Citrus Sinensis ID: 005752

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------68
MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYIQEFKKLASALLSGQPVELGPQPPDLLDKQISFLTPVVMDSTPIGVNFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHFGAAKSLLGSTRHFTGSSSAFVVA
cccccccccccccccccEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEEECccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccCEEEEEEEEEccccccccHHHHHcccHHHccccccccccccEEEEEEcccccCEEEEEEEECccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcEEEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccHHHHHHHHcccccEECccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEECccccccccccccEEEEEEEcccccccccccccEEEEEEEcccccEEEEEccccccEEEEEEccccccccEEEEEEEEcccccccccEEEEEEcccccccccEEEEEECcccEEEc
*MG*****QIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAA********AATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYIQEFKKLASALLSGQ*********DLLDKQISFLTPVVMDSTPIGVNFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHFGAAKSLLGSTRHFTGSSSAFVVA
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MMGYANMEQIASGIHFRLRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDKEMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDFRNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCGGKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMGFAFAAGTTDGPGAFDFTQGDDKPSILPIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYIQEFKKLASALLSGQPVELGPQPPDLLDKQISFLTPVVMDSTPIGVNFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHFGAAKSLLGSTRHFTGSSSAFVVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Neutral ceramidase Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. Uses ceramide instead of phytoceramide as substrate.probableQ0JL46
Neutral ceramidase B Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.probableQ55G11
Neutral ceramidase Catalyzes the cleavage of the N-acyl linkage of the ceramides (Cers) to yield sphingosine (Sph) and free fatty acid. Also catalyzes the synthesis of Cers from Sph and fatty acid. Cers containning C6-C24 fatty acids are well hydrolyzed, and Cers with mono unsaturated fatty acids are much more hydrolyzed than those with saturated fatty acids.probableO06769

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.5.-.-Acting on carbon-nitrogen bonds, other than peptide bonds.probable
3.5.1.-11-cis-retinol dehydrogenase.probable
3.5.1.23Ceramidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZXC, chain A
Confidence level:confident
Coverage over the Query: 1-221
View the alignment between query and template
View the model in PyMOL
Template: 2ZXC, chain A
Confidence level:confident
Coverage over the Query: 1-221
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
2zws, chain Avery confident Alignment | Template Structure