Citrus Sinensis ID: 005756

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------68
MGNGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVHTEYYHHPTTAAATTTNTVVQTATFFSSISGASVSANTSTQTLSTALIDYSWPYSSNSATFESSDSFASLPLQPVPRRSFQSGSGSSTSGPIERGFLSGPIERGYLSGPIDRGLYSGPITDKLQRNSSQNGINSKSKSKKQGLLKIFKRAISKTISRGMMINNNKSSQGAKDLESERNNNETGSDRLSSRASLNNENGVVVTDDDDGEFCSMKSQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRSSV
ccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEEEcccccccccccccHHcccccccccccccccccccccccEEEEcccccccccHHHHHHHHHcccccccEEEccccccccccccccccccccccccHHHHHHHHHcccccccccEEEEEEEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHccccccccccccccEEEEEEEcccccccccc
cccccEEEEEcccccccccccEEEEccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHcccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEcccEEEEEcccccEEEEEEcccccccccccccHHccccccccccHHcccccccccccEEEEEEcccccccHHHHHHHHHHHccccccEEEEcEEEEEEEEEEcccccEcccccccHHHHHHccccccccccEEEEccEEEEEEcccccEEEEEEcccHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccEEEEEEEEccccccccc
mgngigkfghcfvgevtsrHEIAVIMgdplreglghsfcyirpdpprlsasssskvhteyyhhpttaaatttnTVVQTATFFssisgasvsantsTQTLSTALidyswpyssnsatfessdsfaslplqpvprrsfqsgsgsstsgpiergflsgpiergylsgpidrglysgpitdklqrnssqnginskskskKQGLLKIFKRAISKTISrgmminnnkssqgakdlesernnnetgsdrlssraslnnengvvvtddddgefcsmksqnlqwaqgkagedrMQIVVSEERGWVFVGiydgfngpdapdylinnlYPAVHKELKGllwndklessssdetqkeifpldddskrkmkgnsnegiVKKCVGFAWDREKLELERKLncegsnglndIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEdvylmnvgdsravlgwkfepniglgkagrdlkrineetmhdhealdgddldrfnnltslqlttdhstheEEEVRRIknehpdddsavmnDRVKGYLKVTRAfgagflkqpkwNDALLEMFRINyigtspyitcnpsvyhhrlnprdkflilssdglyqyftsEEAVSEVESFLaafpegdpaQHLIEEVLFRAAKKAGmdfhelldipqgdrriyhddVSVIIISLEgriwrssv
MGNGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVHTEYYHHpttaaatttnTVVQTATFFSSISGASVSANTSTQTLSTALIDYSWPYSSNSATFESSDSFASLPLQPVPRRSfqsgsgsstsgpieRGFLSGPIERGYLSGPIDRGLYSGPITdklqrnssqnginskskskkqglLKIFKRAIsktisrgmminnnkssqgakdlesernnnetgsdrlssraslnnengvVVTDDDDGEFCSMKSQnlqwaqgkageDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKlessssdetqkeifpldddskrkmkgnsnegivkkcvgfAWDREKLELERKLNcegsnglnDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAvlgwkfepniglgkagrdLKRINEETMHDhealdgddlDRFNNLTSLqlttdhstheeeevrriknehpdddsavmnDRVKGYLKVTRafgagflkqpkWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLdipqgdrriyhDDVSVIIIslegriwrssv
MGNGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVHTEYYHHPttaaatttntvvqtatFFSSISGASVSANTSTQTLSTALIDYSWPYSSNSATFESSDSFASLPLQPVPRRSFQsgsgsstsgPIERGFLSGPIERGYLSGPIDRGLYSGPITDKLQRNSSQNGINskskskkQGLLKIFKRAISKTISRGMMINNNKSSQGAKDLESERNNNETGSDRLSSRASLNNENGVVVTDDDDGEFCSMKSQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRSSV
****IGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIR****************EYYHHPTTAAATTTNTVVQTATFFSSISGASV*****TQTLSTALIDYSWPY*************************************************GYLSGPI***L*****************************LKIFKRAI******************************************************************QWA*****EDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWN********************************GIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQ********YLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGR************************************************************DRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIW****
**NGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDP**********************************TFFSSISGASVSANTSTQTLSTALIDYSWPYSS*************L**************************************************************************************************************************************************************MQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWN**************IFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEG*****DIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNI***********INEETMHDHEALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLA******PAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRS**
MGNGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPR***********EYYHHPTTAAATTTNTVVQTATFFSSISGASVSANTSTQTLSTALIDYSWPYSSNSATFESSDSFASLPLQPVPR*************PIERGFLSGPIERGYLSGPIDRGLYSGPITDKLQR***************QGLLKIFKRAISKTISRGMMINNNK************************RASLNNENGVVVTDDDDGEFCSMKSQNL**********RMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKL*********KEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLT*************IKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRSSV
**NGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDP**********************************TFFSSISGASVSANTSTQTLSTALIDYSWPY**********DSFASLPLQPVPRRSFQSGSGSSTS*PIERGFLSGPIERGYLSGPIDRGLYS***************************LKIFKRA**KT*******************************************************CSMKSQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFE*******************MHDHEALD*DDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRI*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGNGIGKFGHCFVGEVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVHTEYYHHPTTAAATTTNTVVQTATFFSSISGASVSANTSTQTLSTALIDYSWPYSSNSATFESSDSFASLPLQPVPRRSFQSGSGSSTSGPIERGFLSGPIERGYLSGPIDRGLYSGPITDKLQRNSSQNGINSKSKSKKQGLLKIFKRAISKTISRGMMINNNKSSQGAKDLESERNNNETGSDRLSSRASLNNENGVVVTDDDDGEFCSMKSQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRSSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query679 2.2.26 [Sep-21-2011]
Q9LQN6662 Probable protein phosphat yes no 0.933 0.957 0.570 0.0
Q9ZV25654 Probable protein phosphat no no 0.932 0.967 0.572 0.0
Q9LZ86674 Probable protein phosphat no no 0.941 0.948 0.529 0.0
Q9SR24650 Probable protein phosphat no no 0.936 0.978 0.507 1e-166
Q84T94639 Protein phosphatase 2C 35 yes no 0.864 0.918 0.490 1e-160
Q10NB9631 Probable protein phosphat no no 0.895 0.963 0.418 1e-132
Q6ZGY0596 Probable protein phosphat no no 0.836 0.953 0.394 1e-116
A3AZ89593 Putative protein phosphat no no 0.530 0.607 0.504 1e-111
Q8RWN7856 Protein phosphatase 2C 32 no no 0.415 0.329 0.550 9e-93
O82302783 Protein phosphatase 2C 29 no no 0.400 0.347 0.577 2e-90
>sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1 Back     alignment and function desciption
 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/707 (57%), Positives = 508/707 (71%), Gaps = 73/707 (10%)

Query: 1   MGNGIGKFGHCFVG---EVTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVH 57
           MGNG+ K   CF G   E     +I+V++ DPL EGLGHSFCY+RPDP  +S   SSKVH
Sbjct: 1   MGNGVTKLSICFTGGGGERLRPKDISVLLPDPLDEGLGHSFCYVRPDPTLIS---SSKVH 57

Query: 58  TEYYHHPTTAAATTTNTVVQTATFFSSISGASVSANTSTQTLSTALIDYSWPYS--SNSA 115
           +E                  T T F +ISGASVSANT+T  LST+L D   PY     +A
Sbjct: 58  SEED---------------TTTTTFRTISGASVSANTAT-PLSTSLYD---PYGHIDRAA 98

Query: 116 TFESSDSFASLPLQPVPRRSFQSGSGSSTSGPIERGFLSGPIERGYLSGPIDR-GLYSGP 174
            FES+ SF+S+PLQP+P+    SG     SGPIERGFLSGPIERG++SGP+DR GL+SGP
Sbjct: 99  AFESTTSFSSIPLQPIPK---SSGPIVLGSGPIERGFLSGPIERGFMSGPLDRVGLFSGP 155

Query: 175 ITD-------KLQRNSSQNGINSKSKSKKQGLLKIFKRAISKTISRGMMINNNKSSQGAK 227
           +         + QR+ S +G+  +  S+K+ L++I +RAISKT+SRG        +    
Sbjct: 156 LDKPNSDHHHQFQRSFS-HGLALRVGSRKRSLVRILRRAISKTMSRGQ-------NSIVA 207

Query: 228 DLESERNNNETGSDRLSSRASLNNENGVV--------VTDDDDGEFCSMKSQNLQWAQGK 279
            ++S ++++  G     SR +L+NEN  V        V+ DDD    S+++QNLQWAQGK
Sbjct: 208 PIKSVKDSDNWGIRSEKSR-NLHNENLTVNSLNFSSEVSLDDD---VSLENQNLQWAQGK 263

Query: 280 AGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWND-KLESSS 338
           AGEDR+ +VVSEE GW+FVGIYDGFNGPDAPDYL+++LYP VH+ELKGLLW+D  +ES S
Sbjct: 264 AGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKS 323

Query: 339 SDETQKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCE-----GSNGL 393
            D  +       D+S    + +       +C    WDRE  +L+R+L  +     GS+ L
Sbjct: 324 QDLERSN----GDESCSNQEKDETCERWWRC---EWDRESQDLDRRLKEQISRRSGSDRL 376

Query: 394 NDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGD 453
            + HS+VL+ALSQAL+KTE++YL+TADKM+ ENPELALMGSCVLVMLMKGED+Y+MNVGD
Sbjct: 377 TN-HSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGD 435

Query: 454 SRAVLGWKFEPNIGLGKAGRDLKRINEETM-HDHEALDGDDLDRFNNLTSLQLTTDHSTH 512
           SRAVLG K EP+  L K  +DL+RINEETM +D E  +GD      NL++ QLT DHST+
Sbjct: 436 SRAVLGQKSEPDYWLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTN 495

Query: 513 EEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTS 572
            EEEV RI+NEHPDD +AV N+RVKG LKVTRAFGAGFLKQPKWN+ALLEMF+I+Y+G S
Sbjct: 496 IEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKS 555

Query: 573 PYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEE 632
           PYI C PS+YHHRL  +D+FLILSSDGLYQYFT+EEAVSEVE F+   PEGDPAQHL++E
Sbjct: 556 PYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQE 615

Query: 633 VLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRIWRSSV 679
           +LFRAAKKAGMDFHELL+IPQG+RR YHDDVS+++ISLEGR+W+S V
Sbjct: 616 LLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVISLEGRMWKSCV 662
Involved in leaf development regulation.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZ86|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SR24|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1 Back     alignment and function description
>sp|Q84T94|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 Back     alignment and function description
>sp|Q10NB9|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 Back     alignment and function description
>sp|A3AZ89|P2C46_ORYSJ Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2 Back     alignment and function description
>sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 Back     alignment and function description
>sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query679
359478956692 PREDICTED: probable protein phosphatase 0.941 0.923 0.612 0.0
225434963677 PREDICTED: probable protein phosphatase 0.936 0.939 0.609 0.0
224104441670 predicted protein [Populus trichocarpa] 0.942 0.955 0.599 0.0
449450728691 PREDICTED: probable protein phosphatase 0.944 0.927 0.606 0.0
224054746667 predicted protein [Populus trichocarpa] 0.936 0.953 0.601 0.0
359481783677 PREDICTED: probable protein phosphatase 0.933 0.936 0.599 0.0
255583129697 protein phosphatase 2c, putative [Ricinu 0.946 0.922 0.594 0.0
449450726715 PREDICTED: probable protein phosphatase 0.944 0.896 0.586 0.0
365222916708 Hop-interacting protein THI109 [Solanum 0.933 0.895 0.573 0.0
255587033702 protein phosphatase 2c, putative [Ricinu 0.949 0.918 0.565 0.0
>gi|359478956|ref|XP_003632194.1| PREDICTED: probable protein phosphatase 2C 23-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/732 (61%), Positives = 524/732 (71%), Gaps = 93/732 (12%)

Query: 1   MGNGIGKFGHCFVGE--VTSRHEIAVIMGDPLREGLGHSFCYIRPDPPRLSASSSSKVHT 58
           MGNG  K   CF GE     R +I+V++ DPL EGLGHSFCYIRPD  RLS   SSKVH+
Sbjct: 1   MGNGFAKLSICFTGEGGARRRQDISVLISDPLDEGLGHSFCYIRPDQSRLS---SSKVHS 57

Query: 59  EYYHHPTTAAATTTNTVVQTATFFSSISGASVSANTSTQTLSTALID-YSWPYSSNSATF 117
           E          TTT         F SISGASVSANTST  LSTA +D YS+     ++ F
Sbjct: 58  E---------ETTT---------FRSISGASVSANTST-PLSTAFVDLYSYNSIDRASAF 98

Query: 118 ESSDSFASLPLQPVPRRSFQSG------SGSSTSGPIERGFLSGPIERGYLSGPIDRGLY 171
           ESS SF S+PLQP+PR    SG       G   SGP+ERGFLSGPIERG++SGPIDRGL+
Sbjct: 99  ESSTSFTSIPLQPIPRNWMNSGPIPGSYGGIPGSGPLERGFLSGPIERGFMSGPIDRGLF 158

Query: 172 SGPI----TDKLQRNSSQNGINSKSKSKKQGLLKIFKRAISKTISRGM--MINNNKSSQG 225
           SGP+    TD+ QR+ S  G   + +S+K  L+++ +RAISKTISRG   ++   K    
Sbjct: 159 SGPLEKSSTDQFQRSYSHGGFAFRPRSRKGSLIRVLQRAISKTISRGQNSIVAPIKGVVS 218

Query: 226 AKD----LESERNNNE--TGSDRLSSRASLNNENGVVVTDDDDGEFCSMKSQNLQWAQGK 279
            K+    + SE++N      S  LSS  SL         +DDD    S++SQNLQWAQGK
Sbjct: 219 VKEPDWLVGSEKHNENLTVSSVNLSSDGSL---------EDDD----SLESQNLQWAQGK 265

Query: 280 AGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLES--- 336
           AGEDR+ +VVSEE GWVFVGIYDGFNGPDAPDYL++NLY AVHKELKGLLW+DK ES   
Sbjct: 266 AGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSAVHKELKGLLWDDKHESNPV 325

Query: 337 ---SSSDETQKEIFP-------LDDDSKRKMKGNSN---EGIVKK---------CVGFAW 374
              +SS  + +E +P        D +SKRK   NS    +G  KK         C    W
Sbjct: 326 AAPASSPCSYQEYYPSGSGDVKFDSNSKRKKGKNSKNKYKGAAKKWEENQRRWKC---EW 382

Query: 375 DREKLELERKL-------NCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENP 427
           DRE+LEL+R+L       N +GS  +N  HSDVLKALSQAL+KTE+SYLE ADKMVMENP
Sbjct: 383 DRERLELDRRLKEQLNGSNTDGSRSIN--HSDVLKALSQALRKTEESYLEIADKMVMENP 440

Query: 428 ELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHE 487
           ELALMGSCVLVMLMKGEDVY+MNVGDSRAVL  K E ++ LGK  +DL+RINEET+HD E
Sbjct: 441 ELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEADVWLGKIRQDLERINEETLHDLE 500

Query: 488 ALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFG 547
           A+D D+ +    L++ QLT DHST  EEEVRRIKNEHPDD  AVMNDRVKG LKVTRAFG
Sbjct: 501 AMDNDNSNMIPTLSAFQLTVDHSTSVEEEVRRIKNEHPDDACAVMNDRVKGSLKVTRAFG 560

Query: 548 AGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSE 607
           AGFLKQPKWN+ALLEMFRI+Y+GTSPYI+C PS+YHHRL P D+FLILSSDGLYQY T+E
Sbjct: 561 AGFLKQPKWNNALLEMFRIDYVGTSPYISCLPSLYHHRLGPEDRFLILSSDGLYQYLTNE 620

Query: 608 EAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVII 667
           EAVSEVE F+A  P+GDPAQHL+EEVLFRAAKKAGMDFHELL+IPQGDRR YHDDVS+I+
Sbjct: 621 EAVSEVELFIALSPDGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIV 680

Query: 668 ISLEGRIWRSSV 679
           ISLEG IWRS V
Sbjct: 681 ISLEGMIWRSCV 692

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434963|ref|XP_002283914.1| PREDICTED: probable protein phosphatase 2C 23-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224104441|ref|XP_002313436.1| predicted protein [Populus trichocarpa] gi|222849844|gb|EEE87391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449450728|ref|XP_004143114.1| PREDICTED: probable protein phosphatase 2C 4-like isoform 2 [Cucumis sativus] gi|449496677|ref|XP_004160196.1| PREDICTED: probable protein phosphatase 2C 4-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224054746|ref|XP_002298358.1| predicted protein [Populus trichocarpa] gi|222845616|gb|EEE83163.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359481783|ref|XP_002270358.2| PREDICTED: probable protein phosphatase 2C 4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255583129|ref|XP_002532331.1| protein phosphatase 2c, putative [Ricinus communis] gi|223527974|gb|EEF30058.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449450726|ref|XP_004143113.1| PREDICTED: probable protein phosphatase 2C 4-like isoform 1 [Cucumis sativus] gi|449496673|ref|XP_004160195.1| PREDICTED: probable protein phosphatase 2C 4-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|365222916|gb|AEW69810.1| Hop-interacting protein THI109 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|255587033|ref|XP_002534107.1| protein phosphatase 2c, putative [Ricinus communis] gi|223525839|gb|EEF28275.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query679
TAIR|locus:2026605662 PLL5 "pol-like 5" [Arabidopsis 0.848 0.870 0.584 1.2e-190
TAIR|locus:2053265654 PLL4 "poltergeist like 4" [Ara 0.842 0.874 0.589 1e-189
TAIR|locus:2180152674 PLL2 "pol-like 2" [Arabidopsis 0.942 0.949 0.535 1.1e-167
TAIR|locus:2083539650 PLL3 "pol-like 3" [Arabidopsis 0.829 0.866 0.524 7.8e-142
TAIR|locus:2041444856 POL "poltergeist" [Arabidopsis 0.301 0.239 0.594 4.4e-137
TAIR|locus:2062481783 PLL1 "poltergeist like 1" [Ara 0.405 0.351 0.583 9.3e-125
TAIR|locus:2089293493 AT3G16560 [Arabidopsis thalian 0.262 0.361 0.435 7.4e-72
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.245 0.434 0.352 6.9e-38
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.269 0.482 0.333 1.2e-35
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.268 0.473 0.340 1.7e-35
TAIR|locus:2026605 PLL5 "pol-like 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1707 (606.0 bits), Expect = 1.2e-190, Sum P(2) = 1.2e-190
 Identities = 361/618 (58%), Positives = 461/618 (74%)

Query:    82 FSSISGASVSANTSTQTLSTALIDYSWPYS--SNSATFESSDSFASLPLQPVPRRSFQXX 139
             F +ISGASVSANT+T  LST+L D   PY     +A FES+ SF+S+PLQP+P+ S    
Sbjct:    67 FRTISGASVSANTATP-LSTSLYD---PYGHIDRAAAFESTTSFSSIPLQPIPKSS---G 119

Query:   140 XXXXXXXPIERGFLSGPIERGYLSGPIDR-GLYSGPI----TD---KLQRNSSQNGINXX 191
                    PIERGFLSGPIERG++SGP+DR GL+SGP+    +D   + QR+ S +G+   
Sbjct:   120 PIVLGSGPIERGFLSGPIERGFMSGPLDRVGLFSGPLDKPNSDHHHQFQRSFS-HGLALR 178

Query:   192 XXXXXQGLLKIFKRAISKTISRGM--MINNNKSSQGAKD--LESERNNNETGSDRLSSRA 247
                  + L++I +RAISKT+SRG   ++   KS + + +  + SE++ N   ++ L+   
Sbjct:   179 VGSRKRSLVRILRRAISKTMSRGQNSIVAPIKSVKDSDNWGIRSEKSRN-LHNENLTVN- 236

Query:   248 SLNNENGVVVTDDDDGEFCSMKSQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGP 307
             SLN  + V + DD      S+++QNLQWAQGKAGEDR+ +VVSEE GW+FVGIYDGFNGP
Sbjct:   237 SLNFSSEVSLDDD-----VSLENQNLQWAQGKAGEDRVHVVVSEEHGWLFVGIYDGFNGP 291

Query:   308 DAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVK 367
             DAPDYL+++LYP VH+ELKGLLW+D    S S + ++     D+    + K  + E   +
Sbjct:   292 DAPDYLLSHLYPVVHRELKGLLWDDSNVESKSQDLERSNG--DESCSNQEKDETCERWWR 349

Query:   368 KCVGFAWDREKLELERKLNCE-----GSNGLNDIHSDVLKALSQALKKTEDSYLETADKM 422
              C    WDRE  +L+R+L  +     GS+ L + HS+VL+ALSQAL+KTE++YL+TADKM
Sbjct:   350 -C---EWDRESQDLDRRLKEQISRRSGSDRLTN-HSEVLEALSQALRKTEEAYLDTADKM 404

Query:   423 VMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEET 482
             + ENPELALMGSCVLVMLMKGED+Y+MNVGDSRAVLG K EP+  L K  +DL+RINEET
Sbjct:   405 LDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEET 464

Query:   483 M-HDHEALDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLK 541
             M +D E  +GD      NL++ QLT DHST+ EEEV RI+NEHPDD +AV N+RVKG LK
Sbjct:   465 MMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLK 524

Query:   542 VTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLY 601
             VTRAFGAGFLKQPKWN+ALLEMF+I+Y+G SPYI C PS+YHHRL  +D+FLILSSDGLY
Sbjct:   525 VTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLY 584

Query:   602 QYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHD 661
             QYFT+EEAVSEVE F+   PEGDPAQHL++E+LFRAAKKAGMDFHELL+IPQG+RR YHD
Sbjct:   585 QYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHD 644

Query:   662 DVSVIIISLEGRIWRSSV 679
             DVS+++ISLEGR+W+S V
Sbjct:   645 DVSIVVISLEGRMWKSCV 662
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0048366 "leaf development" evidence=IMP
GO:0005886 "plasma membrane" evidence=IDA
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0007154 "cell communication" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0048527 "lateral root development" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2053265 PLL4 "poltergeist like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180152 PLL2 "pol-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083539 PLL3 "pol-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062481 PLL1 "poltergeist like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LQN6P2C04_ARATH3, ., 1, ., 3, ., 1, 60.57000.93370.9577yesno
Q84T94P2C35_ORYSJ3, ., 1, ., 3, ., 1, 60.49050.86450.9186yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.914
3rd Layer3.1.30.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query679
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-41
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-34
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-22
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-13
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 5e-05
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 9e-04
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 0.001
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 0.002
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  150 bits (381), Expect = 3e-41
 Identities = 81/290 (27%), Positives = 116/290 (40%), Gaps = 87/290 (30%)

Query: 381 LERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVML 440
           L  +L  E    L     D+ +AL +A  + ++  LE A     + P+ A  G+  +V L
Sbjct: 52  LVEELLEELEETLTLSEEDIEEALRKAFLRADEEILEEAQ----DEPDDARSGTTAVVAL 107

Query: 441 MKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNL 500
           ++G  +Y+ NVGDSRAVL                                        N 
Sbjct: 108 IRGNKLYVANVGDSRAVLC--------------------------------------RNG 129

Query: 501 TSLQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDAL 560
            ++QLT DH    EEE  RI+         V N RV G L VTRA G   LK        
Sbjct: 130 EAVQLTKDHKPVNEEERERIEKAGG----RVSNGRVPGVLAVTRALGDFDLK-------- 177

Query: 561 LEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAF 620
                       P ++  P V   +L   D FLIL+SDGL+   +++EAV  V S LA  
Sbjct: 178 ------------PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKE 225

Query: 621 PEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISL 670
              + AQ L++  L                     RR  HD+++V+++ L
Sbjct: 226 DLQEAAQELVDLAL---------------------RRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 679
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.8
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.63
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.6
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.48
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.09
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.01
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.48
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=4.8e-72  Score=594.05  Aligned_cols=311  Identities=56%  Similarity=0.924  Sum_probs=277.8

Q ss_pred             cccccccCCCCCcccEEEEEccCCCeEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhhhhccccccCCCCccccccccCC
Q 005756          270 SQNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPL  349 (679)
Q Consensus       270 ~~~~qwa~gk~~EDrv~vv~see~g~~f~GVfDGhgG~~aadfl~~~L~~~l~~eL~~ll~~~~~~~~~~~~~~~~~~~~  349 (679)
                      ..++||+||+++|||++++.+++++|+|||||||||||+|++|++++||.+|..+|++++|..+.-.             
T Consensus        74 ~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f-------------  140 (390)
T KOG0700|consen   74 ANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERF-------------  140 (390)
T ss_pred             hhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhcccc-------------
Confidence            4489999999999999999999999999999999999999999999999999999999999876511             


Q ss_pred             CchhhhhccCCCCccccccccccchhhhHHHHHHhh--hcCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHHhhhcCc
Q 005756          350 DDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKL--NCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENP  427 (679)
Q Consensus       350 ~~~~~~~~~~~~~~g~~~~~w~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~aL~~A~~~~e~~~l~~~~~~~~~~~  427 (679)
                                         .|...++    +++...  .... ......+..+.++|.+||+++|++|+++++++...++
T Consensus       141 -------------------~~e~~~~----~~~~~~~~~~~~-~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p  196 (390)
T KOG0700|consen  141 -------------------PSEYKSE----ELEHLLVYWKQL-SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENP  196 (390)
T ss_pred             -------------------ccccccc----hhhhhhhhhhcc-cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence                               1111111    111110  0111 2222337899999999999999999999999999999


Q ss_pred             cccCCCceEEEEEEeCCeEEEEEEecceEEEEecCCCCCCCCcCccchhhccccccccccccCCCccccCCcceEEEccc
Q 005756          428 ELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLTT  507 (679)
Q Consensus       428 e~~~~GSTalV~Li~~~~lyVaNVGDSRAvL~r~~~~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~l~~~qLT~  507 (679)
                      +++.|||||+|++|++.+|||||+|||||||++..+..                                ..|.++|||.
T Consensus       197 ~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~--------------------------------~~~~A~qLS~  244 (390)
T KOG0700|consen  197 ELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNG--------------------------------SWLVAVQLST  244 (390)
T ss_pred             hhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCC--------------------------------CeEEEEecCh
Confidence            99999999999999999999999999999998876321                                1269999999


Q ss_pred             CCCCCcHHHHHHHHhcCCCCccccccc--cccCccccccccCCCCcCCCcch-hHHHHHHHhcccCCCCceecCCceEEE
Q 005756          508 DHSTHEEEEVRRIKNEHPDDDSAVMND--RVKGYLKVTRAFGAGFLKQPKWN-DALLEMFRINYIGTSPYITCNPSVYHH  584 (679)
Q Consensus       508 DHs~~~~~E~~RI~~~gp~~~~~i~n~--RV~G~L~vTRAfGd~~lK~pk~n-~~lle~f~~~~ig~~p~Vs~~Pdv~~~  584 (679)
                      ||+.++++|++||+.+||++..++.+.  ||+|.|++||||||.+||+|+|| ++|++||+++|++++|||+|+|+|++|
T Consensus       245 dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~H  324 (390)
T KOG0700|consen  245 DHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHH  324 (390)
T ss_pred             hhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEE
Confidence            999999999999999999999999988  99999999999999999999999 999999999999999999999999999


Q ss_pred             EeCCCCeEEEEeCcCCCCCCCHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHcCCCccccc
Q 005756          585 RLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAA-FPEGDPAQHLIEEVLFRAAKKAGMDFHELL  649 (679)
Q Consensus       585 ~L~~~D~FLVLaSDGLwD~LsneEVv~~V~~~l~~-~~~~d~aq~Lv~e~L~raA~~~G~~~~~ll  649 (679)
                      +|.++|+|||||||||||+|+|||+|++|.+|+.. .|.+++|++||+++|.++|++++|.+++|+
T Consensus       325 rL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aakk~~~r~s~ll  390 (390)
T KOG0700|consen  325 KLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAAKKRGMRLSDLL  390 (390)
T ss_pred             EcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhhhhccccHhhcC
Confidence            99999999999999999999999999999999987 899999999999999999999999887764

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query679
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 2e-18
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-18
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 7e-07
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 8e-07
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-06
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-06
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-06
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-06
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-06
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-04
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-04
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-04
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-04
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 123/298 (41%), Gaps = 87/298 (29%)
Query: 429 LALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEA 488
           +A  G+   V  + G D+++ N GDSRA+LG                  + EE       
Sbjct: 196 VAFSGATACVAHVDGVDLHVANTGDSRAMLG------------------VQEE------- 230
Query: 489 LDGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDD--SAVMNDRVKGYLKVTRAF 546
            DG       + +++ L+ DH+   E EV R+K EHP ++  S V  DR+ G L   RAF
Sbjct: 231 -DG-------SWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAF 282
Query: 547 GAGFLKQP-------------KWNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFL 593
           G    K               + ND     F      T PY+T  P V +HRL P+DKFL
Sbjct: 283 GDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFL 342
Query: 594 ILSSDGLYQYFTSEEAVSEVESFL---------------------------------AAF 620
           +L++DGL++    ++ V  V  +L                                 + F
Sbjct: 343 VLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVF 402
Query: 621 PEGDPAQHLIEEVLFRAAKKAGMDFHE----LLDIPQGDRRIYHDDVSVIIISLEGRI 674
            + + A HLI   +     + G   HE    +L +P+   R+Y DD+++I++     +
Sbjct: 403 EDQNAATHLIRHAV--GNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHV 458
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query679
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-72
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 5e-44
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-33
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 9e-30
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 5e-27
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-25
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-24
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 6e-24
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 9e-24
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 5e-22
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-20
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-19
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-19
1txo_A237 Putative bacterial enzyme; serine/threonine protei 6e-09
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-08
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 4e-08
3rnr_A211 Stage II sporulation E family protein; structural 6e-08
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-07
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  240 bits (614), Expect = 3e-72
 Identities = 95/475 (20%), Positives = 162/475 (34%), Gaps = 88/475 (18%)

Query: 251 NENGVVVTDDDDGEFCSMKS-QNLQWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDA 309
           NE    V + D     S+    + +       EDR       +   + +G++DG  G   
Sbjct: 21  NEYSFKVPEFDGKNVSSILGFDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCAC 80

Query: 310 PDYLINNLYPAVHKELKGLLWNDKLESSSSDETQKEIFPLDDDSKRKMKGNSNEGIVKKC 369
              +   L+  +   L        LE  ++ E+ + + P+    K      S E    K 
Sbjct: 81  SQAVSERLFYYIAVSLLP--HETLLEIENAVESGRALLPILQWHKHPNDYFSKE--ASKL 136

Query: 370 VGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKMVMENPEL 429
                     EL      E ++                    E    +    +      +
Sbjct: 137 YFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRV 196

Query: 430 ALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEAL 489
           A  G+   V  + G D+++ N GDSRA+LG +                            
Sbjct: 197 AFSGATACVAHVDGVDLHVANTGDSRAMLGVQ---------------------------- 228

Query: 490 DGDDLDRFNNLTSLQLTTDHSTHEEEEVRRIKNEHPDDDSA--VMNDRVKGYLKVTRAFG 547
                +   + +++ L+ DH+   E E++R+K EHP +++   V  DR+ G L   RAFG
Sbjct: 229 -----EEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFG 283

Query: 548 AGFLKQPK-------------WNDALLEMFRINYIGTSPYITCNPSVYHHRLNPRDKFLI 594
               K                 ND     F      T PY+T  P V +HRL P+DKFL+
Sbjct: 284 DVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLV 343

Query: 595 LSSDGLYQYFTSEEAVSEVESFLAAFPEGDP----------------------------- 625
           L++DGL++    ++ V  V  +L       P                             
Sbjct: 344 LATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFE 403

Query: 626 ----AQHLIEEVLF--RAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGRI 674
               A HLI   +              ++L +P+   R+Y DD+++I++     +
Sbjct: 404 DQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHV 458
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query679
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.97
3rnr_A211 Stage II sporulation E family protein; structural 99.97
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.6
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.53
3f79_A255 Probable two-component response regulator; adaptor 99.4
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.12
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.75
3eq2_A394 Probable two-component response regulator; adaptor 97.05
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=4.8e-50  Score=446.41  Aligned_cols=348  Identities=26%  Similarity=0.375  Sum_probs=221.4

Q ss_pred             cccCCCCCcccEEEEEccCCCeEEEEEEcCCCCChHHHHHHHHHHHHHHHHHh--hhhccccccCCC--Ccc-ccc---c
Q 005756          274 QWAQGKAGEDRMQIVVSEERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELK--GLLWNDKLESSS--SDE-TQK---E  345 (679)
Q Consensus       274 qwa~gk~~EDrv~vv~see~g~~f~GVfDGhgG~~aadfl~~~L~~~l~~eL~--~ll~~~~~~~~~--~~~-~~~---~  345 (679)
                      |++.++.|||++.+......++.||||||||||+.|++|++++|+.+|...|.  ..+.+.......  +.. ...   .
T Consensus        45 ~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~  124 (467)
T 2pnq_A           45 RLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKH  124 (467)
T ss_dssp             EECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCC
T ss_pred             ccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccccc
Confidence            77888999999887765445677899999999999999999999999987531  111100000000  000 000   0


Q ss_pred             ccCCCchhhhhccCCCCccccccccccchhhhHHHHHHhhhcCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHHh---
Q 005756          346 IFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKM---  422 (679)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~g~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~v~~aL~~A~~~~e~~~l~~~~~~---  422 (679)
                      ...+.   .    +.. ...+.......|.. ...+.         ........+.++|.+||.++++.+++.+...   
T Consensus       125 ~~~~~---~----~~~-~~~y~~~~~~~~~~-~~~~~---------~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~  186 (467)
T 2pnq_A          125 PNDYF---S----KEA-SKLYFNGLRTYWQE-LIDLN---------TGESADIDVKEALINAFKRLDNDISLEAQVGDPN  186 (467)
T ss_dssp             TTCCC---C----STT-HHHHHHHHHHHHHH-HHHC---------------CCCHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred             ccccc---h----hhh-hhhhhcchhhhhhh-hcccc---------ccccchhhHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            00000   0    000 00000000111210 00000         0000112578899999999999998765320   


Q ss_pred             ---hhcCccccCCCceEEEEEEeCCeEEEEEEecceEEEEecCCCCCCCCcCccchhhccccccccccccCCCccccCCc
Q 005756          423 ---VMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNN  499 (679)
Q Consensus       423 ---~~~~~e~~~~GSTalV~Li~~~~lyVaNVGDSRAvL~r~~~~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~  499 (679)
                         ....+....||||++++++.++++||||||||||||++..+                                 ...
T Consensus       187 ~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~---------------------------------~g~  233 (467)
T 2pnq_A          187 SFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEE---------------------------------DGS  233 (467)
T ss_dssp             HHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECT---------------------------------TSC
T ss_pred             cccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecC---------------------------------CCc
Confidence               01123455799999999999999999999999999999641                                 023


Q ss_pred             ceEEEcccCCCCCcHHHHHHHHhcCCCCc--cccccccccCccccccccCCCCcCCCcchhHHHHHHHhccc--------
Q 005756          500 LTSLQLTTDHSTHEEEEVRRIKNEHPDDD--SAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYI--------  569 (679)
Q Consensus       500 l~~~qLT~DHs~~~~~E~~RI~~~gp~~~--~~i~n~RV~G~L~vTRAfGd~~lK~pk~n~~lle~f~~~~i--------  569 (679)
                      |.+++||.||++.++.|++||..+||...  .++.++||+|.|.|||||||..+|.+   ..+.+.+...++        
T Consensus       234 ~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~---~~~~~~~~~~~~G~~~~~~~  310 (467)
T 2pnq_A          234 WSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWS---IDLQKRVIESGPDQLNDNEY  310 (467)
T ss_dssp             EEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSC---HHHHHHHHSSSCC-------
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhccc---chhhhhhhcccccccccccc
Confidence            57999999999999999999999998543  45567899999999999999998753   333333323333        


Q ss_pred             --------CCCCceecCCceEEEEeCCCCeEEEEeCcCCCCCCCHHHHHHHHHHHHhcCCCCCH-------------HH-
Q 005756          570 --------GTSPYITCNPSVYHHRLNPRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDP-------------AQ-  627 (679)
Q Consensus       570 --------g~~p~Vs~~Pdv~~~~L~~~D~FLVLaSDGLwD~LsneEVv~~V~~~l~~~~~~d~-------------aq-  627 (679)
                              .++|+|+++|+|..++|.++|.|||||||||||+|+++||+++|...+......+|             ++ 
T Consensus       311 ~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~  390 (467)
T 2pnq_A          311 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGL  390 (467)
T ss_dssp             ----CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-----------------
T ss_pred             cccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHH
Confidence                    36789999999999999999999999999999999999999999988753221111             00 


Q ss_pred             --------------HHHHHHHHHHHHHcC----CCcc---ccccCCCCCCCCCCCcEEEEEEEeCCccc
Q 005756          628 --------------HLIEEVLFRAAKKAG----MDFH---ELLDIPQGDRRIYHDDVSVIIISLEGRIW  675 (679)
Q Consensus       628 --------------~Lv~e~L~raA~~~G----~~~~---~ll~ip~g~rR~~~DNITVIVI~l~~~iw  675 (679)
                                    .-++..|++.|...|    |+++   +||.||++.+|+|+||||||||.|.....
T Consensus       391 l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~~~~  459 (467)
T 2pnq_A          391 LTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVV  459 (467)
T ss_dssp             --------------CCHHHHHHHHHHC-------------------------CCSCEEEEEEEECHHHH
T ss_pred             HHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCchHh
Confidence                          112334555565543    5543   69999999999999999999999986543
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 679
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-13
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 0.003
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 3e-13
 Identities = 54/281 (19%), Positives = 86/281 (30%), Gaps = 74/281 (26%)

Query: 394 NDIHSDVLKALSQALKKTEDSYLETADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGD 453
               +  ++ +   ++       E    M  +       GS  + +L+  +  Y +N GD
Sbjct: 86  GSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGD 145

Query: 454 SRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTSLQLTTDHSTHE 513
           SR +L                                        N      T DH    
Sbjct: 146 SRGLL--------------------------------------CRNRKVHFFTQDHKPSN 167

Query: 514 EEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSP 573
             E  RI+N       +VM  RV G L V+RA G    K                  T  
Sbjct: 168 PLEKERIQNAGG----SVMIQRVNGSLAVSRALGDFDYKCVHGK-----------GPTEQ 212

Query: 574 YITCNPSVYHHRLN-PRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEE 632
            ++  P V+    +   D+F+IL+ DG++    +EE    V S L      D  + +  E
Sbjct: 213 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE---VTDDLEKVCNE 269

Query: 633 VLFRAAKKAGMDFHELLDIPQGDRRIYHDDVSVIIISLEGR 673
           V+     K                    D++SVI+I     
Sbjct: 270 VVDTCLYKGS-----------------RDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query679
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=388.90  Aligned_cols=264  Identities=24%  Similarity=0.340  Sum_probs=215.0

Q ss_pred             ccccc----CC--CCCcccEEEEEcc---CCCeEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhhhhccccccCCCCccc
Q 005756          272 NLQWA----QG--KAGEDRMQIVVSE---ERGWVFVGIYDGFNGPDAPDYLINNLYPAVHKELKGLLWNDKLESSSSDET  342 (679)
Q Consensus       272 ~~qwa----~g--k~~EDrv~vv~se---e~g~~f~GVfDGhgG~~aadfl~~~L~~~l~~eL~~ll~~~~~~~~~~~~~  342 (679)
                      +++|+    ||  ++|||++.++...   ...|.||||||||||+.|++|++++|+..|.+++....             
T Consensus        20 ~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~-------------   86 (295)
T d1a6qa2          20 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKG-------------   86 (295)
T ss_dssp             TEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHC-------------
T ss_pred             ceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcc-------------
Confidence            56665    44  6799998777643   34588999999999999999999999999987543110             


Q ss_pred             cccccCCCchhhhhccCCCCccccccccccchhhhHHHHHHhhhcCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHHh
Q 005756          343 QKEIFPLDDDSKRKMKGNSNEGIVKKCVGFAWDREKLELERKLNCEGSNGLNDIHSDVLKALSQALKKTEDSYLETADKM  422 (679)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~g~~~~~w~~e~~~~~~~~~~~~~~~~~~~~~~~~~~v~~aL~~A~~~~e~~~l~~~~~~  422 (679)
                                                                      .......+.+.++|.++|.++++.+....+  
T Consensus        87 ------------------------------------------------~~~~~~~~~~~~al~~a~~~~~~~~~~~~~--  116 (295)
T d1a6qa2          87 ------------------------------------------------SAGAPSVENVKNGIRTGFLEIDEHMRVMSE--  116 (295)
T ss_dssp             ------------------------------------------------SSSSCCHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             ------------------------------------------------ccccchHHHHHHHHHHHHHHHHHHHhhhhh--
Confidence                                                            011224567889999999999998876654  


Q ss_pred             hhcCccccCCCceEEEEEEeCCeEEEEEEecceEEEEecCCCCCCCCcCccchhhccccccccccccCCCccccCCcceE
Q 005756          423 VMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLGWKFEPNIGLGKAGRDLKRINEETMHDHEALDGDDLDRFNNLTS  502 (679)
Q Consensus       423 ~~~~~e~~~~GSTalV~Li~~~~lyVaNVGDSRAvL~r~~~~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~l~~  502 (679)
                        .......||||++++++.++++||+||||||||+++++                                      .+
T Consensus       117 --~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~--------------------------------------~~  156 (295)
T d1a6qa2         117 --KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR--------------------------------------KV  156 (295)
T ss_dssp             --HTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT--------------------------------------EE
T ss_pred             --hccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc--------------------------------------cc
Confidence              33445679999999999999999999999999999988                                      89


Q ss_pred             EEcccCCCCCcHHHHHHHHhcCCCCccccccccccCccccccccCCCCcCCCcchhHHHHHHHhcccCCCCceecCCceE
Q 005756          503 LQLTTDHSTHEEEEVRRIKNEHPDDDSAVMNDRVKGYLKVTRAFGAGFLKQPKWNDALLEMFRINYIGTSPYITCNPSVY  582 (679)
Q Consensus       503 ~qLT~DHs~~~~~E~~RI~~~gp~~~~~i~n~RV~G~L~vTRAfGd~~lK~pk~n~~lle~f~~~~ig~~p~Vs~~Pdv~  582 (679)
                      ++||.||++.++.|++||...|    +.+...|+.|.|.+||||||..+|.+..           ..+.+++|+++|+|.
T Consensus       157 ~~lT~dH~~~~~~E~~Ri~~~g----g~v~~~r~~g~l~~tRa~Gd~~~k~~~~-----------~~~~~~~v~~~Pdi~  221 (295)
T d1a6qa2         157 HFFTQDHKPSNPLEKERIQNAG----GSVMIQRVNGSLAVSRALGDFDYKCVHG-----------KGPTEQLVSPEPEVH  221 (295)
T ss_dssp             EEECCCCCTTSHHHHHHHHHTT----CCEETTEETTTBSCSBCEECGGGSCCTT-----------CCGGGSSSBCCCEEE
T ss_pred             eeeccccCcccHHHHhhHhhcC----CcccccccCCceeeeeccCcHHhhhccc-----------cCcccccccccccce
Confidence            9999999999999999999999    5667889999999999999999997432           223557899999999


Q ss_pred             EEEeC-CCCeEEEEeCcCCCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHcCCCccccccCCCCCCCCCCC
Q 005756          583 HHRLN-PRDKFLILSSDGLYQYFTSEEAVSEVESFLAAFPEGDPAQHLIEEVLFRAAKKAGMDFHELLDIPQGDRRIYHD  661 (679)
Q Consensus       583 ~~~L~-~~D~FLVLaSDGLwD~LsneEVv~~V~~~l~~~~~~d~aq~Lv~e~L~raA~~~G~~~~~ll~ip~g~rR~~~D  661 (679)
                      .+.+. ++|.|||||||||||+|+++||+++|.+.+..   .+.++.+++ .|+..|.++|.                +|
T Consensus       222 ~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~---~~~~~~~a~-~Lv~~A~~~gs----------------~D  281 (295)
T d1a6qa2         222 DIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEV---TDDLEKVCN-EVVDTCLYKGS----------------RD  281 (295)
T ss_dssp             EEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTT---CCCHHHHHH-HHHHHHHHTTC----------------CS
T ss_pred             EEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhc---CCCHHHHHH-HHHHHHHhcCC----------------CC
Confidence            99986 56789999999999999999999999876542   233455554 45666777666                89


Q ss_pred             cEEEEEEEeCCc
Q 005756          662 DVSVIIISLEGR  673 (679)
Q Consensus       662 NITVIVI~l~~~  673 (679)
                      |||||||.|.+.
T Consensus       282 NiTvivv~~~~~  293 (295)
T d1a6qa2         282 NMSVILICFPNA  293 (295)
T ss_dssp             CEEEEEEECTTS
T ss_pred             CeEEEEEeccCC
Confidence            999999999863
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure