhhCCCChhhccchhhhh
Confidence             233358899999999865 456899999999999999999999997433221  1111 111111000   00   0  


Q ss_pred             -------eecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          587 -------IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       587 -------~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                             ...+.............+.+++.+||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   00000000111122346889999999999999999999974


No 48 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.7e-44  Score=370.09  Aligned_cols=263  Identities=20%  Similarity=0.274  Sum_probs=197.4

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc--hhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      .|++.+.||+|+||+||+|++. +|+.||||+++....  ...+++.+|++++++++||||+++++++.+++..|+||||
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~   82 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   82 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEee
Confidence            3566789999999999999975 799999999965432  2356789999999999999999999999999999999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      +.++ +.+.+... ....+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||.|+.......
T Consensus        83 ~~~~-~~~~~~~~-~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~  157 (298)
T d1gz8a_          83 LHQD-LKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  157 (298)
T ss_dssp             CSEE-HHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred             cCCc-hhhhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCcc
Confidence            9765 44444322 35679999999999999999999999   9999999999999999999999999999987654332


Q ss_pred             cccccccCCccccCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc--CCeeeee-cc
Q 005750          515 HISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK--GDVISIV-DP  590 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~-~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-d~  590 (679)
                      . .....||+.|+|||.+.... ++.++||||+||++|+|++|+.||.+.+..+  .+..........  ....... .+
T Consensus       158 ~-~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         158 T-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             C-TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             c-ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH--HHHHHHHhcCCCchhhcccccccc
Confidence            2 33346899999999876655 5889999999999999999999997433211  111111111000  0000000 00


Q ss_pred             cccC------CC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750          591 VLIG------NV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA  628 (679)
Q Consensus       591 ~l~~------~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  628 (679)
                      ....      ..     .......+.+++.+||+.||++|||++|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            0000      00     01122468899999999999999999999874


No 49 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-44  Score=369.03  Aligned_cols=238  Identities=25%  Similarity=0.395  Sum_probs=194.6

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcc------hhHHHHHHHHHHHHhcc--CCCcccccccccccceE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQR  428 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~  428 (679)
                      .|++.+.||+|+||+||+|+.. +|+.||||++.....      ....++.+|+.++++++  ||||+++++++.+++..
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            4678899999999999999876 789999999864321      12234678999999996  89999999999999999


Q ss_pred             EEEEEecCC-CcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-CCcEEEeeccCc
Q 005750          429 ILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLS  506 (679)
Q Consensus       429 ~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfgla  506 (679)
                      ++||||+.+ +++.+++..   ...+++..++.++.||++||+|||+   ++|+||||||+|||++. ++.+||+|||+|
T Consensus        85 ~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccc
Confidence            999999976 678888763   4679999999999999999999999   99999999999999985 579999999999


Q ss_pred             cccccCcccccccccCCccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCee
Q 005750          507 RQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI  585 (679)
Q Consensus       507 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  585 (679)
                      .......   .....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||....     .+       .+ +.. 
T Consensus       159 ~~~~~~~---~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~i-------~~-~~~-  221 (273)
T d1xwsa_         159 ALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI-------IR-GQV-  221 (273)
T ss_dssp             EECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------HH-CCC-
T ss_pred             eeccccc---ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-----HH-------hh-ccc-
Confidence            8654332   234569999999999977655 678999999999999999999997321     11       11 111 


Q ss_pred             eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                           ......    ..++.+++.+||+.||++|||++|+++
T Consensus       222 -----~~~~~~----s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         222 -----FFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -----CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----CCCCCC----CHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 111122    246889999999999999999999987


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-43  Score=365.46  Aligned_cols=262  Identities=20%  Similarity=0.256  Sum_probs=196.5

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-C-CcEEEEEEecCCcc--hhHHHHHHHHHHHHhc---cCCCccccccccc-----c
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-D-GKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----E  424 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~-----~  424 (679)
                      ..|++.++||+|+||+||+|++. + ++.||||+++....  .....+.+|+.+++.+   +||||++++++|.     .
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            35778899999999999999874 4 67799999864322  2234566788887776   7999999999884     3


Q ss_pred             cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeecc
Q 005750          425 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG  504 (679)
Q Consensus       425 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg  504 (679)
                      ....+++|||+.++.+......  ....+++..++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             CceEEEEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchh
Confidence            4578999999998877554432  45678999999999999999999999   999999999999999999999999999


Q ss_pred             CccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750          505 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV  584 (679)
Q Consensus       505 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  584 (679)
                      ++.......  ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+.  +.. +.........
T Consensus       162 ~~~~~~~~~--~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~-i~~~~~~~~~  236 (305)
T d1blxa_         162 LARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ--LGK-ILDVIGLPGE  236 (305)
T ss_dssp             SCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCCCG
T ss_pred             hhhhhcccc--cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHH--HHH-HHHhhCCCch
Confidence            988654332  23445699999999999999999999999999999999999999974432211  111 1111110000


Q ss_pred             eee------ec-------ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750          585 ISI------VD-------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA  628 (679)
Q Consensus       585 ~~~------~d-------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  628 (679)
                      ...      ..       ..............+.+|+.+||++||++|||++|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000      00       000001111223467899999999999999999999863


No 51 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-42  Score=361.10  Aligned_cols=262  Identities=19%  Similarity=0.229  Sum_probs=194.8

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCC--cchhHHHHHHHHHHHHhccCCCcccccccccc--------c
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------E  425 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--------~  425 (679)
                      ..|++.++||+|+||+||+|++. +|+.||||++...  .....+++.+|+++|++++||||+++++++..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            35677899999999999999975 7999999998543  23345678899999999999999999998744        4


Q ss_pred             ceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccC
Q 005750          426 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL  505 (679)
Q Consensus       426 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgl  505 (679)
                      +..++||||+.++.+.....   ....+++..++.++.|++.||.|||+   +||+||||||+|||++.++.+||+|||+
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecce
Confidence            46899999998877765544   45678999999999999999999999   9999999999999999999999999999


Q ss_pred             ccccccCcc---cccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhc
Q 005750          506 SRQAEEDLT---HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK  581 (679)
Q Consensus       506 a~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~  581 (679)
                      +........   .......||+.|+|||++.+. .+++++||||+||++|||++|+.||.+.+.....   .........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~---~~i~~~~~~  240 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL---ALISQLCGS  240 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCC
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHH---HHHHHhcCC
Confidence            976543221   122234689999999998765 6899999999999999999999999744322211   111111111


Q ss_pred             ---CCeee--------eecccccCCCCHH-------HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          582 ---GDVIS--------IVDPVLIGNVKIE-------SIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       582 ---~~~~~--------~~d~~l~~~~~~~-------~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                         .....        .+...........       ....+.+|+.+||++||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             CCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence               00000        0000000011111       1225678999999999999999999986


No 52 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-42  Score=367.02  Aligned_cols=265  Identities=24%  Similarity=0.250  Sum_probs=195.9

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccccc------cceEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQRIL  430 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------~~~~~l  430 (679)
                      +|+..++||+|+||+||+|++. +|+.||||++.....    ...+|+++|++++||||++++++|..      ..+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            4666789999999999999986 699999999975432    23479999999999999999998843      335789


Q ss_pred             EEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC-cEEEeeccCcccc
Q 005750          431 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQA  509 (679)
Q Consensus       431 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfgla~~~  509 (679)
                      ||||++++.+............+++..++.++.||+.||+|||+   +||+||||||+|||++.++ .+||+|||++...
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            99999876544443322356689999999999999999999999   9999999999999999765 8999999999876


Q ss_pred             ccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH-----------H
Q 005750          510 EEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR-----------S  577 (679)
Q Consensus       510 ~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~-----------~  577 (679)
                      .....  .....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||...+..+  .+.....           .
T Consensus       174 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~--~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         174 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CTTSC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHH
T ss_pred             cCCcc--cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH--HHHHHHHHhCCChHHhhhh
Confidence            54332  233468999999998765 578999999999999999999999997443221  1111111           0


Q ss_pred             hHh---cCCeeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhh
Q 005750          578 MIK---KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDSI  633 (679)
Q Consensus       578 ~~~---~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~  633 (679)
                      ...   .......................+.+|+.+||+.||++|||++|+++.  ++++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            000   000000000000001112233468899999999999999999999863  55543


No 53 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-41  Score=358.37  Aligned_cols=261  Identities=21%  Similarity=0.294  Sum_probs=193.9

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc-chhHHHHHHHHHHHHhccCCCcccccccccccc----eEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILV  431 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~~lV  431 (679)
                      .|++.++||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|++++||||+++++++....    ..+++
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            3667899999999999999875 79999999997543 344568899999999999999999999986543    23455


Q ss_pred             EEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccccc
Q 005750          432 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE  511 (679)
Q Consensus       432 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~  511 (679)
                      ++++.+|+|.+++..    ..+++..++.++.|++.||+|||+   +||+||||||+|||++.++.+||+|||++.....
T Consensus        89 ~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          89 VTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            566779999999963    469999999999999999999999   9999999999999999999999999999987544


Q ss_pred             Cccc--ccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeee--
Q 005750          512 DLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS--  586 (679)
Q Consensus       512 ~~~~--~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--  586 (679)
                      ....  ......||+.|+|||++.. ..++.++||||+||++|+|++|+.||...+..+......   ..........  
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~  238 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL---GILGSPSQEDLN  238 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HHHCSCCHHHHH
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh---hhccCCChhhhh
Confidence            3222  2344568999999999854 567899999999999999999999997443322111111   0000000000  


Q ss_pred             ---------eeccc-ccCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750          587 ---------IVDPV-LIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA  628 (679)
Q Consensus       587 ---------~~d~~-l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  628 (679)
                               ..... .....+     .....++.+++.+||+.||.+|||++|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     00000 000000     0112368899999999999999999999874


No 54 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1.9e-41  Score=349.93  Aligned_cols=261  Identities=16%  Similarity=0.195  Sum_probs=208.6

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccC-CCcccccccccccceEEEEEEec
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM  435 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lV~E~~  435 (679)
                      .|++.+.||+|+||+||+|++. +|+.||||++....  ....+.+|++.++.++| +|++.+++++..+...++||||+
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            4678899999999999999976 68999999986532  23457789999999965 89999999999999999999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccC-----CCcEEEeeccCccccc
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAE  510 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kL~Dfgla~~~~  510 (679)
                       +++|.+++..  ....+++.++..++.|++.||+|||+   +||+||||||+|||++.     ++.+||+|||+|+...
T Consensus        84 -~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          84 -GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             -CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             -CCCHHHHHHh--hccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence             7899998864  34579999999999999999999999   99999999999999964     5789999999998765


Q ss_pred             cCccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCe
Q 005750          511 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV  584 (679)
Q Consensus       511 ~~~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  584 (679)
                      .....      ......||+.|+|||++.+..+++++|||||||++|||+||+.||.+............+.........
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  237 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh
Confidence            43221      123456999999999999999999999999999999999999999855544333222222221111111


Q ss_pred             eeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          585 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       585 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .     .+....    +.++.+++..|++.+|++||+++.+.+.|+++...
T Consensus       238 ~-----~l~~~~----p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~  279 (293)
T d1csna_         238 R-----ELCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  279 (293)
T ss_dssp             H-----HHTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             H-----HhcCCC----CHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence            1     111122    34688999999999999999999999999988754


No 55 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.2e-42  Score=363.03  Aligned_cols=264  Identities=22%  Similarity=0.306  Sum_probs=194.8

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccc------eE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR  428 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------~~  428 (679)
                      .|++.++||+|+||+||+|.+. +|+.||||+++...  ....+.+.+|+++|++++|||||+++++|...+      +.
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence            5777899999999999999976 69999999997542  334567899999999999999999999987654      57


Q ss_pred             EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750          429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ  508 (679)
Q Consensus       429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~  508 (679)
                      ++||||+ +++|..+.+    ...+++..++.++.||+.||+|||+   +||+||||||+|||++.++.+|++|||+|+.
T Consensus        99 ~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             EEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEecc-cccHHHHHH----hccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccceec
Confidence            9999999 677887765    3569999999999999999999999   9999999999999999999999999999987


Q ss_pred             cccCcccccccccCCccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh-----HhcC
Q 005750          509 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-----IKKG  582 (679)
Q Consensus       509 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~-----~~~~  582 (679)
                      .....    ....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..............     +...
T Consensus       171 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (346)
T d1cm8a_         171 ADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL  246 (346)
T ss_dssp             CCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred             cCCcc----ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhh
Confidence            65432    33468999999999865 46789999999999999999999999754322111111000000     0000


Q ss_pred             C----------eeeeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HHhhhh
Q 005750          583 D----------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDSIK  634 (679)
Q Consensus       583 ~----------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~~  634 (679)
                      .          ........+ ..........+.+|+.+||+.||.+|||++|+++.  ++++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         247 QSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             SCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             cchhhhhhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence            0          000000000 00111122367899999999999999999999984  665543


No 56 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4e-41  Score=348.89  Aligned_cols=260  Identities=22%  Similarity=0.290  Sum_probs=198.6

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccc-cccccccceEEEEEEec
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPL-IGYCEEEHQRILVYEYM  435 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l-~~~~~~~~~~~lV~E~~  435 (679)
                      +|++.+.||+|+||.||+|++. +|+.||||++....  ...++..|+++++.++|+|++.. .+++.+.+..++||||+
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            4778899999999999999875 68999999986543  23457889999999987765555 55557778889999999


Q ss_pred             CCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccc---CCCcEEEeeccCccccccC
Q 005750          436 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQAEED  512 (679)
Q Consensus       436 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfgla~~~~~~  512 (679)
                       ++++.+.+..  ....+++..+..++.|++.||+|||+   ++|+||||||+|||++   .+..+||+|||+|+.....
T Consensus        86 -~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          86 -GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             -CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             -CCchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence             5566665543  35679999999999999999999999   9999999999999875   4567999999999886543


Q ss_pred             ccc------ccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHH-HHHHHhHhcCCee
Q 005750          513 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV-HWARSMIKKGDVI  585 (679)
Q Consensus       513 ~~~------~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~  585 (679)
                      ...      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||............ ........ ... 
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~-  237 (299)
T d1ckia_         160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI-  237 (299)
T ss_dssp             TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH-SCH-
T ss_pred             ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCC-CCh-
Confidence            321      223456999999999999999999999999999999999999999754433222111 11111111 000 


Q ss_pred             eeecccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          586 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       586 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                          +.+...    .+.++.+++.+||+.+|++||+++++.+.|+++...
T Consensus       238 ----~~~~~~----~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         238 ----EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             ----HHHTTT----SCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----hHhccC----CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                111111    234688999999999999999999999999987654


No 57 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-41  Score=348.31  Aligned_cols=261  Identities=20%  Similarity=0.252  Sum_probs=202.8

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccccceEEEEEEe
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY  434 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~  434 (679)
                      .|++.++||+|+||+||+|++. +++.||||+++...  .....++.+|+.+++.++||||+++++++.+.+..++|+|+
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            3667899999999999999975 78999999986443  34467899999999999999999999999999999999999


Q ss_pred             cCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccccccCcc
Q 005750          435 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT  514 (679)
Q Consensus       435 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~~~~~~  514 (679)
                      +.++++..++.   ..+.+++..++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||.++.......
T Consensus        83 ~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          83 CDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             CSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred             ccccccccccc---cccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence            99999988876   45678999999999999999999999   9999999999999999999999999999987654433


Q ss_pred             cccccccCCccccCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCC---ee---ee
Q 005750          515 HISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VI---SI  587 (679)
Q Consensus       515 ~~~~~~~gt~~y~aPE~l~~~~-~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~---~~  587 (679)
                      . .....+++.|+|||.+.+.. ++.++||||+||++|||++|+.||.....  .......+........   ..   ..
T Consensus       157 ~-~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         157 C-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             C-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             c-ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC--HHHHHHHHHhhcCCCChhhhhhhhhc
Confidence            2 22334778999999987654 68999999999999999999999752221  1112222221111100   00   00


Q ss_pred             ec---------ccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          588 VD---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       588 ~d---------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .+         ..-...........+.+|+.+||+.||.+|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00         00000111222346789999999999999999999976


No 58 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.6e-42  Score=357.31  Aligned_cols=250  Identities=26%  Similarity=0.356  Sum_probs=201.5

Q ss_pred             HhhccccCcCccEEEEEEEEc----CCcEEEEEEecCCc----chhHHHHHHHHHHHHhccC-CCcccccccccccceEE
Q 005750          359 NNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRI  429 (679)
Q Consensus       359 ~~~~~~LG~G~~g~Vy~a~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~  429 (679)
                      |++.+.||+|+||+||+|+..    +|+.||||+++...    ....+.+.+|++++++++| |||+++++++.+....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            788999999999999999762    48899999986432    2335678899999999976 89999999999999999


Q ss_pred             EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      ++|||+.+|+|.+++..   ...+++..+..++.||+.||+|||+   ++|+||||||+||+++.++.+||+|||++...
T Consensus       106 ~v~e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eeeecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            99999999999999974   4567889999999999999999999   99999999999999999999999999999876


Q ss_pred             ccCcccccccccCCccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeee
Q 005750          510 EEDLTHISSVARGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI  587 (679)
Q Consensus       510 ~~~~~~~~~~~~gt~~y~aPE~l~~~--~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (679)
                      ............|++.|+|||.+.+.  .++.++|||||||+||+|++|+.||..........  ......... .    
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~--~i~~~~~~~-~----  252 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA--EISRRILKS-E----  252 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH--HHHHHHHHC-C----
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcccC-C----
Confidence            55544444556799999999998654  46889999999999999999999997554332211  111111111 1    


Q ss_pred             ecccccCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 005750          588 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL  627 (679)
Q Consensus       588 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~  627 (679)
                        +    ..+......+.+++.+||++||++|||     ++|+++
T Consensus       253 --~----~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         253 --P----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             --C----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             --C----CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence              0    111223457889999999999999994     788875


No 59 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=6.6e-41  Score=351.89  Aligned_cols=256  Identities=20%  Similarity=0.291  Sum_probs=195.1

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccc--cceEEEEEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVYE  433 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~--~~~~~lV~E  433 (679)
                      .|++.++||+|+||+||+|++. +|+.||||+++..   ..+++.+|+++|++++ ||||+++++++..  ....++|||
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            5788999999999999999985 6999999998754   3467889999999995 9999999999864  457899999


Q ss_pred             ecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC-cEEEeeccCccccccC
Q 005750          434 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEED  512 (679)
Q Consensus       434 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfgla~~~~~~  512 (679)
                      |+.+++|..+.      +.+++..++.++.||+.||+|||+   +||+||||||+|||++.++ .+||+|||+|......
T Consensus       113 ~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         113 HVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             CCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             ecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999997754      358999999999999999999999   9999999999999998654 6999999999876543


Q ss_pred             cccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchh--hHHHHH-----HHhHhcCCe
Q 005750          513 LTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL--NIVHWA-----RSMIKKGDV  584 (679)
Q Consensus       513 ~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~--~~~~~~-----~~~~~~~~~  584 (679)
                      ..  .....+|+.|+|||.+.+. .++.++||||+||++|+|++|+.||.........  .+....     .........
T Consensus       184 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~  261 (328)
T d3bqca1         184 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  261 (328)
T ss_dssp             CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             Cc--ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence            22  2344689999999998765 5799999999999999999999999743322111  011000     000000000


Q ss_pred             e------eee--------cccccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005750          585 I------SIV--------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL  627 (679)
Q Consensus       585 ~------~~~--------d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  627 (679)
                      .      ...        ..............++.+|+.+||+.||.+|||++|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0      000        000011111122346889999999999999999999986


No 60 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-40  Score=347.72  Aligned_cols=260  Identities=22%  Similarity=0.283  Sum_probs=188.9

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCccccccccc------ccceE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE------EEHQR  428 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~------~~~~~  428 (679)
                      .|++.++||+|+||+||+|++. +|+.||||++....  ....+.+.+|+.++++++||||++++++|.      .....
T Consensus        18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~   97 (355)
T d2b1pa1          18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV   97 (355)
T ss_dssp             TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence            3667899999999999999986 69999999997543  334567899999999999999999999985      34688


Q ss_pred             EEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750          429 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ  508 (679)
Q Consensus       429 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~  508 (679)
                      |+||||+.++.+. .+.     ..+++..++.++.||+.||+|||+   +||+||||||+|||++.++.+|++|||+++.
T Consensus        98 ~iv~Ey~~~~l~~-~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~  168 (355)
T d2b1pa1          98 YLVMELMDANLCQ-VIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART  168 (355)
T ss_dssp             EEEEECCSEEHHH-HHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEEEeccchHHHH-hhh-----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhc
Confidence            9999999765554 443     358999999999999999999999   9999999999999999999999999999876


Q ss_pred             cccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchhh-HHH--------------
Q 005750          509 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN-IVH--------------  573 (679)
Q Consensus       509 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~-~~~--------------  573 (679)
                      .....  ......+|+.|+|||++.+..+++++||||+||++|+|++|+.||.+.+...... +..              
T Consensus       169 ~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (355)
T d2b1pa1         169 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred             ccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence            54432  2234468999999999999999999999999999999999999997443221110 000              


Q ss_pred             -HHHHhHhcCC-e-----eeeecccccCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005750          574 -WARSMIKKGD-V-----ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA  628 (679)
Q Consensus       574 -~~~~~~~~~~-~-----~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  628 (679)
                       .......... .     ............   .......+.+|+.+||+.||++|||++|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence             0000011100 0     000000111111   12345578999999999999999999999864


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-40  Score=347.75  Aligned_cols=260  Identities=20%  Similarity=0.294  Sum_probs=194.5

Q ss_pred             HHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCc--chhHHHHHHHHHHHHhccCCCcccccccccc-----cceEE
Q 005750          358 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQRI  429 (679)
Q Consensus       358 ~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~~~~  429 (679)
                      +|++.++||+|+||+||+|++. +|+.||||++....  ....+.+.+|+++|++++||||+++++++..     +...+
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            4777899999999999999875 79999999997543  3345678899999999999999999998853     33446


Q ss_pred             EEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEeeccCcccc
Q 005750          430 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA  509 (679)
Q Consensus       430 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~~  509 (679)
                      ++++|+.+|+|.+++.    ...+++..++.++.||+.||+|||+   +||+||||||+|||++.++.+|++|||++...
T Consensus        99 ~i~~~~~gg~L~~~~~----~~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT  171 (348)
T ss_dssp             EEEEECCSEEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred             EEEEeecCCchhhhcc----cccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhccc
Confidence            6778888999999986    3569999999999999999999999   99999999999999999999999999999765


Q ss_pred             ccCcccccccccCCccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhHhcCCeeeee
Q 005750          510 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV  588 (679)
Q Consensus       510 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (679)
                      ...    .....|++.|+|||.+.+. .++.++||||+||++|+|++|+.||.+.+......   .+........ .+..
T Consensus       172 ~~~----~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~---~i~~~~~~~~-~~~~  243 (348)
T d2gfsa1         172 DDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK---LILRLVGTPG-AELL  243 (348)
T ss_dssp             TGG----GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCC-HHHH
T ss_pred             Ccc----cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCC-hHHh
Confidence            433    2334588999999987665 56899999999999999999999997543321111   1111100000 0000


Q ss_pred             -----------ccccc--CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHHhh
Q 005750          589 -----------DPVLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS  632 (679)
Q Consensus       589 -----------d~~l~--~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~  632 (679)
                                 ...+.  ....     ......+.+|+.+||+.||.+|||++|+++  .+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             TTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence                       00000  0000     112236789999999999999999999987  35543


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.7e-36  Score=322.49  Aligned_cols=284  Identities=20%  Similarity=0.270  Sum_probs=202.1

Q ss_pred             HHHhhccccCcCccEEEEEEEEc-CCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-----------CCCcccccccccc
Q 005750          357 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCEE  424 (679)
Q Consensus       357 ~~~~~~~~LG~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpnIv~l~~~~~~  424 (679)
                      .+|++.++||+|+||+||+|+.. +|+.||||+++... ...+.+.+|+++++.++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            34888999999999999999975 79999999997543 33467788999988875           5788999988754


Q ss_pred             --cceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCC------
Q 005750          425 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM------  496 (679)
Q Consensus       425 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~------  496 (679)
                        ....+++++++..+..............+++..+..++.||+.||+|||+  ..||+||||||+|||++.++      
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccc
Confidence              34566777776555433333333356778999999999999999999997  38899999999999998654      


Q ss_pred             cEEEeeccCccccccCcccccccccCCccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCcccccchh----hHH
Q 005750          497 RAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL----NIV  572 (679)
Q Consensus       497 ~~kL~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~s~ksDVwSlGvll~elltG~~pf~~~~~~~~~----~~~  572 (679)
                      .++++|||.+.......    ....||+.|+|||++.+..++.++||||+||++++|++|+.||...+.....    .+.
T Consensus       170 ~~kl~dfg~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeeEeeccccccccccc----ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            39999999987654322    3456899999999999999999999999999999999999999744332111    111


Q ss_pred             HHHHHh-------HhcCC----------eeeeeccc----------ccCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 005750          573 HWARSM-------IKKGD----------VISIVDPV----------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI  625 (679)
Q Consensus       573 ~~~~~~-------~~~~~----------~~~~~d~~----------l~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev  625 (679)
                      ..+...       .....          ....+...          ............+.+|+.+||+.||.+|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            111100       00000          00000000          0112345667789999999999999999999999


Q ss_pred             HHH--HHhhhhhhcCCCCccccCC
Q 005750          626 VLA--IQDSIKIEKGGDQKFSSSS  647 (679)
Q Consensus       626 l~~--L~~~~~~~~~~~~~~~~~~  647 (679)
                      ++.  +++....++...+...-++
T Consensus       326 L~Hp~f~~~~~~~~~~~p~~~~~~  349 (362)
T d1q8ya_         326 VNHPWLKDTLGMEEIRVPDRELYG  349 (362)
T ss_dssp             HTCGGGTTCTTCTTCCCTTSCTTC
T ss_pred             hcCcccCCCCCcccCCCCCcccCC
Confidence            984  7666655554444444333


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.85  E-value=1e-22  Score=195.12  Aligned_cols=162  Identities=15%  Similarity=0.165  Sum_probs=119.1

Q ss_pred             hccccCcCccEEEEEEEEcCCcEEEEEEecCCcc------------------hhHHHHHHHHHHHHhccCCCcccccccc
Q 005750          361 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC  422 (679)
Q Consensus       361 ~~~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~hpnIv~l~~~~  422 (679)
                      +.++||+|+||+||+|+..+|+.||||+++....                  .......+|...+.++.|++++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            5689999999999999998999999998753210                  1123355788999999999998887653


Q ss_pred             cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccCCCcEEEee
Q 005750          423 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD  502 (679)
Q Consensus       423 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D  502 (679)
                      .    .+++|||+++..+.++          +......++.|++++|+|||+   +||+||||||+|||++++ .++|+|
T Consensus        84 ~----~~lvme~~~~~~~~~l----------~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~liD  145 (191)
T d1zara2          84 G----NAVLMELIDAKELYRV----------RVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIWIID  145 (191)
T ss_dssp             T----TEEEEECCCCEEGGGC----------CCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEEECC
T ss_pred             C----CEEEEEeeccccccch----------hhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEEEEE
Confidence            2    3799999988665432          223356789999999999999   999999999999999865 589999


Q ss_pred             ccCccccccCcccccccccCCccccCC------cccCCCCCCchhHHHHHHHHH
Q 005750          503 FGLSRQAEEDLTHISSVARGTVGYLDP------EYYGNQQLTEKSDVYSFGVVL  550 (679)
Q Consensus       503 fgla~~~~~~~~~~~~~~~gt~~y~aP------E~l~~~~~s~ksDVwSlGvll  550 (679)
                      ||.|.....+...         .|...      +.+ ...|+.++|+||..--+
T Consensus       146 FG~a~~~~~~~~~---------~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         146 FPQSVEVGEEGWR---------EILERDVRNIITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CTTCEETTSTTHH---------HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             CCCcccCCCCCcH---------HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence            9999765433211         11110      111 24567788999976443


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.74  E-value=1.1e-18  Score=180.11  Aligned_cols=151  Identities=26%  Similarity=0.489  Sum_probs=128.4

Q ss_pred             CchhHHHHHHHHHhhcCC-CCCCCCC-CCCCCCCCCceEEEeCCC-CCceEEEEcCCCcccc--cCCccccCCCCCCEEE
Q 005750          117 TEWQDVMVLEALRSISDE-SERTNDR-GDPCVPVPWEWVTCSTTT-PPRITKIALSGKNLKG--EIPPELKNMEALTELW  191 (679)
Q Consensus       117 t~~~~~~~l~~l~~~~~~-~~~~~w~-~~~c~~~~w~~~~c~~~~-~~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~  191 (679)
                      ..++|..||.++|+.... ....+|. +..||.+.|.||+|+..+ ..||+.|+|++|+++|  .+|++|++|++|++|+
T Consensus         3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~   82 (313)
T d1ogqa_           3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY   82 (313)
T ss_dssp             SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred             CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccccccc
Confidence            568999999999997754 4456775 444556689999998653 4589999999999998  5899999999999999


Q ss_pred             CCC-CcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750          192 LDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL  267 (679)
Q Consensus       192 L~~-N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~  267 (679)
                      |++ |+|+|.+| +|++|++|++|+|++|+|.|..|..+..+.+|+.+++++|++.+.+|..+..  ....+.+++|...
T Consensus        83 Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~  162 (313)
T d1ogqa_          83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS  162 (313)
T ss_dssp             EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCE
T ss_pred             cccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccccccc
Confidence            996 89999988 5999999999999999999999999999999999999999999999988765  3455667777543


No 65 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.53  E-value=7.7e-15  Score=139.59  Aligned_cols=122  Identities=19%  Similarity=0.213  Sum_probs=104.5

Q ss_pred             CCCceEEEeCCC--------CCceEEEEcCCCcccccC-CccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecC
Q 005750          148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEI-PPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN  217 (679)
Q Consensus       148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~-p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~  217 (679)
                      |.|..|.|+...        +.+++.|+|++|.|++.+ +..|.++++|+.|+|++|.+.+.++ .+..+++|+.|+|++
T Consensus         8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_           8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            457778887432        457999999999998766 4568999999999999999999998 599999999999999


Q ss_pred             ccCCCCCCCCCCCCCccceecccccCCCCCCCccccC---CceeeeecCCCCcccc
Q 005750          218 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE  270 (679)
Q Consensus       218 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~~n~~~~~~  270 (679)
                      |+|++..|..|.++++|++|+|++|+|+ .+|+..+.   .+..+.+.+|++.|..
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~-~i~~~~f~~l~~L~~l~L~~N~~~~~~  142 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASNPFNCNC  142 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred             ccccccCHHHHhCCCcccccccCCcccc-ccCHHHhcCCccccccccccccccccc
Confidence            9999666778999999999999999999 77777654   4567889999999864


No 66 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36  E-value=7.2e-13  Score=121.16  Aligned_cols=103  Identities=18%  Similarity=0.192  Sum_probs=87.8

Q ss_pred             EEcCCCcccccCCccccCCCCCCEEECCCC-cCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccC
Q 005750          166 IALSGKNLKGEIPPELKNMEALTELWLDGN-FLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS  243 (679)
Q Consensus       166 L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N-~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~  243 (679)
                      ++++++++. .+|..+..+++|+.|+|++| .|+.+.+ +|.+|++|+.|+|++|+|+..-|..|..+++|+.|+|++|+
T Consensus        13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~   91 (156)
T d2ifga3          13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA   91 (156)
T ss_dssp             EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred             EEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence            455666666 67888999999999999866 5888777 59999999999999999995557779999999999999999


Q ss_pred             CCCCCCccccC--CceeeeecCCCCcccc
Q 005750          244 FVGEIPPALLT--GKVIFKYDNNPKLHKE  270 (679)
Q Consensus       244 l~g~ip~~~~~--~~~~~~~~~n~~~~~~  270 (679)
                      |+ .+|...+.  ....+.+++||+.|++
T Consensus        92 l~-~l~~~~~~~~~l~~L~L~~Np~~C~C  119 (156)
T d2ifga3          92 LE-SLSWKTVQGLSLQELVLSGNPLHCSC  119 (156)
T ss_dssp             CS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred             Cc-ccChhhhccccccccccCCCcccCCc
Confidence            99 89988776  3467889999999865


No 67 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.31  E-value=1.5e-12  Score=114.01  Aligned_cols=98  Identities=26%  Similarity=0.339  Sum_probs=76.2

Q ss_pred             EEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccCC
Q 005750          165 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSF  244 (679)
Q Consensus       165 ~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l  244 (679)
                      .|+|++|+|+ .++ .+..|++|++|+|++|+|+..+++++.+++|+.|+|++|+|+ .+| .++.+++|+.|++++|++
T Consensus         2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i   77 (124)
T d1dcea3           2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRL   77 (124)
T ss_dssp             EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCC
T ss_pred             EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccCcchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCcc
Confidence            5888899988 665 488888899999999998876667888888999999999888 566 488888899999999988


Q ss_pred             CCCCCc--ccc--CCceeeeecCCCCc
Q 005750          245 VGEIPP--ALL--TGKVIFKYDNNPKL  267 (679)
Q Consensus       245 ~g~ip~--~~~--~~~~~~~~~~n~~~  267 (679)
                      + .+|.  .+.  .....+.+.+|+..
T Consensus        78 ~-~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          78 Q-QSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             C-SSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             C-CCCCchhhcCCCCCCEEECCCCcCC
Confidence            8 5553  222  24456777888754


No 68 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30  E-value=4.6e-12  Score=126.48  Aligned_cols=111  Identities=28%  Similarity=0.330  Sum_probs=100.6

Q ss_pred             CCCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCcccee
Q 005750          159 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL  237 (679)
Q Consensus       159 ~~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L  237 (679)
                      ..++|+.|+|++|.+.+..+..+..+.+|+.|++++|.++..++. +..+++|+.|++++|+|++..|..|..+++|++|
T Consensus        98 ~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L  177 (266)
T d1p9ag_          98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL  177 (266)
T ss_dssp             TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred             cccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCcccccccccccee
Confidence            356899999999999977788899999999999999999999885 8899999999999999997777889999999999


Q ss_pred             cccccCCCCCCCccccC--CceeeeecCCCCcccc
Q 005750          238 HIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE  270 (679)
Q Consensus       238 ~l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~~  270 (679)
                      +|++|+|+ .||++++.  .+..+.+.+|||.|++
T Consensus       178 ~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC  211 (266)
T d1p9ag_         178 LLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC  211 (266)
T ss_dssp             ECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred             ecccCCCc-ccChhHCCCCCCCEEEecCCCCCCCc
Confidence            99999999 99998875  4577899999999975


No 69 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.30  E-value=3.4e-13  Score=138.17  Aligned_cols=109  Identities=26%  Similarity=0.307  Sum_probs=98.9

Q ss_pred             ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750          162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN  241 (679)
Q Consensus       162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~  241 (679)
                      ....++++++.+.|.+|..++.+++|+.|++++|.+++.+|+++.+++|+.|+|++|+|+|.+|.+|++|++|++|+|++
T Consensus       198 ~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~  277 (313)
T d1ogqa_         198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF  277 (313)
T ss_dssp             CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcC
Confidence            34579999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCccc-cCCceeeeecCCCCcccc
Q 005750          242 NSFVGEIPPAL-LTGKVIFKYDNNPKLHKE  270 (679)
Q Consensus       242 N~l~g~ip~~~-~~~~~~~~~~~n~~~~~~  270 (679)
                      |+|+|.||... ...+..+.+.+|+.+|+.
T Consensus       278 N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~  307 (313)
T d1ogqa_         278 NNLCGEIPQGGNLQRFDVSAYANNKCLCGS  307 (313)
T ss_dssp             SEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred             CcccccCCCcccCCCCCHHHhCCCccccCC
Confidence            99999999642 234566788999999874


No 70 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22  E-value=6.2e-12  Score=126.68  Aligned_cols=111  Identities=19%  Similarity=0.235  Sum_probs=97.4

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH  238 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~  238 (679)
                      ...|+.|++++|+|++..+..|..+++|+.|+|++|+|++.++ .|.++++|+.|++++|++++..|..|..+++|++|+
T Consensus       128 ~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~  207 (284)
T d1ozna_         128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY  207 (284)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred             hcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccc
Confidence            3589999999999996667789999999999999999999988 499999999999999999988899999999999999


Q ss_pred             ccccCCCCCCCccccC--CceeeeecCCCCcccc
Q 005750          239 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE  270 (679)
Q Consensus       239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~~~~  270 (679)
                      +++|++++..|..+..  .+..+.+++||+.|++
T Consensus       208 l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C  241 (284)
T d1ozna_         208 LFANNLSALPTEALAPLRALQYLRLNDNPWVCDC  241 (284)
T ss_dssp             CCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred             ccccccccccccccccccccCEEEecCCCCCCCc
Confidence            9999999544444332  4578899999999964


No 71 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.21  E-value=7.2e-12  Score=109.64  Aligned_cols=83  Identities=28%  Similarity=0.350  Sum_probs=76.3

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCC--CCCCCCCcccee
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLP--SYMGSLPNLQEL  237 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~L  237 (679)
                      ..+|+.|+|++|.|+ .+|+.++.+++|+.|+|++|.|++. |++.++++|+.|++++|+++ .+|  ..++.+++|+.|
T Consensus        19 l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~~~~L~~L   95 (124)
T d1dcea3          19 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLL   95 (124)
T ss_dssp             GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCC-SSSTTGGGGGCTTCCEE
T ss_pred             CCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-CccccccccCeEECCCCccC-CCCCchhhcCCCCCCEE
Confidence            358999999999999 7899999999999999999999976 67999999999999999999 555  468999999999


Q ss_pred             cccccCCC
Q 005750          238 HIENNSFV  245 (679)
Q Consensus       238 ~l~~N~l~  245 (679)
                      ++++|+++
T Consensus        96 ~l~~N~i~  103 (124)
T d1dcea3          96 NLQGNSLC  103 (124)
T ss_dssp             ECTTSGGG
T ss_pred             ECCCCcCC
Confidence            99999998


No 72 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18  E-value=1.2e-11  Score=113.64  Aligned_cols=104  Identities=22%  Similarity=0.266  Sum_probs=87.7

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCC-CCCCCccceec
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH  238 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~  238 (679)
                      +.++++|+|++|+|+ .+|..+..+++|+.|+|++|+|+.. +.|..+++|+.|+|++|+++ .+|.. +..+++|+.|+
T Consensus        17 ~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l-~~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~L~   93 (162)
T d1a9na_          17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELI   93 (162)
T ss_dssp             TTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEE
T ss_pred             cCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc-CCcccCcchhhhhccccccc-CCCccccccccccccce
Confidence            358999999999999 6787778899999999999999965 77999999999999999999 66655 56799999999


Q ss_pred             ccccCCCCCCCc--cc--cCCceeeeecCCCCc
Q 005750          239 IENNSFVGEIPP--AL--LTGKVIFKYDNNPKL  267 (679)
Q Consensus       239 l~~N~l~g~ip~--~~--~~~~~~~~~~~n~~~  267 (679)
                      |++|+++ .+++  .+  ...+..+.+.+||..
T Consensus        94 L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          94 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT  125 (162)
T ss_dssp             CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred             ecccccc-ccccccccccccccchhhcCCCccc
Confidence            9999998 6664  22  235577888888753


No 73 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.17  E-value=1.4e-11  Score=116.51  Aligned_cols=90  Identities=22%  Similarity=0.353  Sum_probs=83.0

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH  238 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~  238 (679)
                      .++|+.|+|++|++.+..+..+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|+.|..+++|++|+
T Consensus        53 l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~  132 (192)
T d1w8aa_          53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN  132 (192)
T ss_dssp             CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred             CceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccc
Confidence            46899999999999988899999999999999999999999985 99999999999999999976777899999999999


Q ss_pred             ccccCCCCCCC
Q 005750          239 IENNSFVGEIP  249 (679)
Q Consensus       239 l~~N~l~g~ip  249 (679)
                      |++|.+.+..+
T Consensus       133 L~~N~~~~~~~  143 (192)
T d1w8aa_         133 LASNPFNCNCH  143 (192)
T ss_dssp             CTTCCBCCSGG
T ss_pred             ccccccccccc
Confidence            99999985443


No 74 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.11  E-value=6.8e-11  Score=120.07  Aligned_cols=108  Identities=23%  Similarity=0.290  Sum_probs=97.2

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH  238 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~  238 (679)
                      .++++.|+|++|.+++..+..|.+++.++.|++++|.+++..+ .+.++++|+.|+|++|+|+ .+|.++..+++|++|+
T Consensus       170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~  248 (305)
T d1xkua_         170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY  248 (305)
T ss_dssp             CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred             CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEE
Confidence            4689999999999999999999999999999999999999988 4899999999999999999 8999999999999999


Q ss_pred             ccccCCCCCCCccccC---------CceeeeecCCCCccc
Q 005750          239 IENNSFVGEIPPALLT---------GKVIFKYDNNPKLHK  269 (679)
Q Consensus       239 l~~N~l~g~ip~~~~~---------~~~~~~~~~n~~~~~  269 (679)
                      |++|+|+ .|+...+.         .+..+.+.+||+.+.
T Consensus       249 Ls~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~  287 (305)
T d1xkua_         249 LHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW  287 (305)
T ss_dssp             CCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred             CCCCccC-ccChhhccCcchhcccCCCCEEECCCCcCccC
Confidence            9999999 88876543         235678899998763


No 75 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00  E-value=2.2e-10  Score=104.20  Aligned_cols=102  Identities=23%  Similarity=0.241  Sum_probs=87.3

Q ss_pred             CCCCCCCCceEEEeCC----------CCCceEEEEcCCCc-ccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCC
Q 005750          143 DPCVPVPWEWVTCSTT----------TPPRITKIALSGKN-LKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDL  210 (679)
Q Consensus       143 ~~c~~~~w~~~~c~~~----------~~~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L  210 (679)
                      +.|+++.++++.|+..          ..++|+.|+|++|+ |+..-+..|.+|++|+.|+|++|+|+.+.|. |.++++|
T Consensus         3 ~~C~c~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L   82 (156)
T d2ifga3           3 DACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL   82 (156)
T ss_dssp             SSSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCC
T ss_pred             CCCCcCCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccc
Confidence            5687778889999753          23578999998775 8855556799999999999999999999885 9999999


Q ss_pred             cEEEecCccCCCCCCCCCCCCCccceecccccCCC
Q 005750          211 RIVHLENNELTGSLPSYMGSLPNLQELHIENNSFV  245 (679)
Q Consensus       211 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~  245 (679)
                      +.|+|++|+|+ .+|..+....+|+.|+|++|.+.
T Consensus        83 ~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~  116 (156)
T d2ifga3          83 SRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH  116 (156)
T ss_dssp             CEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred             cceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence            99999999999 88887666668999999999985


No 76 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98  E-value=4.1e-10  Score=111.99  Aligned_cols=102  Identities=29%  Similarity=0.262  Sum_probs=81.2

Q ss_pred             CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750          161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE  240 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~  240 (679)
                      ++++.|+|++|+|++..+..|.++++|+.|+|++|+|+. +|.++.+++|+.|+|++|+++ .+|..+..+++|+.|+++
T Consensus        31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~  108 (266)
T d1p9ag_          31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS  108 (266)
T ss_dssp             TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred             cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccc
Confidence            578999999999996666779999999999999999985 456788999999999999998 667888899999999999


Q ss_pred             ccCCCCCCCccccCC---ceeeeecCCC
Q 005750          241 NNSFVGEIPPALLTG---KVIFKYDNNP  265 (679)
Q Consensus       241 ~N~l~g~ip~~~~~~---~~~~~~~~n~  265 (679)
                      +|.+. .++...+..   ...+.+++|.
T Consensus       109 ~~~~~-~~~~~~~~~l~~l~~L~l~~n~  135 (266)
T d1p9ag_         109 FNRLT-SLPLGALRGLGELQELYLKGNE  135 (266)
T ss_dssp             SSCCC-CCCSSTTTTCTTCCEEECTTSC
T ss_pred             ccccc-eeeccccccccccccccccccc
Confidence            99988 566554432   2445555553


No 77 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88  E-value=3.7e-10  Score=103.38  Aligned_cols=86  Identities=22%  Similarity=0.242  Sum_probs=76.6

Q ss_pred             CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCC--CCCCCCcccee
Q 005750          161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQEL  237 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L  237 (679)
                      .+|+.|+|++|.|+ .++ .|..|++|+.|+|++|+|+..++. +..+++|+.|+|++|+++ .+++  .+..+++|++|
T Consensus        41 ~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~-~~~~l~~l~~l~~L~~L  117 (162)
T d1a9na_          41 DQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL  117 (162)
T ss_dssp             TCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred             ccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccceecccccc-ccccccccccccccchh
Confidence            58999999999999 564 589999999999999999998887 678999999999999998 6664  68899999999


Q ss_pred             cccccCCCCCCCc
Q 005750          238 HIENNSFVGEIPP  250 (679)
Q Consensus       238 ~l~~N~l~g~ip~  250 (679)
                      ++++|.++ ..|.
T Consensus       118 ~l~~N~i~-~~~~  129 (162)
T d1a9na_         118 CILRNPVT-NKKH  129 (162)
T ss_dssp             ECCSSGGG-GSTT
T ss_pred             hcCCCccc-cccc
Confidence            99999998 6664


No 78 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.82  E-value=4.1e-09  Score=106.58  Aligned_cols=97  Identities=23%  Similarity=0.304  Sum_probs=61.7

Q ss_pred             EEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccccC
Q 005750          165 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS  243 (679)
Q Consensus       165 ~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~  243 (679)
                      .++.++++|+ .+|..+.  ++|++|+|++|+|+..++ +|.++++|+.|++++|.++...|..|..+++|+.|++++|+
T Consensus        14 ~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~   90 (305)
T d1xkua_          14 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ   90 (305)
T ss_dssp             EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred             EEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc
Confidence            3455556666 6666553  567777777777776666 46677777777777777775556666777777777777777


Q ss_pred             CCCCCCccccCCceeeeecCCC
Q 005750          244 FVGEIPPALLTGKVIFKYDNNP  265 (679)
Q Consensus       244 l~g~ip~~~~~~~~~~~~~~n~  265 (679)
                      ++ .+|...+.....+....|.
T Consensus        91 l~-~l~~~~~~~l~~L~~~~n~  111 (305)
T d1xkua_          91 LK-ELPEKMPKTLQELRVHENE  111 (305)
T ss_dssp             CS-BCCSSCCTTCCEEECCSSC
T ss_pred             cC-cCccchhhhhhhhhccccc
Confidence            76 6666655554445444444


No 79 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79  E-value=7e-09  Score=103.77  Aligned_cols=108  Identities=20%  Similarity=0.204  Sum_probs=93.4

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCC-CCCCCCCcEEEecCccCCCCCCCCCCCCCccceec
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH  238 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~  238 (679)
                      .++|+.|+|++|++.+..+..+..+++|+.+++++|+|+++++. |.++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus       104 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~  183 (284)
T d1ozna_         104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL  183 (284)
T ss_dssp             CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred             cccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence            46899999999999977778899999999999999999998884 89999999999999999977778899999999999


Q ss_pred             ccccCCCCCCCccccC--CceeeeecCCCCc
Q 005750          239 IENNSFVGEIPPALLT--GKVIFKYDNNPKL  267 (679)
Q Consensus       239 l~~N~l~g~ip~~~~~--~~~~~~~~~n~~~  267 (679)
                      +++|++++..|..+..  ....+.+++|...
T Consensus       184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~  214 (284)
T d1ozna_         184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLS  214 (284)
T ss_dssp             CCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred             hhhccccccChhHhhhhhhcccccccccccc
Confidence            9999999666666543  4466777777654


No 80 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.68  E-value=1.7e-08  Score=95.38  Aligned_cols=100  Identities=23%  Similarity=0.331  Sum_probs=60.5

Q ss_pred             CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750          161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE  240 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~  240 (679)
                      .+++.|+|++|+++ .++ .+..|++|++|+|++|+|++..| ++++++|+.|++++|.+. .+|. ++.+++|+.|+++
T Consensus        40 ~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~-~~~~-l~~l~~L~~L~l~  114 (199)
T d2omxa2          40 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLTLF  114 (199)
T ss_dssp             TTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CCGG-GTTCTTCSEEECC
T ss_pred             cCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCccc-ccCCcccccccccccccc-cccc-ccccccccccccc
Confidence            36667777777766 343 36667777777777777766544 667777777777777766 4443 6667777777777


Q ss_pred             ccCCCCCCCccccCCceeeeecCCC
Q 005750          241 NNSFVGEIPPALLTGKVIFKYDNNP  265 (679)
Q Consensus       241 ~N~l~g~ip~~~~~~~~~~~~~~n~  265 (679)
                      +|.+....+-.-+.....+.+++|.
T Consensus       115 ~~~~~~~~~~~~l~~L~~L~l~~n~  139 (199)
T d2omxa2         115 NNQITDIDPLKNLTNLNRLELSSNT  139 (199)
T ss_dssp             SSCCCCCGGGTTCTTCSEEECCSSC
T ss_pred             ccccccccccchhhhhHHhhhhhhh
Confidence            7766632221222334445555553


No 81 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.62  E-value=2.5e-10  Score=108.30  Aligned_cols=103  Identities=25%  Similarity=0.233  Sum_probs=83.6

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      ..+|+.|+|++|+|+ .++ .|..|++|+.|+|++|.|+...+.+..+++|+.|++++|+++ .++ .+..+++|+.|+|
T Consensus        47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~L  122 (198)
T d1m9la_          47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYM  122 (198)
T ss_dssp             TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECC-CHH-HHHHHHHSSEEEE
T ss_pred             ccccceeECcccCCC-Ccc-cccCCccccChhhccccccccccccccccccccccccccccc-ccc-ccccccccccccc
Confidence            568999999999999 665 599999999999999999875444556678999999999999 554 4788999999999


Q ss_pred             cccCCCCCCCc--cc--cCCceeeeecCCCCc
Q 005750          240 ENNSFVGEIPP--AL--LTGKVIFKYDNNPKL  267 (679)
Q Consensus       240 ~~N~l~g~ip~--~~--~~~~~~~~~~~n~~~  267 (679)
                      ++|+++ .++.  .+  ...+..+.+.+||..
T Consensus       123 ~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~  153 (198)
T d1m9la_         123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPLY  153 (198)
T ss_dssp             SEEECC-CHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred             ccchhc-cccccccccCCCccceeecCCCccc
Confidence            999998 5653  22  235677888998744


No 82 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.61  E-value=1.1e-08  Score=106.30  Aligned_cols=100  Identities=22%  Similarity=0.267  Sum_probs=69.7

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      ...+..++++.|.+++  ...+..+++|+.|+|++|+|++.. .+..+++|+.|+|++|+|+ .+| .+++|++|++|++
T Consensus       284 ~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l  358 (384)
T d2omza2         284 LTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSA  358 (384)
T ss_dssp             CTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEEC
T ss_pred             cccccccccccccccc--ccccchhcccCeEECCCCCCCCCc-ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEEC
Confidence            3466778888888874  345777888888888888888764 4777888888888888887 455 5778888888888


Q ss_pred             cccCCCCCCCccccCCceeeeecCC
Q 005750          240 ENNSFVGEIPPALLTGKVIFKYDNN  264 (679)
Q Consensus       240 ~~N~l~g~ip~~~~~~~~~~~~~~n  264 (679)
                      ++|+|++-.|-.-+..+..+.+++|
T Consensus       359 ~~N~l~~l~~l~~l~~L~~L~L~~N  383 (384)
T d2omza2         359 GHNQISDLTPLANLTRITQLGLNDQ  383 (384)
T ss_dssp             CSSCCCBCGGGTTCTTCSEEECCCE
T ss_pred             CCCcCCCChhhccCCCCCEeeCCCC
Confidence            8888884333121224445555544


No 83 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.56  E-value=5.3e-08  Score=92.62  Aligned_cols=82  Identities=26%  Similarity=0.465  Sum_probs=58.2

Q ss_pred             ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750          162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN  241 (679)
Q Consensus       162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~  241 (679)
                      +|+.|++++|.++. ++ .+..|++|+.|+|++|+|++.. .+++|++|+.|+|++|+++ .+| .+..+++|+.|++++
T Consensus        47 ~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~  121 (210)
T d1h6ta2          47 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEH  121 (210)
T ss_dssp             TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECTT
T ss_pred             CccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc-ccccCcccccccccccccc-ccc-ccccccccccccccc
Confidence            57777777777773 33 3677777778888877777643 4667777778888777777 455 467777777777777


Q ss_pred             cCCCCCCC
Q 005750          242 NSFVGEIP  249 (679)
Q Consensus       242 N~l~g~ip  249 (679)
                      |.+. .++
T Consensus       122 ~~~~-~~~  128 (210)
T d1h6ta2         122 NGIS-DIN  128 (210)
T ss_dssp             SCCC-CCG
T ss_pred             cccc-ccc
Confidence            7776 444


No 84 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.53  E-value=4.7e-08  Score=94.88  Aligned_cols=102  Identities=21%  Similarity=0.261  Sum_probs=83.6

Q ss_pred             CCCceEEEeCCC--------CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCC--CCCCCCCCcEEEecC
Q 005750          148 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLEN  217 (679)
Q Consensus       148 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~l~~  217 (679)
                      |....+.|+...        +.+++.|+|++|+|+...+..|.++++|++|+|++|.+...+|  .|.++++++.|.+..
T Consensus         8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~   87 (242)
T d1xwdc1           8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK   87 (242)
T ss_dssp             ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred             CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence            455678887532        2479999999999994444578999999999999999988765  489999999999865


Q ss_pred             -ccCCCCCCCCCCCCCccceecccccCCCCCCCc
Q 005750          218 -NELTGSLPSYMGSLPNLQELHIENNSFVGEIPP  250 (679)
Q Consensus       218 -N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~  250 (679)
                       |++....|..|..+++|+.|++++|.+. .+|.
T Consensus        88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~-~~~~  120 (242)
T d1xwdc1          88 ANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPD  120 (242)
T ss_dssp             CTTCCEECTTSEECCTTCCEEEEESCCCC-SCCC
T ss_pred             cccccccccccccccccccccccchhhhc-cccc
Confidence             7888677778999999999999999998 4544


No 85 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.53  E-value=5.9e-08  Score=92.34  Aligned_cols=101  Identities=29%  Similarity=0.416  Sum_probs=73.8

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      .++|+.|+|++|++++ ++ .+++|++|+.|+|++|+|++ +|.+.++++|+.|++++|.+. .++ .+..+++|+.+++
T Consensus        67 l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~l~~~~~~-~~~-~l~~l~~l~~l~~  141 (210)
T d1h6ta2          67 LPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYL  141 (210)
T ss_dssp             CTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEEC
T ss_pred             CCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-ccccccccccccccccccccc-ccc-ccccccccccccc
Confidence            4688999999999985 44 37889999999999999887 456888889999999998887 444 4777788888888


Q ss_pred             cccCCCCCCCccccCCceeeeecCCC
Q 005750          240 ENNSFVGEIPPALLTGKVIFKYDNNP  265 (679)
Q Consensus       240 ~~N~l~g~ip~~~~~~~~~~~~~~n~  265 (679)
                      ++|.+++..+..-...+..+.+++|.
T Consensus       142 ~~n~l~~~~~~~~l~~L~~l~l~~n~  167 (210)
T d1h6ta2         142 GNNKITDITVLSRLTKLDTLSLEDNQ  167 (210)
T ss_dssp             CSSCCCCCGGGGGCTTCSEEECCSSC
T ss_pred             cccccccccccccccccccccccccc
Confidence            88887732222223344555566554


No 86 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.50  E-value=4.1e-08  Score=94.56  Aligned_cols=79  Identities=20%  Similarity=0.362  Sum_probs=37.7

Q ss_pred             ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750          162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN  241 (679)
Q Consensus       162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~  241 (679)
                      .+..+.++++.+....  .+.++++|+.|++++|.++... .++++++|+.|+|++|+++ .+|. ++++++|++|+|++
T Consensus       130 ~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n~l~-~l~~-l~~l~~L~~L~Ls~  204 (227)
T d1h6ua2         130 NLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKN  204 (227)
T ss_dssp             TCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECTT
T ss_pred             chhhhhchhhhhchhh--hhccccccccccccccccccch-hhcccccceecccCCCccC-CChh-hcCCCCCCEEECcC
Confidence            4444455554444221  2444455555555555544322 2445555555555555555 2332 44555555555555


Q ss_pred             cCCC
Q 005750          242 NSFV  245 (679)
Q Consensus       242 N~l~  245 (679)
                      |+++
T Consensus       205 N~lt  208 (227)
T d1h6ua2         205 NQIS  208 (227)
T ss_dssp             SCCC
T ss_pred             CcCC
Confidence            5555


No 87 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.50  E-value=5.3e-08  Score=100.98  Aligned_cols=98  Identities=24%  Similarity=0.341  Sum_probs=57.1

Q ss_pred             CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceeccc
Q 005750          161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE  240 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~  240 (679)
                      ++|+.|++++|.+++..  .+..++.++.++++.|.+++ ++.+..+++|+.|+|++|++++. + .+..+++|+.|+++
T Consensus       263 ~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~~~~~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~  337 (384)
T d2omza2         263 TKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED-ISPISNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFA  337 (384)
T ss_dssp             TTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC-CGGGGGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECC
T ss_pred             ccCCEeeccCcccCCCC--cccccccccccccccccccc-ccccchhcccCeEECCCCCCCCC-c-ccccCCCCCEEECC
Confidence            45666666666666332  25566666666666666665 23466666666666666666643 2 25666666666666


Q ss_pred             ccCCCCCCCccccC--CceeeeecCCC
Q 005750          241 NNSFVGEIPPALLT--GKVIFKYDNNP  265 (679)
Q Consensus       241 ~N~l~g~ip~~~~~--~~~~~~~~~n~  265 (679)
                      +|+|+ .+| .+..  .+..+.+++|.
T Consensus       338 ~n~l~-~l~-~l~~l~~L~~L~l~~N~  362 (384)
T d2omza2         338 NNKVS-DVS-SLANLTNINWLSAGHNQ  362 (384)
T ss_dssp             SSCCC-CCG-GGGGCTTCCEEECCSSC
T ss_pred             CCCCC-CCh-hHcCCCCCCEEECCCCc
Confidence            66666 444 2222  33455555554


No 88 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.46  E-value=1.4e-07  Score=88.83  Aligned_cols=99  Identities=26%  Similarity=0.429  Sum_probs=70.5

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      .++|+.|+|++|++++ +++ +++|++|+.|++++|.+.... .+.++++|+.|++++|.+.. ++ .+..+++|+.|++
T Consensus        61 l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~~~~~~-~~-~~~~l~~L~~L~l  135 (199)
T d2omxa2          61 LNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADIT-PLANLTNLTGLTLFNNQITD-ID-PLKNLTNLNRLEL  135 (199)
T ss_dssp             CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred             CCCcCcCccccccccC-ccc-ccCCccccccccccccccccc-cccccccccccccccccccc-cc-ccchhhhhHHhhh
Confidence            3578889999888885 333 888888999999888877643 47788888888888888773 32 3677888888888


Q ss_pred             cccCCCCCCCcc-ccCCceeeeecCC
Q 005750          240 ENNSFVGEIPPA-LLTGKVIFKYDNN  264 (679)
Q Consensus       240 ~~N~l~g~ip~~-~~~~~~~~~~~~n  264 (679)
                      ++|++. .+|.- -......+.+.+|
T Consensus       136 ~~n~l~-~~~~l~~~~~L~~L~l~~n  160 (199)
T d2omxa2         136 SSNTIS-DISALSGLTSLQQLNFSSN  160 (199)
T ss_dssp             CSSCCC-CCGGGTTCTTCSEEECCSS
T ss_pred             hhhhhc-ccccccccccccccccccc
Confidence            888887 55531 1223344555554


No 89 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.35  E-value=2.7e-07  Score=88.55  Aligned_cols=77  Identities=22%  Similarity=0.341  Sum_probs=67.1

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      .++|+.|++++|.+.+..  .++++++|+.|+|++|++++. |.+.++++|+.|+|++|+++ .+|. ++++++|+.|+|
T Consensus       150 ~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~l-~~l~~l~~L~~L~Ls~N~lt-~i~~-l~~l~~L~~L~l  224 (227)
T d1h6ua2         150 LTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISDI-SPLASLPNLIEVHLKNNQIS-DVSP-LANTSNLFIVTL  224 (227)
T ss_dssp             CTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECTTSCCC-BCGG-GTTCTTCCEEEE
T ss_pred             ccccccccccccccccch--hhcccccceecccCCCccCCC-hhhcCCCCCCEEECcCCcCC-CCcc-cccCCCCCEEEe
Confidence            468999999999998433  389999999999999999874 56999999999999999999 5663 889999999999


Q ss_pred             cc
Q 005750          240 EN  241 (679)
Q Consensus       240 ~~  241 (679)
                      ++
T Consensus       225 sn  226 (227)
T d1h6ua2         225 TN  226 (227)
T ss_dssp             EE
T ss_pred             eC
Confidence            74


No 90 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.32  E-value=3.2e-09  Score=100.43  Aligned_cols=83  Identities=22%  Similarity=0.421  Sum_probs=73.6

Q ss_pred             CceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCC--CCCCCCCccceec
Q 005750          161 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLP--SYMGSLPNLQELH  238 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~L~  238 (679)
                      .+|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|+.. +.+.++++|+.|+|++|+++ .++  ..+..+++|+.|+
T Consensus        70 ~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l-~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~  146 (198)
T d1m9la_          70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLL  146 (198)
T ss_dssp             TTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH-HHHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEE
T ss_pred             ccccChhhcccccc-ccccccccccccccccccccccccc-ccccccccccccccccchhc-cccccccccCCCccceee
Confidence            58999999999998 7887777788999999999999974 56889999999999999998 555  4689999999999


Q ss_pred             ccccCCCC
Q 005750          239 IENNSFVG  246 (679)
Q Consensus       239 l~~N~l~g  246 (679)
                      |++|+++.
T Consensus       147 L~~N~l~~  154 (198)
T d1m9la_         147 LAGNPLYN  154 (198)
T ss_dssp             ECSSHHHH
T ss_pred             cCCCcccc
Confidence            99999873


No 91 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.31  E-value=4.6e-07  Score=88.75  Aligned_cols=137  Identities=14%  Similarity=0.092  Sum_probs=95.9

Q ss_pred             cccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEEecCCCcHh
Q 005750          363 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTLR  441 (679)
Q Consensus       363 ~~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~gsL~  441 (679)
                      +..+-++.+.||+...+ ++.+++|+...........+.+|...++.+. +-.+.+++.+...++..++||++++|.++.
T Consensus        20 ~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~   98 (263)
T d1j7la_          20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             ECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred             EcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence            33333444689998654 6667888876554444456778999988874 434677788888888899999999998886


Q ss_pred             hhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 005750          442 DRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC---------------------------------------------  476 (679)
Q Consensus       442 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~---------------------------------------------  476 (679)
                      +.....        .....++.++++.++.||+..                                             
T Consensus        99 ~~~~~~--------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (263)
T d1j7la_          99 EEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL  170 (263)
T ss_dssp             HHTTTC--------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHH
T ss_pred             cccccc--------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHH
Confidence            654311        112345667777777777510                                             


Q ss_pred             -----------CCCccccCCCCCCccccCCCcEEEeeccCccc
Q 005750          477 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ  508 (679)
Q Consensus       477 -----------~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~~  508 (679)
                                 ...++|+|+.|.||++++++..-|+||+.+..
T Consensus       171 ~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                       12378999999999999776667999997653


No 92 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.08  E-value=4.5e-06  Score=84.56  Aligned_cols=77  Identities=26%  Similarity=0.393  Sum_probs=46.0

Q ss_pred             ceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecccc
Q 005750          162 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN  241 (679)
Q Consensus       162 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~  241 (679)
                      +++.|||++|+|+ .+|+.   +++|++|+|++|+|+.. |+.  +.+|+.|++++|+++ .++.-   .++|++|++++
T Consensus        39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~~l-p~~--~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~  107 (353)
T d1jl5a_          39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLTEL-PEL--PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSN  107 (353)
T ss_dssp             TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCSSC-CCC--CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCS
T ss_pred             CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCccc-ccc--hhhhhhhhhhhcccc-hhhhh---ccccccccccc
Confidence            4566777777776 56643   35667777777777644 321  245666667776666 44431   13466677777


Q ss_pred             cCCCCCCCc
Q 005750          242 NSFVGEIPP  250 (679)
Q Consensus       242 N~l~g~ip~  250 (679)
                      |.++ .+|.
T Consensus       108 n~l~-~lp~  115 (353)
T d1jl5a_         108 NQLE-KLPE  115 (353)
T ss_dssp             SCCS-SCCC
T ss_pred             cccc-cccc
Confidence            7666 5554


No 93 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.04  E-value=3.6e-06  Score=81.73  Aligned_cols=130  Identities=17%  Similarity=0.099  Sum_probs=89.6

Q ss_pred             ccCcCcc-EEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccC--CCcccccccccccceEEEEEEecCCCcH
Q 005750          364 KIGKGSF-GSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEYMHNGTL  440 (679)
Q Consensus       364 ~LG~G~~-g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~~~~~~~lV~E~~~~gsL  440 (679)
                      .+..|.. +.||+...+++..+++|......   ...+..|...++.+..  -.+.+++.+..+++..++||++++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3445553 68999998888889999866432   2346778888887743  3356678877888889999999988765


Q ss_pred             hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 005750          441 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG---------------------------------------------  475 (679)
Q Consensus       441 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~---------------------------------------------  475 (679)
                      .+..        ...   ...+.++++.|+-||+.                                             
T Consensus        94 ~~~~--------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          94 LSSH--------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             TTSC--------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             cccc--------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHH
Confidence            4311        111   12334555555556531                                             


Q ss_pred             ----------CCCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750          476 ----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR  507 (679)
Q Consensus       476 ----------~~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~  507 (679)
                                ....++|+|+.|.||+++++..+-|+||+.+.
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                      01247999999999999987667899999764


No 94 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.00  E-value=5.6e-06  Score=83.81  Aligned_cols=82  Identities=28%  Similarity=0.478  Sum_probs=68.3

Q ss_pred             CCceEEEEcCCCcccccCCccccCCCCCCEEECCCCcCCCCCCCCCCCCCCcEEEecCccCCCCCCCCCCCCCccceecc
Q 005750          160 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI  239 (679)
Q Consensus       160 ~~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l  239 (679)
                      +++|+.|+|++|+|+ .+|..+   .+|+.|++++|+++.. +.+.  +.|++|+|++|.++ .+|. ++.+++|+.|++
T Consensus        57 ~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l-~~lp--~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l  127 (353)
T d1jl5a_          57 PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKAL-SDLP--PLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDV  127 (353)
T ss_dssp             CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCC-CSCC--TTCCEEECCSSCCS-SCCC-CTTCTTCCEEEC
T ss_pred             CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchh-hhhc--cccccccccccccc-cccc-hhhhccceeecc
Confidence            468999999999999 888764   5789999999999864 3332  46999999999999 7886 688999999999


Q ss_pred             cccCCCCCCCcc
Q 005750          240 ENNSFVGEIPPA  251 (679)
Q Consensus       240 ~~N~l~g~ip~~  251 (679)
                      ++|.++ ..|..
T Consensus       128 ~~~~~~-~~~~~  138 (353)
T d1jl5a_         128 DNNSLK-KLPDL  138 (353)
T ss_dssp             CSSCCS-CCCCC
T ss_pred             cccccc-ccccc
Confidence            999998 55544


No 95 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.89  E-value=4.7e-07  Score=82.10  Aligned_cols=73  Identities=25%  Similarity=0.214  Sum_probs=51.3

Q ss_pred             cCCccccCCCCCCEEECCCCcCCCCCC--C-CCCCCCCcEEEecCccCCCCCCC-CCCCCCccceecccccCCCCCCC
Q 005750          176 EIPPELKNMEALTELWLDGNFLTGPLP--D-MSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIP  249 (679)
Q Consensus       176 ~~p~~~~~l~~L~~L~L~~N~l~~~~p--~-~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~ip  249 (679)
                      .++..+.++++|++|+|++|+|+...+  . +..+++|+.|+|++|+++ .+++ ......+|+.|++++|.++....
T Consensus        56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~  132 (162)
T d1koha1          56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFR  132 (162)
T ss_dssp             HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred             hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCcc
Confidence            444445678888888888888887643  3 667888888888888888 5554 22334568888888888875443


No 96 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.85  E-value=1.5e-05  Score=76.42  Aligned_cols=95  Identities=16%  Similarity=0.118  Sum_probs=55.3

Q ss_pred             CceEEEEcCCCcccccCCccccCCC-CCCEEECCCCcCCCCCCCCCCCCCCcEE-EecCccCCCCCCC-CCCCCCcccee
Q 005750          161 PRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIV-HLENNELTGSLPS-YMGSLPNLQEL  237 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L-~l~~N~l~g~~p~-~~~~l~~L~~L  237 (679)
                      ..+..+..+++.+...-+..+..++ .++.|++++|+++...+...+..+++.+ ++++|+|+ .+|. .|.++++|++|
T Consensus       128 ~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L  206 (242)
T d1xwdc1         128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVIL  206 (242)
T ss_dssp             SCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEE
T ss_pred             cccccccccccccccccccccccccccceeeecccccccccccccccchhhhccccccccccc-cccHHHhcCCCCCCEE
Confidence            3555566666666644444555553 5666677777776655554444444433 45666666 5544 35666777777


Q ss_pred             cccccCCCCCCCccccCCce
Q 005750          238 HIENNSFVGEIPPALLTGKV  257 (679)
Q Consensus       238 ~l~~N~l~g~ip~~~~~~~~  257 (679)
                      +|++|+|+ .+|...+....
T Consensus       207 ~Ls~N~l~-~l~~~~~~~l~  225 (242)
T d1xwdc1         207 DISRTRIH-SLPSYGLENLK  225 (242)
T ss_dssp             ECTTSCCC-CCCSSSCTTCC
T ss_pred             ECCCCcCC-ccCHHHHcCCc
Confidence            77777776 66665555443


No 97 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62  E-value=1.2e-06  Score=79.34  Aligned_cols=78  Identities=23%  Similarity=0.318  Sum_probs=43.7

Q ss_pred             CceEEEEcCCCccccc--CCccccCCCCCCEEECCCCcCCCCCC-CCCCCCCCcEEEecCccCCCCCCCC-------CCC
Q 005750          161 PRITKIALSGKNLKGE--IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSY-------MGS  230 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~--~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~l~~N~l~g~~p~~-------~~~  230 (679)
                      ++|+.|+|++|+|+..  ++..+..|++|+.|+|++|.|+...+ .+....+|+.|+|++|.++......       +..
T Consensus        65 ~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~  144 (162)
T d1koha1          65 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRER  144 (162)
T ss_dssp             TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTT
T ss_pred             CCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHH
Confidence            4566666666666632  22345566666666666666666544 2223345666666666666443321       345


Q ss_pred             CCccceec
Q 005750          231 LPNLQELH  238 (679)
Q Consensus       231 l~~L~~L~  238 (679)
                      +|+|+.||
T Consensus       145 ~P~L~~LD  152 (162)
T d1koha1         145 FPKLLRLD  152 (162)
T ss_dssp             STTCCEET
T ss_pred             CCCCCEEC
Confidence            56666554


No 98 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.51  E-value=8.7e-05  Score=76.76  Aligned_cols=76  Identities=16%  Similarity=0.183  Sum_probs=49.1

Q ss_pred             ccccCcCccEEEEEEEEcC-CcEEEEEEecCCc-------chhHHHHHHHHHHHHhcc-C--CCcccccccccccceEEE
Q 005750          362 CKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSC-------SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEEHQRIL  430 (679)
Q Consensus       362 ~~~LG~G~~g~Vy~a~~~~-~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~-h--pnIv~l~~~~~~~~~~~l  430 (679)
                      .+.||.|....||++...+ ++.|+||.-....       .....+...|.+.|+.+. +  ..+.+++.+.  .+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence            3578999999999998764 6789999754311       112344567888888773 2  2345555443  345589


Q ss_pred             EEEecCCCc
Q 005750          431 VYEYMHNGT  439 (679)
Q Consensus       431 V~E~~~~gs  439 (679)
                      |||++.+..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997654


No 99 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.37  E-value=0.00023  Score=71.43  Aligned_cols=135  Identities=12%  Similarity=0.141  Sum_probs=79.4

Q ss_pred             EEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC--cccccc-----cccccceEEEEEEecCCCcHh--
Q 005750          371 GSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIG-----YCEEEHQRILVYEYMHNGTLR--  441 (679)
Q Consensus       371 g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~-----~~~~~~~~~lV~E~~~~gsL~--  441 (679)
                      -.||+++.++|+.|++|+.+.. ....+++..|.+.+..|....  ++..+.     .+...+..+.++++++|..+.  
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            4899999999999999998654 234577888999998885322  222221     223456678999999764321  


Q ss_pred             ----------------hhhcccC--CCCCCCHH----------------------HHHHHHHHHHHHHHHH-HhcCCCCc
Q 005750          442 ----------------DRLHGSV--NQKPLDWL----------------------TRLQIAHDAAKGLEYL-HTGCNPGI  480 (679)
Q Consensus       442 ----------------~~l~~~~--~~~~l~~~----------------------~~~~i~~qia~aL~~L-H~~~~~~i  480 (679)
                                      .......  .....+..                      .....+.++...+.-. .+....++
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence                            0101000  11111211                      1122223333333222 12224678


Q ss_pred             cccCCCCCCccccCCCcEEEeeccCccc
Q 005750          481 IHRDVKSSNILLDINMRAKVSDFGLSRQ  508 (679)
Q Consensus       481 vH~Dlkp~NIll~~~~~~kL~Dfgla~~  508 (679)
                      +|+|+.+.|||++++  ..++||+-+..
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ecCCCCcccEEEeCC--ceEEechhccc
Confidence            999999999999743  45899997764


No 100
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.18  E-value=2.2e-05  Score=82.22  Aligned_cols=84  Identities=31%  Similarity=0.398  Sum_probs=44.5

Q ss_pred             ceEEEEcCCCcccc----cCCccccCCCCCCEEECCCCcCCCC----CC-CCC-CCCCCcEEEecCccCCCC----CCCC
Q 005750          162 RITKIALSGKNLKG----EIPPELKNMEALTELWLDGNFLTGP----LP-DMS-RLIDLRIVHLENNELTGS----LPSY  227 (679)
Q Consensus       162 ~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~----~p-~~~-~l~~L~~L~l~~N~l~g~----~p~~  227 (679)
                      +++.|+|++|+|+-    .++..+..+++|+.|||++|.|+..    +. .+. ...+|+.|+|++|+++..    ++..
T Consensus        28 ~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~  107 (460)
T d1z7xw1          28 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST  107 (460)
T ss_dssp             TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccch
Confidence            44556666666551    2334455666666666666665421    11 121 223566666666666532    3445


Q ss_pred             CCCCCccceecccccCCC
Q 005750          228 MGSLPNLQELHIENNSFV  245 (679)
Q Consensus       228 ~~~l~~L~~L~l~~N~l~  245 (679)
                      +..+++|++|+|++|.++
T Consensus       108 l~~~~~L~~L~L~~N~i~  125 (460)
T d1z7xw1         108 LRTLPTLQELHLSDNLLG  125 (460)
T ss_dssp             TTSCTTCCEEECCSSBCH
T ss_pred             hhccccccccccccccch
Confidence            555666666666666654


No 101
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.84  E-value=3.2e-05  Score=80.91  Aligned_cols=106  Identities=17%  Similarity=0.173  Sum_probs=76.5

Q ss_pred             CceEEEEcCCCccccc-CCccccCCCCCCEEECCCCcCCC----CCC-CCCCCCCCcEEEecCccCCC----CCCCCCC-
Q 005750          161 PRITKIALSGKNLKGE-IPPELKNMEALTELWLDGNFLTG----PLP-DMSRLIDLRIVHLENNELTG----SLPSYMG-  229 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~-~p~~~~~l~~L~~L~L~~N~l~~----~~p-~~~~l~~L~~L~l~~N~l~g----~~p~~~~-  229 (679)
                      ++|+.|||++|++++. +..-+..+++|++|+|++|.|+-    .+. .+..+++|+.|||++|+|+.    .+...+. 
T Consensus         2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~   81 (460)
T d1z7xw1           2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT   81 (460)
T ss_dssp             EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred             CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence            4799999999999864 24557788999999999999873    233 36789999999999999862    1233333 


Q ss_pred             CCCccceecccccCCCCC----CCcccc--CCceeeeecCCCC
Q 005750          230 SLPNLQELHIENNSFVGE----IPPALL--TGKVIFKYDNNPK  266 (679)
Q Consensus       230 ~l~~L~~L~l~~N~l~g~----ip~~~~--~~~~~~~~~~n~~  266 (679)
                      ..++|+.|+|++|+++..    ++..+.  ..+..+.+++|+.
T Consensus        82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i  124 (460)
T d1z7xw1          82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL  124 (460)
T ss_dssp             TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred             CCCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence            235899999999999732    222222  2456667777753


No 102
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.67  E-value=0.00025  Score=69.72  Aligned_cols=36  Identities=22%  Similarity=0.185  Sum_probs=17.6

Q ss_pred             CCCCCcEEEecCc-cCCCCCCCCCCCCCccceecccc
Q 005750          206 RLIDLRIVHLENN-ELTGSLPSYMGSLPNLQELHIEN  241 (679)
Q Consensus       206 ~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~  241 (679)
                      ++++|+.|+|++| .+++..+..++++++|++|+|++
T Consensus       173 ~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~  209 (284)
T d2astb2         173 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSR  209 (284)
T ss_dssp             HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred             ccccccccccccccCCCchhhhhhcccCcCCEEECCC
Confidence            3445555555443 34444444445555555555554


No 103
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.67  E-value=0.00033  Score=68.76  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=63.2

Q ss_pred             CceEEEEcCCC--ccccc-CCccccCCCCCCEEECCCC-cCCCCCC-CCCCCCCCcEEEecC-ccCCCCCCCCCCCCCcc
Q 005750          161 PRITKIALSGK--NLKGE-IPPELKNMEALTELWLDGN-FLTGPLP-DMSRLIDLRIVHLEN-NELTGSLPSYMGSLPNL  234 (679)
Q Consensus       161 ~~l~~L~L~~n--~l~g~-~p~~~~~l~~L~~L~L~~N-~l~~~~p-~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L  234 (679)
                      ++|+.|+|++.  +++.. +..-+.++++|+.|+|++| .+++... .+.++++|++|+|++ +++++.....++++++|
T Consensus       148 ~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L  227 (284)
T d2astb2         148 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL  227 (284)
T ss_dssp             TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred             cccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCC
Confidence            57899999864  34432 3334567899999999886 5776544 688999999999999 46887777778889999


Q ss_pred             ceeccccc
Q 005750          235 QELHIENN  242 (679)
Q Consensus       235 ~~L~l~~N  242 (679)
                      +.|+++++
T Consensus       228 ~~L~l~~~  235 (284)
T d2astb2         228 KTLQVFGI  235 (284)
T ss_dssp             CEEECTTS
T ss_pred             CEEeeeCC
Confidence            99999876


No 104
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.64  E-value=0.0028  Score=65.05  Aligned_cols=72  Identities=14%  Similarity=0.240  Sum_probs=50.6

Q ss_pred             cccCcCccEEEEEEEEcC--------CcEEEEEEecCCcchhHHHHHHHHHHHHhcc-CCCcccccccccccceEEEEEE
Q 005750          363 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE  433 (679)
Q Consensus       363 ~~LG~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E  433 (679)
                      +.|+.|-.-.+|++...+        .+.|++++.....  ......+|..+++.+. +.-..++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~--~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc--hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            568889999999998754        3567888765322  2234568999999885 4434577777754    68999


Q ss_pred             ecCCCcH
Q 005750          434 YMHNGTL  440 (679)
Q Consensus       434 ~~~~gsL  440 (679)
                      |++|..+
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987544


No 105
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.60  E-value=0.0001  Score=74.66  Aligned_cols=85  Identities=21%  Similarity=0.315  Sum_probs=50.7

Q ss_pred             CceEEEEcCCCcccc----cCCccccCCCCCCEEECCCCcCCCC-----C-CCCCCCCCCcEEEecCccCCCC----CCC
Q 005750          161 PRITKIALSGKNLKG----EIPPELKNMEALTELWLDGNFLTGP-----L-PDMSRLIDLRIVHLENNELTGS----LPS  226 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~-----~-p~~~~l~~L~~L~l~~N~l~g~----~p~  226 (679)
                      +.|+.|++++|.+..    .+...+..++.|+.|+|++|+|+..     + ..+..+++|+.|+|++|.++..    +..
T Consensus       158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~  237 (344)
T d2ca6a1         158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI  237 (344)
T ss_dssp             CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred             cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc
Confidence            356667777666642    2233455566777777777766531     1 2356666677777777766422    334


Q ss_pred             CCCCCCccceecccccCCC
Q 005750          227 YMGSLPNLQELHIENNSFV  245 (679)
Q Consensus       227 ~~~~l~~L~~L~l~~N~l~  245 (679)
                      .+..+++|++|+|++|.|+
T Consensus       238 ~l~~~~~L~~L~Ls~n~i~  256 (344)
T d2ca6a1         238 ALKSWPNLRELGLNDCLLS  256 (344)
T ss_dssp             HGGGCTTCCEEECTTCCCC
T ss_pred             cccccccchhhhhhcCccC
Confidence            4556667777777777665


No 106
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.56  E-value=0.00014  Score=73.60  Aligned_cols=85  Identities=19%  Similarity=0.191  Sum_probs=49.4

Q ss_pred             CceEEEEcCCCccccc-----CCccccCCCCCCEEECCCCcCCCC----C-CCCCCCCCCcEEEecCccCCCCCC----C
Q 005750          161 PRITKIALSGKNLKGE-----IPPELKNMEALTELWLDGNFLTGP----L-PDMSRLIDLRIVHLENNELTGSLP----S  226 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~-----~p~~~~~l~~L~~L~L~~N~l~~~----~-p~~~~l~~L~~L~l~~N~l~g~~p----~  226 (679)
                      ..++.|+|++|++...     +...+..+++|+.|+|++|.|+..    + ..+..+++|+.|+|++|.|++.-.    .
T Consensus       186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~  265 (344)
T d2ca6a1         186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD  265 (344)
T ss_dssp             TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred             hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHH
Confidence            3567777777776531     334456667777777777766432    1 235666777777777777663311    1


Q ss_pred             CCC--CCCccceecccccCCC
Q 005750          227 YMG--SLPNLQELHIENNSFV  245 (679)
Q Consensus       227 ~~~--~l~~L~~L~l~~N~l~  245 (679)
                      .+.  ..++|+.|++++|+++
T Consensus       266 ~l~~~~~~~L~~L~ls~N~i~  286 (344)
T d2ca6a1         266 AFSKLENIGLQTLRLQYNEIE  286 (344)
T ss_dssp             HHHTCSSCCCCEEECCSSCCB
T ss_pred             HhhhccCCCCCEEECCCCcCC
Confidence            121  1245677777777765


No 107
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.46  E-value=0.00022  Score=64.17  Aligned_cols=85  Identities=14%  Similarity=0.167  Sum_probs=64.9

Q ss_pred             CceEEEEcCCC-ccccc----CCccccCCCCCCEEECCCCcCCCC--CC---CCCCCCCCcEEEecCccCCCC----CCC
Q 005750          161 PRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGP--LP---DMSRLIDLRIVHLENNELTGS----LPS  226 (679)
Q Consensus       161 ~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~--~p---~~~~l~~L~~L~l~~N~l~g~----~p~  226 (679)
                      +.|++|+|+++ .++..    +-..+...+.|+.|+|++|.|...  ..   .+...+.|+.|+|++|.++..    +-.
T Consensus        15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~   94 (167)
T d1pgva_          15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR   94 (167)
T ss_dssp             SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred             CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence            58999999974 46432    334577889999999999998743  11   256678899999999999843    233


Q ss_pred             CCCCCCccceecccccCCC
Q 005750          227 YMGSLPNLQELHIENNSFV  245 (679)
Q Consensus       227 ~~~~l~~L~~L~l~~N~l~  245 (679)
                      .+...++|+.|+|++|.+.
T Consensus        95 aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          95 STLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             HTTTTCCCSEEECCCCSSC
T ss_pred             HHHhCCcCCEEECCCCcCC
Confidence            5677789999999999876


No 108
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.13  E-value=0.0092  Score=58.73  Aligned_cols=141  Identities=12%  Similarity=0.088  Sum_probs=74.0

Q ss_pred             ccCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCC--ccccccc------ccccceEEEEEEec
Q 005750          364 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEYM  435 (679)
Q Consensus       364 ~LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~------~~~~~~~~lV~E~~  435 (679)
                      .|..|.--+.|+.+.++|+ +++|+.....  ..+++..|++++..|...+  +...+..      .........++.++
T Consensus        25 ~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~  101 (316)
T d2ppqa1          25 GIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL  101 (316)
T ss_dssp             EECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred             cCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeec
Confidence            4567777889999887665 8999986432  2345566777777774322  2222211      12234566777777


Q ss_pred             CCCcHhh--------------hhcc----cCC--CCCCCHH------------------HHHHHHHHHHHHHHHHHh-cC
Q 005750          436 HNGTLRD--------------RLHG----SVN--QKPLDWL------------------TRLQIAHDAAKGLEYLHT-GC  476 (679)
Q Consensus       436 ~~gsL~~--------------~l~~----~~~--~~~l~~~------------------~~~~i~~qia~aL~~LH~-~~  476 (679)
                      .+.....              .++.    ...  .......                  .....+..+...+...+. ..
T Consensus       102 ~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  181 (316)
T d2ppqa1         102 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL  181 (316)
T ss_dssp             CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred             ccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcccc
Confidence            6543211              0000    000  0000000                  011112222222222221 23


Q ss_pred             CCCccccCCCCCCccccCCCcEEEeeccCcc
Q 005750          477 NPGIIHRDVKSSNILLDINMRAKVSDFGLSR  507 (679)
Q Consensus       477 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfgla~  507 (679)
                      ..|+||+|+.++||+++.+...-|.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            5789999999999999988777899999775


No 109
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.14  E-value=0.0011  Score=59.24  Aligned_cols=83  Identities=17%  Similarity=0.158  Sum_probs=59.9

Q ss_pred             CceEEEEcCCCccccc----CCccccCCCCCCEEECCCCcCCCCC-----CCCCCCCCCcEEEecCccCCCC-------C
Q 005750          161 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPL-----PDMSRLIDLRIVHLENNELTGS-------L  224 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~l~~L~~L~l~~N~l~g~-------~  224 (679)
                      ..|+.|+|++|.+...    +...+...+.|+.|+|++|.|+..-     ..+..-+.|+.|+|++|++...       +
T Consensus        44 ~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l  123 (167)
T d1pgva_          44 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM  123 (167)
T ss_dssp             SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred             CccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHH
Confidence            4799999999999743    2334666799999999999998641     1377788999999999987621       2


Q ss_pred             CCCCCCCCccceecccccC
Q 005750          225 PSYMGSLPNLQELHIENNS  243 (679)
Q Consensus       225 p~~~~~l~~L~~L~l~~N~  243 (679)
                      ...+...++|+.|+++.+.
T Consensus       124 ~~~L~~n~sL~~l~l~~~~  142 (167)
T d1pgva_         124 MMAIEENESLLRVGISFAS  142 (167)
T ss_dssp             HHHHHHCSSCCEEECCCCC
T ss_pred             HHHHHhCCCccEeeCcCCC
Confidence            2334445677777765543


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=92.12  E-value=0.0076  Score=53.38  Aligned_cols=85  Identities=21%  Similarity=0.292  Sum_probs=59.6

Q ss_pred             CceEEEEcCC-Cccccc----CCccccCCCCCCEEECCCCcCCCCCC-----CCCCCCCCcEEEecCccCCCC----CCC
Q 005750          161 PRITKIALSG-KNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNELTGS----LPS  226 (679)
Q Consensus       161 ~~l~~L~L~~-n~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~l~~N~l~g~----~p~  226 (679)
                      +.|+.|+|++ +.++..    +-..+...++|+.|+|++|.++..--     .+...++|+.|++++|.++..    +-.
T Consensus        17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~   96 (166)
T d1io0a_          17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE   96 (166)
T ss_dssp             TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred             CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence            5889999987 456432    33456678999999999998876421     256678899999999988633    234


Q ss_pred             CCCCCCccceecc--cccCCC
Q 005750          227 YMGSLPNLQELHI--ENNSFV  245 (679)
Q Consensus       227 ~~~~l~~L~~L~l--~~N~l~  245 (679)
                      .+...++|+.++|  ++|.+.
T Consensus        97 ~l~~~~~L~~l~L~l~~n~i~  117 (166)
T d1io0a_          97 ALQSNTSLIELRIDNQSQPLG  117 (166)
T ss_dssp             GGGGCSSCCEEECCCCSSCCC
T ss_pred             HHHhCccccEEeeccCCCcCc
Confidence            5667788886444  566664


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=89.96  E-value=0.0081  Score=53.20  Aligned_cols=84  Identities=14%  Similarity=0.231  Sum_probs=62.4

Q ss_pred             CceEEEEcCCCccccc----CCccccCCCCCCEEECCCCcCCCCC-----CCCCCCCCCcEEEe--cCccCCC----CCC
Q 005750          161 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPL-----PDMSRLIDLRIVHL--ENNELTG----SLP  225 (679)
Q Consensus       161 ~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~l~~L~~L~l--~~N~l~g----~~p  225 (679)
                      ++|+.|+|++|.++..    +-..+...+.|+.|++++|.++..-     ..+...++|+.++|  ++|.+..    .+.
T Consensus        46 ~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La  125 (166)
T d1io0a_          46 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA  125 (166)
T ss_dssp             CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred             CccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHH
Confidence            5899999999998754    3345667899999999999987542     24778889987666  5667752    244


Q ss_pred             CCCCCCCccceecccccCC
Q 005750          226 SYMGSLPNLQELHIENNSF  244 (679)
Q Consensus       226 ~~~~~l~~L~~L~l~~N~l  244 (679)
                      ..+...++|+.|+++.|+.
T Consensus       126 ~~L~~n~~L~~L~l~~~~~  144 (166)
T d1io0a_         126 NMLEKNTTLLKFGYHFTQQ  144 (166)
T ss_dssp             HHHHHCSSCCEEECCCSSH
T ss_pred             HHHHhCCCcCEEeCcCCCC
Confidence            5566788899998876654


No 112
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=40.36  E-value=51  Score=30.69  Aligned_cols=132  Identities=11%  Similarity=0.038  Sum_probs=73.1

Q ss_pred             cCcCccEEEEEEEEcCCcEEEEEEecCCcchhHHHHHHHHHHHHhccCCCcccccccc----------------------
Q 005750          365 IGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC----------------------  422 (679)
Q Consensus       365 LG~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~----------------------  422 (679)
                      +..+|.+-|+-+..+ +..++||.-.   ....+.+..|+...-.+..|...-+. .+                      
T Consensus        76 ~s~~Gs~Gv~FV~~e-~gaiVlK~s~---tta~E~y~~eLAr~LGvpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~I~  150 (342)
T d1cjaa_          76 RSEKGTEGLFFVETE-SGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVIT  150 (342)
T ss_dssp             ECCSTTSCEEEEEES-SCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred             EeecCCceEEEEEcC-CceEEEecCC---chHHHHHHHHHHHHhCCCCCceEEec-CCCHHHHHHHHHHhcCCChhHHHH
Confidence            445555556666554 5567778632   33446666676666666777654432 11                      


Q ss_pred             -cccceEEEEEEecCCCcHhhhhcccCCCCCCCHHHHHHHHHHH---HHHHHHHHhcCCCCccccCC-CCCCccccCCC-
Q 005750          423 -EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDA---AKGLEYLHTGCNPGIIHRDV-KSSNILLDINM-  496 (679)
Q Consensus       423 -~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi---a~aL~~LH~~~~~~ivH~Dl-kp~NIll~~~~-  496 (679)
                       .-.....++|||.+|.+|.+.-..     ..+.....+.+.++   +--=.+++..+.-++.+++- .+.||+++.++ 
T Consensus       151 sel~~A~~liMeYvpG~~l~e~~~~-----~a~~~fs~~~l~~LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~  225 (342)
T d1cjaa_         151 TLANQANILLMELVRGITLNKLTTT-----SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA  225 (342)
T ss_dssp             HHTTCSEEEEEECCCEEESTTCCSS-----SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred             HHHhcccceeeeccCCccccccccc-----cchhhhcHHHHHHhhhHHHHHHHHcCCccccccccCCCCccceEEecCCc
Confidence             012346899999998887554321     11111112223332   22223466544456666632 78999998766 


Q ss_pred             cEEEeeccCc
Q 005750          497 RAKVSDFGLS  506 (679)
Q Consensus       497 ~~kL~Dfgla  506 (679)
                      .+..+|=+..
T Consensus       226 ~~~~IDs~i~  235 (342)
T d1cjaa_         226 TVVPIDSKII  235 (342)
T ss_dssp             CEEECSCCCC
T ss_pred             EEEEecCCcc
Confidence            6777775544


No 113
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.03  E-value=38  Score=24.27  Aligned_cols=30  Identities=10%  Similarity=0.099  Sum_probs=25.5

Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 005750          606 EVAIQCVEQRGFSRPKMQEIVLAIQDSIKI  635 (679)
Q Consensus       606 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~  635 (679)
                      .||..++...|++|.|.+||.+.+++--.-
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~fpy   32 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGKFPF   32 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhCcc
Confidence            577888888999999999999999876543


Done!