Query 005752
Match_columns 679
No_of_seqs 230 out of 564
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 06:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005752.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005752hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 9E-146 3E-150 1254.5 62.1 576 1-679 23-642 (646)
2 2p9r_A Alpha-2-M, alpha-2-macr 95.4 0.083 2.8E-06 45.9 9.7 88 569-679 10-97 (102)
3 4fxk_A Complement C4 beta chai 83.0 3.8 0.00013 46.4 10.0 82 560-658 120-201 (656)
4 2pn5_A TEP1R, thioester-contai 79.1 6.8 0.00023 48.6 11.1 85 560-658 100-184 (1325)
5 4acq_A Alpha-2-macroglobulin; 74.8 10 0.00034 47.7 10.9 85 559-658 103-187 (1451)
6 3hrz_A Cobra venom factor; ser 73.9 3.1 0.0001 47.7 5.5 79 560-658 104-182 (627)
7 2hr0_A Complement C3 beta chai 61.6 29 0.00099 39.4 10.3 75 569-657 114-188 (645)
8 3prx_B Cobra venom factor; imm 54.3 39 0.0013 43.0 10.5 79 560-658 126-204 (1642)
9 2vtc_A CEL61B, cellulase; hydr 47.7 2.3 8E-05 43.2 -1.6 87 571-660 90-183 (249)
10 1lyq_A PCOC copper resistance 46.2 1.5E+02 0.005 25.7 10.3 29 576-610 20-48 (104)
11 2c9r_A COPC, copper resistance 46.1 1.4E+02 0.0049 25.6 11.1 59 576-642 19-85 (102)
12 3eja_A Protein GH61E; beta san 43.4 18 0.00063 35.6 4.1 24 638-661 119-142 (208)
13 2b39_A C3; thioester, immune d 39.4 51 0.0017 41.9 8.3 75 569-657 135-209 (1661)
14 3zxn_A RSBS, anti-sigma-factor 35.7 56 0.0019 28.8 5.8 48 427-479 5-52 (123)
15 3cu7_A Complement C5; Mg domai 34.7 51 0.0018 41.9 7.2 81 560-657 124-205 (1676)
16 4ank_A Transthyretin; hormone 31.6 42 0.0014 31.3 4.3 43 600-659 52-98 (147)
17 2v94_A RPS24, 30S ribosomal pr 30.1 51 0.0018 29.1 4.4 45 34-80 27-71 (107)
18 2dle_A Receptor-type tyrosine- 30.0 39 0.0013 28.9 3.6 25 634-658 22-48 (104)
19 1uiz_A MIF, macrophage migrati 28.9 62 0.0021 27.9 4.8 50 23-75 48-102 (115)
20 1xn9_A 30S ribosomal protein S 28.8 56 0.0019 28.5 4.3 35 44-80 28-62 (101)
21 1hfo_A Migration inhibitory fa 28.5 64 0.0022 27.7 4.8 51 22-75 46-101 (113)
22 1ywx_A 30S ribosomal protein S 26.8 60 0.0021 28.4 4.2 35 44-80 28-62 (102)
23 4eyb_A Beta-lactamase NDM-1; m 26.6 1E+02 0.0035 30.5 6.6 49 20-77 75-123 (270)
24 3djh_A Macrophage migration in 24.1 76 0.0026 27.5 4.4 49 22-73 46-99 (114)
25 2wkb_A Macrophage migration in 23.1 68 0.0023 28.2 4.0 44 30-75 54-102 (125)
26 1vra_A Arginine biosynthesis b 22.5 1.2E+02 0.0042 29.7 5.9 46 19-74 89-136 (208)
27 1u9d_A Hypothetical protein VC 22.1 3.6E+02 0.012 24.1 8.5 77 47-129 32-111 (122)
28 2g1d_A 30S ribosomal protein S 21.3 53 0.0018 28.6 2.7 36 43-80 28-63 (98)
29 3fwu_A Macrophage migration in 20.9 69 0.0024 28.9 3.6 44 30-75 75-123 (133)
30 2dhm_A Protein BOLA; stationar 20.5 1.1E+02 0.0038 26.9 4.6 37 47-86 10-46 (107)
31 2xzm_P RPS24E; ribosome, trans 20.4 97 0.0033 28.9 4.4 41 38-80 25-65 (149)
32 2xcz_A Possible ATLS1-like lig 20.0 3.9E+02 0.013 22.6 8.3 85 44-131 16-103 (115)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=8.6e-146 Score=1254.49 Aligned_cols=576 Identities=42% Similarity=0.709 Sum_probs=529.7
Q ss_pred CCcccCCCCccceeecceEEEEEEEEeC-CCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 005752 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (679)
Q Consensus 1 m~GYa~~~q~a~Gihd~L~ARAlvl~~~-~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP 79 (679)
||||+.+.|+++|||||||||||||+++ +++|+|||++|++|+++.++++|+++|++++|++|+.+||+||+|||||||
T Consensus 23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP 102 (646)
T 2zws_A 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP 102 (646)
T ss_dssp EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence 8999999999999999999999999984 389999999999999999999999999999998899999999999999999
Q ss_pred CCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhccCCChhhcccCCCCCCC
Q 005752 80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK 159 (679)
Q Consensus 80 ~g~~~~~~~~i~~~g~~~~y~~~lvd~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NRs~~ay~~NP~~er~~~~g~vD~ 159 (679)
++|+++.+++++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+.+|++|| ||.+|++++||
T Consensus 103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~ 180 (646)
T 2zws_A 103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180 (646)
T ss_dssp CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeEEEEEEeCCCCeEEEEEeeeccccccCCCCccccCCcHHHHHHHHHHHhcccCCCCCCcccccccCCCcccccccccc
Q 005752 160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239 (679)
Q Consensus 160 ~v~vL~f~~~dG~~ia~L~nyA~HpTsl~~~N~lIS~D~~G~a~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (679)
+|++|+|++.||+++|+|+|||||||+|+++|++||+||+|+++++||+.+++
T Consensus 181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~--------------------------- 233 (646)
T 2zws_A 181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR--------------------------- 233 (646)
T ss_dssp EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC---------------------------
T ss_pred ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC---------------------------
Confidence 99999999989999999999999999999999999999999999999997542
Q ss_pred ccchhHHHHHhhccCCCCCCchhhhhhhhhhhccccccccCCCcEEEEecccccCCCCCCCCcccccCCCCCCCCCCcCC
Q 005752 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG 319 (679)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qg~~GDvSPn~~g~~~~d~g~~c~~~~s~c~ 319 (679)
+++||++|+|||+||+|||+.
T Consensus 234 ----------------------------------------~~~fva~F~qg~~GDvsP~~~------------------- 254 (646)
T 2zws_A 234 ----------------------------------------KSGFVAAFAQTNAGNLSPNLN------------------- 254 (646)
T ss_dssp ----------------------------------------STTCEEEEECSSCTTEEECCC-------------------
T ss_pred ----------------------------------------CCCeEEEEeccCcccCCcccc-------------------
Confidence 236999999999999999975
Q ss_pred CCCcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhhccccccCceeeEEEeeecCcceeecCCCCCCcccccccccccc
Q 005752 320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG 399 (679)
Q Consensus 320 ~~~~~~~~~Gp~~~d~~~~~~~iG~~q~~~a~~l~~~~~~~l~g~v~~~~~~vd~~~~~v~~~~~~~~~~~~~tc~~a~G 399 (679)
.|+++||+ .++++++++||++|+++|++++++..++++|+|+++|++|||+++++.++..+ ++..+||+++||
T Consensus 255 ----~~~~~Gp~-~~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~--g~~~~tc~~a~g 327 (646)
T 2zws_A 255 ----LKPGSGPF-DNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTD--GQPRQLCTAAIG 327 (646)
T ss_dssp ----CCTTCCTT-SCHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGSS--SSCEECCCCCEE
T ss_pred ----ccccCCCC-cccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccCC--cccceechhhhc
Confidence 26678998 58999999999999999999998877889999999999999999998866332 257899999999
Q ss_pred chhhccC-CCCCCCcccccCC-----------C----------------------------CCeeEEEEEEEECCEEEEe
Q 005752 400 FAFAAGT-TDGPGAFDFTQGD-----------D----------------------------KPSILPIQILQVGQLVILS 439 (679)
Q Consensus 400 ~sfaagt-~dgpg~~~f~qg~-----------~----------------------------~p~~~~vq~lriG~l~iv~ 439 (679)
++|+||+ +||||.++|+||. . .|.+++||+||||+++|++
T Consensus 328 ~s~aag~~~dgpg~~~f~q~~~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~~~p~~~~~~~v~vqilriGdl~iv~ 407 (646)
T 2zws_A 328 TSLAAGSTEDGPGPLGLEEGNNPFLSALGGLLTGVPPQELVQCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLG 407 (646)
T ss_dssp C---------------CCSSCCHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTTCSSSCSSCSEEEEEEEEETTEEEEE
T ss_pred hhhhcCCcccCCCccccccccchhhhhhhhhhccccchhHHhhccCcceecccCCCCCcccccceEEEEEEEECCEEEEe
Confidence 9999999 9999999898871 0 0347899999999999999
Q ss_pred cCCccchHHHHHHHHHHHHHhhhcCCCCCCceEEEEeccCcccCccCChhhhccCceeeeeeccCCCcHHHHHHHHHHHH
Q 005752 440 VPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYIQEFKKLA 519 (679)
Q Consensus 440 vPgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~vvv~GlsN~y~gYitT~eeY~~q~YEg~sT~yGp~tl~ay~q~~~~La 519 (679)
+|||+|+|+|+|||+++++.+.+. +...|+|+||+|+|+|||||+|||+.|+||+++|+|||+|+++|+|++.+|+
T Consensus 408 ~PgE~tt~~G~rlr~~~~~~~~~~----~~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~sT~~gp~tl~~~i~~~~~L~ 483 (646)
T 2zws_A 408 APAEFTVMAGVRIRRAVQAASEAA----GIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDMA 483 (646)
T ss_dssp CSSEECHHHHHHHHHHHHHHHGGG----TCCEEEEECSBSSCCCEECCHHHHHHCCTTTTSCTTCTTHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhhhccC----CCceEEEEecCCCCCCccCCHHHHhcCCccceeeecCCChHHHHHHHHHHHH
Confidence 999999999999999999877653 2469999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCcccccccccCCcccCCCCCCCCccceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEE
Q 005752 520 SALLSGQPVELGPQPPDLLDKQISFLTPVVMDSTPIGVNFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFAL 599 (679)
Q Consensus 520 ~~l~~~~~~~~gp~p~d~~~~~~~~~~~v~~D~~p~g~~fGdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~ 599 (679)
++|.+|+++++||.|||++.++++|+++|++|.+|+|++||||++|| +++|++|++|+|+|++||||||||+++||++
T Consensus 484 ~~l~~~~~~~~g~~p~~~~~~~~~~~~~v~~d~~p~~~~fg~v~~~~--~~~y~~g~~v~~~f~~~~p~n~~~~~~t~~~ 561 (646)
T 2zws_A 484 VALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQP--RESYRIGDKVTVAFVTGHPKNDLRTEKTFLE 561 (646)
T ss_dssp HHHHHCCCCCCCCCCCCCGGGCCBCCCCCCCCCCCTTCCTTCEEECC--CSEEETTCEEEEEEECCCGGGCCCTTSCSEE
T ss_pred HHHhcCCCCCCCCCCccccccccccCCCCccCCCCCCCCCCcEeecC--cccccCCCEEEEEEEccCCCcccccCCceEE
Confidence 99999999999999999999999999999999999999999999999 4599999999999999999999999999999
Q ss_pred EEEEeCCCCeE--EEecCCCceeEEEEecCCCCCceeEEEEEEEcCCCCCCcceeEEEeecccc-cCCCceeeEEeccce
Q 005752 600 VEILHGKDIWA--PAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHFGAAKS-LLGSTRHFTGSSSAF 676 (679)
Q Consensus 600 Ver~~~~~~W~--~v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip~~~~~G~YRi~~~G~~k~-~~g~~~~~~g~s~~F 676 (679)
|||+.++|+|+ +|+||+||+|+|+|+|++ .++|++||+|+||++++||+|||+|||+||+ +.|+|+||+|+|++|
T Consensus 562 ve~~~~~~~w~~~~v~~D~d~~t~~~w~r~~--~~~s~~~~~W~i~~~~~~g~yRi~~~g~~k~~~~g~~~~~~g~s~~f 639 (646)
T 2zws_A 562 VVNIGKDGKQTPVTVATDNDWDTQYRWERVG--ISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSF 639 (646)
T ss_dssp EEEEESSSCCCCEEEEETTSTTEEEEEEEET--TTEEEEEEEEECCTTCCSEEEEEEEEEEEECTTTCCEEEEEEECCCE
T ss_pred EEEecCCCceEEEEEecCCCccEEEEEEeCC--CCceEEEEEEECCCCCCCcceEEEEEcccccccCCCceeeEEecccE
Confidence 99977888999 999999999999999998 4899999999999999999999999999999 999999999999999
Q ss_pred EEC
Q 005752 677 VVA 679 (679)
Q Consensus 677 ~v~ 679 (679)
+|.
T Consensus 640 ~v~ 642 (646)
T 2zws_A 640 EVL 642 (646)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=95.40 E-value=0.083 Score=45.90 Aligned_cols=88 Identities=15% Similarity=0.207 Sum_probs=55.5
Q ss_pred CccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEEEEcCCCCCC
Q 005752 569 NTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPL 648 (679)
Q Consensus 569 ~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip~~~~~ 648 (679)
+..|+|||+|.+.++.-++... ......+.|+-.+.+| ....+|.... .....+..+|.+|.+.+.
T Consensus 10 r~iYrPGetV~~~~~~~~~~~~-p~~~~~~~v~l~dp~g-----------~~v~~~~~~~--~~~G~~~~~f~Lp~~~~~ 75 (102)
T 2p9r_A 10 KSIYKPGQTVKFRVVSMDENFH-PLNELIPLVYIQDPKG-----------NRIAQWQSFQ--LEGGLKQFSFPLSSEPFQ 75 (102)
T ss_dssp CSEECTTCEEEEEEEEECGGGC-BCCCEEEEEEEECTTS-----------CEEEEEEEEE--CBTTEEEEEEECCSSCCC
T ss_pred CcccCCCCEEEEEEEEECCCCc-CCCCCceEEEEECCCC-----------CEEEEEEeec--CCCCEEEEEEECCCCCCC
Confidence 4589999999988876554322 2234555666544443 3445554332 123356789999999999
Q ss_pred cceeEEEeecccccCCCceeeEEeccceEEC
Q 005752 649 GVYRIRHFGAAKSLLGSTRHFTGSSSAFVVA 679 (679)
Q Consensus 649 G~YRi~~~G~~k~~~g~~~~~~g~s~~F~v~ 679 (679)
|.|+|+-+-.. |. -.+.+|+|+
T Consensus 76 G~y~i~~~~~~----~~-----~~~~~F~Ve 97 (102)
T 2p9r_A 76 GSYKVVVQKKS----GG-----RTEHPFTVE 97 (102)
T ss_dssp EEEEEEEECTT----SC-----EEEEEEEEC
T ss_pred eeEEEEEEECC----CC-----eEEEEEEEE
Confidence 99999987532 21 145568774
No 3
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=82.99 E-value=3.8 Score=46.42 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=50.6
Q ss_pred cceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEE
Q 005752 560 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 639 (679)
Q Consensus 560 Gdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~ 639 (679)
|-|.-|-+ +..|+|||+|.++.+.-++. ++....-+.|+-.+.+| .....|.-.. ....+..+
T Consensus 120 ~~vFIqTD-r~iYrPGqtV~~r~i~~d~~--~~p~~~~~~v~i~dp~g-----------~~v~~~~~~~---~~G~~~~~ 182 (656)
T 4fxk_A 120 GHLFLQTD-QPIYNPGQRVRYRVFALDQK--MRPSTDTITVMVENSHG-----------LRVRKKEVYM---PSSIFQDD 182 (656)
T ss_dssp SEEEEEES-CSEECTTCEEEEEEEEECSS--SSBCCCCEEEEEECTTC-----------CEEEEEEECC---TTSEEEEE
T ss_pred ccEEEECC-CCCcCCCCEEEEEEEEECCc--cCcCcccceEEEECCCC-----------cEEeeeEEec---CCceEEEE
Confidence 34444432 45999999999887765553 32222233455444443 2233454332 12457789
Q ss_pred EEcCCCCCCcceeEEEeec
Q 005752 640 WRIPDTAPLGVYRIRHFGA 658 (679)
Q Consensus 640 W~ip~~~~~G~YRi~~~G~ 658 (679)
|.+|++.+.|+|+|+..-.
T Consensus 183 f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 183 FVIPDISEPGTWKISARFS 201 (656)
T ss_dssp EECCTTCCSEEEEEEEEES
T ss_pred ecCCCCCCCcCEEEEEEEc
Confidence 9999999999999998643
No 4
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=79.10 E-value=6.8 Score=48.57 Aligned_cols=85 Identities=18% Similarity=0.119 Sum_probs=53.3
Q ss_pred cceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEE
Q 005752 560 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 639 (679)
Q Consensus 560 Gdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~ 639 (679)
+.+.-|-+ ++.|+|||||.++-+.-++....-.....++|+-.+.+| ....+|.... .....+..+
T Consensus 100 ~~~fi~TD-r~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g-----------~~i~~~~~~~--~~~G~~~~~ 165 (1325)
T 2pn5_A 100 ISGLIQVD-KPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQR-----------NVIRKWSTAK--LYAGVFESD 165 (1325)
T ss_dssp EEEEEEES-CSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTC-----------CEEEEEEEEE--CBTTEEEEE
T ss_pred ccEEEecC-CCccCCCCEEEEEEEEecCCccccccCccEEEEEECCCC-----------CEEEEEeccc--CCCCeEecc
Confidence 34444433 458999999998777655543221222345665544443 3345665432 123356789
Q ss_pred EEcCCCCCCcceeEEEeec
Q 005752 640 WRIPDTAPLGVYRIRHFGA 658 (679)
Q Consensus 640 W~ip~~~~~G~YRi~~~G~ 658 (679)
|.+|.+...|.|+|+-+..
T Consensus 166 f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 166 LQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp EECCSSCCCEEEEEEEEET
T ss_pred eECCCCccccceEEEEEeC
Confidence 9999999999999998754
No 5
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=74.82 E-value=10 Score=47.71 Aligned_cols=85 Identities=11% Similarity=0.064 Sum_probs=56.2
Q ss_pred ccceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEE
Q 005752 559 FGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATI 638 (679)
Q Consensus 559 fGdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i 638 (679)
-|-+.-|-+ ++.|+|||+|.++-+.=++.... ...++..|+-.+ .+.....+|.... .....+..
T Consensus 103 ~~~~fiqTD-K~iY~Pgq~V~~rv~~~~~~~~p-~~~~~~~v~i~d-----------p~g~~i~~~~~~~--~~~G~~~~ 167 (1451)
T 4acq_A 103 DSLVFVQTD-KSIYKPGQTVKFRVVSMDENFHP-LNELIPLVYIQD-----------PKGNRIAQWQSFQ--LEGGLKQF 167 (1451)
T ss_dssp CCEEEEEES-CSEECTTCEEEEEEEEECTTCCB-CCCEEEEEEEEC-----------TTSCEEEEEEEEE--CBTTEEEE
T ss_pred CccEEEECC-CCcCCCCCEEEEEEEEECCCCcC-ccCceeEEEEEC-----------CCCCEEEEeeecc--CCCCeEEE
Confidence 355665543 56999999999877776653322 244555555443 3345566776533 22346778
Q ss_pred EEEcCCCCCCcceeEEEeec
Q 005752 639 EWRIPDTAPLGVYRIRHFGA 658 (679)
Q Consensus 639 ~W~ip~~~~~G~YRi~~~G~ 658 (679)
+|.+|+....|+|+|+-...
T Consensus 168 ~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 168 SFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp EEECCSSCCCEEEEEEEECT
T ss_pred EeECCCCCCceeEEEEEEec
Confidence 99999999999999998653
No 6
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=73.86 E-value=3.1 Score=47.70 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=46.0
Q ss_pred cceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEE
Q 005752 560 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 639 (679)
Q Consensus 560 Gdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~ 639 (679)
|-+.-|-+ +..|+|||+|.++++.-++..... +.. ++|+-.+.+| . ++.|.... .. +..+
T Consensus 104 ~~~fi~TD-r~iYrPGqtV~~r~i~~d~~~~p~-~~~-~~v~i~dP~g-----------~-~i~~~~~~--~~---~~~~ 163 (627)
T 3hrz_A 104 SFLFIQTD-KGIYTPGSPVLYRVFSMDHNTSKM-NKT-VIVEFQTPEG-----------I-LVSSNSVD--LN---FFWP 163 (627)
T ss_dssp SCEEEEES-CSEECTTCEECEEEEESCC--------C-EEEEEECTTC-----------C-EEEEEEEB--TT---BCCC
T ss_pred CcEEEECC-CCccCCCCEEEEEEEEECCCCccc-Ccc-EEEEEECCCC-----------C-EEEEEEec--cc---eEEE
Confidence 34444432 459999999999998876543221 222 3444333332 2 22243221 11 6678
Q ss_pred EEcCCCCCCcceeEEEeec
Q 005752 640 WRIPDTAPLGVYRIRHFGA 658 (679)
Q Consensus 640 W~ip~~~~~G~YRi~~~G~ 658 (679)
|.+|++.+.|+|+|+..-.
T Consensus 164 f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 164 YNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp EECCSSCCCEEEEEEEEET
T ss_pred EECCCCCCCeeEEEEEEEC
Confidence 9999999999999998643
No 7
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=61.64 E-value=29 Score=39.37 Aligned_cols=75 Identities=21% Similarity=0.438 Sum_probs=47.8
Q ss_pred CccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEEEEcCCCCCC
Q 005752 569 NTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPL 648 (679)
Q Consensus 569 ~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip~~~~~ 648 (679)
+..|+|||||.++++.-+++ ++.....++|+-.+.+|. .+. +..|+..+ ....+..+|.+|++.+.
T Consensus 114 R~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~dP~g~--~i~-------~~~~~~~~---~~G~~~~~f~Lp~~~~~ 179 (645)
T 2hr0_A 114 KTIYTPGSTVLYRIFTVNHK--LLPVGRTVMVNIENPEGI--PVK-------QDSLSSQN---QLGVLPLSWDIPELVNM 179 (645)
T ss_dssp CSBCCTTSEEEEEEEEECTT--SCBCCCEEEEEEECTTSC--EEE-------EEEEECTT---TTTEEEEEEECCSSCCC
T ss_pred CccCCCCCEEEEEEEEECCC--CcccCceEEEEEECCCCC--EEE-------EEEeeccc---cCCeEEEEEECCCcccc
Confidence 45899999999988876643 332223456765544431 111 22333310 12356789999999999
Q ss_pred cceeEEEee
Q 005752 649 GVYRIRHFG 657 (679)
Q Consensus 649 G~YRi~~~G 657 (679)
|+|+|+-.-
T Consensus 180 G~w~I~v~~ 188 (645)
T 2hr0_A 180 GQWKIRAYY 188 (645)
T ss_dssp SEEEEEEEE
T ss_pred ccEEEEEEE
Confidence 999999864
No 8
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=54.28 E-value=39 Score=43.01 Aligned_cols=79 Identities=19% Similarity=0.129 Sum_probs=49.5
Q ss_pred cceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEE
Q 005752 560 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 639 (679)
Q Consensus 560 Gdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~ 639 (679)
|-+.-|-+ ++.|+|||+|.++-+.-++....- +.+ ++|+- .|.+-....+|.-.. . +..+
T Consensus 126 ~~~FiqTD-k~iYrPGqtV~~rvi~~~~~~~p~-~~~-~~v~i-----------~dP~g~~i~~~~~~~---~---~~~~ 185 (1642)
T 3prx_B 126 SFLFIQTD-KGIYTPGSPVLYRVFSMDHNTSKM-NKT-VIVEF-----------QTPEGILVSSNSVDL---N---FFWP 185 (1642)
T ss_dssp CCEEEEES-CSEECTTCEEEEEEEECCC------CCC-EEEEE-----------ECSSCCEEEEEEECT---T---CCCE
T ss_pred CeEEEEcC-CCcCCCCCEEEEEEEEEcCCCccc-Cce-EEEEE-----------ECCCCCEEEEEEecc---c---ceEE
Confidence 55555543 469999999998877755432211 222 23433 344445555666432 1 6679
Q ss_pred EEcCCCCCCcceeEEEeec
Q 005752 640 WRIPDTAPLGVYRIRHFGA 658 (679)
Q Consensus 640 W~ip~~~~~G~YRi~~~G~ 658 (679)
|.+|+..+.|+|+|+-..+
T Consensus 186 f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 186 YNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp EECCSSCCCEEEEEEEEET
T ss_pred EEcCCCCCceeEEEEEEeC
Confidence 9999999999999998754
No 9
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=47.73 E-value=2.3 Score=43.18 Aligned_cols=87 Identities=15% Similarity=0.183 Sum_probs=43.3
Q ss_pred cccCCCeEEEEEEcc-CCCCCCCCCCCeEE-----EEEEeCCC-CeEEEecCCCceeEEEEecCCCCCceeEEEEEEEcC
Q 005752 571 TFRRGEMVTVSFWSA-CPRNDLMTEGTFAL-----VEILHGKD-IWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIP 643 (679)
Q Consensus 571 ~y~~g~~v~~~F~~a-~Prn~l~~~~tf~~-----Ver~~~~~-~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip 643 (679)
.+..|++|++++.+. -|-+ .=--..||. ++..++.| .|..|..++--...-.|--+. +....-+.+.+||
T Consensus 90 ~v~AG~~v~~~~~~~~~~~~-~GP~~~Ylak~~~~~~~~d~~g~~WFKI~e~G~~~~~g~W~~~~--li~~~~~~~~tIP 166 (249)
T 2vtc_A 90 TAAAGSNIVFQWGPGVWPHP-YGPIVTYVVECSGSCTTVNKNNLRWVKIQEAGINYNTQVWAQQD--LINQGNKWTVKIP 166 (249)
T ss_dssp EEETTCEEEEEEESSCCCCC-SSCEEEEEEECSSCGGGCCGGGCEEEEEEEECEETTTTEEHHHH--HHHTTSEEEEECC
T ss_pred EECCCCEEEEEEeccccccC-CCcHHHhhhcCCccccccCCCCCCEEEEEeecCCCCCCcccchh--hhccCCeeEEEcC
Confidence 577899999988652 2322 101112331 00111112 476665432111112343211 0001124567899
Q ss_pred CCCCCcceeEEEeeccc
Q 005752 644 DTAPLGVYRIRHFGAAK 660 (679)
Q Consensus 644 ~~~~~G~YRi~~~G~~k 660 (679)
.+.+||.|-|||.=-+.
T Consensus 167 ~~l~~G~YLlR~E~iAL 183 (249)
T 2vtc_A 167 SSLRPGNYVFRHELLAA 183 (249)
T ss_dssp TTBCSEEEEEEEEEEEC
T ss_pred CCCCCcceEEEEEeeec
Confidence 99999999999975443
No 10
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=46.21 E-value=1.5e+02 Score=25.69 Aligned_cols=29 Identities=17% Similarity=0.089 Sum_probs=13.5
Q ss_pred CeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeE
Q 005752 576 EMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWA 610 (679)
Q Consensus 576 ~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~ 610 (679)
+.|+.+|= -.+...-+-+.|-..++. .|.
T Consensus 20 ~~V~L~Fs-----e~v~~~~s~v~v~~~~g~-~v~ 48 (104)
T 1lyq_A 20 EKIQLNFS-----ENLTVKFSGAKLTMTGMK-GMS 48 (104)
T ss_dssp CCEEEEES-----SCCCGGGCEEEEEEEEEC----
T ss_pred CEEEEEeC-----CCCcccccEEEEECCCCC-eee
Confidence 56888883 233333344555444333 453
No 11
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=46.13 E-value=1.4e+02 Score=25.60 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=26.6
Q ss_pred CeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEE--------EecCCCceeEEEEecCCCCCceeEEEEEEEc
Q 005752 576 EMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAP--------AYDDDDFCLRFKWSRPSKLSARSMATIEWRI 642 (679)
Q Consensus 576 ~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~--------v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~i 642 (679)
+.|+.+|= -.+....+-+.|-..++. .|.. ...|.+..+.+...-.. +....++|.|++
T Consensus 19 ~~v~L~Fs-----e~v~~~~s~v~v~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~l~~--L~~G~YtV~Wrv 85 (102)
T 2c9r_A 19 AKIELHFS-----ENLVTQFSGAKLVMTAMP-GMEHSPMAVKAAVSGGGDPKTMVITPASP--LTAGTYKVDWRA 85 (102)
T ss_dssp SCEEEEES-----SCCCGGGCEEEEEEEECC------CEEECEEEEECSSTTEEEEEESSC--CCSEEEEEEEEE
T ss_pred CEEEEEeC-----CCCccCccEEEEECCCCC-eeeeccccccccceecCCCCcEEEEECCC--CCCceEEEEEEE
Confidence 56888883 233333344555444333 4544 23344444555544332 344455555554
No 12
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=43.43 E-value=18 Score=35.62 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=19.4
Q ss_pred EEEEcCCCCCCcceeEEEeecccc
Q 005752 638 IEWRIPDTAPLGVYRIRHFGAAKS 661 (679)
Q Consensus 638 i~W~ip~~~~~G~YRi~~~G~~k~ 661 (679)
.+.+||.+.++|.|-|||.=-+..
T Consensus 119 ~~~~iP~~l~~G~YllR~E~ialh 142 (208)
T 3eja_A 119 FAVPIPPCIKSGYYLLRAEQIGLH 142 (208)
T ss_dssp EEEECCSSBCSEEEEEEEEEEECT
T ss_pred eEEeccCCCCCcceEEEeeeeeec
Confidence 466799999999999999755543
No 13
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=39.42 E-value=51 Score=41.94 Aligned_cols=75 Identities=21% Similarity=0.415 Sum_probs=47.0
Q ss_pred CccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEEEEEEcCCCCCC
Q 005752 569 NTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPL 648 (679)
Q Consensus 569 ~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip~~~~~ 648 (679)
++.|+|||||.++++.-+++ ++....-++|+-.+.+| ..|. +..|..++ ....+..+|.+|++.+.
T Consensus 135 R~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~dP~g--~~i~-------~~~~~~t~---~~G~~~~~f~Lp~~~~~ 200 (1661)
T 2b39_A 135 KTIYTPGSTVLYRVFTVDHK--LLPVGQTVFITIETPDG--IPVK-------RDSKSSQN---QFGILTLSWNIPELVNM 200 (1661)
T ss_dssp CSEECTTSEEEEEEEEECTT--SCCCCCCEEEEEEETTE--EEEE-------EEEECTTT---TTSCCEEEEECCSSCCC
T ss_pred CCccCCCCEEEEEEEEECCC--CcccCceEEEEEECCCC--CEEe-------eeeecccc---cCCeEeeeeeCCCCccc
Confidence 45899999999888876643 33222335666555443 2221 22333211 12245679999999999
Q ss_pred cceeEEEee
Q 005752 649 GVYRIRHFG 657 (679)
Q Consensus 649 G~YRi~~~G 657 (679)
|+|+|+-.-
T Consensus 201 G~w~I~v~~ 209 (1661)
T 2b39_A 201 GVWKIKAYY 209 (1661)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEe
Confidence 999999863
No 14
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=35.69 E-value=56 Score=28.79 Aligned_cols=48 Identities=8% Similarity=0.198 Sum_probs=36.4
Q ss_pred EEEEEECCEEEEecCCccchHHHHHHHHHHHHHhhhcCCCCCCceEEEEeccC
Q 005752 427 IQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTN 479 (679)
Q Consensus 427 vq~lriG~l~iv~vPgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~vvv~GlsN 479 (679)
+.++++++..++.+.||+.......|++.+.+.+.. .....+|.=+++
T Consensus 5 ~pii~~~~vlvv~l~G~lD~~~a~~l~~~ll~~i~~-----~~~~~vIlDlsg 52 (123)
T 3zxn_A 5 VPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITG-----VAGKGLVIDISA 52 (123)
T ss_dssp SCEEEETTEEEEECCCCC-CHHHHHHHHHHHHHHTS-----SCCSEEEEECTT
T ss_pred ccEEEECCEEEEEEeEeeCHHHHHHHHHHHHHHHHh-----cCCCEEEEEcCC
Confidence 456889999999999999999999999998877654 234556655553
No 15
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=34.69 E-value=51 Score=41.92 Aligned_cols=81 Identities=10% Similarity=0.119 Sum_probs=49.4
Q ss_pred cceeecCCCCccccCCCeEEEEEEccCCCCCCCCCCCeEEEEEEeCCCCeEEEecCCCceeEEEEecCCCCCceeEEE-E
Q 005752 560 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMAT-I 638 (679)
Q Consensus 560 Gdv~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~d~~t~~~W~r~~~~~~~s~~~-i 638 (679)
+.+.-|-+ ++.|+|||||.++...-++.... ...+ ++|+-.+.+| ....+|.-.. ....+. .
T Consensus 124 ~~~fiqTD-R~iYrPGqtV~~r~i~~d~~~~p-~~~~-v~v~l~dP~G-----------~~i~~~~~~~---~~G~~~~~ 186 (1676)
T 3cu7_A 124 GFLFIHTD-KPVYTPDQSVKVRVYSLNDDLKP-AKRE-TVLTFIDPEG-----------SEVDMVEEID---HIGIISFP 186 (1676)
T ss_dssp SEEEEEES-CSEECTTCEECEEEEEECTTCSC-CCCC-EEEEEEETTT-----------EECCCEEECC---SSSEEECC
T ss_pred CcEEEECC-CCccCCCCEEEEEEEEECCCCcc-cccc-eEEEEECCCC-----------CEEEEEeeec---CCCceecc
Confidence 44444433 45899999999888765543211 2222 4455444443 3333443221 233567 7
Q ss_pred EEEcCCCCCCcceeEEEee
Q 005752 639 EWRIPDTAPLGVYRIRHFG 657 (679)
Q Consensus 639 ~W~ip~~~~~G~YRi~~~G 657 (679)
++.+|++.+.|+|+|+-.-
T Consensus 187 ~f~Lp~~~~~G~w~I~v~~ 205 (1676)
T 3cu7_A 187 DFKIPSNPRYGMWTIKAKY 205 (1676)
T ss_dssp CEECCSSCCCEEEEEEEEB
T ss_pred eeeCCCCccccceEEEEEe
Confidence 9999999999999999864
No 16
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=31.57 E-value=42 Score=31.27 Aligned_cols=43 Identities=16% Similarity=0.184 Sum_probs=25.3
Q ss_pred EEEEeCCCCeEEEe---cCCCceeEEEEecCCCCCceeEEEEEEEcCCCCCCcceeEEEe-ecc
Q 005752 600 VEILHGKDIWAPAY---DDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHF-GAA 659 (679)
Q Consensus 600 Ver~~~~~~W~~v~---~D~d~~t~~~W~r~~~~~~~s~~~i~W~ip~~~~~G~YRi~~~-G~~ 659 (679)
+.|++.+|.|+.++ ||+|=-+ . .|-.+++..+|+|||++. |+|
T Consensus 52 L~~~~~~~~~~~l~~~~Td~DGR~----------------~-~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 52 VFRKAADDTWEPFASGKTSESGEL----------------H-GLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp EEEECTTSCEEEEEEEECCTTSEE----------------C-CSCCTTTCCSEEEEEEECHHHH
T ss_pred EEEECCCCCeEEEEEEEeCCCCCC----------------C-CCCCccccCCceEEEEEEHHHH
Confidence 35666677888764 5555321 1 232344567899999863 444
No 17
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=30.12 E-value=51 Score=29.08 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=35.1
Q ss_pred EEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 005752 34 VFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (679)
Q Consensus 34 v~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~ 80 (679)
+.+.+-..+-+..-..+|+++|++.++ .+.+.|+|-.-.||-|-+
T Consensus 27 ~~~~v~Hpg~~tpsk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 27 IYFEIYHPGEPTPSRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp EEEEEECTTSCCCCHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 333333333344457899999999999 899999999999999987
No 18
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=29.95 E-value=39 Score=28.85 Aligned_cols=25 Identities=24% Similarity=0.518 Sum_probs=18.0
Q ss_pred eEEEEEEEcCCCCCC--cceeEEEeec
Q 005752 634 SMATIEWRIPDTAPL--GVYRIRHFGA 658 (679)
Q Consensus 634 s~~~i~W~ip~~~~~--G~YRi~~~G~ 658 (679)
+.+++.|..|.+... -.|||+|++.
T Consensus 22 ~Sv~LsW~~p~~~~~~i~~Y~v~~~~~ 48 (104)
T 2dle_A 22 TSLTLIWKVSDNESSSNYTYKIHVAGE 48 (104)
T ss_dssp SCEEEEEEESCSTTCCSCEEEEEEECS
T ss_pred CEEEEEEcCCCCCCCceEEEEEEEECC
Confidence 458999998764322 2599999875
No 19
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=28.90 E-value=62 Score=27.88 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=36.6
Q ss_pred EEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 005752 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (679)
Q Consensus 23 lvl~~~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nViIsaTHT 75 (679)
+++.. ...++++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 48 ~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred eEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 44543 35688999998775 5554 55677777888899 9999999986543
No 20
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=28.76 E-value=56 Score=28.50 Aligned_cols=35 Identities=23% Similarity=0.147 Sum_probs=31.1
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 005752 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (679)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~ 80 (679)
+..-..+|+++|++.++ .+.+.|+|-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp SCCCHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 33446899999999999 899999999999999987
No 21
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=28.52 E-value=64 Score=27.65 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=37.0
Q ss_pred EEEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 005752 22 TFIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (679)
Q Consensus 22 Alvl~~~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nViIsaTHT 75 (679)
.+++.. ....+++|.+.+.+ ...+ +..++-+.|++.+| ++.++|.|.-+-.
T Consensus 46 ~~~~~g-~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 46 QLSFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEEETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred cEEecC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 345544 35788999998775 5544 55677777888899 9999999986543
No 22
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=26.76 E-value=60 Score=28.39 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 005752 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (679)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~ 80 (679)
+..-+.+|+++|++.|+ .+.+.|+|-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CCCCHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 34446899999999999 899999999999999987
No 23
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=26.63 E-value=1e+02 Score=30.49 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=32.9
Q ss_pred EEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 005752 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (679)
Q Consensus 20 ARAlvl~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHS 77 (679)
+.++++.+ ++.+ |.+|..+ .....+++.+.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~--~~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRD--GGRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEE--TTEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEE--CCEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 56777776 3444 3467764 56667788888888777 6655555 578875
No 24
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=24.14 E-value=76 Score=27.48 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=36.8
Q ss_pred EEEEEeCCCCEEEEEEeccCcc-cH----HHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 005752 22 TFIVAEPQGNRVVFVNLDACMA-SQ----IVKIKVIERLKARYGDLYTEKNVAISGI 73 (679)
Q Consensus 22 Alvl~~~~~~rvv~Vs~Dl~~i-~~----~v~~~V~~~L~~~~G~~i~~~nViIsaT 73 (679)
.|.+.. ...+.+++.+-.++. .. .+..++-+.|++++| ++.++|.|.-.
T Consensus 46 ~m~fgG-s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG-SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC-cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 455543 367899999998765 33 455677888889999 99999999754
No 25
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=23.09 E-value=68 Score=28.23 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=33.0
Q ss_pred CCEEEEEEeccCc-cc----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 005752 30 GNRVVFVNLDACM-AS----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (679)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~----~~v~~~V~~~L~~~~G~~i~~~nViIsaTHT 75 (679)
...+++|.+.+.+ .. ..+..++-+.|++.+| ++.++|.|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4678999998775 33 3577788888899999 9999999987644
No 26
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=22.52 E-value=1.2e+02 Score=29.72 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=34.6
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeec
Q 005752 19 RARTFIVAEPQGNRVVFVNLDACMASQ--IVKIKVIERLKARYGDLYTEKNVAISGIH 74 (679)
Q Consensus 19 ~ARAlvl~~~~~~rvv~Vs~Dl~~i~~--~v~~~V~~~L~~~~G~~i~~~nViIsaTH 74 (679)
.+||+|+... ..-.+-..+ .-..++.+.+++.+| +++++|++++|=
T Consensus 89 ~~rAvvvNSG--------nANA~TG~~G~~da~~~a~~~A~~lg--i~~~~VlvaSTG 136 (208)
T 1vra_A 89 KLQAMIVNSG--------IANACTGKRGLDDAYTMRAVGAETFH--IPEHYVAVTSTG 136 (208)
T ss_dssp EEEEEEEEEE--------ECCCSCHHHHHHHHHHHHHHHHHHHT--SCGGGEEEEEEE
T ss_pred ceEEEEEccC--------CccccccHHHHHHHHHHHHHHHHHhC--CChhHEEEeCCc
Confidence 5788888773 344454433 345588899999999 999999999984
No 27
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=22.09 E-value=3.6e+02 Score=24.11 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeec---cCCCCCCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceEE
Q 005752 47 VKIKVIERLKARYGDLYTEKNVAISGIH---THAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSI 123 (679)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nViIsaTH---THSgP~g~~~~~~~~i~~~g~~~~y~~~lvd~iv~AI~~A~~~l~Pa~l 123 (679)
+...+.+.|++.++ .+.+++-|-..+ -|.| .++ .+..+.-.|-.++--+.++..|.+++.++....+-+.+
T Consensus 32 lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~~M---P~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~V 105 (122)
T 1u9d_A 32 LVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-GVY---PMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLAV 105 (122)
T ss_dssp HHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-CCC---CEEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred HhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-CCC---CEEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 44566677788888 899998765544 4556 211 12222222457788889999999999998544445555
Q ss_pred EEEEEE
Q 005752 124 FVNKGE 129 (679)
Q Consensus 124 ~~g~g~ 129 (679)
-+..-.
T Consensus 106 if~el~ 111 (122)
T 1u9d_A 106 VFIPLQ 111 (122)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 554433
No 28
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=21.33 E-value=53 Score=28.55 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=31.5
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 005752 43 ASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (679)
Q Consensus 43 i~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~ 80 (679)
-...-..+|+++|++.++ .+.+.|+|-.-.||-|-+
T Consensus 28 ~~tpsk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 28 SRTPSREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp TSCCCHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 334456899999999999 899999999999999987
No 29
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=20.87 E-value=69 Score=28.87 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=36.4
Q ss_pred CCEEEEEEeccCccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 005752 30 GNRVVFVNLDACMAS-----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (679)
Q Consensus 30 ~~rvv~Vs~Dl~~i~-----~~v~~~V~~~L~~~~G~~i~~~nViIsaTHT 75 (679)
..++++|.+-.++.- ..+..++-+.|++++| |+.++|.|.-+=.
T Consensus 75 ~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 75 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 578899999977643 3677788889999999 9999999987766
No 30
>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str}
Probab=20.50 E-value=1.1e+02 Score=26.89 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccch
Q 005752 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYV 86 (679)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~g~~~~~ 86 (679)
+.++|+++|.+.+. +..=-++--+|-|++|.|.-.++
T Consensus 10 ~~~~I~~~L~~~l~---p~~l~V~d~S~~H~~~~G~gsHf 46 (107)
T 2dhm_A 10 IRERIEEKLRAAFQ---PVFLEVVDESYRHNVPAGSESHF 46 (107)
T ss_dssp HHHHHHHHHHHHTC---CSCCEEEECCCCCSSCCCSCCCE
T ss_pred HHHHHHHHHHhcCC---CcEEEEEECcccccCCCCCCceE
Confidence 35889999988765 33344556899999998764433
No 31
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=20.41 E-value=97 Score=28.91 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=33.2
Q ss_pred eccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 005752 38 LDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (679)
Q Consensus 38 ~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHSgP~ 80 (679)
+-..+-...-..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 25 V~Hpg~aTpSk~eIrekLAkmy~--~~~d~VvV~g~rT~fGgg 65 (149)
T 2xzm_P 25 VLHPDSPTASKEKIREELAKQLK--VDARNVVVYGFSTQYGGG 65 (149)
T ss_dssp EECSSSCSCCHHHHHHHHHHHHT--CCGGGEEEEEECCCSSSS
T ss_pred EEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 33333334446799999999999 899999999999999987
No 32
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=20.00 E-value=3.9e+02 Score=22.57 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCCCc-cchhhhccc-cccchhHHHHHHHHHHHHHHHHHhcCCc
Q 005752 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYL-QYVVYIVTS-LGFVRQSFDALVDGIEKSVLQAHENLRP 120 (679)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nViIsaTHTHS-gP~g~~-~~~~~~i~~-~g~~~~y~~~lvd~iv~AI~~A~~~l~P 120 (679)
...+.+++-+.|++.+| .|++.+++.-..... .++|.. ...+.++.. .|..++--+.+...|.+++.+.+ ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLG--KPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNL-GIPA 92 (115)
T ss_dssp HHHHHHHHHHHHHHHHT--CCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--CChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 45677788888899999 999988888543221 223322 112223332 34667777888888888887766 5556
Q ss_pred eEEEEEEEEec
Q 005752 121 GSIFVNKGELL 131 (679)
Q Consensus 121 a~l~~g~g~~~ 131 (679)
-++.+.-.+..
T Consensus 93 ~~v~I~~~e~~ 103 (115)
T 2xcz_A 93 DRIYIGFEDVP 103 (115)
T ss_dssp GGEEEEEEECC
T ss_pred ccEEEEEEECC
Confidence 55555544443
Done!