BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005758
(678 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/702 (71%), Positives = 566/702 (80%), Gaps = 46/702 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDT--------MGRTKPRYNHYYQPNNNYRHRGNNNNNTNNI 52
M+RSRSKRNYYYDHQDYD D M RTKPRYN+ NN YR RG NN N
Sbjct: 1 MERSRSKRNYYYDHQDYDNDNLNNNNNNNMVRTKPRYNNN---NNYYRQRGQGGNNMFNN 57
Query: 53 MNNNTSINNSNNRANSNPKDPS--LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
NN S + +DPS LMVTT+YRILCHDMKAGGVIGKSGSIIKSIRQHTGA
Sbjct: 58 NNNRFSRTQQQQQPPQQQQDPSSTLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 117
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD--------G 162
WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE+D G
Sbjct: 118 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSG 177
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETK 222
GGF EE+EY G GG NRVATR+VVSRMHVGCLLGKGGKIIEQMRMETK
Sbjct: 178 AGGF---EEDEYVGRGG----------NRVATRLVVSRMHVGCLLGKGGKIIEQMRMETK 224
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS 282
TQIRILPRDH+LPRCVS+SEEIVQV+GD+N VKNAVAIISSRLRESQHRDRSHFHGR+ S
Sbjct: 225 TQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAIISSRLRESQHRDRSHFHGRVQS 284
Query: 283 PDRFFPDDDYVPHMNNTARRPSMDG-----ARFSGSNYRSNNYGPRPSGYSIEAGAAPMS 337
P+RF DDDYVPHMN RR SMDG +R SG NYR+NNY R G+ ++AGA P +
Sbjct: 285 PERFL-DDDYVPHMNT--RRSSMDGPPSFGSRLSGPNYRNNNYSSRAPGFPVDAGADPNA 341
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
DS QPFY EDLVFR+LCPIDKV RV+GES+G+V+LLQNEIGVD+KVADPV GSDEQIITI
Sbjct: 342 DSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITI 401
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMR 457
SEEGPDDELFPAQEALLHIQTRIVDL ADKDNIITTRLLVPSSEIGCLEGRDGSLSEM
Sbjct: 402 CSEEGPDDELFPAQEALLHIQTRIVDLVADKDNIITTRLLVPSSEIGCLEGRDGSLSEME 461
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
TGA I+IL +E +P +SGTDELVQI GE++AARDALVEVT+RLRSYLY+D FQK+ P
Sbjct: 462 SLTGATIEILPKEMLPTYLSGTDELVQIQGEVKAARDALVEVTSRLRSYLYKDVFQKDLP 521
Query: 518 P--SSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P S+ GP G+A ++AAS + TPARE + DPP AT+Q+VQ +T QPSK+A GS +
Sbjct: 522 PTVSAPGPAGTAGGLQAASSNNPTPAREGHSGGDPP-ATYQNVQSASTPQPSKDARGSSA 580
Query: 576 ETVKQNESERREDV-PTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSG 634
ETVKQNESE RED+ P +NR+P+ LVTRS LEVV+P+ AVPKLITKSK L + SE+SG
Sbjct: 581 ETVKQNESEHREDLPPPTMNRIPVTLVTRSILEVVIPEPAVPKLITKSKNKLAQISELSG 640
Query: 635 ASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
A+V+LVE +P+ T+KIIQISGTPEQ ERAQS+LQGFILS Q+
Sbjct: 641 ANVTLVEDRPDVTEKIIQISGTPEQAERAQSLLQGFILSIQE 682
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/682 (68%), Positives = 541/682 (79%), Gaps = 44/682 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNYYYD QDYD +T+ RT+PRYNH+Y N RHRG
Sbjct: 1 MERSRSKRNYYYD-QDYDSETLARTRPRYNHHYTTAGNQRHRGGGAA------------- 46
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
R +D L VTT+YRILCHD+KAGGVIGKSGSIIKSIRQHTGAWINVHEL+PG
Sbjct: 47 ----RHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPG 102
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
DEERIIEISDTRRRDPEGRMPSFSPAQEAL LIH+RILESD G E++EEYG G G
Sbjct: 103 DEERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGV-AEDDEEYGAGRGG 161
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
G +RVATR+VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH+LPRCVSM
Sbjct: 162 -----GAGRDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSM 216
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFF-PDDDYVPHMNNT 299
SEEIVQVVGD+N VKNA+ IISSRLRESQHRDRSHFHGR+HSP+RFF PDDDYVPH+ +
Sbjct: 217 SEEIVQVVGDVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSG 276
Query: 300 ARRPSMDGARF----SGSNYRSNNYGPRPS-GYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+RR S+DGA F S +N R+NN+ PS Y++E GAAP+ D Q FYGE+LVFR+LC
Sbjct: 277 SRRSSVDGASFGSRGSNTNSRNNNH---PSLSYAMEPGAAPVVDDAQGFYGEELVFRILC 333
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
P++KV +IGES+GIVE LQ+E+GVD+KV DPV GSDEQII I+SEEGPDDELFPAQEAL
Sbjct: 334 PVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEAL 393
Query: 415 LHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPA 474
LHIQTRIVDL DKDN ITTRL+VPSSEI CL+G+D SLSE+RR TGANIQIL R+++P
Sbjct: 394 LHIQTRIVDLVLDKDNTITTRLVVPSSEIECLDGKDVSLSEIRRLTGANIQILPRDDLPL 453
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAAS 534
CV+ TDELVQIVGEI+AARDA+VEVT+RLRSYLYRDFFQ++ P G+ EA+S
Sbjct: 454 CVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDPIPLPAPLPGA----EASS 509
Query: 535 PIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVIN 594
+I P E T T+Q+VQ A + P KE GS +E KQ ES RR+DV + +N
Sbjct: 510 SNNIVPVAETST-------TYQNVQTVAAALPPKETGGSSTEVGKQKESGRRDDVLSGLN 562
Query: 595 RVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQIS 654
R+ +PLVTRSTLEVV+P+YAVPKLI KSK+ L + SE+SGA+V+LVE +P+ TQKIIQIS
Sbjct: 563 RIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQIS 622
Query: 655 GTPEQVERAQSVLQGFILSTQD 676
GTPEQ ERAQS+LQGFILSTQ+
Sbjct: 623 GTPEQAERAQSLLQGFILSTQE 644
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/682 (67%), Positives = 538/682 (78%), Gaps = 47/682 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNYYYD QDYD +T+ RT+PRYNH+Y + N+
Sbjct: 1 MERSRSKRNYYYD-QDYDSETLARTRPRYNHHY-----------------STGGNHRHRG 42
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
R +D L VTT+YRILCHD+KAGGVIGKSGSIIKSIRQHTGAWINVHEL+PG
Sbjct: 43 GGAARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPG 102
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
DEERIIEISDTRRRDPEGRMPSFSPAQEAL LIH+RILESD G
Sbjct: 103 DEERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGV---------AEEDE 153
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
GG GG +R+ATR+VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH+LPRCVSM
Sbjct: 154 EYGGRGGGRDRIATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSM 213
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFF-PDDDYVPHMNNT 299
SEEIVQVVG++N VKNA+ IISSRLRESQHRDRSHFHGR+HSP+RFF PDDDYVPH+ +
Sbjct: 214 SEEIVQVVGNVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSG 273
Query: 300 ARRPSMDGARF----SGSNYRSNNYGPRPS-GYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+RR S+DGA F S +N R+NN+ PS Y++E GAAP+ D Q FYGE+LVFR+LC
Sbjct: 274 SRRSSVDGASFGSRGSNTNSRNNNH---PSLNYAMEPGAAPVVDDAQGFYGEELVFRILC 330
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
PI+KV R+IGESEGIVE LQNE+GVD+KV DPV GSDEQII I+SEEGPDDELFPAQEAL
Sbjct: 331 PIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEAL 390
Query: 415 LHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPA 474
LH+QTRIVDL DKDN ITTRL+VPSSEI CL+G+D SLSE+RR TGANIQIL R+E+P
Sbjct: 391 LHVQTRIVDLVLDKDNTITTRLVVPSSEIECLDGKDVSLSEIRRLTGANIQILPRDELPL 450
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAAS 534
CV+ TDELVQIVGEI+AARDA+VEVT+RLRSYLYRDFFQ++T P G+A A+S
Sbjct: 451 CVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDTVPLPAPLPGAA----ASS 506
Query: 535 PIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVIN 594
+I P E T T+Q++Q A + PSKE GS +ET KQ ES+RR+D+ + +N
Sbjct: 507 SNNIVPVTETPT-------TYQNLQTVAAALPSKETGGSSTETGKQKESDRRDDLLSGLN 559
Query: 595 RVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQIS 654
R+ +PLVTRSTLEVVLP+YAVPKL+ KSK+ L + SE+SGA+V+LVE +P+ TQKIIQIS
Sbjct: 560 RIAVPLVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVTLVEDRPDVTQKIIQIS 619
Query: 655 GTPEQVERAQSVLQGFILSTQD 676
GTPEQ ERAQS+LQGFILSTQ+
Sbjct: 620 GTPEQAERAQSLLQGFILSTQE 641
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/693 (70%), Positives = 548/693 (79%), Gaps = 58/693 (8%)
Query: 1 MDRSRSKRNYYYDHQDYDGDT-----MGRT-KPRYNHYYQPNNNYRHRGNNNNNTNNIMN 54
MDRSRSKRNYYYDHQDYD D M RT KPRYN+ NN YRHRG NN N
Sbjct: 1 MDRSRSKRNYYYDHQDYDNDNLNNNNMTRTTKPRYNNNNN-NNYYRHRGQGGNNMFN--- 56
Query: 55 NNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV 114
+YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV
Sbjct: 57 ---------------------NNNNSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV 95
Query: 115 HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD-----GGGGFYGE 169
HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE+D G G
Sbjct: 96 HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGL 155
Query: 170 EEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP 229
EE+EY G GG NRVATR+VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP
Sbjct: 156 EEDEYVGRGG----------NRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP 205
Query: 230 RDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD 289
RDH+LPRCVSMSEEIVQVVGD++ VKNAVAIISSRLRESQHRDRSHFHGR+HSP+R F D
Sbjct: 206 RDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSRLRESQHRDRSHFHGRVHSPERLF-D 264
Query: 290 DDYVPHMNNTARRPSMDG-----ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY 344
DDY PHMN RR SMDG +R GSNYR+NNY R SG++ +AGA P++DS QPFY
Sbjct: 265 DDYAPHMNT--RRSSMDGPPSFGSRVPGSNYRNNNYSSRASGFAADAGADPIADSAQPFY 322
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
EDLVFR+LCPIDK+ RV+GES+GIV+LLQNEIGVD+KVADPV GSDEQIITI SEEGPD
Sbjct: 323 VEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPD 382
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANI 464
DELFPAQEALLHIQTRIVDL D D+I TTRLLV SSEIGCLEGRD SLSE+ R TGA I
Sbjct: 383 DELFPAQEALLHIQTRIVDLVPDNDHITTTRLLVRSSEIGCLEGRDASLSEIERLTGATI 442
Query: 465 QILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
+IL +E++P+ +SG DE+VQI GEI+AARDALVEVT+RLRSY+Y+D F+K+ PP + P
Sbjct: 443 EILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRLRSYIYKDVFEKDLPPPVSAP- 501
Query: 525 GSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESE 584
G A ++AASP TPARE DPP A++Q+VQ AT QPSK+A GS E VKQNESE
Sbjct: 502 GLAGGMQAASP-SPTPAREGPIGGDPP-ASYQNVQSAATPQPSKDARGSSVEAVKQNESE 559
Query: 585 RREDVP-TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ 643
RRE++P T +NR+P+ LVTRSTLEVV+P+ AVPKLITKSK L + SE+SGA+V+LVE +
Sbjct: 560 RREELPVTTMNRIPVTLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDR 619
Query: 644 PEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
P+ +KII+ISGTPEQ ERAQS+LQGFILSTQ+
Sbjct: 620 PDVKEKIIKISGTPEQAERAQSLLQGFILSTQE 652
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/686 (68%), Positives = 553/686 (80%), Gaps = 33/686 (4%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M++SRSKRNYYYDHQD+D D+MGRT+PRYN+ + PNNNYRHRGN
Sbjct: 1 MEKSRSKRNYYYDHQDFDSDSMGRTRPRYNNNHYPNNNYRHRGNAVRP------------ 48
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
S P+D SLMVTTTYRILCHD KAGGVIGKSGSIIKSIRQHTGAWINVHEL+PG
Sbjct: 49 -------SKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPG 101
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF----YGEEEEEYGG 176
DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIH+RILES+ GF YG E+EE
Sbjct: 102 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEE-DD 160
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
GGV GGG G G RVATR+VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH+LPR
Sbjct: 161 YGGVRGGGGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPR 220
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP-DDDYVPH 295
C+SMSEEIVQ+VGD N VK A+AI+SSRLRESQHRDRSHFHGRLHSP+R FP +DDYVPH
Sbjct: 221 CISMSEEIVQIVGDTNAVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPH 280
Query: 296 MNNTARRPSMDG----ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
ARR MDG R S SN R N+Y R S + +E GAAP++D++ PFYGEDLVF+
Sbjct: 281 ---NARRLPMDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFK 337
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
+LCPI+KV VIGES GI+ELL+N++GVD+KV+DPV GS+EQI+ ISS+EGPDDELFPAQ
Sbjct: 338 ILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQ 397
Query: 412 EALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREE 471
EALLHIQTRIVDL DK+NI+TTRLLVPSS+IGCLEGRDGSL EM+R TGAN+ I+ RE+
Sbjct: 398 EALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPRED 457
Query: 472 VPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPS-STGPTGSALVV 530
+P VSG DELVQI+G+I+AARDALVE+T+RLR+ LY++ FQK+ P S T +L +
Sbjct: 458 LPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGL 517
Query: 531 EAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVP 590
E +S + AREV + D + Q+VQ T+Q KE GS +ET QNE++RRED+P
Sbjct: 518 EESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLP 577
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+ +NR+P+PLVTRSTLEVV+P+ AVPKLITKSK L + SE+SGA+V+LVE +P+ TQKI
Sbjct: 578 SGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKI 637
Query: 651 IQISGTPEQVERAQSVLQGFILSTQD 676
IQISGTPEQ ERAQS+LQGFILS Q+
Sbjct: 638 IQISGTPEQAERAQSLLQGFILSLQE 663
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/683 (67%), Positives = 544/683 (79%), Gaps = 32/683 (4%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
MDRSRSKR Y+Y+ QDYD +T+GRTKPRYN+ NN+ + N++
Sbjct: 1 MDRSRSKRGYFYE-QDYDSETLGRTKPRYNNN-----------NNHGGHHYNTNSHHRRG 48
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ S +D S+MVTT+YRILCHD+KAGGVIGKSGSIIKSIRQHTGAWINVHELIPG
Sbjct: 49 GAGAGRASKLQDSSVMVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 108
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
DEERIIEISDTRRRDPEGRMP FSPAQEALF+IHDRILESD G G + G
Sbjct: 109 DEERIIEISDTRRRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGP 168
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
RGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR+ETKTQIRILPRDH+LPRCVSM
Sbjct: 169 -----RGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSM 223
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYVPHMNNT 299
SEEIVQVVGD+N VKNA+A ISSRLRESQHRDRSHFHGR+ S P+RFFP DD HMNN
Sbjct: 224 SEEIVQVVGDVNAVKNAIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNA 283
Query: 300 ARRPSMDGARFSGS------NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML 353
RR +DG F RSN++ R SGY++E+GAAP++D+ Q F GED+VFR+L
Sbjct: 284 PRRMPIDGNSFGSRVSTGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRIL 343
Query: 354 CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEA 413
CP+DKV V+GES+GI+ELLQNEIGVD+KVAD V GS+EQII I+SEEGPDDELFPAQEA
Sbjct: 344 CPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEA 403
Query: 414 LLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVP 473
LLHIQTRIV+L DK+N+ITTRLLVPSSEIGC EGRD SLSEMRR TGANIQI+ RE++P
Sbjct: 404 LLHIQTRIVNLLPDKENVITTRLLVPSSEIGCFEGRDCSLSEMRRLTGANIQIVPREQLP 463
Query: 474 ACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAA 533
A +SGTDEL++IVGEI+AARDALVEVT+RLRSYLYR+FF K+ PP S GS +EA+
Sbjct: 464 AFISGTDELLEIVGEIKAARDALVEVTSRLRSYLYREFFPKDMPPPSISAPGS---LEAS 520
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVI 593
SP +ITPARE T +DPP +Q+VQ A+ QPSK++ G+ ETVKQNE+ VP+V+
Sbjct: 521 SPNNITPAREGHTASDPPTTNYQNVQAIASVQPSKDSGGTGGETVKQNET-----VPSVL 575
Query: 594 NRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQI 653
NR+P+ LVTRSTLEVV+P++AVPKLIT+SK L + SE SGA+V+L+E + E T KIIQI
Sbjct: 576 NRIPVTLVTRSTLEVVIPEHAVPKLITRSKNKLAQISEWSGANVTLLEDRLEATGKIIQI 635
Query: 654 SGTPEQVERAQSVLQGFILSTQD 676
SGTPEQ E+AQS+LQGFILS +
Sbjct: 636 SGTPEQTEKAQSLLQGFILSISE 658
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/685 (66%), Positives = 527/685 (76%), Gaps = 59/685 (8%)
Query: 1 MDRSRSKRNYYYDHQ-DYDGD-TMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTS 58
M+RSRSKRNYYYDHQ DYD + TM RTKPRYN N + NNN+ N
Sbjct: 1 MERSRSKRNYYYDHQQDYDNEITMSRTKPRYN-------NNTNNTNNNHYFPNNNRYRGG 53
Query: 59 INNSNNRANSNPK-DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
NNSNN S P+ D SLMVTT+YRILCHDMKAGGVIGKSG+IIKSIRQHTGAWINVHEL
Sbjct: 54 SNNSNNNRPSKPQQDNSLMVTTSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHEL 113
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF-YGEEEEEYGG 176
IPGDEERIIEISDTRRRDPEGRMP+FSPAQEALFLIHDRILESDG G Y EE+EYGG
Sbjct: 114 IPGDEERIIEISDTRRRDPEGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGG 173
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
G NRVATR+VVSRMHVGCLLGKGGKIIEQMR+ETKTQIRILPRDH+LPR
Sbjct: 174 RG------INNSNNRVATRLVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPR 227
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSH--FHGRLHSPDRFFPDDDYVP 294
CVSMSEEIVQVVGD+N VKNA+AIISSRLRESQHRDRSH FHGR+HSP+RFFPDDDYVP
Sbjct: 228 CVSMSEEIVQVVGDVNAVKNAIAIISSRLRESQHRDRSHGNFHGRMHSPERFFPDDDYVP 287
Query: 295 HMNNTARRPSMDGARF----SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF 350
HMNNT RR S+DG F SG NYR++NY R GY++EAGA P++DS QPFYG+DLVF
Sbjct: 288 HMNNTGRRSSIDGPSFGSRASGPNYRNSNYSSRQYGYNVEAGA-PVADSAQPFYGDDLVF 346
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
RMLCP DKV +V+GES+GI++LLQN+IGVD+KV+DPV GSDEQ+I ISSEEGPDDELFPA
Sbjct: 347 RMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPA 406
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSRE 470
QEALLHIQT I+DL D DNII T+L+V S EIGCLEGRDGSLSEM R TGA IQIL RE
Sbjct: 407 QEALLHIQTHIIDLVPDSDNIIKTKLIVSSGEIGCLEGRDGSLSEMERLTGAKIQILPRE 466
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP-TGSALV 529
++PACVS DELVQI GEI+AARDALVEVT+RLRSYLY+++FQK+TPP + P TG+AL
Sbjct: 467 KLPACVSEADELVQIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPISVPSTGNALG 526
Query: 530 VEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDV 589
+EAASP +I P R+ + +PPAA + + P T+ P +
Sbjct: 527 MEAASPNNINPPRDGHSGGEPPAANYHT---PKTAAPIQ--------------------- 562
Query: 590 PTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQK 649
+++V + + R + ++S L + +SGA+V+L+E +PE T+K
Sbjct: 563 ---LSKVIILWLCRIFFLLHFS-------FSRSYVQLLLSTVLSGANVTLLEDRPEVTEK 612
Query: 650 IIQISGTPEQVERAQSVLQGFILST 674
IIQISGTPEQVERAQS+LQGFILS+
Sbjct: 613 IIQISGTPEQVERAQSLLQGFILSS 637
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/608 (69%), Positives = 493/608 (81%), Gaps = 43/608 (7%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
MVTT+YRILCHD+KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD
Sbjct: 1 MVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 60
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEGRMP FSPAQEALF+IHDRILESD G +G G
Sbjct: 61 PEGRMPQFSPAQEALFMIHDRILESDAG----------FGNG------------------ 92
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
MVVSRMHVGCLLGKGGKIIEQMR+ETKTQIRILPRDH+LPRCVSMSEEIVQVVGD+N VK
Sbjct: 93 MVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVK 152
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYVPHMNNTARRPSMDGARFSGS- 313
NA+A ISSRLRESQHRDRSHFHGR+ S P+RFFP DD HMNN RR +DG F
Sbjct: 153 NAIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRV 212
Query: 314 -----NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
RSN++ R SGY++E+GAAP++D+ Q F GED+VFR+LCP+DKV V+GES+G
Sbjct: 213 STGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDG 272
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK 428
I+ELLQNEIGVD+KVAD V GS+EQII I+SEEGPDDELFPAQEALLHIQTRIV+L DK
Sbjct: 273 IIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDK 332
Query: 429 DNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGE 488
+N+ITTRLLVPSSEIGC EGRD SLSEMRR TGANIQI+ RE++PA +SGTDEL++IVGE
Sbjct: 333 ENVITTRLLVPSSEIGCFEGRDCSLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGE 392
Query: 489 IQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVT 548
I+AARDALVEVT+RLRSYLYR+FF K+ PP S GS +EA+SP +ITPARE T +
Sbjct: 393 IKAARDALVEVTSRLRSYLYREFFPKDMPPPSISAPGS---LEASSPNNITPAREGHTAS 449
Query: 549 DPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEV 608
DPP +Q+VQ A+ QPSK++ G+ ETVKQNE+ VP+V+NR+P+ LVTRSTLEV
Sbjct: 450 DPPTTNYQNVQAIASVQPSKDSGGTGGETVKQNET-----VPSVLNRIPVTLVTRSTLEV 504
Query: 609 VLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQ 668
V+P++AVPKLIT+SK L + SE SGA+V+L+E + E T KIIQISGTPEQ E+AQS+LQ
Sbjct: 505 VIPEHAVPKLITRSKNKLAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQ 564
Query: 669 GFILSTQD 676
GFILS +
Sbjct: 565 GFILSISE 572
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/686 (61%), Positives = 513/686 (74%), Gaps = 47/686 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNY+YD QDYDGD+M R+KPRYN NNY H G N
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYN------NNY-HFGGGGGGNNRYRGGGGGGG 52
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ + S+P+ M TTTYRILCHD KAGGVIGKSG+IIKSIRQHTGAWINVHEL+PG
Sbjct: 53 GNGRPSKSHPET---MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPG 109
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG---EEEEEYGGG 177
D ERIIEISD RRRDP+GRMPSFSPAQEALF +HDRILES+ G+ G EEEE+YGG
Sbjct: 110 DAERIIEISDNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGV 169
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
G RV TR+VVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ +LPRC
Sbjct: 170 RPGG--------GRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRC 221
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD--DDYVPH 295
VS+SEEIVQ+VG++N VKNA+AI+SSRLRESQHRDRS+F GR HSP+R F DDY+P
Sbjct: 222 VSLSEEIVQIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQ 281
Query: 296 MNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
+ RR S D RF N+R+NN+ R S Y+ EA A P+ ++V Y E+LVF++LCP
Sbjct: 282 L----RRQSSD--RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCP 332
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
DK+ RV+GES+GI++LLQNEIGVD++V+DPV GSDEQIITISSEE PDD FPAQEALL
Sbjct: 333 ADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALL 392
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPAC 475
HIQT+I+DL DKDN+ITTRLLVPS + CLEG+ GS+SE+ R TG ++QIL+REE+P C
Sbjct: 393 HIQTQIIDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRC 452
Query: 476 VSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGS----ALVVE 531
S D ++QI GEI+AAR+ALVE+T LRS+++++ QKETPP+ST TG A V+E
Sbjct: 453 ASINDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTSTTGPLEGVAGVME 512
Query: 532 AASPIDITPAREVQTVTDPPAATHQSVQIPATSQPS-KEAAGSVSETVKQNESERREDVP 590
AS + +RE P +++ ++Q +T P KE GSV+ K ESE RE+VP
Sbjct: 513 VASSNNTIQSRE------GPTSSNLNLQQVSTILPQFKEGFGSVA---KAGESEHREEVP 563
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+R+ +PLVTRSTLEVVLP+ VPKL+TKS+ L + SE SGASV++VE +PE TQ I
Sbjct: 564 VTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNI 623
Query: 651 IQISGTPEQVERAQSVLQGFILSTQD 676
I+ISGTPEQ ERAQS+LQGFILS Q+
Sbjct: 624 IRISGTPEQAERAQSLLQGFILSIQE 649
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/685 (61%), Positives = 513/685 (74%), Gaps = 47/685 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNY+YD QDYDGD+M R+KPRYN NNY H G N
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYN------NNY-HFGGGGGGNNRYRGGGGGGG 52
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ + S+P+ M TTTYRILCHD KAGGVIGKSG+IIKSIRQHTGAWINVHEL+PG
Sbjct: 53 GNGRPSKSHPET---MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPG 109
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG---EEEEEYGGG 177
D ERIIEISD RRRDP+GRMPSFSPAQEALF +HDRILES+ G+ G EEEE+YGG
Sbjct: 110 DAERIIEISDNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGV 169
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
G RV TR+VVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ +LPRC
Sbjct: 170 RPGG--------GRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRC 221
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD--DDYVPH 295
VS+SEEIVQ+VG++N VKNA+AI+SSRLRESQHRDRS+F GR HSP+R F DDY+P
Sbjct: 222 VSLSEEIVQIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQ 281
Query: 296 MNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
+ RR S D RF N+R+NN+ R S Y+ EA A P+ ++V Y E+LVF++LCP
Sbjct: 282 L----RRQSSD--RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCP 332
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
DK+ RV+GES+GI++LLQNEIGVD++V+DPV GSDEQIITISSEE PDD FPAQEALL
Sbjct: 333 ADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALL 392
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPAC 475
HIQT+I+DL DKDN+ITTRLLVPS + CLEG+ GS+SE+ R TG ++QIL+REE+P C
Sbjct: 393 HIQTQIIDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRC 452
Query: 476 VSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGS----ALVVE 531
S D ++QI GEI+AAR+ALVE+T LRS+++++ QKETPP+ST TG A V+E
Sbjct: 453 ASINDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTSTTGPLEGVAGVME 512
Query: 532 AASPIDITPAREVQTVTDPPAATHQSVQIPATSQPS-KEAAGSVSETVKQNESERREDVP 590
AS + +RE P +++ ++Q +T P KE GSV+ K ESE RE+VP
Sbjct: 513 VASSNNTIQSRE------GPTSSNLNLQQVSTILPQFKEGFGSVA---KAGESEHREEVP 563
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+R+ +PLVTRSTLEVVLP+ VPKL+TKS+ L + SE SGASV++VE +PE TQ I
Sbjct: 564 VTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNI 623
Query: 651 IQISGTPEQVERAQSVLQGFILSTQ 675
I+ISGTPEQ ERAQS+LQGFILS++
Sbjct: 624 IRISGTPEQAERAQSLLQGFILSSK 648
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 507/686 (73%), Gaps = 47/686 (6%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNY+YD QDYDGD+M R+KPRYN NNY G N
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYN------NNYHFGGGGGGGNNRYRGGGGGGG 53
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ + S+P+ M TTTYRILCHD KAGGVIGKSG+IIKSIRQHTGAWINVHEL+PG
Sbjct: 54 GNGRPSKSHPET---MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPG 110
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD---GGGGFYGEEEEEYGGG 177
D ERIIEISD RRRDP+GRMPSFSPAQEALF +HDRILES+ G GG EEEE+YGG
Sbjct: 111 DVERIIEISDNRRRDPDGRMPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGV 170
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
G RV TR+VVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ +LPRC
Sbjct: 171 RPGG--------GRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRC 222
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD--DDYVPH 295
VS+SEEIVQ+VG+++ VKNA+ I+SSRLRESQHRDRS+F GR HSP+R F DDY+P
Sbjct: 223 VSLSEEIVQIVGELSAVKNALLIVSSRLRESQHRDRSNFQGRSHSPERQFAAAGDDYIPQ 282
Query: 296 MNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
RR S D RF NYR+NN+ R S Y+ EA A P+ ++V Y E+LVF++LCP
Sbjct: 283 -----RRQSSD--RFPRGNYRNNNFSSRQSNYAEEAPAVPVGENV---YTEELVFQILCP 332
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
DK+ RV+GES+GI++LLQNEIGVD++V+DPV GSDEQIITISSEE PDD FPAQEALL
Sbjct: 333 ADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEAPDDPFFPAQEALL 392
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPAC 475
HIQT+I+DL DKDN+ITTRLLV S + CLEG+ GS+SE+ R TG ++QIL+REE+P C
Sbjct: 393 HIQTQIIDLLPDKDNLITTRLLVSSRDSVCLEGKAGSVSEISRLTGTSVQILAREEIPRC 452
Query: 476 VSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGS----ALVVE 531
S D ++QI G+I+AARDALVE+T LRS+++++ QKETPP+ST TG A V+E
Sbjct: 453 ASINDVVIQITGDIRAARDALVELTLLLRSHMFKELSQKETPPASTSTTGPLEGVAGVME 512
Query: 532 AASPIDITPAREVQTVTDPPAATHQSVQIPATSQPS-KEAAGSVSETVKQNESERREDVP 590
AS + +RE T ++ +Q +T P KE GSV+ K ESE RE+VP
Sbjct: 513 VASSNNTIQSREGLT------GSNLKLQQTSTILPQFKEGFGSVA---KAGESEHREEVP 563
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+R+ +PLVTRSTLEVVLP+ VPKL+TKS+ L + SE SGASV+LVE +PE TQ I
Sbjct: 564 VTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTLVEDRPEETQNI 623
Query: 651 IQISGTPEQVERAQSVLQGFILSTQD 676
I+ISGTPEQ ERAQS+LQGFILS Q+
Sbjct: 624 IRISGTPEQAERAQSLLQGFILSIQE 649
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/690 (58%), Positives = 523/690 (75%), Gaps = 61/690 (8%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKR+YYYD QDYD +T+ RT+ N+++ ++ ++
Sbjct: 1 MERSRSKRSYYYD-QDYDSETVARTR---------------PRYNHHHHHHRDSHRHRGG 44
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ +D L VTT+YR+LCHD++AGGVIGKSGSIIKSIRQHTGAWINVHE + G
Sbjct: 45 VGGGGRHYKTQDSPLTVTTSYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAG 104
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
DEERIIEISDTRRRDP+GRMP FSPAQEAL LIH+R+LE+D G E+EE+YGGG G
Sbjct: 105 DEERIIEISDTRRRDPDGRMPQFSPAQEALLLIHERLLENDPG----FEDEEDYGGGRGG 160
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
GG RV++R+VVS+MHVG LLGKGGKIIEQMR+ETKTQIRILPRD LPRCVSM
Sbjct: 161 -------GGKRVSSRLVVSKMHVGSLLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSM 213
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRS--------HFHGRLHSPDRFF-PDDD 291
SEEIVQV GDI+NVKNA +ISSRLRESQHRDRS FHGR HSP+RFF PDDD
Sbjct: 214 SEEIVQVTGDIHNVKNAFLVISSRLRESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDD 273
Query: 292 YVPHMNNTARRPSMD----GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED 347
Y+PH+++ +RRPS++ G+R + +N R+NN+ YS++ GAAP++ QPFY ED
Sbjct: 274 YLPHVSSGSRRPSVERSGFGSRIATTNSRNNNHA--SISYSMDQGAAPVAHDEQPFY-ED 330
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L+FR+LCP+D+V R++GES GI+ELLQ+ +GVD++++D V GSDEQ++ I+SEEGP+D +
Sbjct: 331 LIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTM 390
Query: 408 FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQIL 467
FPAQEALLHIQT IVDL D+IITTRL+VPSS+I CL+G++ SLSE+ RSTGA++QIL
Sbjct: 391 FPAQEALLHIQTHIVDLS---DSIITTRLIVPSSDIECLDGKNASLSEIERSTGASVQIL 447
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET-PPSSTGPTGS 526
REE+P C++ TDELVQIVGEI+AAR+ +++VT +LRSY+YRD Q +T PPS+ P+
Sbjct: 448 PREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDILQWDTVPPSAPLPS-- 505
Query: 527 ALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERR 586
VEA+S + + TV + A +Q++Q A + SKE+ GS +E KQ ES+RR
Sbjct: 506 ---VEASS------SNSMATVAE-TATANQNMQSVAVALASKESGGS-TEMGKQKESDRR 554
Query: 587 EDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEG 646
+D+PT +NR + LVTRS LEVV+P+YAVPKL+ KSK+ L + SE+SGA+V LVE +P+
Sbjct: 555 DDLPTGLNRT-VSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVEDRPDE 613
Query: 647 TQKIIQISGTPEQVERAQSVLQGFILSTQD 676
+KIIQISGTPEQ ER QS+LQGFILSTQ+
Sbjct: 614 KEKIIQISGTPEQAERGQSLLQGFILSTQE 643
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/688 (46%), Positives = 430/688 (62%), Gaps = 43/688 (6%)
Query: 1 MDRSRS-KRNYYYDHQDYDGDTMGRTKPRYNHYYQPN-NNYRHRGNNNNNTNNIMNNNTS 58
MDR RS KR Y+YD QD R+KPR++ PN NN HR
Sbjct: 1 MDRPRSSKRGYHYD-QD---SPPPRSKPRFDRRGGPNPNNSYHRRGPPGGGGGDRRGGFQ 56
Query: 59 INNSNNRANSNPKDPSLM--------VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ P PS +TT++RILC K V G S I +R T A
Sbjct: 57 LPPDAAPPPPPPPPPSSAAAGGGGPGMTTSFRILCPQSK---VYGFPPSFIAKVRDDTNA 113
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEE 170
+ +H PGD R+IE SD RR+ +GR PSFSPAQEAL ++H RILE++ G +E
Sbjct: 114 VVTIHLPYPGDAVRVIETSDGARREADGRPPSFSPAQEALLMVHRRILETEPDDG---DE 170
Query: 171 EEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR 230
+ EYG RG +V TR++V R+HVGCLLGKGGKIIEQMR ETKT IRILPR
Sbjct: 171 DGEYGPRAKDARD--RG---KVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPR 225
Query: 231 DHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDD 290
D PRCVS+SEE+VQVVG+ N VK AVAIIS RL+ES HRDR F GR++SP+ FP +
Sbjct: 226 DQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRMNSPEHRFPQE 285
Query: 291 DYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF 350
D + + P+ + R+N P GY ++ ++D + + +D++F
Sbjct: 286 DE--YYGGAQQMPAYEEPYGRPDQIRNNTSMELP-GYEFDSNGGKINDHTEILF-DDIIF 341
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+LCP DKV ++G +G++E+LQ ++GVD+++ D +DGSDE+II I+S EGPD ELFPA
Sbjct: 342 RILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPA 401
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSRE 470
QEALLH+QT IVDLG DKDNIITTRLLVPSSEI C EGRDGSLS+++R T AN+QIL R+
Sbjct: 402 QEALLHLQTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRQ 461
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT--GSAL 528
+P+C +DEL+QIVGEI+AARDALV++T +LRSY YR+ GP G+
Sbjct: 462 ALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI---------PGPNQLGNIT 512
Query: 529 VVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERRED 588
V + SP +P Q P + Q+ +PA+ K++ G + + +Q + +
Sbjct: 513 VHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPAS---WKDSGGGANMSFEQGSNINDDM 569
Query: 589 VPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ 648
+ R +PLVTRSTLEVV+P AV L ++ + L + SEMSGA+V+L + +P+ +
Sbjct: 570 RQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIE 629
Query: 649 KIIQISGTPEQVERAQSVLQGFILSTQD 676
K+++ISGTPEQ ++AQS+LQGFILS QD
Sbjct: 630 KVVRISGTPEQADKAQSLLQGFILSIQD 657
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 320/687 (46%), Positives = 430/687 (62%), Gaps = 43/687 (6%)
Query: 1 MDRSRS-KRNYYYDHQDYDGDTMGRTKPRYNHYYQPN-NNYRHRGNNNNNTNNIMNNNTS 58
MDR RS KR Y+YD QD R+KPR++ PN NN HR
Sbjct: 1 MDRPRSSKRGYHYD-QD---SPPPRSKPRFDRRGGPNPNNSYHRRGPPGGGGGDRRGGFQ 56
Query: 59 INNSNNRANSNPKDPSLM--------VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ P PS +TT++RILC K V G S I +R T A
Sbjct: 57 LPPDAAPPPPPPPPPSSAAAGGGGPGMTTSFRILCPQSK---VYGFPPSFIAKVRDDTNA 113
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEE 170
+ +H PGD R+IE SD RR+ +GR PSFSPAQEAL ++H RILE++ G +E
Sbjct: 114 VVTIHLPYPGDAVRVIETSDGARREADGRPPSFSPAQEALLMVHRRILETEPDDG---DE 170
Query: 171 EEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR 230
+ EYG RG +V TR++V R+HVGCLLGKGGKIIEQMR ETKT IRILPR
Sbjct: 171 DGEYGPRAKDARD--RG---KVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPR 225
Query: 231 DHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDD 290
D PRCVS+SEE+VQVVG+ N VK AVAIIS RL+ES HRDR F GR++SP+ FP +
Sbjct: 226 DQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRMNSPEHRFPQE 285
Query: 291 DYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF 350
D + + P+ + R NN P GY ++ ++D + + +D++F
Sbjct: 286 DE--YYGGAQQMPAYEEPYGRPDQIR-NNTSMEPPGYEFDSNGGKINDHTEILF-DDIIF 341
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+LCP DKV ++G +G++E+LQ ++GVD+++ D +DGSDE+II I+S EGPD ELFPA
Sbjct: 342 RILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPA 401
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSRE 470
QEALLH+QT IVDLG DKDNIITTRLLVPSSEI C EGRDGSLS+++R T AN+QIL R+
Sbjct: 402 QEALLHLQTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRQ 461
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT--GSAL 528
+P+C +DEL+QIVGEI+AARDALV++T +LRSY YR+ GP G+
Sbjct: 462 ALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI---------PGPNQLGNIT 512
Query: 529 VVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERRED 588
V + SP +P Q P + Q+ +PA+ K++ G + + +Q + +
Sbjct: 513 VHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPAS---WKDSGGGANMSFEQGSNINDDM 569
Query: 589 VPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ 648
+ R +PLVTRSTLEVV+P AV L ++ + L + SEMSGA+V+L + +P+ +
Sbjct: 570 RQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIE 629
Query: 649 KIIQISGTPEQVERAQSVLQGFILSTQ 675
K+++ISGTPEQ ++AQS+LQGFILS++
Sbjct: 630 KVVRISGTPEQADKAQSLLQGFILSSK 656
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 317/694 (45%), Positives = 428/694 (61%), Gaps = 51/694 (7%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPN-----NNYRHRG-----NNNNNTN 50
MDRSRSKR Y+YD + R+KPR++ +NY RG ++
Sbjct: 1 MDRSRSKRGYHYD----EDSPPPRSKPRFDRRGGGGGPNPNSNYHRRGPTGGGGGSDRRG 56
Query: 51 NIMNNNTSINNSNNRANSNPKDPSLMV--------TTTYRILCHDMKAGGVIGKSGSIIK 102
+ ++ + A ++ T++RILC + K G S I
Sbjct: 57 GFIPSDGAPPPLPPPALPPSSSATIGGGGPGGPGQATSFRILCPESKTYGF---PASFII 113
Query: 103 SIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDG 162
+ +GA I +H GD R+IE++D RD +GR P FSPAQEAL ++H RILE++
Sbjct: 114 KAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDVDGRPPMFSPAQEALIMVHRRILETEP 173
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETK 222
G +E+ EYG G RG +V TR+VV R+HVGCLLGKGGKIIEQMR ETK
Sbjct: 174 DDG---DEDGEYGPRGKDARD--RG---KVTTRLVVPRLHVGCLLGKGGKIIEQMRSETK 225
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS 282
T IRILPRD + PRCVS+SEE+VQ+VG+ N VK AVAIIS RL+ES HRDR F GR
Sbjct: 226 THIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRNSP 285
Query: 283 PDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP 342
R D+Y + P+ + F+ + NN P GY ++ + ++ +
Sbjct: 286 EHRISQADEY-------QQMPAYEEP-FARFDQIRNNGSMEPPGYEFDSNGSKFNEHPE- 336
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
F ++++FR+LCP DK ++G +GI+E+LQ E+GVD+++ D V GSDE+ + I+S EG
Sbjct: 337 FPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREG 396
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGA 462
PD ELFPAQEALLHIQT IVDLG D DNIITTRLLVPSSE+ C EGRDGSLS+++R T A
Sbjct: 397 PDHELFPAQEALLHIQTHIVDLGPDNDNIITTRLLVPSSEVACFEGRDGSLSDIQRQTSA 456
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
N+QIL REE+P+C +DEL+QIVG I+AAR AL++VTT++RSY+YR+ S
Sbjct: 457 NVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKIRSYIYREM-------SVPN 509
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNE 582
S V + P + +P R + D P A +Q Q TS SK++ GS S + +Q
Sbjct: 510 QIASINVHGSIPPANGSP-RGIYPGNDLPMAIYQQSQQMTTSWHSKDSGGSASGSFEQG- 567
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
S +D+ + I R +PLVTRSTLEVV+P AV L ++ + L + SEMSGASV+L E
Sbjct: 568 SNINDDIRSTIKRFAVPLVTRSTLEVVIPKSAVASLSMRAGSKLAQISEMSGASVTLGED 627
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
+P +K+++ISGTPEQ ++AQS+LQGFILS QD
Sbjct: 628 RPGVMEKVVRISGTPEQADKAQSLLQGFILSIQD 661
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/696 (44%), Positives = 426/696 (61%), Gaps = 54/696 (7%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNN--------- 51
MDRSRSKR Y+YD + R R N++Y RG ++
Sbjct: 1 MDRSRSKRGYHYDQDSPPPRSKQRFDRRSGGGQNANSSYHRRGPLGGGGSDRRGFLPPAP 60
Query: 52 -IMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ A + TT++RILC + KA G + +R +GA
Sbjct: 61 APPPPPPPPPLPPSSATAGGGAGPTTTTTSFRILCPECKAYGF---PPGFVAKVRDDSGA 117
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGG------ 164
+ VH GD R+IE D RR+ +GR P FSPAQEAL ++H RILE+D
Sbjct: 118 LVTVHPPFAGDYVRVIETVDGARREADGRPPMFSPAQEALLMVHRRILETDADDGDEDGE 177
Query: 165 -GFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
G G++ + G + TR++V +MHVGCLLGKGGKIIEQMRMETKT
Sbjct: 178 YGPRGKDSRDRG---------------KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKT 222
Query: 224 QIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSP 283
IRILPRD PRCVS+SEE+VQVVGD N VK AVAII+ RL+ES HRDR F GR++SP
Sbjct: 223 HIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESLHRDRGPFRGRMNSP 282
Query: 284 D-RFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP 342
+ R +DDY+ ++ P+ + + S+ NN P GY ++ + +
Sbjct: 283 EPRISQEDDYL----GVSQMPAYEES-LGRSDQIRNNTSMEPPGYEFDSNDGKVIEHPDI 337
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
Y +D++FR+LCP DKV ++ ++GI+E+LQ ++GVD++++D + GSDE+++ I+S EG
Sbjct: 338 LY-DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREG 396
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGA 462
PD ELFPAQEA+LHIQT IVDLG DKDNIITTRLLVPSSEI C +GR+GSLS+++R T A
Sbjct: 397 PDHELFPAQEAVLHIQTHIVDLGPDKDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSA 456
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
N+QIL +E++P C +DEL+QIVGEI AAR+AL++VTT+LRS+LYR+ +G
Sbjct: 457 NVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYREM---------SG 507
Query: 523 P--TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQ 580
P G+ V A SP+ +P P +A HQ+ Q+ ATS SK++ GS S + Q
Sbjct: 508 PIQVGNINVHGAISPVAGSPGGPNLGNDMPMSAYHQASQL-ATSWHSKDSGGSASGSFDQ 566
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+ E R +PLVTRSTLEVV+P+ AV L ++ + L + SE+SGA+V+L
Sbjct: 567 GSNIIDEIRQGATKRFAVPLVTRSTLEVVIPNSAVASLTMRAGSKLAQISEISGATVTLA 626
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
E +P+ +K+++ISGTPEQ +A+++LQGFILS D
Sbjct: 627 EDRPDILEKVVRISGTPEQASKAENLLQGFILSIPD 662
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/600 (49%), Positives = 397/600 (66%), Gaps = 25/600 (4%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT++RILC + KA G S I + + +GA I +H PGD R+IE +D R+ +
Sbjct: 108 TTSFRILCPESKAYGF---PASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREAD 164
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
GR P FSPAQEAL ++H RILE+ G +E+ EYG G RG +V TR++
Sbjct: 165 GRPPMFSPAQEALLMVHRRILETQPDDG---DEDGEYGPRGK--DARDRG---KVTTRLI 216
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R HVGCLLGKGGKIIEQMR ETKT IRILPR+ ++PRC+S+SE++VQVVG+ NNVK A
Sbjct: 217 VPRQHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKA 276
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPD-RFFPDDDYVPHMNNTARRPSMDGARFSGSNYR 316
VAIIS RL+ES HRDR F +SP+ R D+Y + + P+ + R
Sbjct: 277 VAIISDRLKESLHRDRGPFLRGRNSPEHRISQADEY---LGGGQQMPAFEEPYPRFDQIR 333
Query: 317 SNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
NN P GY ++ + ++ + Y E ++FR+LCP DK ++G +GI+++LQ E
Sbjct: 334 -NNGSMEPPGYEFDSNGSKFNEHPEIPYDE-IIFRILCPNDKAISLVGSRDGIIDMLQAE 391
Query: 377 IGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRL 436
+GVD+++ D + GSDE+ + I+S EGPD ELFPAQEALLHIQT IVDLG DKDNIITTRL
Sbjct: 392 VGVDVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHIQTFIVDLGPDKDNIITTRL 451
Query: 437 LVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDAL 496
LVPSSEI C EGRDGSLS+++R T AN+QIL REE+P+C +DEL+QIVGEI+AAR+AL
Sbjct: 452 LVPSSEIACFEGRDGSLSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNAL 511
Query: 497 VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ 556
++VTT+LRSY+YR+ P+ G V + SP +P R + D P +Q
Sbjct: 512 MQVTTKLRSYIYREM------PAPIQ-IGGINVHGSISPAKGSP-RGLYAGNDLPMPIYQ 563
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
ATS SK++ S S + +Q S + + R +PLVTRSTLEVV+P AV
Sbjct: 564 QAPQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNTKRYAVPLVTRSTLEVVIPQSAVA 623
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
L ++ + L + SEMSGASV+L E +P T+K+++ISGTPEQ ++AQS+LQGFILS QD
Sbjct: 624 SLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISGTPEQADKAQSLLQGFILSIQD 683
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 312/696 (44%), Positives = 425/696 (61%), Gaps = 57/696 (8%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
MDRSRSKR Y+YD D T R+K R++ R G N N++
Sbjct: 1 MDRSRSKRGYHYDQ---DSPT-SRSKQRFD---------RRSGGQNANSSYHRRGPPGGG 47
Query: 61 NSNNRA-----------------NSNPKD--PSLMVTTTYRILCHDMKAGGVIGKSGSII 101
S+ R +S D TT++RILC + KA S +
Sbjct: 48 GSDRRGFLPPDAAPPPPPPPPPPSSATADGGAGSTATTSFRILCPECKAYSF---SPGFV 104
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD 161
+R +GA + VH GD R+IE D RR+ +G P FSPAQEAL ++H RILE+D
Sbjct: 105 AKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGCPPMFSPAQEALLMVHRRILETD 164
Query: 162 GGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMET 221
G+E+ EYG G RG + TR++V + HVGCLLGKGGKIIEQMRMET
Sbjct: 165 A---DDGDEDGEYGPRGK--DARDRG---KTTTRLIVPKQHVGCLLGKGGKIIEQMRMET 216
Query: 222 KTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH 281
KT IRIL R PRCVS SEE+VQVVGD N VK AVAII+ RL+ES HRDR F GRL+
Sbjct: 217 KTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITDRLKESLHRDRGPFRGRLN 276
Query: 282 SPD-RFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSV 340
SP+ R +D+Y + + P+ + G + NN P GY ++ + +
Sbjct: 277 SPEPRISQEDEY---LGGVQQMPAYVES-LGGPDQIRNNISMEPPGYVFDSNGGKVIEHP 332
Query: 341 QPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE 400
Y ED++FR+LCP DK ++ +GI+E+LQ ++GVD++++D SDE+++ I+S
Sbjct: 333 DILY-EDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSR 391
Query: 401 EGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRST 460
EGPD ELFPAQEA+LHIQT IVDLG D DNIITTRLLVP+SEI C +GR+GSLS+++R T
Sbjct: 392 EGPDHELFPAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSLSDIQRQT 451
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSS 520
AN+QIL RE++P+C +DEL+QIVGEI+AAR+AL++VTT+LRS+LYR E P
Sbjct: 452 SANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYR-----EMPDPI 506
Query: 521 TGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQ 580
G+ + A SP+ +P Q P A HQ+ Q+ ATS SK++ GS S + +Q
Sbjct: 507 Q--VGNINLHGAISPVAGSPRGPYQGNDIPMGAYHQASQL-ATSWHSKDSGGSASGSFEQ 563
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+ + + R +PLVTRSTLE+V+P+ AV L ++ + L + SE+SGA+V+L
Sbjct: 564 GSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLA 623
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
E + + QK+++ISGTPEQ +A+++LQGFILS D
Sbjct: 624 EDRSDILQKVVRISGTPEQASKAENLLQGFILSIPD 659
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 265/600 (44%), Positives = 361/600 (60%), Gaps = 54/600 (9%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNN--------- 51
MDRSRSKR Y+YD + R R N++Y RG ++
Sbjct: 1 MDRSRSKRGYHYDQDSPPPRSKQRFDRRSGGGQNANSSYHRRGPLGGGGSDRRGFLPPAP 60
Query: 52 -IMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ A + TT++RILC + KA G + +R +GA
Sbjct: 61 APPPPPPPPPLPPSSATAGGGAGPTTTTTSFRILCPECKAYGF---PPGFVAKVRDDSGA 117
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGG------ 164
+ VH GD R+IE D RR+ +GR P FSPAQEAL ++H RILE+D
Sbjct: 118 LVTVHPPFAGDYVRVIETVDGARREADGRPPMFSPAQEALLMVHRRILETDADDGDEDGE 177
Query: 165 -GFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
G G++ + G + TR++V +MHVGCLLGKGGKIIEQMRMETKT
Sbjct: 178 YGPRGKDSRDRG---------------KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKT 222
Query: 224 QIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSP 283
IRILPRD PRCVS+SEE+VQVVGD N VK AVAII+ RL+ES HRDR F GR++SP
Sbjct: 223 HIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESLHRDRGPFRGRMNSP 282
Query: 284 D-RFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP 342
+ R +DDY+ ++ P+ + + S+ NN P GY ++ + +
Sbjct: 283 EPRISQEDDYL----GVSQMPAYEES-LGRSDQIRNNTSMEPPGYEFDSNDGKVIEHPDI 337
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
Y +D++FR+LCP DKV ++ ++GI+E+LQ ++GVD++++D + GSDE+++ I+S EG
Sbjct: 338 LY-DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREG 396
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGA 462
PD ELFPAQEA+LHIQT IVDLG DKDNIITTRLLVPSSEI C +GR+GSLS+++R T A
Sbjct: 397 PDHELFPAQEAVLHIQTHIVDLGPDKDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSA 456
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
N+QIL +E++P C +DEL+QIVGEI AAR+AL++VTT+LRS+LYR+ +G
Sbjct: 457 NVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYREM---------SG 507
Query: 523 P--TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQ 580
P G+ V A SP+ +P P +A HQ+ Q+ ATS SK++ GS S + Q
Sbjct: 508 PIQVGNINVHGAISPVAGSPGGPNLGNDMPMSAYHQASQL-ATSWHSKDSGGSASGSFDQ 566
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 233/644 (36%), Positives = 342/644 (53%), Gaps = 93/644 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI------------ 128
+RILC + G VIGK GSIIK++RQ TGA I + + IPG +ER+I I
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 129 --------------SDTRRRD--PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
D R D GR + PAQ ALF +H RIL++D + E+
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVA-CPAQLALFKVHSRILDAD-------KYED 173
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
+ V +V TRM+V VGCLLGK G+IIEQMR ET +QIRILPR+
Sbjct: 174 DLDDSDSVE----EDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQ 229
Query: 233 SLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR----SHFHGRLHSPDR--- 285
LP C ++E+VQVVGD +VK A+ IS+RL ++ +DR S G R
Sbjct: 230 -LPVCALPTDEVVQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSG 288
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY------GPRPSGYSIEAGAAPMSDS 339
F + Y+P + A + + S S N Y P S + PM
Sbjct: 289 FPASEPYIPQHTSLAPQTRLRAEPRSDSG--DNGYQLLRPTAPGLSEFGTGRHLVPMD-- 344
Query: 340 VQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS 399
E+LVFR+LCP +K+G +IG+ ++ LQ E G + V D V G +E++I +S+
Sbjct: 345 ------EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSA 395
Query: 400 EEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
E PDD+L PAQEA+ HIQ ++ D G + + TRLLVPS+ +GCL G+ G+ +SEMR
Sbjct: 396 VESPDDDLSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRN 455
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR-------DF 511
ST A I++L RE++P C DE+VQ++GEI+ ARDALV++T+RLR+ LYR D+
Sbjct: 456 STRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDY 515
Query: 512 -FQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPA-TSQPSKE 569
+Q+ T P S ++A+ P I R PP+ Q + A P
Sbjct: 516 GYQRSTSPLSN------FGLQASQPPGIQAPRS------PPSWLLQQTERGAYNGLPRLT 563
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
+ + + + R +PT + L +VT + ++V++P+ ++ ++ LT+
Sbjct: 564 SYAGIERSY--GLAGDRSALPTGLTN--LSVVTSTKIDVLIPEVTFSAVLGQNGDNLTQI 619
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
S+MSGA V+L +G ++I+ISGTP+Q A++V++ F S
Sbjct: 620 SKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAAS 663
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 342/667 (51%), Gaps = 112/667 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI------------ 128
+RILC + G VIGK GSIIK++RQ TGA I + + IPG +ER+I I
Sbjct: 2 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 61
Query: 129 --------------SDTRRRD--PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
D R D GR + PAQ ALF +H RIL++D + E+
Sbjct: 62 YPAGSGGGAPAALDKDDRAMDEYTNGRDVA-CPAQLALFKVHSRILDAD-------KYED 113
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
+ V +V TRM+V VGCLLGK G+IIEQMR ET +QIRILPR+
Sbjct: 114 DLDDSDSVE----EDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQ 169
Query: 233 SLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR----SHFHGRLHSPDR--- 285
LP C ++E+VQVVGD +VK A+ IS+RL ++ +DR S G R
Sbjct: 170 -LPVCALPTDEVVQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSG 228
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY------GPRPSGYSIEAGAAPMSDS 339
F + Y+P + A + + S S N Y P S + PM
Sbjct: 229 FPASEPYIPQHTSLAPQTRLRAEPRSDSG--DNGYQLLRPTAPGLSEFGTGRHLVPMD-- 284
Query: 340 VQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS 399
E+LVFR+LCP +K+G +IG+ ++ LQ E G + V D V G +E++I +S+
Sbjct: 285 ------EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSA 335
Query: 400 EEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
E PDD+L PAQEA+ HIQ ++ D G + + TRLLVPS+ +GCL G+ G+ +SEMR
Sbjct: 336 VESPDDDLSPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRN 395
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR-------DF 511
ST A I++L RE++P C DE+VQ++GEI+ ARDALV++T+RLR+ LYR D+
Sbjct: 396 STRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDY 455
Query: 512 -FQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEA 570
+Q+ T P S ++A+ P I R PP+ Q V IP S S+
Sbjct: 456 GYQRSTSPLSN------FGLQASQPPGIQAPRS------PPSWLLQQVLIPPPSFKSRLT 503
Query: 571 AGSVSETVKQNESERREDVPTVINRVPLPL------------------------VTRSTL 606
+ K++ NR L L VT + +
Sbjct: 504 SFLPCLDRKRSLQWFATAYKLCWNREKLWLGRRSFGLADWPYQVSHSIQRHLSVVTSTKI 563
Query: 607 EVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSV 666
+V++P+ ++ ++ LT+ S+MSGA V+L +G ++I+ISGTP+Q A++V
Sbjct: 564 DVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTV 623
Query: 667 LQGFILS 673
++ F S
Sbjct: 624 VEAFAAS 630
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 115/202 (56%), Gaps = 36/202 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+RILC K G +IGK I+++++ TGA INV + +PG EER+I +S D +
Sbjct: 288 VFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD-- 342
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SPAQEA+F I D+ L DG GE E RV TR++V
Sbjct: 343 ---LSPAQEAVFHIQDK-LRDDG-----GETSE------------------RVVTRLLVP 375
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
HVGCLLGKGG II +MR T+ IR+L R+ LP C ++E+VQV+G+I ++A+
Sbjct: 376 SNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQ-LPLCALDNDEVVQVLGEIRVARDALV 434
Query: 260 IISSRLRESQHR---DRSHFHG 278
I+SRLR + +R DRS +G
Sbjct: 435 QITSRLRANLYREKTDRSDDYG 456
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 46/201 (22%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS--EEGPDDE 406
+FR+LCP ++G VIG+ I++ L+ + G +K+AD + GSDE++I I + EG DE
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 407 LF------------------------------PAQEALLHIQTRIVDLGADKDNI----- 431
+ PAQ AL + +RI+D +D++
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 432 --------ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDEL 482
+ TR+LVP +++GCL G+ G + E MR TG+ I+IL RE++P C TDE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 483 VQIVGEIQAARDALVEVTTRL 503
VQ+VG+ + + AL ++TRL
Sbjct: 181 VQVVGDRPSVKRALNAISTRL 201
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/449 (42%), Positives = 268/449 (59%), Gaps = 44/449 (9%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR----- 133
+RILC K G VIGK GSIIK++RQ +GA I + + IPG +ER+I IS T R
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDRG 62
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
R +G +PAQEALF +H RI+ G G ++EE +V
Sbjct: 63 RGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPS-------------QQVV 109
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
TR++V +GCLLGKGGKIIEQMR T QIR+LP+D LP C ++E+VQV GD++
Sbjct: 110 TRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQ-LPGCALPTDELVQVSGDVST 168
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+K A+ IS+RL+E+ RDR + F P DY+ + D R G+
Sbjct: 169 LKKALLFISARLQENPPRDRPQSYA--APAPAFVPVTDYL----------AKDSYRSKGT 216
Query: 314 NYRSNNYGPRP---SGYSIEAGAAPM--SDSVQPFYGED-----LVFRMLCPIDKVGRVI 363
+ GP P ++I +G + D+ + G D LVFR+LCP DK+G VI
Sbjct: 217 GH-VFGLGPEPLEGRSWTISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVI 275
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRI-V 422
G+ I+ L+ + G +K+A+ V GSDE++I +S+ E P D PA EA++ +Q+RI
Sbjct: 276 GKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITA 335
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDE 481
++G DKD IITTRLLVP+++IGCL G+ GS+ E MRR+T ANI++L ++ +P C TDE
Sbjct: 336 EMGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDE 395
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRD 510
LVQIVG+ AR+AL +V +RLR+ +R+
Sbjct: 396 LVQIVGDTTVAREALFQVISRLRNNAFRE 424
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 122/196 (62%), Gaps = 22/196 (11%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS------ 399
+D+VFR+LCP K+G VIG+ I++ L+ E G +K+AD + G DE++I ISS
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 400 ----EEGPDDELFPAQEALLHIQTRIV-DL------GADKD----NIITTRLLVPSSEIG 444
++G +EL PAQEAL + RI+ D+ G+D++ + TRLLVP+++IG
Sbjct: 61 RGRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIG 120
Query: 445 CLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
CL G+ G + E MR++TGA I++L ++++P C TDELVQ+ G++ + AL+ ++ RL
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 504 RSYLYRDFFQKETPPS 519
+ RD Q P+
Sbjct: 181 QENPPRDRPQSYAAPA 196
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 254/479 (53%), Gaps = 79/479 (16%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
YRILC K G VIGK GSIIKS+R TGA I V + IPG +ER+I IS + R EG
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERREG 105
Query: 139 R---------------------MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
+ +P+ +QEALF + RI+E +
Sbjct: 106 KPRGGSKEMDKDKEQNGEESTPLPA---SQEALFKVFARIVEGEEFDEDEDSSRN----- 157
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
V R++V +GCLLGK GKIIEQMR+E+ QIR+LPR+ LP+C
Sbjct: 158 --------------VTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQ-LPKC 202
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMN 297
++E+VQ+ G++ VK A+ IS+RL ++ RD+ G L F + +P
Sbjct: 203 AYHTDELVQLTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGP----FQESTILP--- 255
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPID 357
T P GA F N S+ P GE R+LCP +
Sbjct: 256 GTLLPP---GAFFPQGNA-----------------------SIAPVEGE-FAVRLLCPNE 288
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHI 417
K+G VIG+ I+ ++ E +K+AD V ++E++I I+S E +++ PA EA+L +
Sbjct: 289 KIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQL 348
Query: 418 QTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
Q+RI D A+KD +TTR LVPS+ IGCL G+ GS +++MRR+T ANI++LS+E +P C
Sbjct: 349 QSRISDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCA 408
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASP 535
DELVQ+VG+I ARDA++E+ TRLR+ ++ + + + G GS V P
Sbjct: 409 HEDDELVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSSNPGLGVQGSVPVSSTYEP 467
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 128/245 (52%), Gaps = 54/245 (22%)
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
EA A P+ +D+V+R+LCP K+G VIG+ I++ L+NE G +KVAD + G
Sbjct: 37 EAAAPPV---------DDVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPG 87
Query: 390 SDEQIITISS----------------------EEGPDDELFPA-QEALLHIQTRIVDLGA 426
SDE++I IS+ + G + PA QEAL + RIV+
Sbjct: 88 SDERVIFISASPRERREGKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEE 147
Query: 427 DKDNI-----ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTD 480
++ +T RLLVPS++IGCL G+ G + E MR +GA I++L RE++P C TD
Sbjct: 148 FDEDEDSSRNVTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTD 207
Query: 481 ELVQIVGEIQAARDALVEVTTRLRSYLYRDF---------FQKET-------PPSSTGPT 524
ELVQ+ GE+ + AL ++TRL RD FQ+ T PP + P
Sbjct: 208 ELVQLTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGPFQESTILPGTLLPPGAFFPQ 267
Query: 525 GSALV 529
G+A +
Sbjct: 268 GNASI 272
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 110/248 (44%), Gaps = 63/248 (25%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
R+LC + K G VIGK G II+SIR+ T A I + + + EER+I I+ E
Sbjct: 280 AVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSN-----EVL 334
Query: 140 MPSFSPAQEALFLIHDRI----LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
SPA EA+ + RI E DG + TR
Sbjct: 335 HEQVSPALEAVLQLQSRISDPSAEKDGA----------------------------MTTR 366
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+V ++GCLLGK G II MR T+ IR+L ++ +LP+C +E+VQVVGDI +
Sbjct: 367 FLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKE-ALPKCAHEDDELVQVVGDITVAR 425
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+AV I +RLR + + HM N + P G GS
Sbjct: 426 DAVIEIITRLRA----------------------NIFSEHMKNVSSNP---GLGVQGSVP 460
Query: 316 RSNNYGPR 323
S+ Y PR
Sbjct: 461 VSSTYEPR 468
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 211/717 (29%), Positives = 344/717 (47%), Gaps = 118/717 (16%)
Query: 35 PNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVI 94
P+ + N N N+ N S+P +RILC K G V
Sbjct: 7 PSKRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSP------AAVVFRILCPAPKIGTVT 60
Query: 95 GKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR-------------------- 134
G+ G++I IRQ TGA + V E IPG +E+II I+ + +
Sbjct: 61 GEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAE 120
Query: 135 --------------------DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEY 174
+ G + S Q+AL L+ ++ E+D G+EE
Sbjct: 121 ESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMFEADPVTD-GGDEEN-- 177
Query: 175 GGGGGVGGGGFRGGGNRVAT---RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD 231
N+ +T R++V VGCLLGKGG +I+QM E+ QIRI PRD
Sbjct: 178 ---------------NKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRD 222
Query: 232 HSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDD 291
LP C S+S+E+V++ G+I+ V+ A+ +S +L E+ RD F P
Sbjct: 223 R-LPICSSVSDELVEITGEIDAVRKALQSVSKQLLENPPRDHDSFPAN--------PSGT 273
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
++ RP R S S R Y R S + + + D ++P + L FR
Sbjct: 274 SSHSSGHSHPRPEAYLQRHSFSG-RGKPYAVR----SRDRHESVIQDQMKPVP-DVLTFR 327
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
+LC ++VG VIG+ I+++L+ E G D+KV + V S++++I IS PDD + Q
Sbjct: 328 LLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRISAPQ 387
Query: 412 EALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSRE 470
+A++ +QTRI ++K+ I RLLV S++IGCL G+ G+ +SEMR+S+GA I+IL ++
Sbjct: 388 DAVIRVQTRIAMAISNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRKSSGAYIRILGKD 447
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF------------------ 512
++P C S ++ +VQI GE + ++AL+++TTRLR + +++ F
Sbjct: 448 QIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFFQNLFPSMDHLSNPAFLDQVPPF 507
Query: 513 -----QKE-TPPSSTGPTGSALVVEAASPIDITPARE-----VQTVTDPPAATHQSVQIP 561
+KE +PP + P +V A P P + + + P H + + P
Sbjct: 508 PPYMGRKELSPPFHSFPNFDGMV--GAPPHVSFPPHDDHPPFMHNIHRPGMPPHIAERKP 565
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLP-LVTRSTLEVVLPDYAVPKLIT 620
Q E G + +RR + V P ++T +T+EV++P VP +
Sbjct: 566 WGPQGFVEGGGPMGLPDFAGPPQRRI---SGFGGVSHPAIITSTTIEVIVPRTIVPVIYG 622
Query: 621 KSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
+ L + ++S A +++ E +P ++ +I ISGTPEQ AQS++Q F++S +++
Sbjct: 623 EDGACLKQIRQISDAKITINEPKPGASETVIIISGTPEQTHAAQSLIQAFVMSERES 679
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 175/474 (36%), Positives = 250/474 (52%), Gaps = 73/474 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
YRILC K G VIGK GSIIKS+R TGA I V + IPG +ER+I IS RR+ +
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGKP 105
Query: 139 RMPS----------------FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
R S +QEALF + RI+E +
Sbjct: 106 RGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN---------- 155
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
V R++V +GCLLGK GKIIEQMR+E+ QIR+LPR+ LP+C ++
Sbjct: 156 ---------VTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQ-LPKCAYHTD 205
Query: 243 EIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR 302
E++ G++ VK A+ IS+RL ++ RD+ G L F + +P T
Sbjct: 206 ELL--TGELALVKKALTTISTRLYDNPPRDKPPQAGHLGP----FQESTILP---GTLLP 256
Query: 303 PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRV 362
P GA F N S+ P GE R+LCP +K+G V
Sbjct: 257 P---GAFFPQGNA-----------------------SIAPVEGE-FAVRLLCPNEKIGSV 289
Query: 363 IGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIV 422
IG+ I+ ++ E +K+AD V ++E++I I+S E +++ PA EA+L +Q+RI
Sbjct: 290 IGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRIS 349
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE 481
D A+KD +TTR LVPS+ IGCL G+ GS +++MRR+T ANI++LS+E +P C DE
Sbjct: 350 DPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHEDDE 409
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASP 535
LVQ+VG+I ARDA++E+ TRLR+ ++ + + + G GS V P
Sbjct: 410 LVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSSNPGLGVQGSVPVSSTYEP 463
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 125/243 (51%), Gaps = 54/243 (22%)
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
EA A P+ +D+V+R+LCP K+G VIG+ I++ L+NE G +KVAD + G
Sbjct: 37 EAAAPPV---------DDVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPG 87
Query: 390 SDEQIITISSEE--------------------GPDDELFPA-QEALLHIQTRIVDLGADK 428
SDE++I IS E G + PA QEAL + RIV+
Sbjct: 88 SDERVIFISPRERREGKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFD 147
Query: 429 DNI-----ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDEL 482
++ +T RLLVPS++IGCL G+ G + E MR +GA I++L RE++P C TDEL
Sbjct: 148 EDEDSSRNVTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDEL 207
Query: 483 VQIVGEIQAARDALVEVTTRLRSYLYRDF---------FQKET-------PPSSTGPTGS 526
+ GE+ + AL ++TRL RD FQ+ T PP + P G+
Sbjct: 208 --LTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGPFQESTILPGTLLPPGAFFPQGN 265
Query: 527 ALV 529
A +
Sbjct: 266 ASI 268
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 110/246 (44%), Gaps = 63/246 (25%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC + K G VIGK G II+SIR+ T A I + + + EER+I I+ E
Sbjct: 278 RLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSN-----EVLHE 332
Query: 142 SFSPAQEALFLIHDRI----LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
SPA EA+ + RI E DG + TR +
Sbjct: 333 QVSPALEAVLQLQSRISDPSAEKDGA----------------------------MTTRFL 364
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V ++GCLLGK G II MR T+ IR+L ++ +LP+C +E+VQVVGDI ++A
Sbjct: 365 VPSANIGCLLGKKGSIIADMRRNTRANIRVLSKE-ALPKCAHEDDELVQVVGDITVARDA 423
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
V I +RLR + + HM N + P G GS S
Sbjct: 424 VIEIITRLRA----------------------NIFSEHMKNVSSNP---GLGVQGSVPVS 458
Query: 318 NNYGPR 323
+ Y PR
Sbjct: 459 STYEPR 464
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 195/280 (69%), Gaps = 8/280 (2%)
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEM 456
+ S GPD ELFPAQEA+LHIQT IVDLG D DNIITTRLLVP+SEI C +GR+GSLS++
Sbjct: 150 VDSRRGPDHELFPAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGSLSDI 209
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
+R T AN+QIL RE++P+C +DEL+QIVGEI+AAR+AL++VTT+LRS+LYR+
Sbjct: 210 QRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYREM----- 264
Query: 517 PPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSE 576
P G+ + A SP+ +P Q P A HQ+ Q+ ATS SK++ GS S
Sbjct: 265 -PDPIQ-VGNINLHGAISPVAGSPRGPYQGNDIPMGAYHQASQL-ATSWHSKDSGGSASG 321
Query: 577 TVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGAS 636
+ +Q + + + R +PLVTRSTLE+V+P+ AV L ++ + L + SE+SGA+
Sbjct: 322 SFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAA 381
Query: 637 VSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
V+L E + + QK+++ISGTPEQ +A+++LQGFILS D
Sbjct: 382 VTLAEDRSDILQKVVRISGTPEQASKAENLLQGFILSIPD 421
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
N + TR++V + C G+ G + + R +T ++ILPR+ LP C S+E++Q+VG
Sbjct: 183 NIITTRLLVPASEIACFDGREGSLSDIQR-QTSANVQILPRED-LPSCALESDELIQIVG 240
Query: 250 DINNVKNAVAIISSRLRESQHRD 272
+I +NA+ ++++LR +R+
Sbjct: 241 EIKAARNALIQVTTKLRSFLYRE 263
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 223/340 (65%), Gaps = 19/340 (5%)
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
F GE+LVFR+LCP K+G VIG + I++ LQ++IG +K+ D V GSDE+II IS+ E
Sbjct: 17 FSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEV 76
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+D L PAQEALLHIQ++IVDLG DKD +ITT+LL+PS++ GCL G+ G+ +SEMR+ T
Sbjct: 77 LEDNLSPAQEALLHIQSQIVDLGPDKDGVITTKLLIPSNQTGCLLGKGGAIISEMRKQTR 136
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
ANI+IL RE++P C +DE+VQIVG+I+AAR ALV+VT+RLRS+++R+
Sbjct: 137 ANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFIHREI---------- 186
Query: 522 GPTGSALVVEAASPID----ITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSET 577
G +G L +A + P+ ++ + S +P + PSKE +G
Sbjct: 187 GISGPFLSSSSAPDPSSKRRLEPSSPGRSYSPGLGFQAGSRSLP-DAWPSKEISG--RNL 243
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
+ +E ++ P LVT++T+EVV+P++A+ LI S + + +++SGA V
Sbjct: 244 PEYDERATKQGGPKGSGISTAGLVTKTTVEVVIPEHAIAPLIANSGKGVAQIAQISGAKV 303
Query: 638 SLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
+L+E +P G+ K+I+ISGTPEQ AQ +LQ FIL++Q +
Sbjct: 304 NLLEVRP-GSDKVIEISGTPEQTHAAQGLLQAFILNSQSS 342
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 30/193 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+RILC + K G VIG++GSIIKS++ GA I + + +PG +ERII IS E
Sbjct: 23 VFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISAN-----EVL 77
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ SPAQEAL I +I++ G +++ GV + T++++
Sbjct: 78 EDNLSPAQEALLHIQSQIVD-------LGPDKD------GV-----------ITTKLLIP 113
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
GCLLGKGG II +MR +T+ IRILPR+ LP C S+E+VQ+VGDI + A+
Sbjct: 114 SNQTGCLLGKGGAIISEMRKQTRANIRILPRED-LPPCALDSDEMVQIVGDIRAARAALV 172
Query: 260 IISSRLRESQHRD 272
++SRLR HR+
Sbjct: 173 QVTSRLRSFIHRE 185
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 332/702 (47%), Gaps = 114/702 (16%)
Query: 56 NTSINNSNNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
N N R S+ SL V+ +R+LCH + GGVIGK GSII IRQ TG +
Sbjct: 8 NAGPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKL 67
Query: 113 NVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
+ E +PG +ER+I IS + + E + + + GG G++ E
Sbjct: 68 RIEEAVPGCDERVITISGSEKETEEDNTE------------QGKEVNDNDDGGSEGKDRE 115
Query: 173 EYGGGGG------------------VGGGGFRGGGNRVATRMV----------------- 197
E G G G + V RMV
Sbjct: 116 EKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPS 175
Query: 198 -------VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+ VGC+LGKGG +I++M E+ QIRILP+D LP C S S+EIVQ+ G
Sbjct: 176 SFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKD-KLPACASASDEIVQISGS 234
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR--PSMDGA 308
+ V+ A+ +S +L E+ RD + P + PH + + + P G
Sbjct: 235 VEVVRKALQSVSQQLLENPPRDHDSLSAKSTGPSSHS-FGQFPPHNRSFSAQGEPFASGP 293
Query: 309 RFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
+ + + P+ +I P+ E L FR+LCP ++VG +IG+
Sbjct: 294 HDISAFHSAAPLIPKFHEAAIHGRMRPLQ--------EMLTFRLLCPAERVGNIIGKGGA 345
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD- 427
I++ +Q E ++KV + S++ +I IS P+D + P QEA+ +QTRI D
Sbjct: 346 IIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAKPIPDA 405
Query: 428 KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIV 486
KD+I+ R LV S++IGCL G+ GS ++EMR+ +GA+I+IL +++VP C S +E++Q+
Sbjct: 406 KDHIMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVN 465
Query: 487 GEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI-------DIT 539
GEI+A DAL+++TTRL+ + +RD + PS P+ S ++ P ++
Sbjct: 466 GEIEAVHDALLQITTRLKHHCFRDSY-----PSVNYPSNSPF-LDQLPPFPPYLGRRGLS 519
Query: 540 PAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSET-VKQNESERREDVPTVI--NRV 596
P R + P H P +P S+ + + SER+ P I +
Sbjct: 520 PPRMYSDLGHP----HPHAGFPLDDRPP--FLNSIHRPGLPPHISERKPWGPQGILEGGI 573
Query: 597 PL---------------------PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
P+ P++T +T+EVV+P VP + + L + ++S A
Sbjct: 574 PIGLPDFPGGPPRRISGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDA 633
Query: 636 SVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
++++ + +P + I ISGTPEQ AQS++Q F++S +++
Sbjct: 634 NITITDPKPGTVETKIIISGTPEQTHAAQSLIQAFVMSERES 675
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 248/468 (52%), Gaps = 76/468 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGR 139
+RILC K GGVIGK G+II+ R+ TGA I + + + G +ER+I I +D + E
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 140 MPS---------------------------FSPAQEALFLIHDRILESDGGGGFYGEEEE 172
SPAQ+AL + +RIL+ D ++E+
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
G V R++ VGC+LG+GGKI+E++R E+ QIR+LP+DH
Sbjct: 178 L--------------GNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDH 223
Query: 233 SLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFH------GRLHS---P 283
+P C S +E++Q+ G V+ A+ ++SS L+++ D ++ G LH P
Sbjct: 224 -IPACASPGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMP 282
Query: 284 DRF--FPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQ 341
+ FP Y G+ G +Y S Y P +I A + +
Sbjct: 283 GQLDSFPQRGY--------------GSSLHGPDYHSRGYSSMPGPENIGANHRMVLE--- 325
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
E++VF++LC +KVG +IG+ I+ LQ+E G +K+AD SDE+++ IS+ E
Sbjct: 326 ----EEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARE 381
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
+ + PAQ+A++ + RI ++G + + RLLV S +IGCL G+ G +SEMRR+T
Sbjct: 382 NLEQKHSPAQDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRAT 441
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
GA+I+I ++E+VP C S DELVQ++G +Q+ +DAL +T+R+R ++
Sbjct: 442 GASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIF 489
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 48/225 (21%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
++FR+LCP K G VIG+ I+ + + G +++ D V G DE++I I
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 398 -------------------SSEEGP----DDELFPAQEALLHIQTRIVDL---------G 425
+S P DDE PAQ+AL+ + RI+ +
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 426 ADKDNI-ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELV 483
D N+ + RLL PS+++GC+ GR G + E +R+ +GA I++L ++ +PAC S DEL+
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 484 QIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSAL 528
QI G A R AL+ V++ L+ D T ++ PTG L
Sbjct: 236 QITGTFPAVRKALLLVSSCLQDNPRAD----ATNSAAAKPTGGML 276
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P +T +T+EV +P + + ++ + L + ++SGA V + + + ++ ++ +SGTP+
Sbjct: 625 PNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPD 684
Query: 659 QVERAQSVLQGFILSTQ 675
Q AQS++Q FILS Q
Sbjct: 685 QTRAAQSLVQAFILSEQ 701
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-------------HELI----- 118
V R+L + G V+G+ G I++ IRQ +GA I V ELI
Sbjct: 181 VAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQITGT 240
Query: 119 -PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIH--------DRILESDGGGGFYGE 169
P + ++ +S + +P + + A+ ++H D + G +G
Sbjct: 241 FPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSSLHGP 300
Query: 170 EEEEYG-----GGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQ 224
+ G G +G V +++ VG L+GKGG II ++ ET
Sbjct: 301 DYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGAS 360
Query: 225 IRI 227
I+I
Sbjct: 361 IKI 363
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 197/666 (29%), Positives = 328/666 (49%), Gaps = 81/666 (12%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ + ++N ++++ + + P L++ +R+LCH + GGVIGKSG +IK ++Q TG
Sbjct: 25 DTHVGVSNGSSKSKRSKQPPPLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGV 84
Query: 111 WINVHELIPGDEERIIEISDT----------RRRDPEGRMPSFSPAQEALFLIHDRILES 160
I V E +R++ + + + G S AQE L + +RILE
Sbjct: 85 KIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEV 144
Query: 161 DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
+ G V R++ VG ++GKGGK++E++R E
Sbjct: 145 ----------------AAEIEGVEVGAEVGVVYCRLLADVAQVGSVIGKGGKVVEKIRKE 188
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE---SQHRDRSHFH 277
+ +IR+L LP C S+E++++ GD+ +K A+ +S RL++ S+ R
Sbjct: 189 SGCRIRVL--TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSEKRTVRPAE 246
Query: 278 GRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS 337
+H PD HM++ +R S+ S SN ++ SI+A P
Sbjct: 247 AVIH---ETLPD----LHMDHILQRNSVLPILPSSSNIFASGI----HSLSIDADMLPPV 295
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ +D+VF++LC D++G VIG+ IV LQNE G + V V G DE++I+I
Sbjct: 296 DT--NVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI 353
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLG-------ADKDNIITTRLLVPSSEIGCLEGRD 450
++ E + PAQ+A++ + +R VD+ + K + + RL+VPS+++GC+ G+
Sbjct: 354 TASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKG 413
Query: 451 GS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR 509
G +SE+R+ TG NI+I+S ++VP C + +DE+VQI GE +DAL VT RLR L+
Sbjct: 414 GVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFS 473
Query: 510 DFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
S T G V SP + P +H S +T+Q S +
Sbjct: 474 SVLSN----SGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQSSDD 529
Query: 570 AA----------------GSVSETVKQNESERREDVPTVINRVPL------PLVTRSTLE 607
S+S + S+ +P+ + V L +VT +T+E
Sbjct: 530 LGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTTVE 589
Query: 608 VVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+V+PD + + ++ T LTR ++SGA V + E P + ++I ISGTP++ + AQS+L
Sbjct: 590 IVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPDETQAAQSLL 649
Query: 668 QGFILS 673
FIL+
Sbjct: 650 HAFILT 655
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 194/633 (30%), Positives = 324/633 (51%), Gaps = 91/633 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRRDP 136
+R+LCH + GGVIGKSG I+K ++ TGA I V + + R+I + S RR
Sbjct: 53 FRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIAL 112
Query: 137 EGRMPSF--SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+G S AQEA+ + +RILE GV GG V+
Sbjct: 113 QGSSEEVEASAAQEAVLRVFERILEV-------------AAVVDGVPPGGV------VSC 153
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R++ VG ++GKGGK++E++R E+ ++I++L + LP C + ++E+V++ GD+ V
Sbjct: 154 RLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEK-LPTCAASTDEMVEIEGDVLAV 212
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
K A+ +S RL++ + D++ G P P S+ R
Sbjct: 213 KKALVAVSRRLQDCPNVDKTKLIG--GRPLEVVPQQ-------------SLPDPRVDLFQ 257
Query: 315 YRSNNYGPRPSG-YSIEAGAAPMS------DSVQPFYGE-DLVFRMLCPIDKVGRVIGES 366
R + P PS S +G+ P+S ++ P + +++F++LC D+VG VIG+
Sbjct: 258 QRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKG 317
Query: 367 EGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
IV+ LQNE G + V PV DE++ITI++ E P+ PAQ ++ + R ++ G
Sbjct: 318 GTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGI 377
Query: 427 D-------KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSG 478
+ K + ++ RL+VPS+++GCL G+ G+ +SEMR+++GA I+I+ ++VP C S
Sbjct: 378 EKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASE 437
Query: 479 TDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDI 538
D++VQI GE +D L +T RLR L+ PS T A + +++ +I
Sbjct: 438 NDQVVQISGEFVNVQDGLYHITGRLRDNLF---------PSKT--LNGAGIRSSSAMNEI 486
Query: 539 TPAREVQTVTDPPA-ATHQSVQI-PATSQPSKEAAG----SVSETVKQNESERREDVPTV 592
+P V+ DP + H SV + P+ S+ + +S ++ S R TV
Sbjct: 487 SPYGRVR---DPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTV 543
Query: 593 INRVPL--------------PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
P ++T +T+E+V+P+ + + ++ L R ++SGA V+
Sbjct: 544 TGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVT 603
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
L E +P + +I+ ISGTP++ + AQS+LQ FI
Sbjct: 604 LHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 636
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 54/348 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
+ FR+LC ++G VIG+S IV+ LQ++ G ++V D SD ++I +
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEG 448
SSEE E AQEA+L + RI+++ A D + ++ RLL +S++G + G
Sbjct: 111 ALQGSSEE---VEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 449 RDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ G + E +RR +G+ I++L+ E++P C + TDE+V+I G++ A + ALV V+ RL+
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDC- 226
Query: 508 YRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ---SVQIPATS 564
P + P+++ P Q++ DP Q SV P S
Sbjct: 227 ---------------PNVDKTKLIGGRPLEVVPQ---QSLPDPRVDLFQQRGSVLPPIPS 268
Query: 565 QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKT 624
A+GS ++ E D T V +++ + V +I K T
Sbjct: 269 NTISYASGSRPLSI-NTERISTLDPKTSQQEV--------IFKILCSNDRVGGVIGKGGT 319
Query: 625 LLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFIL 672
++ +GAS+S+ E +++I I+ + R G IL
Sbjct: 320 IVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVIL 367
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 331/653 (50%), Gaps = 75/653 (11%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+ + ++N ++++ + + P L++ +R+LCH + GGVIGKSG +IK ++Q TG
Sbjct: 30 DTHVGVSNGSSKSKRSKQPPPLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGV 89
Query: 111 WINVHELIPGDEERIIEISDT----------RRRDPEGRMPSFSPAQEALFLIHDRILES 160
I V E +R++ + + + G S AQE L + +RILE
Sbjct: 90 KIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEV 149
Query: 161 DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
+ G V R++ VG ++GKGGK++E++R E
Sbjct: 150 ----------------AAEIEGVEVGAEVGVVYCRLLADVAQVGSVIGKGGKVVEKIRKE 193
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE---SQHRDRSHFH 277
+ +IR+L LP C S+E++++ GD+ +K A+ +S RL++ S+ R
Sbjct: 194 SGCRIRVL--TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSEKRTVRPAE 251
Query: 278 GRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS 337
+H PD HM++ +R S+ S SN ++ SI+A P
Sbjct: 252 AVIH---ETLPD----LHMDHILQRNSVLPILPSSSNIFASGI----HSLSIDADMLPPV 300
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ +D+VF++LC D++G VIG+ IV LQNE G + V V G DE++I+I
Sbjct: 301 DT--NVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI 358
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLG-------ADKDNIITTRLLVPSSEIGCLEGRD 450
++ E + PAQ+A++ + +R VD+ + K + + RL+VPS+++GC+ G+
Sbjct: 359 TASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKG 418
Query: 451 GSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR 509
G + SE+R+ TG NI+I+S ++VP C + +DE+VQI GE +DAL VT RLR L+
Sbjct: 419 GVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFL 478
Query: 510 DFFQK---ETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQP 566
+ + P + P G++ S + + A+ +D +H + + S P
Sbjct: 479 VPYGRVRDTAPLVRSTPVGTS----HGSFMQHSTAQS----SDDLGLSHS---LDSPSSP 527
Query: 567 SKEAAGSVSETVKQNESERREDVPTVINRVPL------PLVTRSTLEVVLPDYAVPKLIT 620
S+S + S+ +P+ + V L +VT +T+E+V+PD + +
Sbjct: 528 GLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDDVISLVYG 587
Query: 621 KSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
++ T LTR ++SGA V + E P ++I ISGTP++ + AQS+L FIL+
Sbjct: 588 ENGTNLTRLRQISGAKVIVHEPDPITNDRLIVISGTPDETQAAQSLLHAFILT 640
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 325/645 (50%), Gaps = 88/645 (13%)
Query: 56 NTSINNSNNRAN-SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV 114
N++ N+SN N S P + T+R+LCH + G +IGKSG +IK++++ TGA I +
Sbjct: 5 NSNPNHSNGHVNRSRPYTTHV----TFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRI 60
Query: 115 HELIPGDEERIIEISD-TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ P +R+I +S D E S AQ AL + DR+L+ E
Sbjct: 61 EDAPPDSPDRVILVSAPAAASDGE-----VSTAQVALLKVFDRVLD------VAAET--- 106
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G G V+ R++ VG ++GK GK++E++RM+T +IR+L +
Sbjct: 107 ---------AGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKIRMDTGCKIRVL--NEG 155
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV 293
LP C + S+EIV+V G + +VK A+ +S L++ DR+ G H + + V
Sbjct: 156 LPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRTKMTGSRHY-EVVRSETCSV 214
Query: 294 P-------HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGE 346
P H++ +R S S + RSN S E D +
Sbjct: 215 PLESLTNLHIDRRLQRSST----LSTLSNRSNGNASGAPKLSAEVNRVSALDP--KALQQ 268
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS-SEEGPDD 405
++ FR++C D+VG VIG+ IV LQNE G + + +++++TI+ SE+ P+
Sbjct: 269 EVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPES 328
Query: 406 ELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEM 456
PAQ+A++ + ++ V D+G+ K++ +T +L+VPS+++GCL G+ G++ SEM
Sbjct: 329 RYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKGGAIVSEM 388
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
R++TGANI+++ ++VP CVS D+LVQI GE + A+ T RLR L+
Sbjct: 389 RKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLF-------- 440
Query: 517 PPSSTGPTGSALVVEAASPIDITPAREVQTVTD---PPAATHQSV---QIPATSQPSKEA 570
ST +G A R + +V P A S+ +P P A
Sbjct: 441 --VSTQNSGGA--------------RSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVA 484
Query: 571 A--GSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTR 628
V+ V + + ++ + +++ +VT +T+++ +PD + + ++ + L R
Sbjct: 485 GINSRVTNGVSRGLTSQKGGLE-LVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGSNLAR 543
Query: 629 FSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
++SGA V + E +P + + I ISGTP++ AQS+LQ FIL+
Sbjct: 544 LRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFILA 588
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 246/463 (53%), Gaps = 52/463 (11%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS-------- 129
T +R+LC K G VIGK G+II IRQ TG + V E + G +ER++ I+
Sbjct: 44 TVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEA 103
Query: 130 --DTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
+ + D S Q+AL L+ +R+ E GE E GG
Sbjct: 104 DNEQSKEDDSQVEKGISSVQKALLLVFERMAE--------GESETN-------GGDEDSN 148
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
R++V VGCLLGKGG +I+QM E+ QIRILPRD LP C S S+E+VQ+
Sbjct: 149 KSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRD-KLPLCASPSDELVQI 207
Query: 248 VGDINNVKNAVAIISSRLRESQHRD-----------RSHFHGRLHSPDRFFPDDDYVPHM 296
G+++ K A+ IS +L E+ RD SH G P +Y
Sbjct: 208 TGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPA 267
Query: 297 NNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPI 356
P G R ++Y SN P + P Q + L FR+LC
Sbjct: 268 QGA---PYAAGVR--DTDYHSNT----PQLHKFHESGMPGWMKPQ----DILTFRLLCHD 314
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
++VG +IG+ I++ LQNE G ++KV D V S++++I IS PDD + PAQ+A+L
Sbjct: 315 ERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLR 374
Query: 417 IQTRIVDLGAD-KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPA 474
+Q+RIV D K+ + RLLV S++IGCL G+ G+ ++EMR+ +GA+I+IL ++++P
Sbjct: 375 VQSRIVRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPK 434
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
C S +E+VQI GE +A ++AL+++TTRLR + +RD F P
Sbjct: 435 CASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHP 477
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 30/205 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS--------- 398
+VFR+LCP K G VIG+ I+ ++ E GV ++V + V G DE+++ I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 399 SEEGPDDE------LFPAQEALLHIQTRIV---------DLGADKDNIITTRLLVPSSEI 443
+E+ +D+ + Q+ALL + R+ D ++K RLLV SS++
Sbjct: 105 NEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQV 164
Query: 444 GCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
GCL G+ GS + +M +GA I+IL R+++P C S +DELVQI GE+ A + AL ++ +
Sbjct: 165 GCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQ 224
Query: 503 LRSYLYRDFFQKETPPSSTGPTGSA 527
L RD+ ST PTGS+
Sbjct: 225 LLENPPRDYDI-----VSTNPTGSS 244
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
++T +T+EVV+P VP + + L + ++S A +++ E +P ++ +I ISGTPEQ
Sbjct: 594 IITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQ 653
Query: 660 VERAQSVLQGFILS 673
AQS++Q F+LS
Sbjct: 654 THAAQSLIQAFVLS 667
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 321/648 (49%), Gaps = 84/648 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDT 131
+R+LC+ + GGVIGKSGS+IK+++Q TGA I + + +R+I +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
R+ E + S AQEAL + DRILE E E G G
Sbjct: 105 LLRNEE--VVEVSKAQEALLKVFDRILE------VAAEME------------GVDVGDRV 144
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
++ R+V G ++GKGGK++E+++ ET +IR+L D LP C S S+E++++ G +
Sbjct: 145 MSCRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDD--LPLCASASDEMIEIEGRV 202
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP-HMNNTARRPSMDGARF 310
++VK A+ +S RL++ +R G + D +P + A R ++
Sbjct: 203 SSVKKALVAVSQRLQDCPSVNRIKMMGNKPYEIVQYETLDALPREILTAAPRGTLTVVPH 262
Query: 311 SGSNYRSNN-------------YGPRPSGYSIEAGAAPMSDSVQP-FYGEDLVFRMLCPI 356
++ Y R S E S++P +++ FR+LC
Sbjct: 263 ETVDHLLLRSSALSTLSSSSNSYATRVHSLSAEVNRV---SSLEPKALQQEVSFRILCSN 319
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
D+VG VIG+ IV LQ+E G + + V ++++ITI++ E P+ PAQ+A +
Sbjct: 320 DRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRYSPAQKAAVL 379
Query: 417 IQTRIVDLGADKD--------NIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQIL 467
+ +R +++G +K+ + +T RL+VPSS++GCL G+ G + SE+R++TGANI+I+
Sbjct: 380 VFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRII 439
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
++VP C S D++VQI GE + +DAL T RL RD T S+ + S+
Sbjct: 440 GTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRL-----RDNLFVSTQNSAGTRSLSS 494
Query: 528 LVVEAASPI----DITP-AREVQTVTDPPAATHQSVQ---------------IPATSQPS 567
L V+ SP D P ++ T + H Q P +
Sbjct: 495 LRVDT-SPYGIQQDFVPHGSQLPATTSHCLSRHTFAQGIDHLGLSRNLDHPSSPGLWTRN 553
Query: 568 KEAAGSVSETVKQNES--ERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTL 625
+ AG S ++ R+ +++ +VT +T+E+V+PD + + ++
Sbjct: 554 LDLAGINSRSINDFSLGLTSRKGGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGENGRN 613
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
L R ++SGA V + E +P + +II ISGTP++ + AQS+LQ FILS
Sbjct: 614 LVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILS 661
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 186/395 (47%), Gaps = 68/395 (17%)
Query: 58 SINNSNNRANS-NPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
S++ NR +S PK +L ++RILC + + GGVIGK G+I+++++ TGA I++
Sbjct: 291 SLSAEVNRVSSLEPK--ALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGP 348
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
L+ E+R+I I+ + +PE R +SPAQ+A L+ R +E GF E+E
Sbjct: 349 LVAECEDRLITIAAS--ENPESR---YSPAQKAAVLVFSRSIEV----GF----EKELDS 395
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
G G+ V R+VV VGCL+GKGG I+ ++R T IRI+ D +P+
Sbjct: 396 G--------LNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQ-VPK 446
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHG-RLHSPDR-----FFPDD 290
C S ++++VQ+ G+ ++V++A+ + RLR++ + G R S R +
Sbjct: 447 CASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQNSAGTRSLSSLRVDTSPYGIQQ 506
Query: 291 DYVPH-------------------------MNNTARRPSMDGAR-----FSGSNYRS-NN 319
D+VPH ++ PS G +G N RS N+
Sbjct: 507 DFVPHGSQLPATTSHCLSRHTFAQGIDHLGLSRNLDHPSSPGLWTRNLDLAGINSRSIND 566
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+ G + G + + + ++ P D + V GE+ + L+ G
Sbjct: 567 FS---LGLTSRKGGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGENGRNLVRLRQISGA 623
Query: 380 DLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
+ + +P G+ ++II IS G DE AQ L
Sbjct: 624 KVVIHEPRPGTSDRIIVIS---GTPDETQAAQSLL 655
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 204/735 (27%), Positives = 332/735 (45%), Gaps = 149/735 (20%)
Query: 40 RHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGS 99
R R ++ +N S + + R S P V +R+L + ++G+ G
Sbjct: 10 RSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAV---FRVLFPVSRIDSLVGRDGD 66
Query: 100 IIKSIRQHTGAWINVHELIPGDEERII-------------------------------EI 128
+ IR+ TG I V + IPG +ERI +I
Sbjct: 67 GLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDI 126
Query: 129 SDTRRRDPEGRMP---------SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
+ ++++ + P + S ++ALFL+ ++I + EE G
Sbjct: 127 AKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFD-----------EEPEADGTD 175
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
V G R++V VGCLLGKGG +++QM ++ QIRILPRD LP V+
Sbjct: 176 VEGDKL----PTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDK-LPPFVA 230
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ E+VQ+ G I+ VK A+ ++ +L E+ P +D P ++
Sbjct: 231 TNVELVQISGGIDVVKKALELVFQQLIEN-------------------PPNDKDPVASSN 271
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG-------------- 345
A + S + + S PR S ++ G + V F+
Sbjct: 272 AAQSSRSSGQSLSRAHES----PRGSSFNTHGGPYSVPRDVGNFHSSAPSLAPKQYEACI 327
Query: 346 --------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
E L +R+LCP ++VG VIG+ IV+ LQ + G D+KV D S+++II +
Sbjct: 328 PGRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILV 387
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGAD-KDNIITTRLLVPSSEIGCLEGRDGS-LSE 455
+ PDD + P Q+A+ +Q RIV AD K+ + R LV S++IGCL G+ GS ++E
Sbjct: 388 AGPAHPDDRISPVQDAVFRVQARIVKAAADSKEQNLVARFLVSSNQIGCLLGKGGSIIAE 447
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF--- 512
MR+STGA I+IL +E++P C +E+VQI GE + +DA+ ++TTRLR + +RD F
Sbjct: 448 MRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFFRDAFPSV 507
Query: 513 ---------------------QKETPP---SSTGPTGSALVVEAASPIDITPAREVQTVT 548
++ +PP SS GP+ + P +
Sbjct: 508 NSHSNPAFIDRLPSFPSYFGRRELSPPGIYSSLGPSFHKFDALSGIPSLSDLRDDRPPFL 567
Query: 549 DPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERR------EDVPTVINRVPLPLVT 602
P A S + P +SQ E +S+ + RR + P +I T
Sbjct: 568 HRPGAPLLSDRKPWSSQGLVEGGVGLSDFAGAH--HRRIAGFGGGNSPAII--------T 617
Query: 603 RSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVER 662
+T+EVV+P VP + ++ L + ++S A +++ E + + +I ISGTPEQ
Sbjct: 618 STTVEVVVPRNIVPVICGENGECLKQIRQISDAKITITEPKQGDVETMIIISGTPEQTHA 677
Query: 663 AQSVLQGFILSTQDA 677
AQS++Q F++S ++
Sbjct: 678 AQSLIQAFVISETES 692
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 311/657 (47%), Gaps = 78/657 (11%)
Query: 60 NNSNNRANSNPKDPSLMV---TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N+ N R NS M +T YRILC G VIGK G +IKS+RQ T + I V +
Sbjct: 20 NDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVAD 79
Query: 117 LIPGDEERIIEISDT--------RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG 168
+PG +ER+I I + D + PAQ+ L +H I++ G
Sbjct: 80 AVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDA 139
Query: 169 EEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
+++ R++V+ +G L+GKGG I+++R E+ QI+I
Sbjct: 140 DKKRPQD------------------ARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQI- 180
Query: 229 PRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP 288
PR LP C +E+V + GD VK A+ +S+ L + H P P
Sbjct: 181 PRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFK-------------HPPKEQIP 227
Query: 289 DDDYVPHMNNTARRPS------------MDGARFSGSNYRSNNYG-----PRPSGYSIEA 331
+P N ++ PS + F N + G P GY EA
Sbjct: 228 WSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEA 287
Query: 332 GAA-PMSDSVQPFY-----------GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
G+A P+S+ P + E+ R+LCP DK+G VIG+ ++ ++N+ G
Sbjct: 288 GSAWPLSNPALPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGA 347
Query: 380 DLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
++V D SDE++I +S+ E DD + P EA+L +Q + DKD I+TR LVP
Sbjct: 348 SIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGT-TDKDGAISTRFLVP 406
Query: 440 SSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
S IGCL G+ G+ +SEMR+ T ANI+I ++E P CVS +ELVQ+ GE A+DAL++
Sbjct: 407 SKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQ 466
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV 558
+ RLR +++D + S P S+L V +A P+ + + P A
Sbjct: 467 ILKRLRENIFKD-KDGASNTDSVLPL-SSLSVPSAVPLSSSYGTRKYDIVSPRGAIAGRS 524
Query: 559 QIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKL 618
+ + +A +++ R + + L + E +P+ AV +
Sbjct: 525 AAGLSGFGALQAGTGSYASLQPYAPTRTFGIGLSGGHLNSSLAP--SHEFAIPNSAVSSV 582
Query: 619 ITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQ 675
+ + + ++ E+SGA+V L + + ++++ISGTPEQ AQS++Q F+L+ Q
Sbjct: 583 LGRGGSNISHIREISGATVKLRDPITGASDRVVEISGTPEQSHAAQSLIQAFMLTGQ 639
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 244/467 (52%), Gaps = 72/467 (15%)
Query: 61 NSNNRANSNPKDPSLMVT----TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N N+ S+ +D V T YR LC K G VIG+ G I+K +R T + I + E
Sbjct: 21 NGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGE 80
Query: 117 LIPGDEERIIEI--SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEY 174
+PG +ER+I I + E SPAQEALF IHDR++ D Y +E+ E
Sbjct: 81 TVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIHDRVVADD-----YMDEDSE- 134
Query: 175 GGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
GGG++V R++V +GC++GKGG+I++ +R ET Q+RIL DH L
Sbjct: 135 ------------GGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH-L 181
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP 294
PRC S+E+VQ+ G+ VK A+ I+SRL ++ R +
Sbjct: 182 PRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQ--------------------- 220
Query: 295 HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG-----EDLV 349
H+ +A + G SG + + +G + G AP+ V P+ G EDL
Sbjct: 221 HLLASA----IPGVYSSGGSLMAPTHG------APIMGLAPL---VSPYGGYKAPREDLS 267
Query: 350 -----FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
R++CP + +G VIG+ I+ ++ E +KV D+ +I ISS+E +
Sbjct: 268 SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFE 327
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTG 461
D P EA L +Q R + II TTRLLVP+S IGCL G+ G++ +E+RR T
Sbjct: 328 DSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTK 387
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
ANI+ILS+E +P DE+VQI G++ A++ALV + TRLR+ L+
Sbjct: 388 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 434
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 244/467 (52%), Gaps = 72/467 (15%)
Query: 61 NSNNRANSNPKDPSLMVT----TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N N+ S+ +D V T YR LC K G VIG+ G I+K +R T + I + E
Sbjct: 21 NGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGE 80
Query: 117 LIPGDEERIIEI--SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEY 174
+PG +ER+I I + E SPAQEALF IHDR++ D Y +E+ E
Sbjct: 81 TVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIHDRVVADD-----YMDEDSE- 134
Query: 175 GGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
GGG++V R++V +GC++GKGG+I++ +R ET Q+RIL DH L
Sbjct: 135 ------------GGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH-L 181
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP 294
PRC S+E+VQ+ G+ VK A+ I+SRL ++ R +
Sbjct: 182 PRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQ--------------------- 220
Query: 295 HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG-----EDLV 349
H+ +A + G SG + + +G + G AP+ V P+ G EDL
Sbjct: 221 HLLASA----IPGVYSSGGSLMAPTHG------APIMGLAPL---VSPYGGYKAPREDLS 267
Query: 350 -----FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
R++CP + +G VIG+ I+ ++ E +KV D+ +I ISS+E +
Sbjct: 268 SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFE 327
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTG 461
D P EA L +Q R + II TTRLLVP+S IGCL G+ G++ +E+RR T
Sbjct: 328 DSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTK 387
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
ANI+ILS+E +P DE+VQI G++ A++ALV + TRLR+ L+
Sbjct: 388 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 434
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 251/493 (50%), Gaps = 83/493 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII----------- 126
T +R+LC K G VIGK G+II IRQ TG + V E + G +ER++
Sbjct: 44 TVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEA 103
Query: 127 ----------------EISDTRR-----RDPEGRMP--------SFSPAQEALFLIHDRI 157
E+SDT+ D E +P S Q+AL L+ +R+
Sbjct: 104 DNEQSKEDGEDTKAAEEVSDTKEPGENDEDKES-VPVEDSQVEKGISSVQKALLLVFERM 162
Query: 158 LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQM 217
E GE E GG R++V VGCLLGKGG +I+QM
Sbjct: 163 AE--------GESETN-------GGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQM 207
Query: 218 RMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRD----- 272
E+ QIRILPRD LP C S S+E+VQ+ G+++ K A+ IS +L E+ RD
Sbjct: 208 SAESGAQIRILPRD-KLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS 266
Query: 273 ------RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSG 326
SH G P +Y P G R ++Y SN P
Sbjct: 267 TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGA---PYAAGVR--DTDYHSNT----PQL 317
Query: 327 YSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP 386
+ P Q + L FR+LC ++VG +IG+ I++ LQNE G ++KV D
Sbjct: 318 HKFHESGMPGWMKPQ----DILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDG 373
Query: 387 VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-KDNIITTRLLVPSSEIGC 445
V S++++I IS PDD + PAQ+A+L +Q+RIV D K+ + RLLV S++IGC
Sbjct: 374 VPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQIGC 433
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
L G+ G+ ++EMR+ +GA+I+IL ++++P C S +E+VQI GE +A ++AL+++TTRLR
Sbjct: 434 LLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLR 493
Query: 505 SYLYRDFFQKETP 517
+ +RD F P
Sbjct: 494 HHHFRDAFSVNHP 506
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 59/234 (25%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS--------- 398
+VFR+LCP K G VIG+ I+ ++ E GV ++V + V G DE+++ I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 399 --------------------SEEGPDDE---------------LFPAQEALLHIQTRIV- 422
E G +DE + Q+ALL + R+
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 423 --------DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVP 473
D ++K RLLV SS++GCL G+ GS + +M +GA I+IL R+++P
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 474 ACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
C S +DELVQI GE+ A + AL ++ +L RD+ ST PTGS+
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDI-----VSTNPTGSS 273
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
++T +T+EVV+P VP + + L + ++S A +++ E +P ++ +I ISGTPEQ
Sbjct: 623 IITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQ 682
Query: 660 VERAQSVLQGFILS 673
AQS++Q F+LS
Sbjct: 683 THAAQSLIQAFVLS 696
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 251/493 (50%), Gaps = 83/493 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII----------- 126
T +R+LC K G VIGK G+II IRQ TG + V E + G +ER++
Sbjct: 44 TVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEA 103
Query: 127 ----------------EISDTRR-----RDPEGRMP--------SFSPAQEALFLIHDRI 157
E+SDT+ D E +P S Q+AL L+ +R+
Sbjct: 104 DNEQSKEDGEDTKAAEEVSDTKEPGENDEDKES-VPVEDSQVEKGISSVQKALLLVFERM 162
Query: 158 LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQM 217
E GE E GG R++V VGCLLGKGG +I+QM
Sbjct: 163 AE--------GESETN-------GGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQM 207
Query: 218 RMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRD----- 272
E+ QIRILPRD LP C S S+E+VQ+ G+++ K A+ IS +L E+ RD
Sbjct: 208 SAESGAQIRILPRD-KLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS 266
Query: 273 ------RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSG 326
SH G P +Y P G R ++Y SN P
Sbjct: 267 TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGA---PYAAGVR--DTDYHSNT----PQL 317
Query: 327 YSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP 386
+ P Q + L FR+LC ++VG +IG+ I++ LQNE G ++KV D
Sbjct: 318 HKFHESGMPGXMKPQ----DILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDG 373
Query: 387 VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-KDNIITTRLLVPSSEIGC 445
V S++++I IS PDD + PAQ+A+L +Q+RIV D K+ + RLLV S++IGC
Sbjct: 374 VPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQIGC 433
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
L G+ G+ ++EMR+ +GA+I+IL ++++P C S +E+VQI GE +A ++AL+++TTRLR
Sbjct: 434 LLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLR 493
Query: 505 SYLYRDFFQKETP 517
+ +RD F P
Sbjct: 494 HHHFRDAFSVNHP 506
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 59/234 (25%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS--------- 398
+VFR+LCP K G VIG+ I+ ++ E GV ++V + V G DE+++ I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 399 --------------------SEEGPDDE---------------LFPAQEALLHIQTRIV- 422
E G +DE + Q+ALL + R+
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 423 --------DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVP 473
D ++K RLLV SS++GCL G+ GS + +M +GA I+IL R+++P
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 474 ACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
C S +DELVQI GE+ A + AL ++ +L RD+ ST PTGS+
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDY-----DIVSTNPTGSS 273
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 321/639 (50%), Gaps = 89/639 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+R+LCH + G IGKSGS+IKS++Q TGA I + + ER+I + D +
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGD- 78
Query: 139 RMPSFSPAQEALFLIHDRIL-----ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
S +P QEAL + +RIL ESDG G G V+
Sbjct: 79 --VSLNP-QEALLKVFERILDVAAAESDGNGV----------------------GDRVVS 113
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V+ G ++GKGG ++ ++R +T +IR+L + LP C S+EI+++ G ++
Sbjct: 114 CRLLVNAGQAGGVIGKGGMVVAKIRADTGCRIRVL--NDKLPACTKPSDEIIEIQGIASS 171
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPH-------MNNTARRPSMD 306
VK A+ ++ RL++ DR+ G + F + VPH M+ +R S
Sbjct: 172 VKKALVAVAGRLQDCPPLDRTKMMG-TRPYEAFQNETSAVPHEGLTDLNMDFRLQRSSA- 229
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP-FYGEDLVFRMLCPIDKVGRVIGE 365
S S+ RSN + S+E S+ P +++ FR+LC D++G V+G+
Sbjct: 230 ---ISTSSIRSNGVPSKSHPLSVEDNRV---SSLDPEALKQEVTFRILCSGDRIGAVLGK 283
Query: 366 SEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTR----- 420
IV+ LQNE G ++ V PV ++++ITI++ E P+ PAQEA++ + R
Sbjct: 284 GGSIVKALQNETGANISVGPPVVECEDRLITITALENPESRFSPAQEAVVLVFCRSIECC 343
Query: 421 ---IVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACV 476
+VD ++K++ +T +L+VPS+++G L G+ G++ SEMR++T +I+I EVP C
Sbjct: 344 IEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCA 403
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI 536
S D++VQI GE+ RDAL T RLR +++ ++G TG + P+
Sbjct: 404 SFNDQVVQISGELPNVRDALYNATRRLRDHIF-------LIAQNSGGTGPYRRPRDSIPL 456
Query: 537 DITPAREVQTVTDPPA-ATHQSVQIPATSQPSKEAAGS---VSETVKQNESERREDVP-- 590
+ V + P + QS+ S+ S +A S + V S +D
Sbjct: 457 GLGGQSVVGSNHGPSIHSLSQSMDHLTLSRNSGRSASSGVWAPKVVGGKNSRYTDDAGRR 516
Query: 591 ---------------TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
TVI ++T +T+E++LP+ + + ++ + L + ++SGA
Sbjct: 517 LNPREGDLELASGSNTVIGNA--AIITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGA 574
Query: 636 SVSLVEGQPEGTQKI-IQISGTPEQVERAQSVLQGFILS 673
V E +P + + I +SGTP++ + AQS+LQ +IL+
Sbjct: 575 KVVFHEPRPGTSDRAKIVLSGTPDETQAAQSLLQAYILN 613
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 201/451 (44%), Gaps = 77/451 (17%)
Query: 13 DHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPK- 71
D D M T+P Y + + H G + N + + +++I+ S+ R+N P
Sbjct: 185 DCPPLDRTKMMGTRP-YEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSNGVPSK 243
Query: 72 --------------DP-SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
DP +L T+RILC + G V+GK GSI+K+++ TGA I+V
Sbjct: 244 SHPLSVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGP 303
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
+ E+R+I I T +PE R FSPAQEA+ L+ R +E +E
Sbjct: 304 PVVECEDRLITI--TALENPESR---FSPAQEAVVLVFCRSIECCIEKVVDWRSNKE--- 355
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
+ V ++VV VG LLGKGG I+ +MR T T IRI R+ +P+
Sbjct: 356 -------------SSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRI-TRNGEVPK 401
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH--RDRSHFHGRLHSPDRFFP------ 288
C S ++++VQ+ G++ NV++A+ + RLR+ S G P P
Sbjct: 402 CASFNDQVVQISGELPNVRDALYNATRRLRDHIFLIAQNSGGTGPYRRPRDSIPLGLGGQ 461
Query: 289 ---DDDYVPHMNNTARRPSMDG---ARFSGSNYRSNNYGPRPSG-----YSIEAG--AAP 335
++ P +++ ++ SMD +R SG + S + P+ G Y+ +AG P
Sbjct: 462 SVVGSNHGPSIHSLSQ--SMDHLTLSRNSGRSASSGVWAPKVVGGKNSRYTDDAGRRLNP 519
Query: 336 MSDSVQPFYGEDLVF-----------RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
++ G + V ++ P D +G V GE+ ++ L+ G +
Sbjct: 520 REGDLELASGSNTVIGNAAIITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVFH 579
Query: 385 DPVDG-SDEQIITISSEEGPDDELFPAQEAL 414
+P G SD I +S G DE AQ L
Sbjct: 580 EPRPGTSDRAKIVLS---GTPDETQAAQSLL 607
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 149/210 (70%), Gaps = 22/210 (10%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
M+RSRSKRNY+YD QDYDGD+M R+KPRYN NNY H G N
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYN------NNY-HFGGGGGGNNRYRGGGGGGG 52
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ + S+P+ M TTTYRILCHD KAGGVIGKSG+IIKSIRQHTGAWINVHEL+PG
Sbjct: 53 GNGRPSKSHPE---TMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPG 109
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG---EEEEEYGGG 177
D ERIIEISD RRRDP+GRMPSFSPAQEALF +HDRILES+ G+ G EEEE+YGG
Sbjct: 110 DAERIIEISDNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGV 169
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
G RV TR+VVSRMHVGCLL
Sbjct: 170 RPG--------GGRVVTRLVVSRMHVGCLL 191
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE-- 406
+R+LC K G VIG+S I++ ++ G + V + V G E+II IS D +
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGR 128
Query: 407 ---LFPAQEALLHIQTRIVDLGAD-------------------KDNIITTRLLVPSSEIG 444
PAQEAL + RI++ A + TRL+V +G
Sbjct: 129 MPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVG 188
Query: 445 CL 446
CL
Sbjct: 189 CL 190
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 253/492 (51%), Gaps = 64/492 (13%)
Query: 60 NNSNNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N N R N ++ T YR +C K G VIG+ G I+K +R T A I + E
Sbjct: 20 NGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGE 79
Query: 117 LIPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+PG EER++ I SD EG SPAQ+ALF +HDR++ D F+G+++++
Sbjct: 80 TVPGCEERVVTIYSPSD-ETNAVEGGGNYVSPAQDALFKVHDRVVAED----FHGDQDDD 134
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G +V +++V +GC++GKGG I++ +R ET QIRIL DH
Sbjct: 135 G--------------GQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDH- 179
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE----SQHRDRSHF------HGRLHSP 283
LP C S+E+VQ+ GD + VK A+ I+SRL + SQH S G L P
Sbjct: 180 LPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGP 239
Query: 284 DRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPF 343
P P + GA + G + ++ PR S YS AP ++
Sbjct: 240 GAGAPIVGIAP----------LVGA-YGGYKGDTGDWPPR-SMYS-----APRDEAST-- 280
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
++ R++CP +G VIG+ I+ ++ E G +KV DE +I IS++E
Sbjct: 281 --KEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFF 338
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGS-LSEMRRST 460
++ P EA + +Q R + II TTRLLVP+S IGCL G+ GS ++EMRR T
Sbjct: 339 EETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 398
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSS 520
ANI+I+S+E +P S DE+VQI G++ A+DALV V TRLR+ + F +E SS
Sbjct: 399 KANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRA----NLFDREGALSS 454
Query: 521 TGPTGSALVVEA 532
P L V A
Sbjct: 455 FLPVLPYLPVSA 466
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 233/438 (53%), Gaps = 54/438 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 134
T +R LC K G +IG G I K +R T + I + E IPG EER++ I +T
Sbjct: 43 TVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVS 102
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+ G + SPAQ+ALF +HDR+L D E+ E++ ++
Sbjct: 103 EDTGDL--ISPAQDALFRVHDRVLAEDL---RMDEDLEDH---------------QQITV 142
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
RM+V +GC++GKGG++I+ +R ET QIR+L +H LP C S+E++Q+ G+ V
Sbjct: 143 RMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH-LPPCALNSDELLQITGEGAVV 201
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV-PHMNNTARRPSMDGARFSGS 313
K A+ +++RL ++ R + H L SP F +V PH G + G
Sbjct: 202 KKALYQVAARLHDNPSRSQ---HQLLSSPSIFRSGAGFVNPHA----------GTQVMGV 248
Query: 314 NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELL 373
Y S ++ S SV+ F R++CP + VG VIG+ GI++ L
Sbjct: 249 TSLMGPYA------SYKSDGRSKSSSVKEF-----AVRLVCPTENVGAVIGKGGGIIKQL 297
Query: 374 QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DNI 431
+ E G +KV D+ II +S++E +D+ P +A + +Q R + + D I
Sbjct: 298 RQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGDAI 356
Query: 432 ITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+TTRLLVPSS +GCL G+ GS+ +EMR ST A+I++LS+E +P S DE+VQI G+
Sbjct: 357 LTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDAN 416
Query: 491 AARDALVEVTTRLRSYLY 508
A +AL++V RLR+ +
Sbjct: 417 VATNALLQVLMRLRANTF 434
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 250/467 (53%), Gaps = 64/467 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-EISDTRR------ 133
+R+LC+ + GGVIGKSGS+IK+++Q TGA I + + +RII I+D
Sbjct: 47 FRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKILL 106
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG--GNR 191
R+ E + S AQEAL + DRIL S GGG R G+R
Sbjct: 107 RNEE--VIEVSKAQEALLKVFDRILRS---------------------GGGDRSVDVGDR 143
Query: 192 V-ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
V + R+V G ++GKGGK++E+++ ET +IR+L D LP C S S+EI+++ G
Sbjct: 144 VMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRVLTDD--LPLCASASDEIIEIEGR 201
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR-RPSMDGA- 308
+++VK A+ +S RL++ DR+ G + D +P +TA R ++ A
Sbjct: 202 VSSVKKALVAVSQRLQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTLTAAP 261
Query: 309 --RFSGSNYRSNNYGPRPSG-----------YSIEAGAAPMS----DSVQP-FYGEDLVF 350
+ + + ++ S Y+ + P S++P +++ F
Sbjct: 262 RGTLTAVQHETVDHLLLRSSALSTLSSSSNSYATRIHSLPTEVNRVSSLEPKALKQEVTF 321
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+LC D+VG VIG+ IV LQ+E G + + V ++++ITI++ E P+ PA
Sbjct: 322 RILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPESRYSPA 381
Query: 411 QEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTG 461
Q+A + + +R + D G +K +I+T RL+VPSS++GCL G+ G + SEMR++TG
Sbjct: 382 QKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSEMRKATG 441
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
ANI+I+ ++VP C S D++VQI GE + +DAL RLR L+
Sbjct: 442 ANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLF 488
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+VT + +E+V+PD + + ++ + L R ++SGA+V + E +P + +II ISGTP++
Sbjct: 635 IVTNTIVEIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPDE 694
Query: 660 VERAQSVLQGFILS 673
+ AQS+LQ FILS
Sbjct: 695 TQAAQSLLQAFILS 708
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 232/438 (52%), Gaps = 54/438 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 134
T +R LC K G +IG G I K +R T + I + E IPG EER++ I +T
Sbjct: 43 TVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVS 102
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+ G + SPAQ+ALF +HDR+L D E+ E++ ++
Sbjct: 103 EDTGDL--ISPAQDALFRVHDRVLAEDL---RMDEDLEDH---------------QQITV 142
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
RM+V +GC++GKGG++I+ +R ET QIR+L +H LP C S+E++Q+ G+ V
Sbjct: 143 RMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH-LPPCALNSDELLQITGEGAVV 201
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV-PHMNNTARRPSMDGARFSGS 313
K A+ +++RL ++ R + H L SP F V PH G + G
Sbjct: 202 KKALYQVAARLHDNPSRSQ---HQLLSSPSIFRSGAGLVNPHA----------GTQVMGV 248
Query: 314 NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELL 373
Y S ++ S SV+ F R++CP + VG VIG+ GI++ L
Sbjct: 249 TSLMGPYA------SYKSDGRSRSSSVKEF-----AVRLVCPTENVGAVIGKGGGIIKQL 297
Query: 374 QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DNI 431
+ E G +KV D+ II +S++E +D+ P +A + +Q R + + D I
Sbjct: 298 RQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGDAI 356
Query: 432 ITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+TTRLLVPSS +GCL G+ GS+ +EMR ST A+I++LS+E +P S DE+VQI G+
Sbjct: 357 LTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDAN 416
Query: 491 AARDALVEVTTRLRSYLY 508
A +AL++V RLR+ +
Sbjct: 417 VAANALLQVLMRLRANTF 434
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 251/488 (51%), Gaps = 53/488 (10%)
Query: 30 NHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVT---TTYRILCH 86
+H P++ HR + ++ N S R + +D SL++ T +R LC
Sbjct: 4 DHRMSPDHRDSHRKRSRPQSDYDDNGG-----SKRRYRGDDRD-SLVIDRDDTVFRYLCP 57
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPEGRMPSF 143
K G VIG+ G I+K +R T + I + E IPG +ER+I I SD +G
Sbjct: 58 VKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEK-VL 116
Query: 144 SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHV 203
SPAQ+ALF IHDR++ D E+ E G +V +++V +
Sbjct: 117 SPAQDALFRIHDRVVADDA----RSEDSPE--------------GEKQVTAKLLVPSDQI 158
Query: 204 GCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISS 263
GC+LG+GG+I++ +R ET QIRI+ +D ++P C S+E++Q+ G++ VK A+ I+S
Sbjct: 159 GCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIAS 217
Query: 264 RLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPR 323
RL E+ R ++ L S +P + H G R G +YG
Sbjct: 218 RLHENPSRSQN-----LLSSSGGYPAGSLMSHAG---------GPRLVGLAPLMGSYGRD 263
Query: 324 PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
+S P +D + R++ P++ + VIG+ ++ L+ E +KV
Sbjct: 264 AGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKV 319
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSS 441
++ +ITIS+ E +D P EA++ +Q + D ++ TTRLLVPSS
Sbjct: 320 DSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSS 379
Query: 442 EIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVT 500
IGC+ G+ G++ +EMRR T ANI+IL +E +P S DE+VQI GE+ A++AL+++T
Sbjct: 380 RIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQIT 439
Query: 501 TRLRSYLY 508
+RLR+ ++
Sbjct: 440 SRLRANVF 447
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 243/468 (51%), Gaps = 60/468 (12%)
Query: 60 NNSNNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N N R N ++ T YR +C K G VIG+ G I+K +R T A I + E
Sbjct: 20 NGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGE 79
Query: 117 LIPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+PG EER++ I SD EG SPAQ+ALF +HDR++ D F+G+++++
Sbjct: 80 TVPGCEERVVTIYGPSD-ETNAVEGGGNYVSPAQDALFKVHDRVVAED----FHGDQDDD 134
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G +V +++V +GC++GKGG I++ +R ET QIRIL DH
Sbjct: 135 G--------------GQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDH- 179
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE----SQHRDRSHFH------GRLHSP 283
LP C S+E+VQ+ GD VK A+ I+SRL + SQH S G L P
Sbjct: 180 LPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGP 239
Query: 284 DRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPF 343
P P + + + G + ++ PR S YS AP ++
Sbjct: 240 GAGAPIVGIAPLVGS-----------YGGYKGDTGDWPPR-SMYS-----APRDEASS-- 280
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
++ R++CP +G VIG+ I+ ++ + G +KV DE +I IS++E
Sbjct: 281 --KEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFF 338
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGS-LSEMRRST 460
++ P EA + +Q R + II TTRLLVP++ IGCL G+ GS +++MRR T
Sbjct: 339 EETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLT 398
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
ANI+I+S+E +P + DE+VQI G++ A+DALV V TRLR+ L+
Sbjct: 399 KANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRANLF 446
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 15/206 (7%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------S 398
ED V+R +CP K+G VIG IV+ L+ E +++ + V G +E+++TI +
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETN 99
Query: 399 SEEGPDDELFPAQEALLHIQTRIV------DLGADKDNIITTRLLVPSSEIGCLEGRDGS 452
+ EG + + PAQ+AL + R+V D D +T +LLVPS +IGC+ G+ GS
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGS 159
Query: 453 LSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
+ + +R TGA I+IL + +P C +DELVQI G+ + AL ++ +RL R
Sbjct: 160 IVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQ 219
Query: 512 FQKETPPSSTGPTGSALVVE-AASPI 536
+ S P G +L+ A +PI
Sbjct: 220 HLLTSAVSGVYPAGGSLIGPGAGAPI 245
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 267/526 (50%), Gaps = 77/526 (14%)
Query: 45 NNNNTNNIMNNNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSII 101
+ +NT+ + S + R NS D ++ + T YRILC K G V+G+ G I+
Sbjct: 9 HKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR----------MPSFSPAQEALF 151
K++R T A I V + IPG +ER+I I + + E M AQ+AL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 152 LIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKG 210
IHD+I + D G E+ E + V R++V VGCLLGKG
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENV---------------DDVIARILVPGNQVGCLLGKG 173
Query: 211 GKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH 270
G II+Q+R +T IR+LP + +LP+C S+E+VQ+ G + V+ A+ IS+RL +
Sbjct: 174 GSIIQQLRNDTGAGIRVLPSE-NLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPR 232
Query: 271 RDRSHFH-------GRLH-SPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYRSNNY 320
+D R H +P + + +PH+ +++ + P +D R Y
Sbjct: 233 KDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQY----- 287
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
+S EA E+ ++LC + +G+VIG+S G V ++ + G
Sbjct: 288 ------HSAEA--------------EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGAC 327
Query: 381 LKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
++V + + S+E++I +SS+E PDD + P EAL+ + +++ L +++ +TTRL+VP
Sbjct: 328 VQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVP 385
Query: 440 SSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
S+++GC+ G G ++EMRR TGA I++ S+ + P +S +ELVQ+ G AR AL E
Sbjct: 386 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 445
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREV 544
+ +RLR+ RD SS PT A P+DI P RE
Sbjct: 446 IASRLRTRTLRDGS------SSNNPTPFAPF--DGPPVDILPNREF 483
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
++E +P+ + +I L ++SGA V L E P ++ I++I G P+QV+ AQ
Sbjct: 677 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 736
Query: 665 SVLQGFILSTQDA 677
S+LQGFI ++ ++
Sbjct: 737 SLLQGFIGASSNS 749
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 267/526 (50%), Gaps = 77/526 (14%)
Query: 45 NNNNTNNIMNNNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSII 101
+ +NT+ + S + R NS D ++ + T YRILC K G V+G+ G I+
Sbjct: 16 HKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 75
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR----------MPSFSPAQEALF 151
K++R T A I V + IPG +ER+I I + + E M AQ+AL
Sbjct: 76 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 135
Query: 152 LIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKG 210
IHD+I + D G E+ E + V R++V VGCLLGKG
Sbjct: 136 KIHDKIAADEDLHAGIVHEKSENV---------------DDVIARILVPGNQVGCLLGKG 180
Query: 211 GKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH 270
G II+Q+R +T IR+LP + +LP+C S+E+VQ+ G + V+ A+ IS+RL +
Sbjct: 181 GSIIQQLRNDTGAGIRVLPSE-NLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPR 239
Query: 271 RDRSHFH-------GRLH-SPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYRSNNY 320
+D R H +P + + +PH+ +++ + P +D R Y
Sbjct: 240 KDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQY----- 294
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
+S EA E+ ++LC + +G+VIG+S G V ++ + G
Sbjct: 295 ------HSAEA--------------EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGAC 334
Query: 381 LKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
++V + + S+E++I +SS+E PDD + P EAL+ + +++ L +++ +TTRL+VP
Sbjct: 335 VQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVP 392
Query: 440 SSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
S+++GC+ G G ++EMRR TGA I++ S+ + P +S +ELVQ+ G AR AL E
Sbjct: 393 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 452
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREV 544
+ +RLR+ RD SS PT A P+DI P RE
Sbjct: 453 IASRLRTRTLRDGS------SSNNPTPFAPF--DGPPVDILPNREF 490
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
++E +P+ + +I L ++SGA V L E P ++ I++I G P+QV+ AQ
Sbjct: 684 SVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQ 743
Query: 665 SVLQGFILSTQDA 677
S+LQGFI ++ ++
Sbjct: 744 SLLQGFIGASSNS 756
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 244/441 (55%), Gaps = 47/441 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 134
T +R LC K G +IG+ G I+K +R T A I + E +PG +ER++ + +T
Sbjct: 47 TVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTV 106
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
D ++ SPA++ALF IHDR++ D + ++EEE GG +V
Sbjct: 107 DDGDKL--VSPAEDALFKIHDRVVAED----LHSDQEEE--------------GGPQVNA 146
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+++V +GC+LGKGG+I++ +R ET QIRIL DH +P C S+E+VQ+ GD V
Sbjct: 147 KLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACALRSDELVQISGDAAVV 205
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG-- 312
K A+ I+SRL + R + + S +P + M TA P + A G
Sbjct: 206 KKALHQIASRLHHNPSRTQHLLGSAVPS---VYPSGGSL--MGPTAGPPIVGMAPLVGPY 260
Query: 313 SNYRSN--NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
Y+S+ ++ PR S YS AP + ++ R++CP +G VIG+ GI+
Sbjct: 261 GGYKSDTGDWPPR-SMYS-----APRDEISS---SKEFSVRLVCPTGNLGGVIGKGGGII 311
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
++ + G +KV G D+ +ITIS++E ++ P EA + +Q R +
Sbjct: 312 NQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSG 370
Query: 431 II--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
II TTRLLV SS IGCL G+ GS+ +EMRR T +NI+ILS+E +P S DE+VQI G
Sbjct: 371 IISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISG 430
Query: 488 EIQAARDALVEVTTRLRSYLY 508
++ A+DALV+V TRLR+ L+
Sbjct: 431 DLDVAKDALVQVLTRLRANLF 451
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 244/441 (55%), Gaps = 47/441 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 134
T +R LC K G +IG+ G I+K +R T A I + E +PG +ER++ + +T
Sbjct: 47 TVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTV 106
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
D ++ SPA++ALF IHDR++ D + ++EEE GG +V
Sbjct: 107 DDGDKL--VSPAEDALFKIHDRVVAED----LHSDQEEE--------------GGPQVNA 146
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+++V +GC+LGKGG+I++ +R ET QIRIL DH +P C S+E+VQ+ GD V
Sbjct: 147 KLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDH-VPACALRSDELVQISGDAAVV 205
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG-- 312
K A+ I+SRL + R + + S +P + M TA P + A G
Sbjct: 206 KKALHQIASRLHHNPSRTQHLLGSAVPS---VYPSGGSL--MGPTAGPPIVGMAPLVGPY 260
Query: 313 SNYRSN--NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
Y+S+ ++ PR S YS AP + ++ R++CP +G VIG+ GI+
Sbjct: 261 GGYKSDTGDWPPR-SMYS-----APRDEISS---SKEFSVRLVCPTGNLGGVIGKGGGII 311
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
++ + G +KV G D+ +ITIS++E ++ P EA + +Q R +
Sbjct: 312 NQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSG 370
Query: 431 II--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
II TTRLLV SS IGCL G+ GS+ +EMRR T +NI+ILS+E +P S DE+VQI G
Sbjct: 371 IISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISG 430
Query: 488 EIQAARDALVEVTTRLRSYLY 508
++ A+DALV+V TRLR+ L+
Sbjct: 431 DLDVAKDALVQVLTRLRANLF 451
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 267/526 (50%), Gaps = 77/526 (14%)
Query: 45 NNNNTNNIMNNNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSII 101
+ +NT+ + S + R NS D ++ + T YRILC K G V+G+ G I+
Sbjct: 9 HKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR----------MPSFSPAQEALF 151
K++R T A I V + IPG +ER+I I + + E M AQ+AL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 152 LIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKG 210
IHD+I + D G E+ E + V R++V VGCLLGKG
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENV---------------DDVIARILVPGNQVGCLLGKG 173
Query: 211 GKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH 270
G II+Q+R +T IR+LP + +LP+C S+E+VQ+ G + V+ A+ IS+RL +
Sbjct: 174 GSIIQQLRNDTGAGIRVLPSE-NLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPR 232
Query: 271 RDRSHFH-------GRLH-SPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYRSNNY 320
+D R H +P + + +PH+ +++ + P +D R Y
Sbjct: 233 KDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQY----- 287
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
+S EA E+ ++LC + +G+VIG+S G V ++ + G
Sbjct: 288 ------HSAEA--------------EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGAC 327
Query: 381 LKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
++V + + S+E++I +SS+E PDD + P EAL+ + +++ L +++ +TTRL+VP
Sbjct: 328 VQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLA--ENHHLTTRLVVP 385
Query: 440 SSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
S+++GC+ G G ++EMRR TGA I++ S+ + P +S +ELVQ+ G AR AL E
Sbjct: 386 SNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTE 445
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREV 544
+ +RLR+ RD SS PT A P+DI P RE
Sbjct: 446 IASRLRTRTLRDGS------SSNNPTPFAPF--DGPPVDILPNREF 483
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 235/452 (51%), Gaps = 46/452 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 135
T +R LC K G VIG+ G I+K +R T + I + E IPG +ER+I I SD
Sbjct: 44 TVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAF 103
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+G SPAQ+ALF IHDR++ D E+ E G +V +
Sbjct: 104 GDGEK-VLSPAQDALFRIHDRVVADDA----QSEDSSE--------------GEQQVTAK 144
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V +GC+LG+GG+I++ +R ET QIRI+ +D ++P C S+E++Q+ G++ VK
Sbjct: 145 LLVPSDQIGCILGRGGQIVQNIRSETGAQIRII-KDRNMPLCALNSDELIQISGEVLIVK 203
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A+ I+SRL E+ R ++ + +P + H G R G
Sbjct: 204 KALHQIASRLHENPSRSQNLLSSAISG---GYPSGSLMSHAG---------GPRLVGIAP 251
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
+YG +S P +D + R++ P++ + VIG+ ++ L+
Sbjct: 252 LMGSYGRDGGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQ 307
Query: 376 EIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII--T 433
E +KV ++ +ITIS+ E +D P EA++ +Q + + ++ T
Sbjct: 308 ETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVERDSGLVSFT 367
Query: 434 TRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA 492
TRLLVPSS IGC+ G+ G++ +EMRR T ANI+IL +E +P S DE+VQI GE+ A
Sbjct: 368 TRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVA 427
Query: 493 RDALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
++AL+++T+RLR+ + F +E S+ P
Sbjct: 428 KEALIQITSRLRA----NVFDREGAVSALMPV 455
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 21/207 (10%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D VFR LCP+ K+G VIG IV+ L+ + +++ + + G DE++ITI S P D
Sbjct: 42 DDTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYS---PSD 98
Query: 406 E----------LFPAQEALLHIQTRIVDLGADKDNI------ITTRLLVPSSEIGCLEGR 449
E L PAQ+AL I R+V A ++ +T +LLVPS +IGC+ GR
Sbjct: 99 ETNAFGDGEKVLSPAQDALFRIHDRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGR 158
Query: 450 DGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G + + +R TGA I+I+ +P C +DEL+QI GE+ + AL ++ +RL
Sbjct: 159 GGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHENPS 218
Query: 509 RDFFQKETPPSSTGPTGSALVVEAASP 535
R + S P+GS L+ A P
Sbjct: 219 RSQNLLSSAISGGYPSGS-LMSHAGGP 244
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 263/514 (51%), Gaps = 49/514 (9%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+++ VGC+LGKGG +I++M E+ QIRILP+D +P C S +EIVQ+ G + V
Sbjct: 182 RLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKD-KVPVCASAFDEIVQISGSVEVV 240
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR--PSMDGARFSG 312
+ A+ +S +L E+ RD + P + PH ++ A + P G
Sbjct: 241 RKALQSVSQQLLENPPRDHESLSAKSTGPSSHS-FGQFPPHNHSFAAQGEPFATGPHDIS 299
Query: 313 SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
+ + + P+ +I P+ E L FR+LCP+++VG +IG+ I++
Sbjct: 300 AFHSAPPLIPKFHEAAIHGRTRPLQ--------EMLTFRLLCPVERVGNIIGKGGAIIKT 351
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-KDNI 431
+Q E ++KV + S++ +I IS P+D + P QEA+ +QTRI D D+
Sbjct: 352 VQQETVSEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIPDANDHT 411
Query: 432 ITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ R LV S++IGCL G+ GS+ +EMR+ +GA+I+IL +++VP C S +E++Q+ GEI+
Sbjct: 412 MLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIE 471
Query: 491 AARDALVEVTTRLRSYLYRDF-----------FQKETPP----------------SSTGP 523
A +AL+++TTRL+ + +RD F + PP S GP
Sbjct: 472 AVHEALLQITTRLKHHFFRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPGMYSDLGP 531
Query: 524 TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNES 583
S A P+D PA + + P H S + P E +
Sbjct: 532 PPS----HAGFPLDDRPAF-LNNIHRPGLPPHISQRKPWGPLGVLEGGTPIGLPDFPRGP 586
Query: 584 ERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ 643
RR + P++T +T+EVV+P VP + + L + ++S A++++ + +
Sbjct: 587 PRRI---SGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITITDPK 643
Query: 644 PEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
P + I ISGTPEQ AQS++Q F++S +++
Sbjct: 644 PGAVETKIIISGTPEQTHAAQSLIQAFVMSERES 677
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 32/267 (11%)
Query: 9 NYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGN---NNNNTNNIMNNNTSINNSNNR 65
N DH+ + G + + + N+++ +G + + ++ + +
Sbjct: 254 NPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQGEPFATGPHDISAFHSAPPLIPKFHE 313
Query: 66 ANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI 125
A + + L T+R+LC + G +IGK G+IIK+++Q T + I V E P E+ +
Sbjct: 314 AAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCV 373
Query: 126 IEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF 185
I IS PE R+ SP QEA+F + RI +
Sbjct: 374 IVISGPAH--PEDRV---SPVQEAVFRVQTRIAKPIP----------------------- 405
Query: 186 RGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIV 245
+ + R +VS +GCLLGKGG II +MR ++ IRIL +D +P+C S EE++
Sbjct: 406 DANDHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKD-KVPKCASEDEEVI 464
Query: 246 QVVGDINNVKNAVAIISSRLRESQHRD 272
QV G+I V A+ I++RL+ RD
Sbjct: 465 QVNGEIEAVHEALLQITTRLKHHFFRD 491
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 64/243 (26%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV----------DGSDEQIITI 397
+VFR+LC ++G VIG+ I+ ++ E GV +K+ + V GSD++
Sbjct: 34 VVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEEY 93
Query: 398 SSE-------------EGPDDE-----------------LFPAQE------------ALL 415
++E EG D E P ++ A+
Sbjct: 94 TAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKEEKDAVPVEDSKSEKGNSAIWKAIS 153
Query: 416 HIQTRIV---------DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQ 465
+ R+V D ++K + RLL+ ++++GC+ G+ GS + M +GA I+
Sbjct: 154 LVFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIR 213
Query: 466 ILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTG 525
IL +++VP C S DE+VQI G ++ R AL V+ +L RD + STGP+
Sbjct: 214 ILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQQLLENPPRD--HESLSAKSTGPSS 271
Query: 526 SAL 528
+
Sbjct: 272 HSF 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
+ +R+LCH + G VIGK GSII IR TG + + E +PG +ER+I IS + + E
Sbjct: 33 SVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEE 92
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 261/483 (54%), Gaps = 53/483 (10%)
Query: 37 NNYRHRGNNNNNTNNIMNNNTSINNSNNRAN-SNPKDPSLMV--TTTYRILCHDMKAGGV 93
N+Y R ++ ++ + N N R N + +DP + T YR LC K G +
Sbjct: 6 NSYGKRAHSQSDYGD--------NGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSI 57
Query: 94 IGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGRMPSF-SPAQEALF 151
IG+ G I+K +R T + I + E +PG EER++ I S + + +F SPAQ+ALF
Sbjct: 58 IGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALF 117
Query: 152 LIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGG 211
+HDR++ + +GE+ EE ++V R++V +GC++GKGG
Sbjct: 118 RVHDRVVSEE----VHGEDSEE---------------ASQVTVRLLVPSDQIGCVIGKGG 158
Query: 212 KIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHR 271
+II+ +R E+ Q+RIL DH LP C S+E+VQ+ G+ + V+ A+ I+SRL ++ R
Sbjct: 159 QIIQSIRSESGAQVRILKDDH-LPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSR 217
Query: 272 DRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS--NYRSNNYGPRPSGYSI 329
+ + P + M T+ P M A G+ YR ++ S YS
Sbjct: 218 SQHLLASAV--PTGYSSGGSL---MGPTSGAPIMGLAPLVGTYGGYRGDSGDWSRSLYS- 271
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-ADPVD 388
AP ++ ++ R++CPI +G VIG+ I+ ++ E G +KV +
Sbjct: 272 ----APRDEASS----KEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAA 323
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCL 446
+D+ +I IS++E +D P EA + +Q R + I+ TTRLLVP+S IGCL
Sbjct: 324 EADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCL 383
Query: 447 EGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
G+ G++ +EMR+ T ANI+ILS+E +P S DE+VQI G++ A+DAL++VTTRLR+
Sbjct: 384 IGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRA 443
Query: 506 YLY 508
L+
Sbjct: 444 NLF 446
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 233/451 (51%), Gaps = 70/451 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
T YR LC K G +IG+ G I K +R T + I + E +PG EER++ I S + +P
Sbjct: 109 TVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPF 168
Query: 138 GRMPSF-SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
G SPAQ+ALF +HDRI+ G +EE E +V RM
Sbjct: 169 GDTGELVSPAQDALFRVHDRIV----AGELPADEEPEEA--------------QQVTVRM 210
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V +GC++GKGG++I+ +R ET+ QIRIL +D LP C S+E++Q++GD + V+
Sbjct: 211 LVPSDQIGCVIGKGGQVIQNIRSETRAQIRIL-KDEHLPPCALSSDELLQIIGDASVVRK 269
Query: 257 AVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYR 316
A+ ++SRL E+ R + H L S + H +ARR FS
Sbjct: 270 ALHQLASRLHENPSRSQ---HLLLSSSPNMYQSGGDWSHSYYSARRDESSAKEFS----- 321
Query: 317 SNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
R++CP +G VIG+ GI++ ++ E
Sbjct: 322 ---------------------------------LRLVCPTGNIGGVIGKGGGIIKQIRQE 348
Query: 377 IGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG--ADKDNIITT 434
G +KV D+ II IS++E +D P +A L +Q R + D+++TT
Sbjct: 349 SGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSVVTT 407
Query: 435 RLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
RLLVPSS IGCL G+ G+ +SEMR T ANI+ILS+E +P S DE+VQI GE+ A
Sbjct: 408 RLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVAS 467
Query: 494 DALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
+AL++VT RL++ + F++E ++ PT
Sbjct: 468 NALLQVTLRLKA----NLFEREGAIAAIPPT 494
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 318 NNYGPRP---SGYSIEAGAA---PMSDSVQPFYG-EDLVFRMLCPIDKVGRVIGESEGIV 370
N+YG R S Y G+ P D Q G ED V+R LCP+ K+G +IG I
Sbjct: 72 NDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIA 131
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITI--SSEE----GPDDELF-PAQEALLHIQTRIV- 422
+ L++E ++++ + + G +E+++TI SSEE G EL PAQ+AL + RIV
Sbjct: 132 KQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVHDRIVA 191
Query: 423 -DLGADKD----NIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
+L AD++ +T R+LVPS +IGC+ G+ G + +R T A I+IL E +P C
Sbjct: 192 GELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCA 251
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRL 503
+DEL+QI+G+ R AL ++ +RL
Sbjct: 252 LSSDELLQIIGDASVVRKALHQLASRL 278
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 263/501 (52%), Gaps = 83/501 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS----------- 129
+RILC K GG+IGK G+II IRQ TGA + V E +PG +ER++ I+
Sbjct: 38 FRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEVNN 97
Query: 130 -DTRRRDPEGRMPSF---------------------------------SPAQEALFLIHD 155
+ R D + + P+ S Q+AL L+ +
Sbjct: 98 AEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLVFE 157
Query: 156 RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIE 215
R+LE++ EE+++ + R++V VGCLLGKGG +I+
Sbjct: 158 RMLEAEPEMDEGNEEKKKP---------------SMSTLRLLVLSSQVGCLLGKGGSVIK 202
Query: 216 QMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSH 275
QM E+ QIRILPRD LP C S ++E+VQ+ G+++ ++ A+ ++ +L E+ +D
Sbjct: 203 QMSAESGAQIRILPRD-KLPICASPTDELVQIAGEVDAIRKALQSVAQQLLENPPKDPEA 261
Query: 276 FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP 335
+ P P H RP + N R YG P + E G
Sbjct: 262 Y-----PPISTGPSSHSFGH---PLPRPEAYPPPYHSFNARGTTYGAGPREFH-EGG--- 309
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
M ++P + L FR+LC +KVG VIG+ I++ LQ E G ++KV + V S+++II
Sbjct: 310 MPGRMRP-APDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRII 368
Query: 396 TISSEEGPDDELFPAQEALLHIQTRI---VDLGADKDNIITTRLLVPSSEIGCLEGRDGS 452
IS PDD + AQ+A+L +QTRI + L K+ + RLLV S++IGCL G+ G+
Sbjct: 369 LISGPAHPDDRISAAQDAVLRVQTRIARALPLPEGKEKAVIGRLLVSSNQIGCLLGKGGA 428
Query: 453 -LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
++EMR+STGA I+IL ++++P C S +E+VQI GE + ++AL+++TTRLR++ +RD
Sbjct: 429 IMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITTRLRNHFFRDV 488
Query: 512 FQKETPPSSTGPTGSALVVEA 532
F PS P+ A + +A
Sbjct: 489 F-----PSIDHPSNPAFLDQA 504
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 129/282 (45%), Gaps = 73/282 (25%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+R+LC D K GGVIGK G+IIK+++Q TG I V E + E+RII IS P+ R
Sbjct: 322 TFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAH--PDDR 379
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S AQ+A+ + RI + E +E V R++VS
Sbjct: 380 I---SAAQDAVLRVQTRIARA-----LPLPEGKEKA----------------VIGRLLVS 415
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+GCLLGKGG I+ +MR T IRIL +D +P+C S +EE+VQ+ G+ V+ A+
Sbjct: 416 SNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQ-IPKCASENEEVVQINGEHEVVQEALL 474
Query: 260 IISSRLRESQHRD-----------------------------RSHFHGRLHSPD------ 284
I++RLR RD FH HS D
Sbjct: 475 QITTRLRNHFFRDVFPSIDHPSNPAFLDQAPPFPPYMGRRELSPPFHA-FHSFDGMGGPP 533
Query: 285 ---RFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPR 323
F P DD+ P M+N RP M ++ +GP+
Sbjct: 534 PPVGFHPHDDHSPFMHNI-HRPGMP------PHFERKPWGPQ 568
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 624 TLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
L + ++S A +++ E +P + +I ISGTPEQ AQS++Q F++S +++
Sbjct: 625 ACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVMSERES 678
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 259/535 (48%), Gaps = 85/535 (15%)
Query: 40 RHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGS 99
RH + + + +++ + N+R + P S + T YRILC K G V+G+ G
Sbjct: 8 RHNPSTSRKRTHFNSDDGNRKRLNSRHDDGPMS-SQPIETVYRILCPGKKIGSVLGRGGH 66
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR--------------DPEGRMPSFSP 145
I+K++R+ T A I V + IPG EER+I I D + + D M
Sbjct: 67 IVKALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCF 126
Query: 146 AQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVG 204
AQ+AL IHD+I D G E+ E V R++V VG
Sbjct: 127 AQDALLKIHDKISTHEDPHDGAIHEKSETAAD---------------VTARILVPGNQVG 171
Query: 205 CLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSR 264
CLLGKGG II+Q+R +T IRILP LP+C S+E+VQ+ G + V+ A+ IS+R
Sbjct: 172 CLLGKGGSIIQQLRNDTGAGIRILP-SQDLPQCALQSDELVQISGAPSLVRKALYEISTR 230
Query: 265 LRESQHRDRSHF--------HGRLHSPDRFFPDDDYVP--HMNNTARRPSMDGARFSGSN 314
L + ++ + SP ++ +P H++ P +D
Sbjct: 231 LHQHPRKENPPLEEIIDASTQRKRESPPPLPHENLMLPYQHVDRLPPMPLLD-------P 283
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
YRS RPS Y + E+ R+LC + +G VIG+S V ++
Sbjct: 284 YRS-----RPSQYPVPE-------------AEEFSVRILCASELIGPVIGKSGANVRQVE 325
Query: 375 NEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+ G + V + D S E++I +SS+E P D + PA EAL+ + ++ V ++K ++I
Sbjct: 326 QQTGARILVQELDKDASGERLIVLSSKEIPGDPVSPAIEALILLHSK-VSASSEKRHLI- 383
Query: 434 TRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA 492
TRL+VPSS++GC+ G G ++EMRR GA I++ S+ + P +S +ELVQ+ G A
Sbjct: 384 TRLVVPSSKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIA 443
Query: 493 RDALVEVTTRLRSYLYRDFFQKETP---PSSTGPTGSALVVEAASPIDITPAREV 544
RDAL E+ +RLR+ RD P S GP G DI P+RE
Sbjct: 444 RDALTEIASRLRTRTLRDGGSGNNPLPLAPSDGPRG-----------DIFPSREF 487
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
S+LE+++P+ ++ ++ L ++SGA + L+EG P ++ I++I G P+QV A
Sbjct: 687 SSLELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEGHPGSSESIMEIQGMPDQVRAA 746
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 747 QSLLQGFI 754
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 233/451 (51%), Gaps = 70/451 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
T YR LC K G +IG+ G I K +R T + I + E +PG EER++ I S + +P
Sbjct: 43 TVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPF 102
Query: 138 GRMPSF-SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
G SPAQ+ALF +HDRI+ G +EE E +V RM
Sbjct: 103 GDTGELVSPAQDALFRVHDRIV----AGELPADEEPEEA--------------QQVTVRM 144
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V +GC++GKGG++I+ +R ET+ QIRIL +D LP C S+E++Q++GD + V+
Sbjct: 145 LVPSDQIGCVIGKGGQVIQNIRSETRAQIRIL-KDEHLPPCALSSDELLQIIGDASVVRK 203
Query: 257 AVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYR 316
A+ ++SRL E+ R + H L S + H +ARR FS
Sbjct: 204 ALHQLASRLHENPSRSQ---HLLLSSSPNMYQSGGDWSHSYYSARRDESSAKEFS----- 255
Query: 317 SNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
R++CP +G VIG+ GI++ ++ E
Sbjct: 256 ---------------------------------LRLVCPTGNIGGVIGKGGGIIKQIRQE 282
Query: 377 IGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG--ADKDNIITT 434
G +KV D+ II IS++E +D P +A L +Q R + D+++TT
Sbjct: 283 SGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSVVTT 341
Query: 435 RLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
RLLVPSS IGCL G+ G+ +SEMR T ANI+ILS+E +P S DE+VQI GE+ A
Sbjct: 342 RLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVAS 401
Query: 494 DALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
+AL++VT RL++ L F++E ++ PT
Sbjct: 402 NALLQVTLRLKANL----FEREGAIAAIPPT 428
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 318 NNYGPRP---SGYSIEAGAA---PMSDSVQPFYG-EDLVFRMLCPIDKVGRVIGESEGIV 370
N+YG R S Y G+ P D Q G ED V+R LCP+ K+G +IG I
Sbjct: 6 NDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIA 65
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITI--SSEE----GPDDELF-PAQEALLHIQTRIV- 422
+ L++E ++++ + + G +E+++TI SSEE G EL PAQ+AL + RIV
Sbjct: 66 KQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVHDRIVA 125
Query: 423 -DLGADKD----NIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
+L AD++ +T R+LVPS +IGC+ G+ G + +R T A I+IL E +P C
Sbjct: 126 GELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCA 185
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRL 503
+DEL+QI+G+ R AL ++ +RL
Sbjct: 186 LSSDELLQIIGDASVVRKALHQLASRL 212
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/583 (28%), Positives = 278/583 (47%), Gaps = 107/583 (18%)
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
++ + +PE +P A +A+ L+ DRI ++G E G
Sbjct: 188 VAKVTKLEPERVIPL---ALKAVSLVFDRIFATEG--------NNETGNASAASA----- 231
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
V+ RM+V G LLGKGG +++QM + +IR+L +LP C +++++ Q+
Sbjct: 232 ---PVSLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVL--KDNLPSCALLNDKLCQI 286
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G+I++V+ + +S L H P + D V ++++
Sbjct: 287 TGEIDSVRKGLNAVSEVLLA-------------HPPK----ETDAVADVHSSGSSSRSLF 329
Query: 308 ARFSG--SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG------EDLVFRMLCPIDKV 359
++ G S +SN + P S G + D P +G E L FRMLCP DKV
Sbjct: 330 SQPDGLPSGMQSNFHIPLQGPPSQANGPFDIVDLQPPIHGHASVAIESLSFRMLCPQDKV 389
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQT 419
G +IG+ IV+ +QN+ G ++KV D V +D++II+IS P D + PAQ A+LH+Q
Sbjct: 390 GSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDGISPAQNAILHVQR 449
Query: 420 RIVDLGAD-KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVS 477
+I+ +D K+ T RL+V +++GC+ G+ GS ++EMR+ +GA I +LS++++P V
Sbjct: 450 KIMLPSSDKKEGPATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFIVVLSKDKIPRGVP 509
Query: 478 GTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP--------------PSSTGP 523
DE++QI G +A ++AL++VT RLR++L+RD P P S
Sbjct: 510 EHDEVIQINGSCEAIQEALMQVTARLRNHLFRDRMPAVGPNMRPPFGLLDPQFGPFSGNH 569
Query: 524 TGSALVVE---------AASPIDITPAREVQ---TVTDPPAATHQSV-QIPATSQPSKEA 570
S+L + A+P + R++ +++D P A H+ P QPS
Sbjct: 570 ESSSLFHKDFMGRPLDGIAAPWTVKGMRDLSDPVSISDIPGAGHREAGGFPGPGQPS--- 626
Query: 571 AGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFS 630
++ T EV++P +P L + L R
Sbjct: 627 -----------------------------MMPNLTAEVLVPRLVIPVLCGEDGGCLDRIR 657
Query: 631 EMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
E S A +++ E + + ISGTPEQ+ A+S+++ F++S
Sbjct: 658 EFSEAKITVAEPTADAMDTAVLISGTPEQMHAARSLVEAFVMS 700
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 52/339 (15%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
+ ++R+LC K G +IGK G+I+K+I+ TG I V + +P ++RII IS P
Sbjct: 377 SLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISIS-----GPA 431
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
SPAQ A+ + +I+ +++E R++
Sbjct: 432 HPSDGISPAQNAILHVQRKIM-------LPSSDKKE----------------GPATCRLI 468
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
VS VGC+LGKGG II +MR + I +L +D +PR V +E++Q+ G ++ A
Sbjct: 469 VSGNQVGCVLGKGGSIIAEMRKLSGAFIVVLSKD-KIPRGVPEHDEVIQINGSCEAIQEA 527
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP----HMNNTARRPSMDGARFSGS 313
+ +++RLR RDR G P D + P H +++ G G
Sbjct: 528 LMQVTARLRNHLFRDRMPAVGPNMRPPFGLLDPQFGPFSGNHESSSLFHKDFMGRPLDGI 587
Query: 314 NYRSNNYGPR-----------PSGYSIEAGA--APMSDSVQP-FYGEDLVFRMLCPIDKV 359
G R P EAG P S+ P E LV R++ P+
Sbjct: 588 AAPWTVKGMRDLSDPVSISDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPV--- 644
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ GE G ++ ++ + VA+P + + + IS
Sbjct: 645 --LCGEDGGCLDRIREFSEAKITVAEPTADAMDTAVLIS 681
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+RILC K+G VIGK G+II IRQ T I V PG +ER+I I+ + + G
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDEEAG 104
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
G ++ + P S + IE G +FR+LCP K G VIG+ I+
Sbjct: 23 GKWQKTKHPSPHKSQFKIEPGVP--------------IFRILCPASKSGNVIGKGGAIIA 68
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISS 399
++ E + ++V G DE++I I++
Sbjct: 69 KIRQETRMRIRVDRAAPGCDERVIFITA 96
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 253/559 (45%), Gaps = 87/559 (15%)
Query: 162 GGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMET 221
GG GEEE E G V RM+ + VGC+LGKGGK +E+MR E+
Sbjct: 94 GGDEAAGEEEREVPG--------------VVGCRMLAASGQVGCVLGKGGKTVERMRQES 139
Query: 222 KTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH 281
QIR+ LP + +E++ + G+ + V+ A+ ++++ L+++ D S+F
Sbjct: 140 GAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDASNFPPGRF 199
Query: 282 SPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQ 341
P D PH PSM + NY SN P P
Sbjct: 200 GPPGPVGID---PHSQRGYLPPSMPD--YHARNYSSNMAAPGPRF--------------- 239
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
F +++VFRM+C + VG +IG+ + LQ+E G +K+ +P S+E++I IS+ E
Sbjct: 240 -FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHE 298
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRST 460
+ PAQ+A+L + +RI + DK + +T RLLVPS IGCL G+ GS ++EMR+ T
Sbjct: 299 NSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKIT 358
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY------------ 508
GA I+I E++P C DELVQ+ G Q+ +DAL+ +T R+R +
Sbjct: 359 GAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPP 418
Query: 509 ---------RDFFQKETPPSSTG-----PTGSALVVEAASPIDITPAREV---------- 544
Q+ PP TG P S P D+ R
Sbjct: 419 YPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGA 478
Query: 545 ----------QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVIN 594
Q P S A P+ EA ++ ETV ++ R+ N
Sbjct: 479 DRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVP--PADFRKGAVAGTN 536
Query: 595 RVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQIS 654
+V P + EV++P + + + + L +MSGA++++ +P ++ I
Sbjct: 537 QVATP---SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIIC 593
Query: 655 GTPEQVERAQSVLQGFILS 673
G P+Q ++AQS+L FI
Sbjct: 594 GDPDQTKKAQSLLHAFIFC 612
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 31/215 (14%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
M + + N S+N A P+ + +R++C + G +IGK GS I++++ TGA I
Sbjct: 220 MPDYHARNYSSNMAAPGPRF-FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASI 278
Query: 113 NVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
+ E EER+I IS E SPAQ+A+ +H RI ES
Sbjct: 279 KIIEPNSDSEERVIVISAH-----ENSEMMHSPAQDAVLRVHSRISESS----------- 322
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
+ V R++V H+GCLLGKGG II +MR T IRI +
Sbjct: 323 -------------MDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIF-GNE 368
Query: 233 SLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+PRC ++E+VQV G ++++A+ I+ R+R+
Sbjct: 369 QIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 403
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 266/582 (45%), Gaps = 89/582 (15%)
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
A A + +R++ GG GE EEE G VG RM+ + VGC
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVG------------CRMLAAGGQVGC 125
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
+LGKGGK +E+MR E+ QIR+ +P C +E++ + G + + A+ ++S+ L
Sbjct: 126 VLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCL 185
Query: 266 RESQHRDRSHFH-GRLHSPDRFFPDDDYV---PHMNNTARRPSMDG--ARFSGSNYRSNN 319
+++ + S+F GR F P V P +++ ++R + + N+ SN
Sbjct: 186 QDNPRLETSNFSTGR-----SFGPPGSGVGCPPGVDSHSQRSYLPPHIPDYHARNFSSNV 240
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P P + F +++VFRM+C + VG +IG+ + LQ++ G
Sbjct: 241 AAPGP----------------RFFIEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGA 284
Query: 380 DLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
+KV D V SDE++I IS+ E + PAQ+A+L + +RI + DK + + RLLVP
Sbjct: 285 SVKVIDAVADSDERVIVISARENSEMMHSPAQDAVLRVYSRISEASMDKSSAVPARLLVP 344
Query: 440 SSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
S IGCL G+ GS ++EMR TGA+I+I E++P C DELVQ+ G Q+ +DAL+
Sbjct: 345 SQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLH 404
Query: 499 VTTRLRSYL---------------------YRDFFQKETPPSSTG-----PTGSALVVEA 532
+T R+R + + Q PP +G P
Sbjct: 405 ITGRIRDVIIPPKPHPSGGMSPYPPAGSTPHHPSRQDPAPPHHSGGMPPYPMHPFRPNHP 464
Query: 533 ASPIDITPAREVQTVTDPPAATHQSVQIPAT------------SQPSKEAAGSVSETVKQ 580
P D+ R P + +IP + QPS ++T
Sbjct: 465 MGPFDVADHRPPGQHPAHPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEAQTADA 524
Query: 581 NES---------ERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSE 631
S R+ V N+V P T +T EVV+P + + + + L +
Sbjct: 525 PRSIPDKGLAMDSRKGSVAGSENQVATP--TSTTTEVVIPCKYIGFICGTNGSDLAEIQK 582
Query: 632 MSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+SGA++++ + +P T + + G PEQ ++AQS++ FI
Sbjct: 583 ISGAAITVHDPKPGDTDASVFVCGDPEQTKKAQSLIHAFIFC 624
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
N S+N A P+ + +R++C + GG+IGK G+ I++++ TGA + V + +
Sbjct: 235 NFSSNVAAPGPRF-FIEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVA 293
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
+ER+I IS R+ M SPAQ+A+ ++ RI E+
Sbjct: 294 DSDERVIVIS---ARENSEMM--HSPAQDAVLRVYSRISEAS------------------ 330
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ V R++V H+GCLLGKGG II +MR T IRI + +PRC
Sbjct: 331 ------MDKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIF-GNEQIPRCAQ 383
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPH 295
++E+VQV G+ ++++A+ I+ R+R+ + H G + SP +P PH
Sbjct: 384 RNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGGM-SP---YPPAGSTPH 435
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 243/483 (50%), Gaps = 70/483 (14%)
Query: 55 NNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAW 111
++ S + R N+ D S+ + T YRILC K G V+G+ G I+K++R+ T A
Sbjct: 16 HSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAK 75
Query: 112 INVHELIPGDEERII-------------EISDTRRRDPEGRMPSFSPAQEALFLIHDRIL 158
I V + IPG +ER+I E ++ + D G S AQ+AL IHD+I+
Sbjct: 76 IRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIV 135
Query: 159 ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR 218
+ +E+ E + V R++V VGCLLGKGG II+Q+R
Sbjct: 136 SDEIHDEVANDEKSE--------------SADDVTARILVQGNQVGCLLGKGGSIIQQLR 181
Query: 219 METKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFH- 277
T IR+LP ++ LP+C S+E+VQ+ G + V+ A+ IS+RL + ++
Sbjct: 182 SNTGAGIRVLPSEN-LPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Query: 278 ------GRLHSPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYRSNNYGPRPSGYSI 329
R + +PH+ ++T P +D R SG Y
Sbjct: 241 IIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPYR-SGPQY-------------- 285
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVD 388
P++++ E+ R+LC + +G VIG+S V ++ + G +KV + D
Sbjct: 286 -----PVTET------EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKD 334
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
S E++I ISS E P + + PA EAL+ + ++ + + +TRL+VPSS++GC+ G
Sbjct: 335 ASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHSSTRLVVPSSKVGCIIG 392
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G +++MRR TGA I++ S+ + P +S DELVQ+ G AR AL E+ +RLR+
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRT 452
Query: 508 YRD 510
RD
Sbjct: 453 LRD 455
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 680 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 739
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 740 QSLLQGFI 747
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 243/483 (50%), Gaps = 70/483 (14%)
Query: 55 NNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAW 111
++ S + R N+ D S+ + T YRILC K G V+G+ G I+K++R+ T A
Sbjct: 16 HSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAK 75
Query: 112 INVHELIPGDEERII-------------EISDTRRRDPEGRMPSFSPAQEALFLIHDRIL 158
I V + IPG +ER+I E ++ + D G S AQ+AL IHD+I+
Sbjct: 76 IRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIV 135
Query: 159 ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR 218
+ +E+ E + V R++V VGCLLGKGG II+Q+R
Sbjct: 136 SDEIHDEVANDEKSE--------------SADDVTARILVQGNQVGCLLGKGGSIIQQLR 181
Query: 219 METKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFH- 277
T IR+LP ++ LP+C S+E+VQ+ G + V+ A+ IS+RL + ++
Sbjct: 182 SNTGAGIRVLPSEN-LPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Query: 278 ------GRLHSPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYRSNNYGPRPSGYSI 329
R + +PH+ ++T P +D R SG Y
Sbjct: 241 IIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPYR-SGPQY-------------- 285
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVD 388
P++++ E+ R+LC + +G VIG+S V ++ + G +KV + D
Sbjct: 286 -----PVTET------EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKD 334
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
S E++I ISS E P + + PA EAL+ + ++ + + +TRL+VPSS++GC+ G
Sbjct: 335 ASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHSSTRLVVPSSKVGCIIG 392
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G +++MRR TGA I++ S+ + P +S DELVQ+ G AR AL E+ +RLR+
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRT 452
Query: 508 YRD 510
RD
Sbjct: 453 LRD 455
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 681 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 740
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 741 QSLLQGFI 748
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 239/452 (52%), Gaps = 59/452 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E +PG EER+I I + RR
Sbjct: 38 TVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTI 97
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H+R+ + F E+ EE +V
Sbjct: 98 DDAEDKV---CPAQDALFRVHERLATDE---SFGNEDSEEI--------------SPQVT 137
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC+LGKGG II+ +R ET QIR+L +DH +P C +E++Q+ GD+
Sbjct: 138 VRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDH-IPACAISGDELLQISGDMVV 196
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV------PHMNNTARRPSMDG 307
VK A+ +SSRL + + + L P +P ++ P + T P G
Sbjct: 197 VKKALCQVSSRLHNNPSKSQHLLASSLTQP---YPGGTHLGGSSAAPVVGITPVIPPYGG 253
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
Y+ + G PS Y P D ++ R+LC VG VIG+
Sbjct: 254 -------YKGDVAGDWPSLYQ------PRRDESS---AKEFSLRLLCAAANVGGVIGKGG 297
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
GI++ ++ E G +KVA D D+ IIT+S++E +D + P +A + +Q R +
Sbjct: 298 GIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEKSD 357
Query: 427 DK--DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELV 483
+ + TTRLLV +S IGCL G+ GS ++E+RR++ ANI+ILS+E VP + +E+V
Sbjct: 358 SELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMV 417
Query: 484 QIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
QI G + AR ALV++ TRL++ +FF++E
Sbjct: 418 QISGGLDVARHALVQIATRLKA----NFFERE 445
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 20/242 (8%)
Query: 318 NNYGPRPSGYSIEAGAA---PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
N++G R S Y+ G P D+ P +D V+R LC K+G +IG I + L+
Sbjct: 6 NSHGKRYSDYTETGGGKRRNPGDDTYAPG-PDDTVYRYLCASRKIGSIIGRGGEIAKQLR 64
Query: 375 NEIGVDLKVADPVDGSDEQIITISSE-------EGPDDELFPAQEALLHIQTRIV---DL 424
E +++ + V G +E++ITI S + +D++ PAQ+AL + R+
Sbjct: 65 TETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVHERLATDESF 124
Query: 425 G-ADKDNI---ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGT 479
G D + I +T RLLVPS +IGC+ G+ G + + +R TGA I++LS++ +PAC
Sbjct: 125 GNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISG 184
Query: 480 DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASP-IDI 538
DEL+QI G++ + AL +V++RL + + + + P G+ L +A+P + I
Sbjct: 185 DELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPGGTHLGGSSAAPVVGI 244
Query: 539 TP 540
TP
Sbjct: 245 TP 246
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 31/198 (15%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG-DEERIIEIS 129
+D S + R+LC GGVIGK G IIK IRQ +GA I V D++ II +S
Sbjct: 270 RDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVS 329
Query: 130 DTR-RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
DP SP +A + R E E+ Y
Sbjct: 330 AKEFFEDP------VSPTIDAAVRLQLRCSEKSDS----ELAEQSY-------------- 365
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
TR++VS +GCL+GKGG II ++R ++ IRIL +++ +P+ + EE+VQ+
Sbjct: 366 ----TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKEN-VPKVAAEDEEMVQIS 420
Query: 249 GDINNVKNAVAIISSRLR 266
G ++ ++A+ I++RL+
Sbjct: 421 GGLDVARHALVQIATRLK 438
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 249/500 (49%), Gaps = 88/500 (17%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--------- 128
+ +R+LC K GGVIGK GSII IR TG + + E +PG EER+I
Sbjct: 31 SVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSA 90
Query: 129 -----------SDTRRRDPEGR---------------------MPSFSPAQEALFLIHDR 156
S+++ +D E + + S A+ L+ +R
Sbjct: 91 EQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFER 150
Query: 157 ILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQ 216
+ E +GG E ++ Y G R+++ VGC+LGKGG +I++
Sbjct: 151 VAEDEGGD----ESKKGYFG-----------------LRLLILSNQVGCILGKGGSVIKR 189
Query: 217 MRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF 276
M E+ QIRILP++ +P C S S+E+VQ+ G + V+ A+ + +L E+ RD
Sbjct: 190 MSAESGAQIRILPKEE-IPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESL 248
Query: 277 HGRL-----HSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEA 331
L HS +F P+ R + GA F+ + P
Sbjct: 249 PTNLTGPSSHSYGQFPPNK----------RTFAGQGASFATGPNEIPVFHSAPMIPKFHE 298
Query: 332 GAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
GA P E L FR+LCP + VG +IG+ I+++LQ E ++KV + + GS+
Sbjct: 299 GAILGRMRPPP---EILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSE 355
Query: 392 EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-KDNIITTRLLVPSSEIGCLEGRD 450
+ II IS PDD + P QEA+ +Q RI D K++ + R++V S IGCL G+
Sbjct: 356 DCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSKEHSMLARVIVSSKHIGCLLGKG 415
Query: 451 GS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR 509
GS ++EMR +GA+I++L +++ P CVS DE++Q+ G I+A DAL+++TTRLR+ +R
Sbjct: 416 GSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFR 475
Query: 510 DFFQKETPPSSTGPTGSALV 529
D F PS+ P+ SA +
Sbjct: 476 DAF-----PSANFPSNSAFL 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P++T +T+EVV+P V ++ ++ L + ++S A+V + + P + I ISGTPE
Sbjct: 583 PIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVETKIIISGTPE 642
Query: 659 QVERAQSVLQGFILSTQDA 677
Q AQS++Q F++S +++
Sbjct: 643 QTNAAQSLIQAFVMSERES 661
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 239/452 (52%), Gaps = 59/452 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E +PG EER+I I + RR
Sbjct: 38 TVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTI 97
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H+R+ + F E+ EE +V
Sbjct: 98 DDAEDKV---CPAQDALFRVHERLATDE---SFGNEDSEEI--------------SPQVT 137
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC+LGKGG II+ +R ET QIR+L +DH +P C +E++Q+ GD+
Sbjct: 138 VRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDH-IPACAISGDELLQISGDMVV 196
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV------PHMNNTARRPSMDG 307
VK A+ +SSRL + + + L P +P ++ P + T P G
Sbjct: 197 VKKALCQVSSRLHNNPSKSQHLLASSLTQP---YPGGTHLGGSSAAPVVGITPVIPPYGG 253
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
Y+ + G PS Y P D ++ R+LC VG VIG+
Sbjct: 254 -------YKGDVAGDWPSLYQ------PRRDESS---AKEFSLRLLCAAANVGGVIGKGG 297
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
GI++ ++ E G +KVA D D+ IIT+S++E +D + P +A + +Q R +
Sbjct: 298 GIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEKSD 357
Query: 427 DK--DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELV 483
+ + TTRLLV +S IGCL G+ GS ++E+RR++ ANI+ILS+E VP + +E+V
Sbjct: 358 SELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMV 417
Query: 484 QIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
QI G + AR ALV++ TRL++ +FF++E
Sbjct: 418 QISGGLDVARHALVQIATRLKA----NFFERE 445
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 20/242 (8%)
Query: 318 NNYGPRPSGYSIEAGAA---PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
N++G R S Y+ G P D+ P +D V+R LC K+G +IG I + L+
Sbjct: 6 NSHGKRYSDYTETGGGKRRNPGDDTYAPG-PDDTVYRYLCASRKIGSIIGRGGEIAKQLR 64
Query: 375 NEIGVDLKVADPVDGSDEQIITISSE-------EGPDDELFPAQEALLHIQTRIV---DL 424
E +++ + V G +E++ITI S + +D++ PAQ+AL + R+
Sbjct: 65 TETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVHERLATDESF 124
Query: 425 G-ADKDNI---ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGT 479
G D + I +T RLLVPS +IGC+ G+ G + + +R TGA I++LS++ +PAC
Sbjct: 125 GNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISG 184
Query: 480 DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASP-IDI 538
DEL+QI G++ + AL +V++RL + + + + P G+ L +A+P + I
Sbjct: 185 DELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPGGTHLGGSSAAPVVGI 244
Query: 539 TP 540
TP
Sbjct: 245 TP 246
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 31/198 (15%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG-DEERIIEIS 129
+D S + R+LC GGVIGK G IIK IRQ +GA I V D++ II +S
Sbjct: 270 RDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVS 329
Query: 130 DTR-RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
DP SP +A + R E E+ Y
Sbjct: 330 AKEFFEDP------VSPTIDAAVRLQLRCSEKSDS----ELAEQSY-------------- 365
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
TR++VS +GCL+GKGG II ++R ++ IRIL +++ +P+ + EE+VQ+
Sbjct: 366 ----TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKEN-VPKVAAEDEEMVQIS 420
Query: 249 GDINNVKNAVAIISSRLR 266
G ++ ++A+ I++RL+
Sbjct: 421 GGLDVARHALVQIATRLK 438
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 253/497 (50%), Gaps = 61/497 (12%)
Query: 41 HRGNNNNNTNNIMNNNTSI--NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSG 98
HR ++ ++ N S N ++ P D T YR LC K G +IG+ G
Sbjct: 4 HRNSHGKRQSDFTENGGSKRRNPGDDTYAPGPDD------TVYRYLCASRKIGSIIGRGG 57
Query: 99 SIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP--EGRMPSFSPAQEALFLIHDR 156
I K +R T A I + E +PG +ER++ I T R+ +G PAQ+ALF +H+R
Sbjct: 58 EIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRVHER 117
Query: 157 ILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQ 216
+ +G G E+ EE +V R++V +GC++GKGG+II+
Sbjct: 118 LASDEGLGN---EDSEEIS--------------PQVTVRLLVPSDQIGCIIGKGGQIIQG 160
Query: 217 MRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF 276
+R ET QIR+L DH +P C +E++Q+ GD V+ A+ +SSRL + + +
Sbjct: 161 IRSETGAQIRVLSNDH-IPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQHLL 219
Query: 277 HGRLHSPDRFFPDDDYV------PHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIE 330
L P +P ++ P + T P G Y+ + G PS Y
Sbjct: 220 ASSLTQP---YPGSTHLGGSSTAPVVGITPVIPPYGG-------YKGDVAGDWPSLYQ-- 267
Query: 331 AGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP-VDG 389
P D ++ R+LC VG VIG+ GI++ ++ E G +KVA D
Sbjct: 268 ----PRRDESS---AKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDP 320
Query: 390 SDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG--ADKDNIITTRLLVPSSEIGCLE 447
D+ IIT+S++E +D + P +A + +Q R + + TTRLLV +S IGCL
Sbjct: 321 DDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEKSDLESAEQSYTTRLLVSTSRIGCLI 380
Query: 448 GRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ GS+ +E+RR++ AN++ILS+E VP + DE+VQI G + AR+ALV++ TRL++
Sbjct: 381 GKGGSIITEIRRTSRANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKA- 439
Query: 507 LYRDFFQKETPPSSTGP 523
+FF++E S+ P
Sbjct: 440 ---NFFEREGSLSAFPP 453
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 252/503 (50%), Gaps = 65/503 (12%)
Query: 34 QPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGV 93
+PN ++ +G+N N ++ S NS + T YRILC K GGV
Sbjct: 40 RPNFQFKRKGSNKRGRWNNSSHEQSFGNSQ------------VADTVYRILCPSKKIGGV 87
Query: 94 IGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--------------SDTRRRDPEGR 139
IGK G I+K++R+ T A I V + +PG +ER+I I D R + +
Sbjct: 88 IGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDH 147
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT-RMVV 198
M PAQ+AL +H+RI+E D GG E++ E N V T R++V
Sbjct: 148 MEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNE----------------NTVVTARLLV 191
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VGCLLGK G +I+++R ET IR+LP +H LP C S+E+VQ+ G K A+
Sbjct: 192 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEH-LPTCAMSSDELVQISGKPAVAKKAL 250
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRF---FPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+S+ L ++ +D+ P F F + P + P +S N
Sbjct: 251 YEVSTLLHQNPRKDK--------PPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNS 302
Query: 316 RSNNYGPRP--SGYSIEAGAAPMS-DSVQPFYG----EDLVFRMLCPIDKVGRVIGESEG 368
S P P GY + P D V +G + ++LCP K+G VIG+
Sbjct: 303 NSQGVPPMPWMGGYRSQPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGF 362
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK 428
V+ LQ E G + V D + S+E++I +SS E + EA+L +Q + + +DK
Sbjct: 363 NVKQLQQETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEY-SDK 421
Query: 429 DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
+TTRLLVPSS++GC+ G+ G ++EMRR T A+I++ S+E+ P C S +ELVQI G
Sbjct: 422 GG-MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 480
Query: 488 EIQAARDALVEVTTRLRSYLYRD 510
A+DAL E+ +RLR RD
Sbjct: 481 NFGVAKDALAEIASRLRVRCLRD 503
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
S++E +P+ +V +I + SEM+GA V L + Q G++ +++I G+ E + A
Sbjct: 573 SSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAA 632
Query: 664 QSVLQGFILST 674
QS+LQ F+ S
Sbjct: 633 QSILQAFMASA 643
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 252/503 (50%), Gaps = 65/503 (12%)
Query: 34 QPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGV 93
+PN ++ +G+N N ++ S NS + T YRILC K GGV
Sbjct: 12 RPNFQFKRKGSNKRGRWNNSSHEQSFGNSQ------------VADTVYRILCPSKKIGGV 59
Query: 94 IGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP--------------EGR 139
IGK G I+K++R+ T A I V + +PG +ER+I I ++P +
Sbjct: 60 IGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDH 119
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT-RMVV 198
M PAQ+AL +H+RI+E D GG E++ E N V T R++V
Sbjct: 120 MEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNE----------------NTVVTARLLV 163
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VGCLLGK G +I+++R ET IR+LP +H LP C S+E+VQ+ G K A+
Sbjct: 164 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEH-LPTCAMSSDELVQISGKPAVAKKAL 222
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRF---FPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+S+ L ++ +D+ P F F + P + P +S N
Sbjct: 223 YEVSTLLHQNPRKDK--------PPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNS 274
Query: 316 RSNNYGPRP--SGYSIEAGAAPMS-DSVQPFYG----EDLVFRMLCPIDKVGRVIGESEG 368
S P P GY + P D V +G + ++LCP K+G VIG+
Sbjct: 275 NSQGVPPMPWMGGYRSQPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGF 334
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK 428
V+ LQ E G + V D + S+E++I +SS E + EA+L +Q + + +DK
Sbjct: 335 NVKQLQQETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEY-SDK 393
Query: 429 DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
+TTRLLVPSS++GC+ G+ G ++EMRR T A+I++ S+E+ P C S +ELVQI G
Sbjct: 394 GG-MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 452
Query: 488 EIQAARDALVEVTTRLRSYLYRD 510
A+DAL E+ +RLR RD
Sbjct: 453 NFGVAKDALAEIASRLRVRCLRD 475
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
S++E +P+ +V +I + SEM+GA V L + Q G++ +++I G+ E + A
Sbjct: 545 SSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAA 604
Query: 664 QSVLQGFILST 674
QS+LQ F+ S
Sbjct: 605 QSILQAFMASA 615
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 245/471 (52%), Gaps = 69/471 (14%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
T YR LC K G +IG+ G I K +R T + I + E +PG EER++ I S + +P
Sbjct: 43 TVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPF 102
Query: 138 GRMPSF-SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
G SPAQ+ALF +HDRI+ G +EE E +V RM
Sbjct: 103 GDTGELVSPAQDALFRVHDRIV----AGELPADEEPEEA--------------QQVTVRM 144
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ---------- 246
+V +GC++GKGG++I+ +R ET+ QIRIL +D LP C S+E++Q
Sbjct: 145 LVPSDQIGCVIGKGGQVIQNIRSETRAQIRIL-KDEHLPPCALSSDELLQAFGNVFWALT 203
Query: 247 --VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
++GD + V+ A+ ++SRL E+ R + H L S + T P+
Sbjct: 204 SQIIGDASVVRKALHQLASRLHENPSRSQ---HLLLSSSPNMY-------QSGGTFMTPN 253
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY--------GEDLVFRMLCPI 356
+D A G +YG GY + G D +Y ++ R++CP
Sbjct: 254 ID-APLVGVAPLMGSYG----GYKGDTG-----DWSHSYYSARRDESSAKEFSLRLVCPT 303
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
+G VIG+ GI++ ++ E G +KV D+ II IS++E +D P +A L
Sbjct: 304 GNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALR 362
Query: 417 IQTRIVDLGA--DKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVP 473
+Q R + D+++TTRLLVPSS IGCL G+ G++ SEMR T ANI+ILS+E +P
Sbjct: 363 LQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLP 422
Query: 474 ACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
S DE+VQI GE+ A +AL++VT RL++ L F++E ++ PT
Sbjct: 423 KVASEDDEMVQITGELNVASNALLQVTLRLKANL----FEREGAIAAIPPT 469
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 33/219 (15%)
Query: 318 NNYGPRP---SGYSIEAGAA---PMSDSVQPFYG-EDLVFRMLCPIDKVGRVIGESEGIV 370
N+YG R S Y G+ P D Q G ED V+R LCP+ K+G +IG I
Sbjct: 6 NDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIA 65
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITI--SSEE----GPDDELF-PAQEALLHIQTRIV- 422
+ L++E ++++ + + G +E+++TI SSEE G EL PAQ+AL + RIV
Sbjct: 66 KQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVHDRIVA 125
Query: 423 -DLGADKD----NIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
+L AD++ +T R+LVPS +IGC+ G+ G + +R T A I+IL E +P C
Sbjct: 126 GELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCA 185
Query: 477 SGTDELV------------QIVGEIQAARDALVEVTTRL 503
+DEL+ QI+G+ R AL ++ +RL
Sbjct: 186 LSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRL 224
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V TR++V +GCL+GKGG II +MR T+ IRIL +++ LP+ S +E+VQ+ G++
Sbjct: 380 VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKEN-LPKVASEDDEMVQITGEL 438
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
N NA+ ++ RL+ ++ R + P Y+P + +
Sbjct: 439 NVASNALLQVTLRLK-------ANLFEREGAIAAIPPTLPYLPMSDMS-----------D 480
Query: 312 GSNYRSNNYGPRPSGY 327
GS Y S + PR G+
Sbjct: 481 GSKYGSRDSQPRERGF 496
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 31/197 (15%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
+D S + R++C GGVIGK G IIK IRQ +GA I V ++ II IS
Sbjct: 287 RDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISA 346
Query: 131 TR-RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGG 189
DP SP +A + R E E E
Sbjct: 347 KEFFEDP-------SPTIDAALRLQPRCSEK-------AERESS---------------D 377
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
+ V TR++V +GCL+GKGG II +MR T+ IRIL +++ LP+ S +E+VQ+ G
Sbjct: 378 SVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKEN-LPKVASEDDEMVQITG 436
Query: 250 DINNVKNAVAIISSRLR 266
++N NA+ ++ RL+
Sbjct: 437 ELNVASNALLQVTLRLK 453
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 237/490 (48%), Gaps = 68/490 (13%)
Query: 63 NNRANSNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
N R NS ++ T YR LC K G +IG+ G IIK +R T + I V E +P
Sbjct: 23 NKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVP 82
Query: 120 GDEERIIEI----SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYG 175
G EER++ I +T + G SPAQ+ALF +HD+++ D E++ E
Sbjct: 83 GCEERVVTIYSPSDETNEYEDSGNY--ISPAQDALFRVHDKVIAED----LQVEDDSE-- 134
Query: 176 GGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP 235
G +V +++V +GC++GKGG+I++ +R ET IRIL +D LP
Sbjct: 135 ------------GSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRIL-KDEHLP 181
Query: 236 RCVSMSEEIVQVVGDINNVKNAVAIISSRLRE----SQHRDRSHFH------GRLHSPDR 285
C S+E+VQ+ G+ +K A+ I+SRL + SQH S G L P
Sbjct: 182 PCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVGPSA 241
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG 345
P P M P +G RS PR
Sbjct: 242 AAPIVGIAPLMG-----PYGGFKGDTGDWSRSLYSAPR-----------------DELAS 279
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
++ R++CP +G VIG+ I+ ++ E G +KV V D+ +ITIS++E D
Sbjct: 280 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKE-IYD 338
Query: 406 ELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
P EA + +Q R + +I TTRLLVPSS IGCL G+ G+ + EMR+ T A
Sbjct: 339 HYSPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKA 398
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
I+I +E +P S DE+VQI G++ A+DAL++++ RLR+ + F +E S+
Sbjct: 399 IIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRA----NVFDREGAMSAIL 454
Query: 523 PTGSALVVEA 532
P L V A
Sbjct: 455 PVLPYLPVSA 464
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 52/327 (15%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D V+R LCP K+G +IG I++ L+ + ++V + V G +E+++TI S P D
Sbjct: 40 QDTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYS---PSD 96
Query: 406 E----------LFPAQEALLHIQTRIV--DLGADKDN----IITTRLLVPSSEIGCLEGR 449
E + PAQ+AL + +++ DL + D+ +T +LLVPS +IGC+ G+
Sbjct: 97 ETNEYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGK 156
Query: 450 DGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G + + +R TGA I+IL E +P C +DELVQI GE + AL ++ +RL
Sbjct: 157 GGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPS 216
Query: 509 RD-FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPS 567
R P+ GS + AA+PI V I P
Sbjct: 217 RSQHLLVSAVPNVYSSVGSLVGPSAAAPI---------------------VGIAPLMGPY 255
Query: 568 KEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLT 627
G + + S R+++ + +L VV P + +I K T++
Sbjct: 256 GGFKGDTGDWSRSLYSAPRDELAS----------KEFSLRVVCPTANIGAVIGKGGTIIN 305
Query: 628 RFSEMSGASVSLVEGQPEGTQKIIQIS 654
+ + SGA++ + EG +I IS
Sbjct: 306 QIRQESGATIKVDSSVAEGDDCLITIS 332
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 254/516 (49%), Gaps = 67/516 (12%)
Query: 28 RYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHD 87
+YN P+ N G +N N N A P P ++R+LCH
Sbjct: 15 QYNAAGMPDPNPTANGLSNKRPKQPPANQ-------NAAAPLPLPPG---HVSFRLLCHA 64
Query: 88 MKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS----F 143
+ GG+IGKSG+IIK ++Q +GA I + E +R+I + + + R+ S
Sbjct: 65 SRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRVESEEVDV 124
Query: 144 SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHV 203
S AQE L + +RILE E + G GGG V+ RM+
Sbjct: 125 SRAQEGLIRVFERILE-------VAAESD--------GINVVAGGGGVVSCRMLAGSKQA 169
Query: 204 GCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISS 263
G ++GKGGK++E++R + +IR+L LP C +EE++++ GDI +VK A+ +S
Sbjct: 170 GSVIGKGGKVVEKIRKDCGVKIRVL--TDKLPVCAGPNEEMIEIEGDILSVKKALIAVSR 227
Query: 264 RLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN---Y 320
L++ Q D+ R+ S F + VP R + R NN
Sbjct: 228 CLQDCQPVDKP----RVGSSKYF----EAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSC 279
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
P P + +E P D + +++VF++LCP D VG VIG+ I++ LQNE G
Sbjct: 280 APVPHNFLLETDRVPSLD--MKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGAS 337
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPS 440
+ + + SDE++IT+ + E P+ AQ+A++ ++ +RL+VPS
Sbjct: 338 ITIGATIAESDERLITVIASENPESRYSAAQKAVV---------------LVFSRLVVPS 382
Query: 441 SEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+++GCL G+ G +S+MR++TG +I+IL+ +++P CV +++VQI G+ +DA+ V
Sbjct: 383 NQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHV 442
Query: 500 TTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASP 535
T RLR L+ ST T S V+ ASP
Sbjct: 443 TGRLRDNLFSSAL-------STPVTRSTTVITEASP 471
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+VT +T+E+ +P+ + + ++ + LTR ++SGA V + E + + +II ISGTP++
Sbjct: 621 IVTNTTVEIRVPENVIGSVYGENDSNLTRLRQISGAKVIVHEPRLGSSDRIIVISGTPDE 680
Query: 660 VERAQSVLQGFILSTQDA 677
+ AQS+LQ FIL+ Q
Sbjct: 681 TQAAQSLLQAFILTGQSC 698
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 239/470 (50%), Gaps = 57/470 (12%)
Query: 54 NNNTSINNSNNRAN--SNPKDPSLMVT--TTYRILCHDMKAGGVIGKSGSIIKSIRQHTG 109
++++ + N R N ++ SL+ T +R LC K G VIG+ G I+K +R T
Sbjct: 15 HSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTK 74
Query: 110 AWINVHELIPGDEERIIEI----SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGG 165
A I + + +PG +ER++ I +T D + SPAQ+ALF +H R++ D
Sbjct: 75 AKIRIGDALPGCDERVVTIHSSSEETNHFDETDDL--VSPAQDALFRVHQRVIAEDARED 132
Query: 166 FYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQI 225
E N V +++V +GC++GKGG+I++ +R ET QI
Sbjct: 133 EDEER-------------------NHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
Query: 226 RILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDR 285
RIL +D LP C ++E+VQ+ G+ VK A+ I++++R++ R + H L S
Sbjct: 174 RIL-KDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQ-HL---LASA-- 226
Query: 286 FFPDDDYVPHMNNT----ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQ 341
VP T A P M A F G+ Y +S AP ++
Sbjct: 227 -------VPGGYATGGPGAGAPIMGVAPFVGAY---GGYKGDTGDWSRSLYPAPRDEASM 276
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
+ R +CP +G VIG+ I+ ++ + G +KV D+ +I IS++E
Sbjct: 277 ----REFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKE 332
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRR 458
+D P EA + +Q R + I+ TTRLLVP+S IGCL G+ G++ +EMRR
Sbjct: 333 FFEDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRR 392
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
T ANI+ILS++ +P S DE+VQI G++ A+DALV+ TRLR+ L+
Sbjct: 393 LTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLF 442
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 114/250 (45%), Gaps = 45/250 (18%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
P+D + M + R +C GGVIGK G+II IRQ +GA I V ++ +I IS
Sbjct: 270 PRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIIS 329
Query: 130 DTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGG 189
E SFSP EA + R E + E + G
Sbjct: 330 TK-----EFFEDSFSPTIEAAVRLQPRCSE---------KVERD-------------SGI 362
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
TR++V +GCL+GKGG I+ +MR TK IRIL +D+ LP+ S +E+VQ+ G
Sbjct: 363 VSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDN-LPKIASEDDEMVQISG 421
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
D++ K+A+ +RLR + G F P Y+P S+DG+
Sbjct: 422 DLDVAKDALVQALTRLRANLFDKERAVSG-------FLPVLPYLP--------ASVDGS- 465
Query: 310 FSGSNYRSNN 319
G NY S +
Sbjct: 466 -DGLNYDSRD 474
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 174/630 (27%), Positives = 289/630 (45%), Gaps = 77/630 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTR 132
YRILC D G VIGK+G +I SIRQ T A + V + PG ++R+I I D
Sbjct: 38 VYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVE 97
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
D AQ+AL +H I S G+ E++ +R
Sbjct: 98 IDDEFAGKEPLCAAQDALLKVHVAIANSIAA---IGDSEKKRK--------------DRD 140
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMSEEIVQVVGD 250
+++V ++GK G I+++R +T+ I++ +D + P C + V + G+
Sbjct: 141 ECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGE 200
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRL---------------HSPDRFFPDDD---- 291
VK A+ +SS + + R+ + + P +P D
Sbjct: 201 SEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPIVT 260
Query: 292 --YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLV 349
VP + P + G +G+++ + + A P+ V E+L+
Sbjct: 261 PRAVPQIIGATNVPDLQGYADAGNSW------------PMYSSALPVVSGVGASRSEELI 308
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
RMLCP DK+GRVIG+ ++ ++ G ++V D DE +I I++ E P D
Sbjct: 309 IRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSM 368
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILS 468
A EA+L +Q +I D + D ++ RLLVPS IGC+ G+ GS+ +E+R+ T A+++I S
Sbjct: 369 AVEAVLLMQGKIND---EDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRI-S 424
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP---PSSTGPTG 525
+ + P C DELV++ G + RDAL+++ RLR + R+ P S P
Sbjct: 425 KGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGAESLYPGS 484
Query: 526 SALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESER 585
+ L + S + P V D A + + + + S P G S + N
Sbjct: 485 AGLSLP--SMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSPY---GGYGSLPMGDNGYGS 539
Query: 586 REDVPT-VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQP 644
T + +P P STL++++P AV K++ K + ++SGAS+ + + +
Sbjct: 540 MSSYATKLYGGLPPP----STLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKS 595
Query: 645 EGTQKIIQISGTPEQVERAQSVLQGFILST 674
+I ISGTPEQ A++++Q FI++T
Sbjct: 596 ARGDRIALISGTPEQKRAAENLIQAFIMAT 625
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 58/363 (15%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI------SS 399
E +V+R+LCP + +G VIG++ ++ ++ E +KV DP GS +++ITI
Sbjct: 35 ELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKE 94
Query: 400 EEGPDDE------LFPAQEALLHIQTRIVDLGA----------DKDNIITTRLLVPSSEI 443
+ DDE L AQ+ALL + I + A D+D ++LVPSS+
Sbjct: 95 DVEIDDEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKDRDE---CQILVPSSQS 151
Query: 444 GCLEGRDGS-LSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEV 499
+ G+ G+ + ++R T ANI++ +++ +C D V I GE +A + AL V
Sbjct: 152 ANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAV 211
Query: 500 TTRLRSY-----LYRDFFQKETPPSSTGPTGSAL-----VVEAASPIDITPAREVQTVTD 549
++ + + + D E PPS P+ + + A+ PI +TP Q +
Sbjct: 212 SSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPI-VTPRAVPQIIGA 270
Query: 550 PPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVV 609
Q S P +A V V + SE L+ R ++
Sbjct: 271 TNVPDLQGYADAGNSWPMYSSALPVVSGVGASRSEE--------------LIIR----ML 312
Query: 610 LPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQG 669
P + ++I K + + + SGA + + + + + +I I+ T + ++
Sbjct: 313 CPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEA 372
Query: 670 FIL 672
+L
Sbjct: 373 VLL 375
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 297/624 (47%), Gaps = 67/624 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--------SDT 131
YRILC D G VIGKSG +I SIRQ T A I V + PG ++R+I I
Sbjct: 38 VYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVE 97
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+ + P PAQ+AL +H I+ + E + ++
Sbjct: 98 VDDEFNDKQP-LCPAQDALLKVHAAIVNA------VASLENSD-----------KKKKDK 139
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEIVQVVG 249
+++V ++GK G I+++R +T+ I+I +D + P C + V + G
Sbjct: 140 EECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAG 199
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRL--HSPDRFFPDDDYVPHMNNTARRPSMDG 307
D VK A+ IS+ + + R+ + P P D VP PS D
Sbjct: 200 DSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSD--VPIYPAGGFYPSADS 257
Query: 308 ARFSGS--NYRSNNYGPRPSGYSIEAGAAPMSDSVQPF---YG----EDLVFRMLCPIDK 358
+ S + + P GYS P+ S P YG E+L+ R+LCP DK
Sbjct: 258 IVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDK 317
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
+GRVIG ++ ++ G ++V D DE +IT++S E DD A EA+L +Q
Sbjct: 318 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQ 377
Query: 419 TRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVS 477
+I D + D+ + RLLVPS IGC+ G+ GS ++E+R+ T A+++I S+ E P C
Sbjct: 378 AKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI-SKSERPKCAD 433
Query: 478 GTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT------GSALVVE 531
DEL+++VGE+ + RDALV++ RLR +D ++T +++ T G+ L V
Sbjct: 434 ANDELIEVVGEVGSVRDALVQIVLRLRDDALKD---RDTGHNTSAGTDSLYSGGAGLSVS 490
Query: 532 AASPIDITPAREVQTVT-DPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVP 590
+ P A V ++ D A T + + ++S + SV E + S
Sbjct: 491 SVLP----SAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSS--- 543
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+ +P P ST ++V+P AV K++ K + ++SGA + + + + ++
Sbjct: 544 KLYGGLPTP----STFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRV 599
Query: 651 IQISGTPEQVERAQSVLQGFILST 674
ISGTPEQ A++++Q FI++T
Sbjct: 600 ALISGTPEQKRTAENLIQAFIMAT 623
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 45/359 (12%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------- 397
E +V+R+LCP +G VIG+S ++ ++ + +KV DP G+ +++ITI
Sbjct: 35 ELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKE 94
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIVDLGADKDN-------IITTRLLVPSSEIGCL 446
E L PAQ+ALL + IV+ A +N ++LVPSS+ +
Sbjct: 95 EVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANV 154
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ G ++ +R T ANI+I +++ +C D V I G+ +A + AL ++
Sbjct: 155 IGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAIS-- 212
Query: 503 LRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPA 562
+ +Y+ ++E P +T P ++ S + I PA D + A
Sbjct: 213 --AIMYKFTPREEIPLDTTVPEAPPSII-IPSDVPIYPAGGFYPSADS--------IVSA 261
Query: 563 TSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPL---VTRS---TLEVVLPDYAVP 616
S P AA V E Q S+ P + +P+ +RS + V+ P +
Sbjct: 262 RSVPPVLAATHVPEL--QGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIG 319
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQ 675
++I + + + E SGA V + + + + + +I ++ T E V+ +S+ +L Q
Sbjct: 320 RVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST-ESVDDLKSMAVEAVLLLQ 377
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 234/468 (50%), Gaps = 53/468 (11%)
Query: 54 NNNTSINNSNNRANSNPKDPSL-MVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTG 109
++++ + N R N D S ++T T +R LC K G VIG+ G I+K +R T
Sbjct: 15 HSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIGRGGDIVKQLRADTK 74
Query: 110 AWINVHELIPGDEERIIEI----SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGG 165
A I + + +PG +ER++ I +T D G + SPAQ+ALF +H R++ D
Sbjct: 75 AKIRIGDALPGCDERVVTIHSSSEETNHFDETGDL--VSPAQDALFRVHQRVIAEDARED 132
Query: 166 FYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQI 225
E N V +++V +GC++GKGG+I++ +R ET QI
Sbjct: 133 EDDER-------------------NHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
Query: 226 RILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDR 285
RIL +D LP C ++E+VQ+ G+ VK A+ I++++R++ R + +
Sbjct: 174 RIL-KDDRLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGG-- 230
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFSGS--NYRSNNYGPRPSGYSIEAGAAPMSDSVQPF 343
A P M A F G+ Y+ + S Y A M
Sbjct: 231 -------YAAGGPGAGAPIMGVAPFVGAYGGYKGDTGDWSRSLYPAPRDEASM------- 276
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
+ R +CP +G VIG+ I+ ++ + G +KV D+ +I IS +E
Sbjct: 277 --REFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFF 334
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRRST 460
+D P EA + +Q R + I+ TTRLLVP+S IGCL G+ G++ +EMRR T
Sbjct: 335 EDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLT 394
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
ANI+ILS+E +P S DE+VQI G++ A+DALV+ TRLR+ L+
Sbjct: 395 KANIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLF 442
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 319 NYGPRPSGYS-IEAGAA-----PMSD--SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
+YG R +S +AG+ P +D S +D VFR LCP+ K+G VIG IV
Sbjct: 7 SYGKRSHSHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIGRGGDIV 66
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITI--SSEEG-----PDDELFPAQEALLHIQTRIV- 422
+ L+ + +++ D + G DE+++TI SSEE D + PAQ+AL + R++
Sbjct: 67 KQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETGDLVSPAQDALFRVHQRVIA 126
Query: 423 ----DLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVS 477
+ D+ N +T +LLVPS +IGC+ G+ G + + +R TGA I+IL + +P C
Sbjct: 127 EDAREDEDDERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCAL 186
Query: 478 GTDELVQIVGEIQAARDALVEVTTRLR 504
DELVQI GE + AL ++ ++R
Sbjct: 187 SNDELVQISGEAAVVKKALFQIAAQIR 213
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 114/250 (45%), Gaps = 45/250 (18%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
P+D + M + R +C GGVIGK G+II IRQ +GA I V ++ +I IS
Sbjct: 270 PRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIIS 329
Query: 130 DTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGG 189
E SFSP EA + R E + E + G
Sbjct: 330 MK-----EFFEDSFSPTIEAAVRLQPRCSE---------KVERD-------------SGI 362
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
TR++V +GCL+GKGG I+ +MR TK IRIL +++ LP+ S +E+VQ+ G
Sbjct: 363 VSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKEN-LPKIASEDDEMVQISG 421
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
D++ K+A+ +RLR + G F P Y+P S+DG+
Sbjct: 422 DLDVAKDALVQALTRLRANLFDKERAVSG-------FLPVLPYLP--------ASVDGS- 465
Query: 310 FSGSNYRSNN 319
G NY S +
Sbjct: 466 -DGLNYDSRD 474
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 251/523 (47%), Gaps = 88/523 (16%)
Query: 30 NHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVT---TTYRILCH 86
+H P++ HR + ++ N S R + +D SL++ T +R LC
Sbjct: 4 DHRMSPDHRDSHRKRSRPQSDYDDNGG-----SKRRYRGDDRD-SLVIDRDDTVFRYLCP 57
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPEGRMPSF 143
K G VIG+ G I+K +R T + I + E IPG +ER+I I SD +G
Sbjct: 58 VKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEK-VL 116
Query: 144 SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHV 203
SPAQ+ALF IHDR++ D E+ E G +V +++V +
Sbjct: 117 SPAQDALFRIHDRVVADDA----RSEDSPE--------------GEKQVTAKLLVPSDQI 158
Query: 204 GCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISS 263
GC+LG+GG+I++ +R ET QIRI+ +D ++P C S+E++Q+ G++ VK A+ I+S
Sbjct: 159 GCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIAS 217
Query: 264 RLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPR 323
RL E+ R ++ L S +P + H G R G +YG
Sbjct: 218 RLHENPSRSQN-----LLSSSGGYPAGSLMSHAG---------GPRLVGLAPLMGSYGRD 263
Query: 324 PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
+S P +D + R++ P++ + VIG+ ++ L+ E +KV
Sbjct: 264 AGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKV 319
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSS 441
++ +ITIS+ E +D P EA++ +Q + D ++ TTRLLVPSS
Sbjct: 320 DSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSS 379
Query: 442 EIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDEL------------------ 482
IGC+ G+ G+ ++EMRR T ANI+IL +E +P S DE+
Sbjct: 380 RIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQFLL 439
Query: 483 -----------------VQIVGEIQAARDALVEVTTRLRSYLY 508
VQI GE+ A++AL+++T+RLR+ ++
Sbjct: 440 SRLRYFTWSVNSNSNFDVQISGELDVAKEALIQITSRLRANVF 482
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 180/631 (28%), Positives = 295/631 (46%), Gaps = 78/631 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
YRILC + G VIGK+G +I SIRQ + A + V + PG + R+I I + E
Sbjct: 43 AYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIE 102
Query: 140 MPS-------FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
+ AQ+AL +H I S G ++ + N+
Sbjct: 103 IEDEFDNEKPLCAAQDALIKVHSAISNSIETAGDSEKKRK-----------------NKD 145
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP-RCVSMSEEIVQVVGDI 251
+++V L+GK G I+Q+R++T+T I+++P+D + P +M + +VG+
Sbjct: 146 ECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLVGES 205
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
VK A+ +S+ + + SP P D VP ++ PS
Sbjct: 206 EAVKRALFAVSTIMYK-------------FSPKEDIPLDTTVPETPHSIIIPSELPIYPP 252
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSD---------SVQPFYG--------------EDL 348
G Y +++ +P + GA M D + P Y E+L
Sbjct: 253 GGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLPVVSSLGASQSEEL 312
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELF 408
+ RMLCP DK+G++IG+ G ++ ++ G ++V D DE +ITI++ E D
Sbjct: 313 IVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDLKS 372
Query: 409 PAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQIL 467
A EA+L +Q +I D + D ++ RLLVPS IGC+ GR G+ ++E+R+ T A+IQI
Sbjct: 373 VAVEAVLLLQEKIND---EDDAPVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQI- 428
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF-FQKETPPSSTGPTGS 526
SR P DELV++VGE+ RDAL+++ RLR + ++ S S
Sbjct: 429 SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDIDHNRHIGSESLYAS 488
Query: 527 ALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERR 586
+ V+ A + PA D + + + S+ G S +++ N
Sbjct: 489 SSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGM----HSSRSHYGYDSYSMEDNGYGSM 544
Query: 587 EDVPTVI---NRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ 643
T + +R+P PL STLE+V+P AV K++ K L ++SGA+V + E +
Sbjct: 545 SSYATNLYEGHRLP-PL---STLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESK 600
Query: 644 PEGTQKIIQISGTPEQVERAQSVLQGFILST 674
++ ISGT E+ A++++Q FI++T
Sbjct: 601 SYRGDRVALISGTSEEKRAAENLIQAFIMAT 631
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 253/520 (48%), Gaps = 72/520 (13%)
Query: 37 NNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGK 96
N ++ NN + N+ ++ NP L V T YRILC K GGVIGK
Sbjct: 7 NVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNP----LPVDTVYRILCPSRKIGGVIGK 62
Query: 97 SGSIIKSIRQHTGAWINVHELIPGDEERIIEI--------------SDTRRRDPEGRMPS 142
G IIK +R+ T A I V + +PG +ER+I I D + + M
Sbjct: 63 GGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIMEP 122
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
+ AQ+AL +HDRI+E D GG +++ E GF V R++V
Sbjct: 123 YCAAQDALLKVHDRIVEEDLFGGMTSDDDNE---------NGF------VTARLLVPNNM 167
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VGCLLGK G +I+++R ET IR+LP DH LP C ++E+VQ+ + K A+ +S
Sbjct: 168 VGCLLGKRGDVIQRLRSETGANIRVLPADH-LPTCAMSTDELVQISAKPDVAKKALYEVS 226
Query: 263 SRLRESQHRDRSHFHGRLHSPDRFFPD-----------DDYVPHMNNTARRPSMDGARFS 311
+ L ++ +D+ +S F P PH N++ P M
Sbjct: 227 TLLHQNPRKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHSIPPMPIMGRY 286
Query: 312 GSNYRSNNYGP-----RPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
GS +S+ +GP P G+ E A + ++LC K+G VIG+
Sbjct: 287 GS--QSSGFGPGGFDDVPRGHVAEPSA-------------EFSMKILCSAGKIGGVIGKG 331
Query: 367 EGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
V+++Q + G + V D SDE++I +S+ E + +A+L +Q + D
Sbjct: 332 GSNVKVVQQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFS- 390
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
+ ITTRLLVPSS++GC+ G+ G ++EMRR T A+I++ S++E P C S +ELVQI
Sbjct: 391 -EKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQI 449
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTG 525
G+ A+DAL E+ +RLR RD P GP G
Sbjct: 450 SGKFGVAKDALAEIASRLRVRTLRDVNAGAEP----GPVG 485
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 230/457 (50%), Gaps = 52/457 (11%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII---------- 126
+ T YRILC K G V+G+ G I+K++R+ T A I V + IPG +ER+I
Sbjct: 41 IETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPE 100
Query: 127 ---EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
E ++ + D G M AQ+AL IHD+I+ + Y E +
Sbjct: 101 LTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADE----IYDEVAHDESS------- 149
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++V VGCLLGKGG II+Q+R +T IR+L ++ LP+C S+E
Sbjct: 150 ------DDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSEN-LPQCALQSDE 202
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
+VQ+ G + V+ A+ IS+RL + ++ + + + + + H N
Sbjct: 203 LVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHEN------ 256
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
M S P SG P+S++ E+ R+LC + +G VI
Sbjct: 257 PMLPHLHSHHPPPIPLLDPYRSGPQY-----PVSET------EEFSIRILCASELIGSVI 305
Query: 364 GESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIV 422
G+S V ++ + G +KV + D S E++I +SS E P + + P EAL+ + ++
Sbjct: 306 GKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVS 365
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE 481
+ + + +TRL+VPS+++GC+ G G ++EMRR TGA I++ S+ + P +S DE
Sbjct: 366 --ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDE 423
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPP 518
LVQ+ G AR AL E+ +RLR+ RD PP
Sbjct: 424 LVQVAGPPAIARGALTEIASRLRTRTLRDTSTANNPP 460
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 680 STIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQAKAA 739
Query: 664 QSVLQGFI 671
QS+L+GFI
Sbjct: 740 QSLLEGFI 747
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 236/480 (49%), Gaps = 71/480 (14%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGS 99
G + + + + S + R NS D S+ V T YRILC K G V+G+ G
Sbjct: 4 GKSRRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGD 63
Query: 100 IIKSIRQHTGAWINVHELIPGDEERII-------------EISDTRRRDPEGRMPSFSPA 146
++K++R+ T A I V + IPG +ER+I E ++T+ D G M A
Sbjct: 64 VVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPHCFA 123
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
Q+AL IHD+I+ + G EE+ E + V R++V VGCL
Sbjct: 124 QDALLKIHDKIVADEIHDGVAHEEKSE--------------SADDVTARILVQGNQVGCL 169
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
LGKGG II+Q+R +T IR+LP + LP+C S+E+VQ+ G + V+ A+ IS+RL
Sbjct: 170 LGKGGSIIQQLRSDTGAGIRVLPSE-DLPQCALKSDELVQISGAPSLVRKALYEISTRLH 228
Query: 267 ESQHRD--------RSHFHGRLHSPDRFFPDDDYVPHM--NNTARRPSMDGARFSGSNYR 316
+ ++ + + SP ++ +PH+ ++ P +D R SG Y
Sbjct: 229 QHPRKENRPLEEIINASTQRKRESPILLQHENPMLPHLHSDHPPPIPLLDPYR-SGLQYH 287
Query: 317 SNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
E+ R+LC + +G VIG+S V+ ++ +
Sbjct: 288 VTET-------------------------EEFSIRILCASELIGSVIGKSGANVKRVEQQ 322
Query: 377 IGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
G +KV + D S E +I +SS+E P + + PA EAL+ + ++ + + +TR
Sbjct: 323 TGARIKVQEIDKDASGESLIIVSSKEVPSEPISPAIEALILLHDKVSAPSEKRHS--STR 380
Query: 436 LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
L+VPSS++GC+ G G ++EMRR TGA I++ S+ + P +S DELVQ G+I D
Sbjct: 381 LVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHGRED 440
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 29/189 (15%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--------- 397
+ ++R+LCP+ K+G V+G +V+ L+ E ++VADP+ G+DE++I I
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPEL 101
Query: 398 ---SSEEGPDDEL------FPAQEALLHIQTRIV----------DLGADKDNIITTRLLV 438
++E D L AQ+ALL I +IV + ++ + +T R+LV
Sbjct: 102 TDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILV 161
Query: 439 PSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALV 497
+++GCL G+ GS + ++R TGA I++L E++P C +DELVQI G R AL
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALY 221
Query: 498 EVTTRLRSY 506
E++TRL +
Sbjct: 222 EISTRLHQH 230
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT E+ + A
Sbjct: 452 STIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLEEAKAA 511
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 512 QSLLQGFI 519
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 250/502 (49%), Gaps = 79/502 (15%)
Query: 60 NNSNNRAN-SNPKDPSLMVTT---TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH 115
N S+ RA S P L + +R+LC+ + GGVIGKSG++IK+++ TGA I +
Sbjct: 25 NGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIE 84
Query: 116 ELIPGDEERIIEISDT---------RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF 166
+ +R+I + R +G S AQEAL + DRILE
Sbjct: 85 DSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILE------V 138
Query: 167 YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
E E G G V+ R+V G ++GKGGK++E+++ +T +I
Sbjct: 139 AAEME------------GIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIW 186
Query: 227 ILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR------- 279
+ +D+ LP C+S +E++++ G +++VK A+ +S L++ H DR+ G+
Sbjct: 187 VC-KDN-LPACISSPDEVIEIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIH 244
Query: 280 ------------LHSPDRFF---PDDDY--VP-------HMNNTARRPSMDGARFSGSNY 315
+ P F P + VP H+++ +R S S SN
Sbjct: 245 HEALVGVPRETLMSVPRETFIGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNS 304
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
+ +S+ A +S + +++ F+++C D++G VIG+ I+ LQ+
Sbjct: 305 YATGV------HSLSAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQS 358
Query: 376 EIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK------- 428
E G + V V ++++ITI++ E P+ PAQ+A + + +R V+ G +K
Sbjct: 359 ETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLN 418
Query: 429 -DNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIV 486
+ +T +L+V S+++GCL G+ G + SEMR++TGA+I+I+ ++V C S D++VQI
Sbjct: 419 TGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQIS 478
Query: 487 GEIQAARDALVEVTTRLRSYLY 508
GE +DAL T RLR L+
Sbjct: 479 GEFSNVQDALYNATGRLRDNLF 500
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 22/210 (10%)
Query: 322 PRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDL 381
P P+G S A + P + FR+LC ++G VIG+S +++ LQ G +
Sbjct: 22 PFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKI 81
Query: 382 KVADPVDGSDEQIITI--------------SSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
++ D + S +++I + S +G E+ AQEALL + RI+++ A+
Sbjct: 82 RIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAE 141
Query: 428 KDNI------ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTD 480
+ I ++ RL+ S++ G + G+ G + E +++ TG I + ++ +PAC+S D
Sbjct: 142 MEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPD 200
Query: 481 ELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
E+++I G + + + ALV V+ L+ + D
Sbjct: 201 EVIEIEGSVSSVKKALVAVSRNLQDRHHAD 230
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+VT +T+E+V+P+ + + ++ + L R ++SGA V + E +P + + I +SG+P++
Sbjct: 690 IVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDE 749
Query: 660 VERAQSVLQGFIL 672
+ AQS+LQ FIL
Sbjct: 750 TQAAQSLLQAFIL 762
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 178/687 (25%), Positives = 307/687 (44%), Gaps = 100/687 (14%)
Query: 14 HQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDP 73
+DYDGDT NN RH+ N + + ++
Sbjct: 11 QRDYDGDT--------------NNQKRHKDNKGTDNDELV-------------------- 36
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----- 128
YRILC D G VIGKSG +I SIR + A + V + PG R+I I
Sbjct: 37 ------VYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVK 90
Query: 129 --SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
D D + PAQ+AL +H I + G+ ++
Sbjct: 91 EKGDADVDDDFHQADPLCPAQDALLKVHAAISNAVAA---LGDSDKRCR----------- 136
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMSEEI 244
++ +++V ++GK G I+++R +T+ I+I +D S P C +
Sbjct: 137 ---DKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNF 193
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR---------------LHSPDRFFPD 289
+ + G+ VK A+ +S+ + + ++ ++ P F+P+
Sbjct: 194 LLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSIIISSDVPIYQPGGFYPN 253
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLV 349
D P +++ + P + YG S + I + P+ S +L+
Sbjct: 254 AD--PIVSSRSVPPILGATHIP----EFQGYGDMRSSWPIYSSTVPVVPSFGNTSRSELI 307
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
R+LCP DK+GRVIG+ ++ ++ G ++V D DE IIT+ + E PDD
Sbjct: 308 IRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDLKSM 367
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILS 468
A EA+L +Q +I D + ++I+ R LVPS IGC+ G+ G++ +E+R+ T A++ I S
Sbjct: 368 AVEAILLLQGKIND---EDNDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCI-S 423
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSAL 528
+ + C DELV++ GE+ + RDALV++ RLR + + +K+ +S+ T S
Sbjct: 424 KVDKLKCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLK---EKDGGLNSSVGTDSVY 480
Query: 529 VVEAASPI-DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERRE 587
V A I I P+ V V P Q + + ++ ++ E+
Sbjct: 481 PVHAGISIPSILPS--VPPVA--PMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGS 536
Query: 588 DVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGT 647
++++ L STLE+++P AV K+I K + ++SGA + + + +
Sbjct: 537 LASYSLSKLYEGLPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARG 596
Query: 648 QKIIQISGTPEQVERAQSVLQGFILST 674
+I ISG PEQ + A++++Q FI++T
Sbjct: 597 DRIAYISGKPEQKQAAENLIQAFIMAT 623
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 252/496 (50%), Gaps = 49/496 (9%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNRANSNPKDP--SLMVT---TTYRILCHDMKAGGVIGKS 97
GN ++++N +++N + NN N++ P + +T T YR LC K G +IG+
Sbjct: 9 GNKRSHSHNSVDDNRT-NNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRG 67
Query: 98 GSIIKSIRQHTGAWINVHELIPGDEERIIEISDT--RRRDPEGRMPSFSPAQEALFLIHD 155
G I+K +R T A I + E +PG +ER++ + D E PA +AL IH
Sbjct: 68 GEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQ 127
Query: 156 RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIE 215
+++ D G E+E+ GG+ V +++V+ +GC++GKGG+I++
Sbjct: 128 KVIAED----LRGVEDEDVDMEK-------VDGGDLVTAKLLVASDQIGCVIGKGGQIVQ 176
Query: 216 QMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE----SQHR 271
+R ET QIRIL +D LP C S+E+VQ+ G+I VK A+ +++RL + +QH
Sbjct: 177 NIRSETGAQIRIL-KDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHL 235
Query: 272 DRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY-RSNNYGPRPSGYSIE 330
S G + P M G + +Y RS G R G
Sbjct: 236 LTSAVPGVYAASGSMVGSHGGAPIMGMAPIGGGYGGYKGDVVDYPRSMYPGSRDEG---- 291
Query: 331 AGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGS 390
SV+ F R +CP +G VIG+ GI+ ++ + G ++KV
Sbjct: 292 --------SVKEFS-----VRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEG 338
Query: 391 DEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEG 448
D+ +I IS+ E +D EA + +Q R + I+ T+RLLV SS IGCL G
Sbjct: 339 DDCLIAISARELFEDPFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIG 398
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ GS+ +EMRR T ANI+ILS+E++P + DE+VQI GE+ A+DAL++V TRLR+ L
Sbjct: 399 KGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANL 458
Query: 508 YRDFFQKETPPSSTGP 523
F KE SS P
Sbjct: 459 ----FDKERSVSSLLP 470
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 259/489 (52%), Gaps = 62/489 (12%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMV---TTTYRILCHDMKAGGVIGKSGS 99
G + N++ +++ S N R NP D + T YR LC K G +IG+ G
Sbjct: 3 GPGHRNSHGKRHSDYSENGGGKR--RNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGE 60
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR-----DPEGRMPSFSPAQEALFLIH 154
I K +R T A I + E +PG +ER+I I + R D E ++ PAQ+ALF +H
Sbjct: 61 IAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKV---CPAQDALFRVH 117
Query: 155 DRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKII 214
++++ DG G EE EE G +V R++V +GC++GKGG II
Sbjct: 118 EKLIADDGPGD---EENEE--------------GLAQVTVRLLVPSDQIGCIIGKGGHII 160
Query: 215 EQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRS 274
+ +R +T +QIR+L + LP C +E++Q+ GD V+ A+ +SSRL ++ R +
Sbjct: 161 QGIRSDTGSQIRVLSNER-LPACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQ- 218
Query: 275 HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG-----ARFSGSNYRSNNYGPRPSGYSI 329
L +P P V N ++ + G + + G Y+ + G PS Y
Sbjct: 219 ----HLQAPSLMQPYP--VGSRNGSSSTAPVVGIAPMVSPYGG--YKGDMVGDWPSIYQ- 269
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
P + +D R+LC VG VIG+ GI++ ++ E G +KV D
Sbjct: 270 -----PRREDSS---AKDFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKV-DSSSA 320
Query: 390 SDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN--IITTRLLVPSSEIGCLE 447
D+ IIT+S++E +D + P +A + +Q + + + TTRLLV +S+IGCL
Sbjct: 321 EDDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEKTDPESGEPSYTTRLLVSTSQIGCLI 380
Query: 448 GRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ GS+ +E+RR++ ANI+ILS+E VP S +E+VQI G+++ AR ALV++TTRL++
Sbjct: 381 GKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGDLEVARHALVQITTRLKA- 439
Query: 507 LYRDFFQKE 515
+FF++E
Sbjct: 440 ---NFFERE 445
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 294/636 (46%), Gaps = 81/636 (12%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD 121
+ NR++ P L +R++CH GG+IG SGSI+ +R+ TG I+ + +
Sbjct: 24 TTNRSSKRPVFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSA 83
Query: 122 EERIIEI--SDTRRRD---PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
E+R+I + S + R+ +G S AQEA+ + +R+ + + G
Sbjct: 84 EDRVILVIGSLSPRKGLLLGDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSN------- 136
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
R V ++++ +G ++GKGGK I +R T +IR+ P P+
Sbjct: 137 ---------RAVNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPP----PQ 183
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRES---QHRDRSHFHGRLHSPDRFF--PDDD 291
C + EE+VQ+ G I VK A+ +S L++ + + S DR P+ +
Sbjct: 184 CATKDEELVQITGGILAVKKALISVSHCLQDCPPLCKVPVTSSTPTVSSSDRLSSDPNAE 243
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
PH+N+ SM+G SN R S GA ++VFR
Sbjct: 244 LFPHLNSLL--TSMEGLSIYERTTNSNETSNRDS-----KGAE-----------HEVVFR 285
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
+LC + G VIG+ IV L+++ G + A P+ E+I+TIS+ E + PAQ
Sbjct: 286 LLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQ 345
Query: 412 EALLHIQTRIVD--LG------ADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
+A++ + RI++ +G + ++ +T RLLV +S + C G +G +SE+R TGA
Sbjct: 346 DAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQVISELREVTGA 405
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
+IQIL E VP S D +VQI GE + ++AL ++T+R+R L + E P S
Sbjct: 406 DIQILHGESVPNGASDEDVVVQITGEYRCVQNALYKITSRIRDNLSPNEVVAEARPKSNW 465
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNE 582
PI P A +S P AG +ET+ QN
Sbjct: 466 KVNK-------DPIK-----------GKPFARGKSAFPSGRFLPRN--AGVHAETILQN- 504
Query: 583 SERREDVPTVINR---VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSL 639
E D+ + R VT +T+E+++ ++ + + L R ++SGA V++
Sbjct: 505 GELHTDLSENLERGRGNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTV 564
Query: 640 VEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQ 675
+ + + ISGTP+Q AQS+LQ FI + Q
Sbjct: 565 YDPSVGTSGGKVVISGTPDQTFAAQSLLQAFIQTGQ 600
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 180/655 (27%), Positives = 299/655 (45%), Gaps = 120/655 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
YRILC D G VIGK+G +I SIRQ T A + V + PG ++R+I + RD
Sbjct: 39 VVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLT 98
Query: 138 GRMPS---------FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
R AQ AL +HD I+E+ +EE
Sbjct: 99 HRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDDEE----------------- 141
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS--LPRCVSMSEEIVQ 246
++V ++GK G +I+++R +K+ I++ P+D S C + VQ
Sbjct: 142 -----ANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQ 196
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
+ GD VK A+ +S+ + +S ++ P + V + + PS +
Sbjct: 197 ITGDARAVKKALFAVSAIIYKSPSKE-------------IIPLETSVQELPPSIIIPS-E 242
Query: 307 GARFSGSNYRSNNYGPRPSG------------------YSIEA---GAAPMSDSVQPFY- 344
+ SN+ S + G PSG +++ A G P+ S+ P
Sbjct: 243 LPVYPASNFYSLSDGAMPSGHPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSMVPAIP 302
Query: 345 -------GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
DL+ R++CP DK+G VIG+ ++ ++ E G ++ V D + +E IIT+
Sbjct: 303 TYSTPKGSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITV 362
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEM 456
+S E DD A EA+L +Q +I D D+ +I RLLVP + IGCL G+ GS+ ++M
Sbjct: 363 TSTEATDDVKSAAVEAVLLLQAKINDGIEDRMHI---RLLVPGNVIGCLIGKGGSIVNDM 419
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
R + A I I S+ P S +DELV++ GE+ RDALV++ RLR + +D +++
Sbjct: 420 RNKSKAIIHI-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVERQN 478
Query: 517 -------------PPSSTGPTGSALV--VEAASPIDITPAREVQTVTD--PPAATHQSVQ 559
P S+ + AL+ SP+ EV+ D P +++++
Sbjct: 479 SDKDGKRTIAITEPMYSSNFSMPALLPSTRQVSPLSYDQRGEVERGLDVYPRSSSYRYSS 538
Query: 560 IPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLI 619
+ A + G+ S ++ RR D+ E+++P + K+I
Sbjct: 539 LQAVD----DGYGAHSSYTSKSYGGRRPDI-----------------EMIIPASGLSKVI 577
Query: 620 TKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
K T L ++SGA + ++E + + ISGTPEQ + A+++++ FI+ST
Sbjct: 578 GKRGTNLDNIRKISGADIEIIESKSSRHDHVAHISGTPEQRQSAENLIRAFIMST 632
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
E +V+R+LCP +G VIG++ ++ ++ + +KV DP G+D+++I + D
Sbjct: 37 ELVVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRD 96
Query: 406 ---------------ELFPAQEALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLE 447
+ AQ ALL + IV+ + +D D+ +LVP+S+ +
Sbjct: 97 LTHRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDD-EEANILVPASQAASVI 155
Query: 448 GRDGS-LSEMRRSTGANIQILSR---EEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
G+ GS + +R + ++I++ + E +C D VQI G+ +A + AL V+ +
Sbjct: 156 GKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKALFAVSAII 215
Query: 504 RSYLYRDFFQKET-----PPSSTGPT 524
++ ET PPS P+
Sbjct: 216 YKSPSKEIIPLETSVQELPPSIIIPS 241
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 273/573 (47%), Gaps = 87/573 (15%)
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
++ +PE +PS A +A+ L+ DRI + G G
Sbjct: 199 VAKVAESEPERVIPS---ALKAISLVFDRI----------------FAAGDNNETGNASA 239
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
V+ R++V G LLGKGG +I+QM + +IR+L RD+ LP C +++++ Q+
Sbjct: 240 ASTPVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVL-RDN-LPSCALLNDKLCQI 297
Query: 248 VGDINNVKNAVAIISSRLRESQHRD---RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
G+I++V+ + +S L ++ S H S F D +P
Sbjct: 298 TGEIDSVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGLP---------- 347
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG------EDLVFRMLCPIDK 358
S +SN + P G S G + D P +G E L FRMLCP DK
Sbjct: 348 --------SGMQSNFHIPL-QGPSQANGPFDIIDLQPPIHGHASVPIESLSFRMLCPQDK 398
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
VG +IG+ IV+ +Q + G ++KV D V S+++II+IS P D + PAQ A+LH+Q
Sbjct: 399 VGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQ 458
Query: 419 TRIVDLGAD-KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
+I+ +D K+ RL+V ++++GC+ G+ GS ++EMR+ +GA I +LS++++P V
Sbjct: 459 RKIMLPTSDKKEGPAICRLIVSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGV 518
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI 536
DE+VQI G +A ++AL+++T RLR++L+R P+ P G
Sbjct: 519 PEHDEVVQISGSCEAIQEALMQITARLRNHLFRVDRMPAMGPNMRPPFGL---------- 568
Query: 537 DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG-SVSETVKQNESERREDVPTVINR 595
+ + P A H+S + + G S TVK R P I+
Sbjct: 569 -------LDSQFGPFAGNHESPSLFHKDFMGRPLDGISAPWTVK---GMRDLSDPLSISD 618
Query: 596 VP---------------LPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+P ++ T EV++P +P L ++ L R E S A +++
Sbjct: 619 IPGAGHREAGGFSGPGQPSMMPNLTAEVLVPRLIIPALCSEDGGCLDRIREFSEAKITVA 678
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
E + + ISGTP+Q+ A+S++Q F++S
Sbjct: 679 EPIADAMDIPVLISGTPDQMHAARSLVQAFVMS 711
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
+RILC K+G VIGK G+II IR+ T I V PG +ER+I I+
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFIT 95
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
G ++ + P S + IE G PF FR+LCP K G VIG+ I+
Sbjct: 23 GKWQKTKHSSPHKSQFKIEPGV--------PF------FRILCPASKSGNVIGKGGAIIA 68
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISS 399
++ E + ++V G DE++I I++
Sbjct: 69 KIREETRMRIRVDRAAPGCDERVIFITA 96
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 178/324 (54%), Gaps = 29/324 (8%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V RM+ + VGC+LGKGGK +E+MR E+ QIR+ +P C +E++ + G
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 252 NNVKNAVAIISSRLRESQHRDRSHF-HGRLHSPDRFFPDDDYV---PHMNNTARR---PS 304
+ + A+ ++S+ L+++ D S+F GR F P V P ++ ++R P
Sbjct: 170 SAARKALLLVSTCLQDNPRPDTSNFPSGR-----PFGPPGSGVGCPPGVDPHSQRSYLPP 224
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
+ N+ SN P P F +++VFRM+C D VG VIG
Sbjct: 225 PHVPDYHARNFSSNGAAPGPRF----------------FVEQEIVFRMICLNDMVGGVIG 268
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
+ + LQ+E G +KV DPV SDE+II IS+ E + P+Q+ALL + ++I +
Sbjct: 269 KGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEA 328
Query: 425 GADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELV 483
DK + + RLLVP+ IGCL G+ GS ++EMR+ TGA+I+I E++P C DELV
Sbjct: 329 SMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELV 388
Query: 484 QIVGEIQAARDALVEVTTRLRSYL 507
Q+ G Q+ +DAL+ +T R+R +
Sbjct: 389 QVTGSFQSIQDALLHITGRIRDLI 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 35/210 (16%)
Query: 60 NNSNNRANSNPKDPSLMVT--TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
N S+N A P+ V +R++C + GGVIGK GS I++++ TGA + V +
Sbjct: 234 NFSSNGAAPGPR---FFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDP 290
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
+ +ERII IS R R SP+Q+AL ++ +I E+
Sbjct: 291 VADSDERIIVIS-ARENSEMMR----SPSQDALLRVYSKISEAS---------------- 329
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
+ V R++V H+GCLLGKGG II +MR T IRI + +PRC
Sbjct: 330 --------MDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIF-GNEQIPRC 380
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
++E+VQV G ++++A+ I+ R+R+
Sbjct: 381 AQRNDELVQVTGSFQSIQDALLHITGRIRD 410
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
A P+ +A S+ +TV + R+ V + N+V P T T EVV+P + +
Sbjct: 514 APEAPATDAPRSMPDTVPAVDF-RKGPVSSSENQVATPATT--TTEVVIPCKYIGFVCGT 570
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ + L ++SGA++++ + +P T + I G PEQ ++AQS++ FI
Sbjct: 571 NGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAFIFC 622
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 239/447 (53%), Gaps = 51/447 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E +PG +ER+I I + R
Sbjct: 40 TVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTV 99
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H++++ DG G EE EE G +V
Sbjct: 100 EDTEDKV---CPAQDALFRVHEKLITDDGPGD---EENEE--------------GLAQVI 139
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC++GKGG II+ +R +T + IR+L +H LP C +E++Q+ GD
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEH-LPACAISGDELLQISGDPLV 198
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG- 312
V+ A+ +SSRL ++ R + L P +P +++ P + A
Sbjct: 199 VRKALLQVSSRLHDNPSRSQHLLASSLTQP---YPVGS---RHGSSSTTPVVGIAPMVNP 252
Query: 313 -SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
Y+ + G PS Y P + ++ R+LC VG VIG+ GI++
Sbjct: 253 YGGYKGDMVGDWPSIYQ------PRREESS---AKEFSLRLLCAASDVGGVIGKGGGIIK 303
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN- 430
++ E G +KV D D+ IIT+S++E +D + P +A + +Q R + +
Sbjct: 304 QIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSEKTDPESGE 362
Query: 431 -IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGE 488
TTRLLV +S IGCL G+ GS+ +E+RR++ ANI+ILS+E VP S +E+VQI G+
Sbjct: 363 PSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGD 422
Query: 489 IQAARDALVEVTTRLRSYLYRDFFQKE 515
+ A+ ALV++TTRL++ +FF++E
Sbjct: 423 LDVAKHALVQITTRLKA----NFFERE 445
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 19/204 (9%)
Query: 318 NNYGPRPSGYSIEAGAA---PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
N++G R S Y+ G P D+ P +D V+R LC K+G +IG I + L+
Sbjct: 8 NSHGKRYSDYAENGGGKRRNPGDDTYAPC-PDDTVYRYLCASRKIGSIIGRGGEIAKQLR 66
Query: 375 NEIGVDLKVADPVDGSDEQIITISSE-------EGPDDELFPAQEALLHIQTRIV--DLG 425
+ +++ + V G DE++ITI S E +D++ PAQ+AL + +++ D
Sbjct: 67 TDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEKLITDDGP 126
Query: 426 ADKDN-----IITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGT 479
D++N + RLLVPS +IGC+ G+ G + + +R TG++I++LS E +PAC
Sbjct: 127 GDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISG 186
Query: 480 DELVQIVGEIQAARDALVEVTTRL 503
DEL+QI G+ R AL++V++RL
Sbjct: 187 DELLQISGDPLVVRKALLQVSSRL 210
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 246/497 (49%), Gaps = 62/497 (12%)
Query: 29 YNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDM 88
Y+ + N+ R N+++ +++ + + +S P + T YRILC
Sbjct: 3 YDKSRRSNSKKRRHSNSDDGKRKRLSSR----HDDTSMSSEP------IETIYRILCPAK 52
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------------EISDTRRRD 135
K G V+G+ G I+K++R+ T A I V + IPG +ER+I E ++ + D
Sbjct: 53 KIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISD 112
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G M AQ+AL IHD+I+ + Y E + + V R
Sbjct: 113 GLGNMKPHCFAQDALLKIHDKIVADE----IYDEVAHDE-------------SSDDVTAR 155
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V VGCLLGKGG II+Q+R +T IR+L ++ LP+C S+E+VQ+ G + V+
Sbjct: 156 ILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSEN-LPQCALQSDELVQISGAPSLVR 214
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A+ IS+RL + ++ + + + + + H N M S
Sbjct: 215 KALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHEN------PMLPHLHSHHPP 268
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
P SG P+S++ E+ R+LC + +G VIG+S V ++
Sbjct: 269 PIPLLDPYRSGPQY-----PVSET------EEFSIRILCASELIGSVIGKSGANVRRVEQ 317
Query: 376 EIGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITT 434
+ G +KV + D S E++I +SS E P + + P EAL+ + ++ + + + +T
Sbjct: 318 QTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVS--ASSEKHHSST 375
Query: 435 RLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
RL+VPS+++GC+ G G ++EMRR TGA I++ S+ + P +S DELVQ+ G AR
Sbjct: 376 RLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIAR 435
Query: 494 DALVEVTTRLRSYLYRD 510
AL E+ +RLR+ RD
Sbjct: 436 GALTEIASRLRTRTLRD 452
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 37/200 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEISDTRRRDPEG 138
+ RILC G VIGKSG+ ++ + Q TGA I V E+ ER+I +S
Sbjct: 291 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE------ 344
Query: 139 RMPS--FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+P+ SP EAL L+HD++ S E+ + +TR+
Sbjct: 345 -IPTEPISPTIEALILLHDKVSASS---------EKHHS-----------------STRL 377
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
VV VGC+LG+GG++I +MR T +IR+ + P+ +S +E+VQV G +
Sbjct: 378 VVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK-PKYLSFGDELVQVAGPPAIARG 436
Query: 257 AVAIISSRLRESQHRDRSHF 276
A+ I+SRLR RD S +
Sbjct: 437 ALTEIASRLRTRTLRDTSCW 456
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 268/559 (47%), Gaps = 91/559 (16%)
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
A +A+ L+ DRI F E E G G G N V+ R++V VG
Sbjct: 245 AVKAILLVFDRI--------FVNEMEN--------GTGDASGERNHVSLRLLVLDSQVGW 288
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
LLGK G +I+QM ++ +IR+ LP C +E+ Q+ G++++V+ + ++ L
Sbjct: 289 LLGKNGSVIKQMSTDSCCEIRV--SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL 346
Query: 266 RESQHRDR----SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS-NNY 320
++ +H G S FF D +P +P++ F G N N+
Sbjct: 347 FTHPPKESDVLGAHNSGSSRS---FFNQPDVLP----PGMQPNLH-LPFQGPNVAHLPNF 398
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
P G+ P E L FR+LC DKVG +IG+ ++ +QN+ G +
Sbjct: 399 ---PEALMHGHGSVP---------PEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCE 446
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPS 440
+KV D V S+++I+ IS P D + PAQ A+LH+Q +IV K+ RL+V
Sbjct: 447 IKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSP 506
Query: 441 SEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+++GCL G+ GS ++EMR+ +GA+I +LS++++P V DE+VQI G +A ++AL+++
Sbjct: 507 NQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQI 566
Query: 500 TTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPP----AATH 555
T RLR++L+RD T P+ P G + DP A H
Sbjct: 567 TARLRNHLFRDRM-ASTVPNVQPPFG---------------------LVDPQFGSYAGNH 604
Query: 556 QSVQ---IPATSQPSKEAAG------SVSETVKQ----NESERREDVPTVINR----VPL 598
S+ P Q K+ G S T+K + D+P + +R P
Sbjct: 605 DSISPRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPG 664
Query: 599 P----LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQIS 654
P +V+ T +V++P +P L + L R E SGA +++ + I IS
Sbjct: 665 PGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILIS 724
Query: 655 GTPEQVERAQSVLQGFILS 673
GTP+Q+ A+S++Q F+LS
Sbjct: 725 GTPDQMHAARSLIQAFVLS 743
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 30/194 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+R+LC K GG+IGK G+ IKSI+ TG I V + +P E+RI+ IS P
Sbjct: 415 TFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFIS-----GPAHP 469
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SPAQ A+ + +I+ + G + R++VS
Sbjct: 470 GDGISPAQNAILHVQRKIVPT-----------SNTKEGPAI-------------CRLIVS 505
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGKGG II +MR + I +L +D +P+ V ++E+VQ+ G ++ A+
Sbjct: 506 PNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKD-KIPKGVPENDEVVQISGASEAIQEALM 564
Query: 260 IISSRLRESQHRDR 273
I++RLR RDR
Sbjct: 565 QITARLRNHLFRDR 578
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 71 KDPSLMV---TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
+ P L+V +RILC K+G VIGK G II IRQ TG I V E++PG +ER+I
Sbjct: 77 QQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIV 136
Query: 128 IS 129
I+
Sbjct: 137 IT 138
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS 399
+FR+LCP K G VIG+ GI+ ++ E GV ++V + V G DE++I I++
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 233/460 (50%), Gaps = 55/460 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--SDTRRRDP 136
++R+LCH + GGVIGK+G+IIK ++Q TGA + + + +R+I + T+
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVV 95
Query: 137 EGRMPS---FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
R+ S S QEAL + +RILE E + G V+
Sbjct: 96 FSRIESAVEVSKGQEALVRVFERILE-------VAAESDSVADG-------------VVS 135
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
RM+ VG ++GKGGK++E++R + +I++L LP C + +EE++++ GD++
Sbjct: 136 CRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVL--VDKLPDCAASNEEMIEIEGDVSA 193
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGR--LHSPDRFFPDDDYVP-HMNNTARRPSM----- 305
VK + +S L++ Q D++ + R D V H ++A P++
Sbjct: 194 VKKGLVAVSRCLQDCQPVDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSS 253
Query: 306 -------DGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDK 358
S NY R S+E+ D+ P + LVFR+LC D+
Sbjct: 254 VLPTIPQHSLGLPTIPKSSINYASRVHPLSLESDRVVTPDTNIP---QQLVFRILCTTDR 310
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
+G VIG+ IV LQNE G + V V DE++IT+++ E P+ AQ+ ++ +
Sbjct: 311 IGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVF 370
Query: 419 TRIV--------DLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSR 469
+R V D G+ + + +T RL+V S++GCL G+ G+ +SEMR++T +I+I+
Sbjct: 371 SRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVG 430
Query: 470 EEV-PACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
++ P CV TD +V+I G+ +DA+ VT RLR L+
Sbjct: 431 DQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNLF 470
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 27/204 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+RILC + GGVIGK G+I+++++ TGA I+V + +ER+I + T +PE R
Sbjct: 301 VFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITV--TASENPESR 358
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+S AQ+ + L+ R +ES G G+ G RG + V R+VVS
Sbjct: 359 ---YSAAQKTIVLVFSRAVES--------------GIEKGLDPGSSRG--SPVTARLVVS 399
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGKGG II +MR T T IRI+ D P+CV ++ +V++ GD NVK+A+
Sbjct: 400 PSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIY 459
Query: 260 IISSRLRESQHRDRSHFHGRLHSP 283
++ RLR++ F G L +P
Sbjct: 460 HVTGRLRDNL------FSGMLSTP 477
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 35/212 (16%)
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
S +N RS P+PS A AAP+ P + FR+LC ++G VIG++ I+
Sbjct: 12 SSANKRSK---PQPS-----ASAAPL-----PVPSGHVSFRLLCHASRIGGVIGKAGNII 58
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD-------------ELFPAQEALLHI 417
+ LQ + G +++ D S +++IT+ GP E+ QEAL+ +
Sbjct: 59 KGLQQQTGAKVRIEDAPSDSPDRVITVI---GPITQSAVVFSRIESAVEVSKGQEALVRV 115
Query: 418 QTRIVDLGADKDN----IITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEV 472
RI+++ A+ D+ +++ R+L S +G + G+ G + E +R+ G I++L +++
Sbjct: 116 FERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVLV-DKL 174
Query: 473 PACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
P C + +E+++I G++ A + LV V+ L+
Sbjct: 175 PDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQ 206
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
VT +T+E+V+P+ A + ++ + L R ++SGA V + E + + +I+ ISGTP++
Sbjct: 646 FVTNTTVEIVVPENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVISGTPDE 705
Query: 660 VERAQSVLQGFILSTQ 675
+ AQS+LQ FIL+ Q
Sbjct: 706 TQAAQSLLQAFILTGQ 721
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 240/446 (53%), Gaps = 49/446 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E +P +ER+I I + R
Sbjct: 40 TVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTI 99
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H+++ DG E EE G +V
Sbjct: 100 EDTEDKV---CPAQDALFRVHEKLATDDGP--VNKENEESLG---------------QVT 139
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC++GKGG II+ +R +T +QIR+L +H LP C + +E++ + GD
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEH-LPLCATSGDELLLITGDPMV 198
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
V+ A+ +SSRL + R + L+ P FP + ++TA +
Sbjct: 199 VRKALLQVSSRLHGNPSRSQHLLASSLNQP---FPVGSRL-GSSSTAPVVGITPMVSPYG 254
Query: 314 NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELL 373
Y+ + G PS Y P + P ++ R+LC VG VIG+ GI++ +
Sbjct: 255 RYKGDMVGDWPSIYQ------PRREVSSP---KEFSLRLLCAAANVGGVIGKGGGIIKQI 305
Query: 374 QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRI---VDLGADKDN 430
+ E G +KV D D+ IIT+S++E +D + P +A + +Q R +D + + +
Sbjct: 306 RQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPRCSEKIDAESGEPS 364
Query: 431 IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
TTRLLV +S IGCL G+ GS+ +E+RR++ ANI+I+S+++VP S +E+V I G++
Sbjct: 365 Y-TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDEEMVLISGDL 423
Query: 490 QAARDALVEVTTRLRSYLYRDFFQKE 515
AR AL+++TTRL++ +FF++E
Sbjct: 424 DFARHALLQITTRLKA----NFFERE 445
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 232/479 (48%), Gaps = 73/479 (15%)
Query: 42 RGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSG 98
R N+ T++ S + R N+ D S+ + T YRILC K G V+G+ G
Sbjct: 8 RSNSKKRTHS-----NSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGG 62
Query: 99 SIIKSIRQHTGAWINVHELIPGDEERII-------------EISDTRRRDPEGRMPSFSP 145
I+K++R+ T A I V + IPG +ER+I E ++ + D G S
Sbjct: 63 DIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCF 122
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
AQ+AL IHD+I+ + +E+ E + V R++V VGC
Sbjct: 123 AQDALLKIHDKIVSDEIHDEVANDEKSE--------------SADDVTARILVQGNQVGC 168
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
LLGKGG II+Q+R T IR+LP ++ LP+C S+E+VQ+ G + V+ A+ IS+RL
Sbjct: 169 LLGKGGSIIQQLRSNTGAGIRVLPSEN-LPQCALKSDELVQISGAPSLVRKALYEISTRL 227
Query: 266 RESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGA--RFSGSNYRSNNYGPR 323
H H P N +D + R S + Y
Sbjct: 228 ---------HQH----------------PRKENRPLEEIIDASTQRKRESPTLQHEYSML 262
Query: 324 PSGYSIEAGAAPMSDSVQ--PFY----GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
P +S P+ D + P Y E+ R+LC + +G VIG+S V ++ +
Sbjct: 263 PHLHSDHTPPIPLLDPYRSGPQYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQT 322
Query: 378 GVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRL 436
G +KV + D S E++I ISS E P + + PA EAL+ + ++ + + +TRL
Sbjct: 323 GARIKVQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHSSTRL 380
Query: 437 LVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
+VPSS++GC+ G G +++MRR TGA I++ S+ + P +S DELVQ G+I D
Sbjct: 381 VVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGRED 439
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 29/189 (15%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---SSEEGP 403
+ ++R+LCP+ K+G V+G IV+ L+ E ++VAD + G+DE++I I +E P
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 404 DDELFP---------------AQEALLHIQTRIV----------DLGADKDNIITTRLLV 438
DE AQ+ALL I +IV D ++ + +T R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 439 PSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALV 497
+++GCL G+ GS + ++R +TGA I++L E +P C +DELVQI G R AL
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 498 EVTTRLRSY 506
E++TRL +
Sbjct: 222 EISTRLHQH 230
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 29/248 (11%)
Query: 432 ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ R+L S IG + G+ G+ + + + TGA I++ +E+ SG ++ EI
Sbjct: 293 FSIRILCASELIGSVIGKSGANVRRVEQQTGARIKV---QEIDKDASGERLIIISSNEIP 349
Query: 491 A-----ARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
A A +AL+ L D K + PS + + LVV +S + +
Sbjct: 350 AEPISPAIEALI---------LLHD---KVSAPSEKHHSSTRLVV-PSSKVGCIIGEGGK 396
Query: 546 TVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTR-- 603
+TD T +++ + + K + + RED R P R
Sbjct: 397 VITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGREDY-----REPTSATGRFL 451
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 452 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 511
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 512 QSLLQGFI 519
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 184/634 (29%), Positives = 297/634 (46%), Gaps = 67/634 (10%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--SDTRRR 134
+ YRILC G VIGKSG +I IRQ T A I V + PG ER+I I S T ++
Sbjct: 41 LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKK 100
Query: 135 DP---EGRMPSFS----PAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
D E ++S AQ+AL +HD I+ S + + +
Sbjct: 101 DIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRD-------------- 146
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEIV 245
+ R++V ++GK G II+++R T+ ++++ +D S P C + IV
Sbjct: 147 --DIRECRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIV 204
Query: 246 QVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARRP 303
+ G+ +VK A+ +S+ + + R++ + P D + P
Sbjct: 205 LISGESESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSI--YPQGGLYP 262
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPM---SDSVQP----FYG----EDLVFRM 352
+ D G+N S+ G P GY E+ A PM S S P F G E LV ++
Sbjct: 263 NQDPIFQHGANV-SSFIGTLPQGYG-ESAANPMPVFSASALPVVHGFGGSSKSEKLVIKV 320
Query: 353 LCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQ 411
+C K+GRVIG+ ++ ++ G ++V D + D+ +IT+++ E PDD A
Sbjct: 321 ICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAV 380
Query: 412 EALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSRE 470
EA+L +Q +I D +K + +LLVPS IGC+ G+ GS+ SE+R+ T ANI I
Sbjct: 381 EAVLLLQEKINDEDEEK---VKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGN 437
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD--FFQKETPPS--------S 520
P C DELV+I GE+ RDAL+++ RLR + RD + PP+ S
Sbjct: 438 NKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPARSENNNFFS 497
Query: 521 TGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQ 580
+G + + L + ++ + V P + S+ +P++ + V
Sbjct: 498 SGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSM-LPSSGGLYGYGSFPVGNNSYG 556
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
++S ++ LP T T+EV +P AV K++ + L +SGA + +
Sbjct: 557 SKSSYSSNLYG-----GLPQST--TMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEIS 609
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
+ + +I ISGTPEQ A+++ Q FI+ST
Sbjct: 610 DSKNSHGGRIALISGTPEQKRTAENLFQAFIMST 643
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 240/448 (53%), Gaps = 53/448 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E + G +ER+I I + R
Sbjct: 40 TVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTL 99
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H+++ D G EE +E G +V
Sbjct: 100 VDAEDKV---CPAQDALFRVHEKLSIDDDIGN---EESDE--------------GLAQVT 139
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC++GKGG II+ +R +T IR+L + +LP C +E++Q+ GD
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVL-SNENLPACAISGDELLQISGDSTV 198
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
V+ A+ +SSRL ++ R + + P +P H+ +++ P + S
Sbjct: 199 VRKALLQVSSRLHDNPSRSQHLLASSMTQP---YPVGS---HLGSSSTAPVVGITPLISS 252
Query: 314 --NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
Y+ + G PS Y P + ++ R+LC VG VIG+ GI++
Sbjct: 253 YGGYKGDVAGDWPSIYQ------PRREESS---AKEFSLRLLCAASNVGGVIGKGGGIIK 303
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
++ E G +KV D + D+ IIT+S++E +D + P A +H+Q R + D ++
Sbjct: 304 QIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSE-KTDPESA 361
Query: 432 I---TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
I TTRLLV +S IGCL G+ GS+ +E+RR++ ANI+ILS+E VP + +E+VQI G
Sbjct: 362 IPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG 421
Query: 488 EIQAARDALVEVTTRLRSYLYRDFFQKE 515
++ R AL+++TTRL++ +FF++E
Sbjct: 422 DLDVVRHALLQITTRLKA----NFFERE 445
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 240/448 (53%), Gaps = 53/448 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IG+ G I K +R T A I + E + G +ER+I I + R
Sbjct: 40 TVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTL 99
Query: 135 -DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E ++ PAQ+ALF +H+++ D G EE +E G +V
Sbjct: 100 VDAEDKV---CPAQDALFRVHEKLSIDDDIGN---EESDE--------------GLAQVT 139
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R++V +GC++GKGG II+ +R +T IR+L + +LP C +E++Q+ GD
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVL-SNENLPACAISGDELLQISGDSTV 198
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
V+ A+ +SSRL ++ R + + P +P H+ +++ P + S
Sbjct: 199 VRKALLQVSSRLHDNPSRSQHLLASSMTQP---YPVGS---HLGSSSTAPVVGITPLISS 252
Query: 314 --NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
Y+ + G PS Y P + ++ R+LC VG VIG+ GI++
Sbjct: 253 YGGYKGDVAGDWPSIYQ------PRREESS---AKEFSLRLLCAASNVGGVIGKGGGIIK 303
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
++ E G +KV D + D+ IIT+S++E +D + P A +H+Q R + D ++
Sbjct: 304 QIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSE-KTDPESA 361
Query: 432 I---TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
I TTRLLV +S IGCL G+ GS+ +E+RR++ ANI+ILS+E VP + +E+VQI G
Sbjct: 362 IPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG 421
Query: 488 EIQAARDALVEVTTRLRSYLYRDFFQKE 515
++ R AL+++TTRL++ +FF++E
Sbjct: 422 DLDVVRHALLQITTRLKA----NFFERE 445
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 233/481 (48%), Gaps = 87/481 (18%)
Query: 68 SNPKDPSLMVTTT----YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDE 122
S K P+ T +R+LC + G +IGK GS+I+ ++ TG+ I V + IP E
Sbjct: 4 STSKRPATTATAAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSE 63
Query: 123 ERIIEI--SDTRRRDPEGRMPSFSP---------------------------AQEALFLI 153
ER++ I +++D S +P AQ AL +
Sbjct: 64 ERVVLIIAPSGKKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRV 123
Query: 154 HDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKI 213
+RI+ D G+E ++ G + RM+V V L+ KGGK+
Sbjct: 124 FERIVFGDDAATVDGDELDK--------------GESEGLCRMIVRGNQVDYLMSKGGKM 169
Query: 214 IEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR 273
I+++R ++ +RI D +P C + ++Q+ G ++VK A+ ++++ L+ES
Sbjct: 170 IQKIREDSGAIVRISSTDQ-IPPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQES----- 223
Query: 274 SHFHGRLHSPDRF-FPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAG 332
G + D FP Y P ++ P D P P+
Sbjct: 224 ----GAPPTWDECPFPQPGYPPEYHSMEYHPQWDH--------------PPPN------- 258
Query: 333 AAPMSDSVQPF----YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD 388
PM + V PF E++ FR+LCP DKVG +IG+ +V LQNE G +KV+DP
Sbjct: 259 --PMPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTH 316
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
S+E+II IS+ E + AQ+ ++ + RIV++G + + RLLV S IG L G
Sbjct: 317 DSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLG 376
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ G L SEMRR+TGA+I++ ++++ S DE+VQ++G ++ +DAL ++ RLR +
Sbjct: 377 KGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAM 436
Query: 508 Y 508
+
Sbjct: 437 F 437
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 162/382 (42%), Gaps = 88/382 (23%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+R+LC K G +IGK G+++++++ +GA I V + EERII IS R + E
Sbjct: 276 VAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVIS--ARENLER 333
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
R S AQ+ + +H+RI+E GF VA R++V
Sbjct: 334 R---HSLAQDGVMRVHNRIVEI-----------------------GFEPSAAVVA-RLLV 366
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
++G LLGKGG +I +MR T IR+ +D + + S +EIVQV+G++ V++A+
Sbjct: 367 HSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQAT-KYESQHDEIVQVIGNLKTVQDAL 425
Query: 259 AIISSRLRESQHRDRSHFHGRLH-----------------------------SPDRFFPD 289
I RLRE+ F GRL SPDR+
Sbjct: 426 FQILCRLREAM------FPGRLPFQGMGGPPPPFMGPYPEPPPPFGPRQYPASPDRYH-- 477
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNY----RSNNYGPRPSGYSIEAGAAP------MSDS 339
P P D R G + ++ P+P G P +
Sbjct: 478 SPVGPFHERHCHGPGFD--RPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALR 535
Query: 340 VQPFYGEDLVF-----RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
+P E+ V ++ P +G V GE+ + ++ G ++ V DP G+ E +
Sbjct: 536 NEPIGSENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGL 595
Query: 395 ITISSEEGPDDELFPAQEALLH 416
+ +S G D+ AQ +LLH
Sbjct: 596 VVVS---GTSDQAHFAQ-SLLH 613
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P++T + +E+V+P + + ++ + L ++SGA+V + + + T+ ++ +SGT +
Sbjct: 544 PVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSD 603
Query: 659 QVERAQSVLQGFILSTQ 675
Q AQS+L FIL Q
Sbjct: 604 QAHFAQSLLHAFILCGQ 620
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 254/525 (48%), Gaps = 72/525 (13%)
Query: 28 RYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHD 87
R ++ +P NN R S + ++S+ ++ S T YRILC
Sbjct: 5 RRKYFKKPGNNLFKR------------KGVSSSRKGKWSDSHGEECSGDGDTVYRILCPS 52
Query: 88 MKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE---------- 137
K GGVIGK G+I+K++R+ T + I V + + G +ER+I I + + P
Sbjct: 53 RKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPA 112
Query: 138 --GRMPSFSP---AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
G+ +F P AQ+AL +HDRI+E D GG +++ + N V
Sbjct: 113 GNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDND---------------NNVV 157
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
R++V VGC+LGK G +I+++R ET IR+LP DH LP C ++E+VQ+ G
Sbjct: 158 TARLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADH-LPSCAMDTDELVQISGKPA 216
Query: 253 NVKNAVAIISSRLRESQHRDR-----SHFHGR-LHSP-----DRFFPDDDYVPHMNNTAR 301
K A+ IS L ++ +D+ + GR H P + P + PH N+T
Sbjct: 217 VAKRALYEISILLHQNPRKDKLPSVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPH 276
Query: 302 R-PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVG 360
P M S + + P G+ E A + ++LC K+G
Sbjct: 277 SMPWMGEYGNHPSEFGPGGFNGVPPGHGREPSA-------------EFSMKILCSTGKIG 323
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTR 420
VIG+ V+++Q E G + V D S+E+ I +S+ EG + +A+L +Q +
Sbjct: 324 GVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDK 383
Query: 421 IVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGT 479
D + +I TRLLVPSS++GC+ G+ G ++EMRR A+I++ + + P C S
Sbjct: 384 TSDF--SEKGMIITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDD 441
Query: 480 DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT 524
+ELVQI G A+DAL E+ +RLR+ RD T P GP
Sbjct: 442 EELVQISGNYGVAKDALAEIASRLRARTLRD-ANAGTEPGPAGPV 485
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 235/459 (51%), Gaps = 60/459 (13%)
Query: 34 QPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGV 93
+PNN ++ +G N N++ + NS P D T YRILC K GGV
Sbjct: 12 RPNNQFKRKGVVGIKKGNWSNSS----REQSFGNSQPAD------TVYRILCPSRKIGGV 61
Query: 94 IGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------EISDTRRRD----PEGRMPS 142
IGK+G+I+KS+R+ T A I V + IPG EER+I +I+ T+ +D E + S
Sbjct: 62 IGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES 121
Query: 143 FSP---AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
P AQ+AL +HDRI+E D GG +++ E + + R++V
Sbjct: 122 MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE---------------NSTITARLLVP 166
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G N K A+
Sbjct: 167 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNVAKRALY 225
Query: 260 IISSRLRESQHRDR--SHF---HG--RLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG 312
+S+ L ++ +D+ S F +G HSP D + + + AR S+ G
Sbjct: 226 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM---P 282
Query: 313 SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGE---DLVFRMLCPIDKVGRVIGESEGI 369
S YG +PS G+ ++ GE + ++LC K+G VIG+
Sbjct: 283 STPWMGGYGDQPS----RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 338
Query: 370 VELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKD 429
V+ LQ E G + V D SDE++I S+ EG + +A+L +Q + + +
Sbjct: 339 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SEK 396
Query: 430 NIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQIL 467
ITTRLLVPSS++GC+ G+ G ++EMRR T A+I+++
Sbjct: 397 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 435
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 160/565 (28%), Positives = 252/565 (44%), Gaps = 101/565 (17%)
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
G EEEE G VG RM+ + VGC+LGKGGK +E+MR E QIR+
Sbjct: 97 GGEEEEREVTGAVG------------CRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRV 144
Query: 228 LPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF-----HGRLHS 282
LP +E++ + G + V+ A+ +S+ L+++ D + G S
Sbjct: 145 FRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGS 204
Query: 283 PDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP 342
P D PH + P + + NY SN P P
Sbjct: 205 GTGCPPGMD--PHSQRSYLPPHI--PDYHTRNYPSNAGPPGPRF---------------- 244
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
F+ +++VFRM+ + VG +IG+ + LQ+E G +K+ +PV SDE+++ I++ E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
D PAQ+A++ + +RI + D+ + RLLVPS IGCL G+ GS +SEMR+ TG
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITG 364
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF--------- 512
ANI+I E++P C DE+VQ+ G Q+ +DAL+ +T R+R +
Sbjct: 365 ANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYP 424
Query: 513 ----------QKETPPSSTGPTGSALVVEAASPIDITPAR--------EVQTVTDPPA-- 552
++E PP P+G P + P R E+ PP
Sbjct: 425 PVGNIPVHQSRQEQPPPHLHPSG------GMPPYPMHPFRPDAPMGHFEMGDHRPPPVHS 478
Query: 553 -------------ATHQSVQIPATSQPS-----KEAAGSVSETVKQNESER------RED 588
Q P QPS EA + SE V +N S+ R+
Sbjct: 479 MEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSE-VPRNMSDAVPATDFRKG 537
Query: 589 VPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ 648
+ N+V P T EV++P + + + + + +MSGAS+++ + +
Sbjct: 538 PVAIENQVATPT---GTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDAN 594
Query: 649 KIIQISGTPEQVERAQSVLQGFILS 673
+ I G PE+ ++AQS++ FI
Sbjct: 595 SKVVICGDPEETKKAQSLIHAFIFC 619
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 60 NNSNNRANSNPKDPSLMVT--TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
+ N +N+ P P +R++ + G +IGK GS I++++ TGA I + E
Sbjct: 229 HTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEP 288
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
+ +ER++ I+ D SPAQ+A+ ++ RI E+
Sbjct: 289 VADSDERVVAITARENSD-----MLHSPAQDAVVRVYSRISEAS---------------- 327
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
+ R++V H+GCLLGKGG II +MR T IRI + +PRC
Sbjct: 328 --------IDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIF-GNEQIPRC 378
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
++E+VQV G ++++A+ I+ R+R+
Sbjct: 379 AQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 169/621 (27%), Positives = 290/621 (46%), Gaps = 93/621 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII----EISDTRRRDP 136
+R++CH GG+IG SGSI+ +R+ TG I+ + + G ++R+I +SD +
Sbjct: 41 FRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGIVL 100
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
R S AQE + + DR+ +G E E +GG V ++
Sbjct: 101 GDREMEVSNAQEGVVRVFDRV---------WGLESE-------------KGGNGEVYGKL 138
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+ VG ++GKGGK I +R + + IR+ P P C + EE++ + G+ VK
Sbjct: 139 LAHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPA----PHCAAKDEELILITGESLAVKK 194
Query: 257 AVAIISSRLRESQHRDRSHFHG--RLHSPDRF--FPDDDYVPHMNNTARRPSMDGARFSG 312
A+ +S L++ + + ++S DR + +D PH+N + PSM+G +
Sbjct: 195 ALIYVSYCLQDCPPMGKVSLNTPPTINSSDRSTSYTHEDLFPHLN--SWLPSMEGLSIND 252
Query: 313 SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
++ ++ N S S +G A +VFR+LC + G VIG+ IV
Sbjct: 253 ASKQTTNANGNSSLDSKGSGHA-------------VVFRLLCSNNVAGSVIGKKGSIVRT 299
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD--------L 424
+ G + A P+ +E+I+TIS+ E + PAQ+A++ + TRI +
Sbjct: 300 FEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNGFQP 359
Query: 425 GADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELV 483
++ +T RLL+ +S + L G +G +SE+R+ +GA+IQ+L E +P S D +V
Sbjct: 360 ATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPNA-SDNDVVV 418
Query: 484 QIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPARE 543
QI G + +AL ++T+ +R P + L+ EA I P+
Sbjct: 419 QITGGYRCVENALRKITSIIRD----------------NPLTNELLAEA----KIKPSFP 458
Query: 544 VQTVT-DPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVP----- 597
+ T T + P P + A ++ V +N E +I V
Sbjct: 459 LNKDTVRSKFITRKKSSFPFARVPPQNAGVYQAKKVTENG----ESHTNLIENVEPGRGN 514
Query: 598 -LPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ--KIIQIS 654
+ VT +T+E+++ ++ + + L R ++SGA V++ + GT K++ IS
Sbjct: 515 IVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVV-IS 573
Query: 655 GTPEQVERAQSVLQGFILSTQ 675
GTP+Q AQS+LQ FI + Q
Sbjct: 574 GTPDQTFAAQSLLQAFIQTAQ 594
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 15/184 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII----TISSEEGP 403
+ FR++C VG +IG S IV L+ E G + D V G+D+++I ++S +G
Sbjct: 39 IAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGI 98
Query: 404 -----DDELFPAQEALLHIQTRIVDLGADK--DNIITTRLLVPSSEIGCLEGRDG-SLSE 455
+ E+ AQE ++ + R+ L ++K + + +LL SS++G + G+ G ++S
Sbjct: 99 VLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQVGAIVGKGGKNISN 158
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
+R ++G+NI++ P C + +EL+ I GE A + AL+ V+ L+
Sbjct: 159 IRNNSGSNIRVC---PAPHCAAKDEELILITGESLAVKKALIYVSYCLQDCPPMGKVSLN 215
Query: 516 TPPS 519
TPP+
Sbjct: 216 TPPT 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 45/376 (11%)
Query: 55 NNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV 114
N+ S +N NS+ +R+LC + AG VIGK GSI+++ TGA I
Sbjct: 251 NDASKQTTNANGNSSLDSKGSGHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVF 310
Query: 115 HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEY 174
+ EERI+ IS E S SPAQ+A+ L+ RI E GF E
Sbjct: 311 APPLGQYEERIVTISAF-----ENLESSNSPAQDAVILVFTRIAEDHIRNGFQPATAVE- 364
Query: 175 GGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
+ V R++++ + L G G++I ++R + I++L +
Sbjct: 365 ---------------SPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLL-HGEPI 408
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP-DDDYV 293
P S ++ +VQ+ G V+NA+ I+S +R++ + ++ FP + D V
Sbjct: 409 PNA-SDNDVVVQITGGYRCVENALRKITSIIRDNPLTNELLAEAKIKPS---FPLNKDTV 464
Query: 294 PHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP--MSDSVQPFYGE----- 346
T ++ S AR N G + E G + + ++V+P G
Sbjct: 465 RSKFITRKKSSFPFARVP-----PQNAGVYQAKKVTENGESHTNLIENVEPGRGNIVATV 519
Query: 347 -DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD-GSDEQIITISSEEGPD 404
+ ++ G V GE G ++ ++ G D+ V DP G+ + IS G
Sbjct: 520 TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVIS---GTP 576
Query: 405 DELFPAQEAL-LHIQT 419
D+ F AQ L IQT
Sbjct: 577 DQTFAAQSLLQAFIQT 592
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 98/461 (21%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
NNS R ++ P P +RI+C K V G GA I V +L+
Sbjct: 4 NNSKKRRHAPPAAPD----AVFRIVCPAAKTADVAAIGGD---------GAKILVEDLV- 49
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
G EER++ I S AQ AL + +R ++ EE +
Sbjct: 50 GAEERVVVIVGDE-----------SAAQVALIRVLERTMD---------EETKN------ 83
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ V+ ++V VGC+LG+GGKI+E++R ++ IR+LP+D
Sbjct: 84 ----------STVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLPKDQPP---PP 130
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+E +Q+ G+ VK AV +S+ L E+ N
Sbjct: 131 PGDEFIQITGNFGAVKKAVLSVSACLHEN----------------------------NYG 162
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
A +PS G +Y ++ R YS AG S + F E++VF++LC DKV
Sbjct: 163 AFKPS------GGGSYAPPDHHSR-GAYSESAG----HSSHRMFVEEEVVFKLLCRHDKV 211
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQT 419
G +IG+ +V LQNE G +++ + SDE+++ IS++E + + PAQEA++ +
Sbjct: 212 GSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHC 271
Query: 420 RIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSG 478
R+ ++G + + +LLV S ++GCL G+ G +SEMRR+TGA+I+I S+E++ +S
Sbjct: 272 RLTEIGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQI-KYISQ 330
Query: 479 TDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPS 519
+E+VQ++G +Q+ +DAL +T R+R + F TPP+
Sbjct: 331 NEEVVQVIGSLQSVQDALFHITNRIRETI----FPIRTPPN 367
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 256/554 (46%), Gaps = 107/554 (19%)
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
A +A+ L+ DRI F E E G G G N V+ R++V VG
Sbjct: 245 AVKAILLVFDRI--------FVNEMEN--------GTGDASGERNHVSLRLLVLDSQVGW 288
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
LLGK G +I+QM ++ +IR+ LP C +E+ Q+ G++++V+ + ++ L
Sbjct: 289 LLGKNGSVIKQMSTDSCCEIRV--SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL 346
Query: 266 RESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPS 325
++ P N A P+ A G
Sbjct: 347 FTHPPKESDVLGAHNSGP--------------NVAHLPNFPEALMHGHG----------- 381
Query: 326 GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD 385
SV P E L FR+LC DKVG +IG+ ++ +QN+ G ++KV D
Sbjct: 382 -------------SVPP---EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLD 425
Query: 386 PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGC 445
V S+++I+ IS P D + PAQ A+LH+Q +IV K+ RL+V +++GC
Sbjct: 426 TVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGC 485
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
L G+ GS ++EMR+ +GA+I +LS++++P V DE+VQI G +A ++AL+++T RLR
Sbjct: 486 LLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLR 545
Query: 505 SYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPP----AATHQSVQ- 559
++L+RD T P+ P G + DP A H S+
Sbjct: 546 NHLFRDRM-ASTVPNVQPPFG---------------------LVDPQFGSYAGNHDSISP 583
Query: 560 --IPATSQPSKEAAG------SVSETVKQ----NESERREDVPTVINR----VPLP---- 599
P Q K+ G S T+K + D+P + +R P P
Sbjct: 584 RIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPS 643
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+V+ T +V++P +P L + L R E SGA +++ + I ISGTP+Q
Sbjct: 644 IVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQ 703
Query: 660 VERAQSVLQGFILS 673
+ A+S++Q F+LS
Sbjct: 704 MHAARSLIQAFVLS 717
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 30/194 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+R+LC K GG+IGK G+ IKSI+ TG I V + +P E+RI+ IS P
Sbjct: 389 TFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFIS-----GPAHP 443
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SPAQ A+ + +I+ + G + R++VS
Sbjct: 444 GDGISPAQNAILHVQRKIVPT-----------SNTKEGPAI-------------CRLIVS 479
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGKGG II +MR + I +L +D +P+ V ++E+VQ+ G ++ A+
Sbjct: 480 PNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKD-KIPKGVPENDEVVQISGASEAIQEALM 538
Query: 260 IISSRLRESQHRDR 273
I++RLR RDR
Sbjct: 539 QITARLRNHLFRDR 552
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 71 KDPSLMV---TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
+ P L+V +RILC K+G VIGK G II IRQ TG I V E++PG +ER+I
Sbjct: 77 QQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIV 136
Query: 128 IS 129
I+
Sbjct: 137 IT 138
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS 399
+FR+LCP K G VIG+ GI+ ++ E GV ++V + V G DE++I I++
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 236/473 (49%), Gaps = 70/473 (14%)
Query: 68 SNPKDPSLMVTTT----YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDE 122
S+ K P+ T +R+LC + G +IGK GS+I+ ++ TG+ I V + IP E
Sbjct: 4 SSSKRPATTATAAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSE 63
Query: 123 ERIIEI--SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE------- 173
ER++ I +++D S +P+ E ++ E G G G++EE
Sbjct: 64 ERVVLIIAPSGKKKDDSNVFDSENPSSEE--PKQEKGSECAGTSG--GDDEEAPSSAQMA 119
Query: 174 ---------YG-GGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
+G V G G G + RM+V V L+ KGGK+I+++R ++
Sbjct: 120 LLRVLERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGA 179
Query: 224 QIRILPRDHSLPRCVSMSEEIVQ--VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH 281
+RI D +P C + ++Q + G ++VK A+ +I++ L+ES G
Sbjct: 180 IVRISSTDQ-IPPCAFPGDVVIQMKITGKFSSVKKALLLITNCLQES---------GAPP 229
Query: 282 SPDRF-FPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSV 340
+ D FP Y P +Y S Y P+ + PM + V
Sbjct: 230 TWDECPFPQPGYPP-------------------DYHSMEYHPQ-----WDHPPNPMPEDV 265
Query: 341 QPF----YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
PF E++ FR+LCP DKVG +IG+ +V LQNE G +KV+DP S+E+II
Sbjct: 266 VPFNRPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIV 325
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SE 455
IS+ E + AQ+ ++ + RIV++G + + RLLV S IG L G+ G L SE
Sbjct: 326 ISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISE 385
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
MRR+TGA+I++ ++++ S DE+VQ++G ++ +DAL ++ RLR ++
Sbjct: 386 MRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMF 438
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 36/202 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
++R+LC K G +IGK G+++++++ +GA I V + EERII IS R + E
Sbjct: 277 VSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVIS--ARENLER 334
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
R S AQ+ + +H+RI+E GF VA R++V
Sbjct: 335 R---HSLAQDGVMRVHNRIVEI-----------------------GFEPSAAVVA-RLLV 367
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
++G LLGKGG +I +MR T IR+ +D + + S +EIVQV+G++ V++A+
Sbjct: 368 HSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQAT-KYESQHDEIVQVIGNLKTVQDAL 426
Query: 259 AIISSRLRESQHRDRSHFHGRL 280
I RLRE+ F GRL
Sbjct: 427 FQILCRLREAM------FPGRL 442
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P +T + +E+V+P + + ++ + L ++SGA+V + + + T+ ++ +SGT +
Sbjct: 545 PAMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGATEGLVVVSGTSD 604
Query: 659 QVERAQSVLQGFILSTQ 675
Q AQS+L FIL Q
Sbjct: 605 QAHFAQSLLHAFILCGQ 621
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 224/446 (50%), Gaps = 72/446 (16%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-----SDTRR 133
T YR LC KAG +IG+ G I K IR T A + ++E +PG +ER++ I R
Sbjct: 18 TVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNRI 77
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
D E + PA +ALF +HD I+ + + +EY V
Sbjct: 78 EDDEDFV---CPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSER------------QTVT 122
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMS-EEIVQVVGDI 251
RM+V +GCL+GKGG++I+++R +T QIR++ + +LP C +++S +E++Q++GD
Sbjct: 123 VRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVI--NDNLPICALALSHDELLQIIGDP 180
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGR----LHSPDRFFPDDDYV-PHMNNTARRPSMD 306
+ V+ A+ ++ L ++ R +++F H P H N +A R + D
Sbjct: 181 SAVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSSHKNYSAPRDAAD 240
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
FS + F +CP + VG VIG+
Sbjct: 241 ARVFS------------------------------------ICF--ICPAENVGGVIGKG 262
Query: 367 EGIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-L 424
+ + E G +KV P D D+ II IS++E +D+ P A L +QTR + +
Sbjct: 263 GCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQ-SPTVNAALRLQTRCSEKV 321
Query: 425 GAD-KDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDEL 482
G D D+ I+TR+L+PSS++GCL G+ G+L SEMR T ANI+I E+VP +E+
Sbjct: 322 GKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQGEDVPRIARENEEM 381
Query: 483 VQIVGEIQAARDALVEVTTRLRSYLY 508
VQI G + AA AL +V RLR+ ++
Sbjct: 382 VQITGSLDAAIKALTQVMLRLRANVF 407
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 23/180 (12%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--SSEEG- 402
ED V+R LCP+ K G +IG I + +++E ++++ + + G DE+++TI +SEE
Sbjct: 16 EDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETN 75
Query: 403 --PDDELF--PAQEALLHIQTRIV------------DLGADKDNIITTRLLVPSSEIGCL 446
DDE F PA +AL + IV + +T R+LVPS +IGCL
Sbjct: 76 RIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCL 135
Query: 447 EGRDGS-LSEMRRSTGANIQILSREEVPACVSGT--DELVQIVGEIQAARDALVEVTTRL 503
G+ G + ++R T A I++++ + +P C DEL+QI+G+ A R+AL +V L
Sbjct: 136 IGKGGQVIQKLRNDTNAQIRVIN-DNLPICALALSHDELLQIIGDPSAVREALYQVAFLL 194
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 174/632 (27%), Positives = 292/632 (46%), Gaps = 83/632 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGR 139
YRILC D G VIGK+G++I +IRQ T A + V + PG ++R+I + + RD +
Sbjct: 43 YRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAE 102
Query: 140 MPSFSP---AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+ P AQ+AL +H+ I+++ +++ N +
Sbjct: 103 VDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKK------------------NTEEANI 144
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS--LPRCVSMSEEIVQVVGDINNV 254
+V ++GK G +I+ +R ++ I++ P+D S C + VQ+ G V
Sbjct: 145 LVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAV 204
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLH--SPDRFFPDDDYVPHMNNTARRP--SMDGARF 310
K A+ +S+ + + ++ + +P P + V +N P ++
Sbjct: 205 KKALFGVSTIIYKHPSKENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIPSVHP 264
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY--------GEDLVFRMLCPIDKVGRV 362
S S S ++ P + + + G P+ S+ P +L FR+LCP K+G V
Sbjct: 265 SLSILGSTHHVPELALPADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVLCPSGKIGLV 324
Query: 363 IGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIV 422
IG ++ ++ E G + V D + +E IITI+S E DD A EA+L +Q +I
Sbjct: 325 IGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKIN 384
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDE 481
D D+ N+ RLLVP+ IGCL GR GS+ ++MR+ T ANI ++S+ + P S +DE
Sbjct: 385 DYEDDRMNL---RLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDE 440
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQ--------KETPPSSTGPTGSALVVEAA 533
LV++ GE RDALV++ RLR + ++ + K T +S GS+L + A
Sbjct: 441 LVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRDGKLTVATSDSLYGSSLSLPAL 500
Query: 534 SPID--ITPA---------REVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNE 582
P + I P R ++ + + S+Q+ G S T K E
Sbjct: 501 LPHNPQIAPLSYDRRGESERALEVFPRTSSYGYSSMQVTDDGY-----GGLPSYTSKAYE 555
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
D E+ +P + K++ K T L ++SGA + ++E
Sbjct: 556 EHLPRD------------------EMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIES 597
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
+ I ISGT EQ + A+++++ FI+ST
Sbjct: 598 KSSRHDHIAYISGTSEQRQSAENLIKAFIMST 629
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 36/352 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------S 398
+++R+LCP +G VIG++ ++ ++ + +KV DP G+D+++I +
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 399 SEEGPDDELFPAQEALLHIQTRIVDL------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
+E ++ + AQ+ALL + IVD +DK N +LVP+S+ + G+ G+
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGA 160
Query: 453 LSEMRRSTG-ANIQILSREEVPA---CVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
+ + RST A I++ ++ A C D VQI G +A + AL V+T + +
Sbjct: 161 VIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPS 220
Query: 509 RDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPA-ATHQSVQIPATSQPS 567
++ ET S PT S ++ S + + PA + D + H S+ I ++
Sbjct: 221 KENIPLET--SIPEPTPSIII---PSELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHV 275
Query: 568 KEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRST----LEVVLPDYAVPKLITKSK 623
E A + ++ R P+++ +P + + V+ P + +I +
Sbjct: 276 PELA------LPADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVLCPSGKIGLVIGRGG 329
Query: 624 TLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQ 675
+ + SGA + + + + + + II I+ T E ++ +S +L Q
Sbjct: 330 ATIKNIRQESGARIDVDDAKNDREESIITITST-EAIDDVKSAAVEAVLLLQ 380
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 252/488 (51%), Gaps = 47/488 (9%)
Query: 45 NNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSI 104
N N+TN N S + + A +P PS V +R+LCHD + GG+IGK G+IIK +
Sbjct: 27 NPNSTNGYSANKRSKPHPSTSAAPSPV-PSGHVL--FRLLCHDSRIGGIIGKGGNIIKGL 83
Query: 105 RQHTGAWINVHELIPGDEERIIEISDTRRRDPE-----GRMPSFSPAQEALFLIHDRILE 159
+Q TGA I + + +R+I I + + G S QEAL + +RILE
Sbjct: 84 QQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVFSGIGSAIEVSKGQEALVRVFERILE 143
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
E + GG V+ R++ VG ++GKGGK +E++R
Sbjct: 144 -------VAAESDSVAGG-------------LVSCRLLAEISSVGAVIGKGGKTVEKIRK 183
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
+ ++++L LP C S +EE++++ GD++ VK + +S RL++ Q D++
Sbjct: 184 DCGCKVKVL--IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVDKTRVISS 241
Query: 280 --LHSPDRF-FPDDDYVPHMNNTARRPSMDGARFSGSNY--RSNNYGPRPSGYSIEAGAA 334
+ + R FP+ ++A RP++ + S +Y +S+E+
Sbjct: 242 KPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSIDYASGTHLFSLESERV 301
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
D+ P + +VFR+LC D+VG VIG+ IV LQNE G + + V G DE++
Sbjct: 302 STLDTSTP--QQQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERL 359
Query: 395 ITISSEEGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCL 446
IT+++ E P+ AQ+ ++ + +R+V D G+ + + ++ RL+V +++GCL
Sbjct: 360 ITVTASENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCL 419
Query: 447 EGRDGS-LSEMRRSTGANIQILSREE-VPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
G+ G+ +SEMR++T +I+I+ R++ P CV D +V+I+G+ +D++ +T RLR
Sbjct: 420 LGKGGTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLR 479
Query: 505 SYLYRDFF 512
L+
Sbjct: 480 DNLFSSIL 487
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
VT +T+E+V+P++ + ++ + L R + SGA V + E + + +II ISGTP++
Sbjct: 671 FVTNTTVEIVIPEHTFGSVYGENGSNLARLRQFSGAKVIVHEPRLGTSDRIIVISGTPDE 730
Query: 660 VERAQSVLQGFILSTQ 675
+ AQS+L FIL+ Q
Sbjct: 731 TQAAQSLLHAFILTGQ 746
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 251/532 (47%), Gaps = 81/532 (15%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V+ R++V VG LLG G +I+QM ++ +IR+ LP C + +E+ Q+ G++
Sbjct: 232 VSFRLLVLDSQVGWLLGNRGSVIKQMSADSGCEIRV--SKEKLPLCALLKDELCQITGEL 289
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
++V+ + ++ L R+ L S F D P M P F
Sbjct: 290 DSVRKGLNAVAQVLLTHPPRESDVLPSGLSS-HAFNRSDALPPGMQPNFSLP------FQ 342
Query: 312 GSNYRSNNYG---PRPSGYSIEAGAAPMSDSVQPFYG--------------EDLVFRMLC 354
G ++ + PRP+ S+ + PF E L FR+LC
Sbjct: 343 GPSHARGPFDSIDPRPNIPPFPTFPDQRSN-IPPFPAFPDALMHSHASVPPEPLTFRLLC 401
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
DKVG +IG+ ++ +Q + G ++K+ + V S++++I IS P D + PAQ A+
Sbjct: 402 SSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAI 461
Query: 415 LHIQTRIVDLGA-DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEV 472
LH+Q RI A +K+ +RL+V +++GCL G+ GS ++EMR+ + A+I +LS++++
Sbjct: 462 LHVQRRITPPTANNKEGAAISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKI 521
Query: 473 PACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEA 532
P V +DE+VQI G+ +A ++AL+++T RLR++L+RD P+ P GS
Sbjct: 522 PKGVQESDEVVQITGDSEAIQEALMQITARLRNHLFRDRMAAMG-PNMQPPFGS------ 574
Query: 533 ASPIDITPAREVQTVTDPP----AATHQSVQ---IPATSQPSKEAAG-SVSETVKQNESE 584
DP A +H+S P SQ K+ G + E ++
Sbjct: 575 ---------------LDPQFGAFAGSHESTSPRIYPNASQFHKDFMGRPLDEMPAPWNAK 619
Query: 585 RREDV--PTVINRVP-----------------LPLVTRSTLEVVLPDYAVPKLITKSKTL 625
DV P I+ +P +P +TR ++++P + +P L
Sbjct: 620 GMRDVGDPMSISGMPGMPHRGIGGFSGAGHSSMPNITR---DIMVPRFVIPALCGHDGGC 676
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
L E SGA ++ E + ISGT +Q+ A+S++Q F+LS A
Sbjct: 677 LNMIREFSGAMITFTEPIADAADTPFMISGTLDQMHAARSLIQAFVLSEPPA 728
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 29/194 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+R+LC K G +IGK G+ IK+I++ TG I + E +P E+R+I IS P
Sbjct: 396 TFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVIS-----GPAHP 450
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SPAQ A+ + RI G + +R++VS
Sbjct: 451 GDGISPAQNAILHVQRRITPPTANN----------KEGAAI-------------SRLIVS 487
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGKGG II +MR +K I +L +D +P+ V S+E+VQ+ GD ++ A+
Sbjct: 488 PNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKD-KIPKGVQESDEVVQITGDSEAIQEALM 546
Query: 260 IISSRLRESQHRDR 273
I++RLR RDR
Sbjct: 547 QITARLRNHLFRDR 560
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNR----ANSNPKDPSLMV---TTTYRILCHDMKAGGVIG 95
+N N + N+S +N + +++ + P L++ RILC K G VIG
Sbjct: 2 ASNVNPSKRPFQKNSSEHNGRGKWQKTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVIG 61
Query: 96 KSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR 133
K G II IRQ G I V E +PG +ER+I I+ T +
Sbjct: 62 KGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEK 99
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
+ R+LCP +K G VIG+ I+ ++ E GV ++V + V G DE++I I+ E
Sbjct: 46 LIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 289/632 (45%), Gaps = 80/632 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGR 139
YRILC D G VIGK G++I +IR T A + V + PG ++R+I + + RD +
Sbjct: 43 YRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAE 102
Query: 140 MPSFSP---AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
P AQ+AL +H+ I+ D + ++ + +
Sbjct: 103 GDDNEPVCAAQDALLRVHNAIV--DALQTLHKNHKDS-------------DKKSTEEANI 147
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMSEEIVQVVGDINNV 254
+V ++GK G +I+ +R ++ I++ P+D S P C + VQ+ G V
Sbjct: 148 LVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAV 207
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLH--SPDRFFPDDDYVPHMNNTARRP--SMDGARF 310
K A+ +S+ + + ++ + +P P + V +N P ++
Sbjct: 208 KKALFGVSTIIYKHPSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIPSVHP 267
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY--------GEDLVFRMLCPIDKVGRV 362
S S S + P + + + G P+ S+ P +L FR+LCP K+G V
Sbjct: 268 SMSVLGSTRHVPELAVPADDHGRLPIYQSILPVIPTYSAPKCSGELEFRVLCPGGKIGLV 327
Query: 363 IGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIV 422
IG ++ ++ E G + V D + +E IITI S E DD A EA+L +Q +I
Sbjct: 328 IGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLLLQAKIN 387
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDE 481
D D+ N+ RLLVP+ IGCL GR GS+ ++MR+ T ANI ++S+ + P S +DE
Sbjct: 388 DSEDDRMNL---RLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDE 443
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE--------TPPSSTGPTGSALVVEAA 533
LV++ GE RDALV++ RLR + ++ + + T +S GS+L + A
Sbjct: 444 LVEVSGEADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPAL 503
Query: 534 SPIDIT-----------PAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNE 582
P + P R ++ + + S+Q+ + + G + +
Sbjct: 504 LPHNQQIAPLGYDRRGEPERALEVFPRTSSYGYSSMQV------TDDGYGGLPSYASK-- 555
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
E VP LE+ +P + K++ K T L ++SGA + ++E
Sbjct: 556 -AYEEHVP--------------RLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEP 600
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
+ + I ISGT EQ A+++++ FI+ST
Sbjct: 601 KSSRHEHIAYISGTSEQRHSAENLIKAFIMST 632
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 160/352 (45%), Gaps = 38/352 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS-------- 399
+++R+LCP +G VIG+ ++ ++++ +KV DP G+D+++I +
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 400 EEGPDDE-LFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGR 449
EG D+E + AQ+ALL + IVD +DK + +LVP+S+ + G+
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGK 160
Query: 450 DGSLSEMRRSTG-ANIQILSR---EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
G++ + RST A I++ + + +C D VQI G +A + AL V+T +
Sbjct: 161 SGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYK 220
Query: 506 YLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPP-AATHQSVQIPATS 564
+ ++ ET S PT S ++ S + + PA + D + H S+ + ++
Sbjct: 221 HPSKENIPLET--SIPDPTPSIII---PSELPVYPASNFYSAPDAAIPSVHPSMSVLGST 275
Query: 565 QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLE----VVLPDYAVPKLIT 620
+ E A V ++ R +++ +P + + E V+ P + +I
Sbjct: 276 RHVPELA------VPADDHGRLPIYQSILPVIPTYSAPKCSGELEFRVLCPGGKIGLVIG 329
Query: 621 KSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFIL 672
+ + + SGA + + + + + + II I T + + ++ +L
Sbjct: 330 RGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLL 381
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 174/629 (27%), Positives = 291/629 (46%), Gaps = 84/629 (13%)
Query: 68 SNPKDPSLMVT---TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER 124
SN K P V +R++CH GG+IG SGSI+ +R+ T I+ + + E+R
Sbjct: 36 SNNKRPVFKVLPGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDR 95
Query: 125 IIEI--SDTRRRDPE---GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
+I + S + R+ + G S AQEA+ + +R+ +G E E+
Sbjct: 96 VILVIGSVSPRKGLQLGDGGEVEVSSAQEAIVRVFERV---------WGLEAEK------ 140
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
G R + V ++++ +G ++GKGGK I +R T +IR+ P P+C +
Sbjct: 141 -GVNSNRAVNSEVFSKLLAHTSQIGAVVGKGGKNITAIRNSTGAKIRVCPP----PQCAT 195
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFF-----PDDDYVP 294
EE+V + G I VK A+ +S L++ + + + F P+ + P
Sbjct: 196 KDEELVLITGGILAVKKALISVSHCLQDCPPLCKVPVSSSIPTVSSFDRSSSDPNAELFP 255
Query: 295 HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+N+ SM+G SN R S + G ++VFR+LC
Sbjct: 256 RLNSLLT--SMEGLSIYERTTNSNESSNRDS----KGGE------------HEVVFRLLC 297
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
+ G VIG+ IV L+++ G + A P+ E+I+TIS+ E + PAQ+A+
Sbjct: 298 SNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLESCNSPAQDAV 357
Query: 415 LHIQTRIVD--LG------ADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQ 465
+ + RI++ +G + ++ +T RLLV +S + G +G + E+R TGA+IQ
Sbjct: 358 ILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQ 417
Query: 466 ILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTG 525
IL E VP S D +VQI GE + ++AL ++T+R+R L + E P S
Sbjct: 418 ILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVTEARPKSNW--- 474
Query: 526 SALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESER 585
++ P V P + +S P AG +ET+ QN E
Sbjct: 475 ---------KVNKDP------VKGKPFSRGKSAFPSGRFLPRN--AGVHAETILQN-GEL 516
Query: 586 REDVPTVINR---VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
D+ + R VT +T+E+++ ++ + + L R ++SGA+V++ +
Sbjct: 517 HTDLSENLERGRGNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDP 576
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ + ISGTP+Q AQS+LQ FI
Sbjct: 577 SVGTSGGKVVISGTPDQTLAAQSLLQAFI 605
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 158/379 (41%), Gaps = 66/379 (17%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
NSN +N + K V +R+LC + AG VIGK G+I++++ TGA I +
Sbjct: 275 NSNESSNRDSKGGEHEVV--FRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSE 332
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
ERI+ IS E SPAQ+A+ L+ RI+E G GF E
Sbjct: 333 HAERIVTISAI-----ESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSME------- 380
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
+ V R++V+ V G G++I ++R T I+IL S+P S
Sbjct: 381 ---------SPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQIL-HGESVPNGASD 430
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA 300
+ +VQ+ G+ V+NA+ I+SR+R++ + + R P N
Sbjct: 431 DDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVTEAR--------------PKSNWKV 476
Query: 301 RRPSMDGARFS--GSNYRSNNYGPRPSGY-----------------SIEAGAAPMSDSVQ 341
+ + G FS S + S + PR +G ++E G M +V
Sbjct: 477 NKDPVKGKPFSRGKSAFPSGRFLPRNAGVHAETILQNGELHTDLSENLERGRGNMFATVT 536
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
E +V + G V GE G ++ ++ G + V DP G+ + IS
Sbjct: 537 NTTVEIIVSEHV-----FGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVIS--- 588
Query: 402 GPDDELFPAQEAL-LHIQT 419
G D+ AQ L IQT
Sbjct: 589 GTPDQTLAAQSLLQAFIQT 607
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 219/453 (48%), Gaps = 46/453 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--------SDT 131
YRILC D G VIGKSG +I SIRQ T A I V + PG ++R+I I
Sbjct: 38 VYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVE 97
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+ + P PAQ+AL +H I+ + E + ++
Sbjct: 98 VDDEFNDKQP-LCPAQDALLKVHAAIVNA------VASLENSD-----------KKKKDK 139
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEIVQVVG 249
+++V ++GK G I+++R +T+ I+I +D + P C + V + G
Sbjct: 140 EECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAG 199
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRL--HSPDRFFPDDDYVPHMNNTARRPSMDG 307
D VK A+ IS+ + + R+ + P P D VP PS D
Sbjct: 200 DSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSD--VPIYPAGGFYPSADS 257
Query: 308 ARFSGS--NYRSNNYGPRPSGYSIEAGAAPMSDSVQPF---YG----EDLVFRMLCPIDK 358
+ S + + P GYS P+ S P YG E+L+ R+LCP DK
Sbjct: 258 IVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDK 317
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
+GRVIG ++ ++ G ++V D DE +IT++S E DD A EA+L +Q
Sbjct: 318 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQ 377
Query: 419 TRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVS 477
+I D + D+ + RLLVPS IGC+ G+ GS ++E+R+ T A+++I S+ E P C
Sbjct: 378 AKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI-SKSERPKCAD 433
Query: 478 GTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
DEL+++VGE+ + RDALV++ RLR +D
Sbjct: 434 ANDELIEVVGEVGSVRDALVQIVLRLRDDALKD 466
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 34/206 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC K G VIG+ GS IKS+R+ +GA + V + +E +I ++ T D M
Sbjct: 310 RVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSM- 368
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A EA+ L+ +I + D + VA R++V
Sbjct: 369 ----AVEAVLLLQAKINDEDD---------------------------DTVAIRLLVPSK 397
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GC++GK G II ++R T+ +RI + P+C ++E+++VVG++ +V++A+ I
Sbjct: 398 IIGCIIGKSGSIINEIRKRTRADVRISKSER--PKCADANDELIEVVGEVGSVRDALVQI 455
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFF 287
RLR+ +DR H D +
Sbjct: 456 VLRLRDDALKDRDTGHNTSAGTDSLY 481
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 162/359 (45%), Gaps = 45/359 (12%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------- 397
E +V+R+LCP +G VIG+S ++ ++ + +KV DP G+ +++ITI
Sbjct: 35 ELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKE 94
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIVDLGADKDN-------IITTRLLVPSSEIGCL 446
E L PAQ+ALL + IV+ A +N ++LVPSS+ +
Sbjct: 95 EVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQSANV 154
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ G ++ +R T ANI+I +++ +C D V I G+ +A + AL ++
Sbjct: 155 IGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAIS-- 212
Query: 503 LRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPA 562
+ +Y+ ++E P +T P ++ S + I PA D + A
Sbjct: 213 --AIMYKFTPREEIPLDTTVPEAPPSII-IPSDVPIYPAGGFYPSADS--------IVSA 261
Query: 563 TSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPL---VTRS---TLEVVLPDYAVP 616
S P AA V E Q S+ P + +P+ +RS + V+ P +
Sbjct: 262 RSVPPVLAATHVPEL--QGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIG 319
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQ 675
++I + + + E SGA V + + + + + +I ++ T E V+ +S+ +L Q
Sbjct: 320 RVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST-ESVDDLKSMAVEAVLLLQ 377
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
L T ST ++V+P AV K++ K + ++SGA + + + + ++ ISGTPEQ
Sbjct: 563 LPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQ 622
Query: 660 VERAQSVLQGFILST 674
A++++Q FI++T
Sbjct: 623 KRTAENLIQAFIMAT 637
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 227/458 (49%), Gaps = 55/458 (12%)
Query: 55 NNTSINNSNNRANSNPKDPSLM---VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAW 111
++ S + R +S D S+ + T YRILC K G V+G+ G I+K++R+ T A
Sbjct: 16 HSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAK 75
Query: 112 INVHELIPGDEERII-------------EISDTRRRDPEGRMPSFSPAQEALFLIHDRIL 158
I V + IPG +ER+I E ++ + D G M AQ+AL IHD+I+
Sbjct: 76 IRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIV 135
Query: 159 ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR 218
+ Y E + + V R++V VGCLLGKGG II+Q+R
Sbjct: 136 ADE----IYDEVAHDE-------------SSDDVTARILVQGNQVGCLLGKGGSIIQQLR 178
Query: 219 METKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHG 278
+T IR+L ++ LP+C S+E+VQ+ G + V+ A+ IS+RL + ++
Sbjct: 179 SDTGAGIRVLSSEN-LPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQ 237
Query: 279 RLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSD 338
+ + + + + H N M S P SG P+S+
Sbjct: 238 IIDASTQRKHESPTLQHEN------PMLPHLHSHHPPPIPLLDPYRSGPQY-----PVSE 286
Query: 339 SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI 397
+ E+ R+LC + +G VIG+S V ++ + G +KV + D S E++I +
Sbjct: 287 T------EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIV 340
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEM 456
SS E P + + P EAL+ + ++ + + + +TRL+VPS+++GC+ G G ++EM
Sbjct: 341 SSNEIPTEPISPTIEALILLHDKVS--ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEM 398
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
RR TGA I++ S+ + P +S DELVQ G+I D
Sbjct: 399 RRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 105/186 (56%), Gaps = 26/186 (13%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--------- 397
+ ++R+LCP K+G V+G IV+ L+ E ++VAD + G+DE++I I
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 398 ---SSEEGPDDEL------FPAQEALLHIQTRIV------DLGADKD-NIITTRLLVPSS 441
++E+ D L AQ+ALL I +IV ++ D+ + +T R+LV +
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 442 EIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVT 500
++GCL G+ GS+ ++R TGA I++LS E +P C +DELVQI G R AL E++
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEIS 221
Query: 501 TRLRSY 506
TRL +
Sbjct: 222 TRLHQH 227
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 449 STIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLDQAKAA 508
Query: 664 QSVLQGFI 671
QS+L+GFI
Sbjct: 509 QSLLEGFI 516
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 222/465 (47%), Gaps = 104/465 (22%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
NNS R ++ P P +RI+C K V G GA I V +L+
Sbjct: 4 NNSKKRRHAPPAAPD----AVFRIVCPAAKTEDVATIGGD---------GAKILVEDLVS 50
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
+E ++ + + S AQ AL + +R ++ EE +
Sbjct: 51 AEERVVVIVGEE------------SAAQVALVRVFERTVD---------EETKN------ 83
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ V+ ++V VGC+LG+GGKI+E++R +T IR+LP+D
Sbjct: 84 ----------STVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVLPKDQPP-LPPP 132
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
EE +Q+ G+ VK AV +S+ F D+ N+
Sbjct: 133 PGEEFIQITGNFGAVKKAVLSVSA----------------------CFYDN------NSG 164
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
A +P +R YS AG + S + F ED+VF++LC +KV
Sbjct: 165 AFKPLDHHSR---------------GCYSESAGHS----SHRMFLEEDVVFKLLCHHEKV 205
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQT 419
G +IG+ +V LQNE G +++ + SDE+++ IS+ E + + PAQEA++ +
Sbjct: 206 GSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHC 265
Query: 420 RIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSG 478
R+ ++G + + +LLV S ++GCL G+ G +SEMRR TGA+I+I S+E++ +S
Sbjct: 266 RLTEIGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQI-KYISQ 324
Query: 479 TDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
+E+VQ++G +Q+ +DAL +T+R+R + F TPP+ + P
Sbjct: 325 NEEVVQVIGSLQSVQDALFHITSRIRETI----FPIRTPPNFSAP 365
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
T+E+ +P + + ++ + LT+ + SGA+V + + +P T+ ++ +SG P+Q AQ
Sbjct: 486 TIEITIPHMYLTHVYGENNSNLTQIRQTSGANVVVHDPKPGATEGLVIVSGAPDQTHAAQ 545
Query: 665 SVLQGFILSTQ 675
S++Q FIL Q
Sbjct: 546 SLIQAFILCGQ 556
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 38/346 (10%)
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
G EEEE G VG RM+ + VGC+LGKGGK +E+MR E QIR+
Sbjct: 97 GGEEEEREVTGAVG------------CRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRV 144
Query: 228 LPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF-----HGRLHS 282
LP +E++ + G + V+ A+ +S+ L+++ D + G S
Sbjct: 145 FRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGS 204
Query: 283 PDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP 342
P D PH + P + + NY SN P P
Sbjct: 205 GTGCPPGMD--PHSQRSYLPPHI--PDYHTRNYPSNAGPPGPRF---------------- 244
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
F+ +++VFRM+ + VG +IG+ + LQ+E G +K+ +PV SDE+++ I++ E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
D PAQ+A++ + +RI + D+ + RLLVPS IGCL G+ GS +SEMR+ TG
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITG 364
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
ANI+I E++P C DE+VQ+ G Q+ +DAL+ +T R+R +
Sbjct: 365 ANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVI 410
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 32/207 (15%)
Query: 63 NNRANSNPKDPSLMVT--TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
N +N+ P P +R++ + G +IGK GS I++++ TGA I + E +
Sbjct: 232 NYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVAD 291
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
+ER++ I+ D SPAQ+A+ ++ RI E+
Sbjct: 292 SDERVVAITARENSD-----MLHSPAQDAVVRVYSRISEAS------------------- 327
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
+ R++V H+GCLLGKGG II +MR T IRI + +PRC
Sbjct: 328 -----IDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIF-GNEQIPRCAQR 381
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRE 267
++E+VQV G ++++A+ I+ R+R+
Sbjct: 382 NDEMVQVTGSFQSIQDALLHITGRIRD 408
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 227/481 (47%), Gaps = 83/481 (17%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---- 128
PS T +R+LC K SI++ +R GA I+V E +P EE ++ I
Sbjct: 62 PSSPSDTLFRLLC-------PASKVSSILRHLRDIPGARIHVDEPLPSCEECVLVILAGS 114
Query: 129 -------------------------SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGG 163
SDT D + R S AQ+AL + I+ +
Sbjct: 115 PSKPAHTNPGNDREFREHDVHRNVSSDTVAGDSDER----SQAQQALLRTFESIVRMNED 170
Query: 164 GGFYGEEEEEYGGGGG---VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
G E +++ + GG G V R++ VG +LG+GGK +E++R E
Sbjct: 171 SGENQEIQKKNADSAPNDRISGGETDG---LVVCRLLAPSHQVGRVLGRGGKTVEKIRQE 227
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------- 273
+ ++I P+D + P C S +E++Q+ G+ + V A++ +SS L++S D
Sbjct: 228 SMAHVKIFPKDQN-PACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTK 286
Query: 274 -----SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYS 328
SH + P Y H N ++YRS +Y P G+
Sbjct: 287 SLGPTSHASSMSVQDEEPSPRRRYGSHHN---------------ADYRSRSYSSIP-GHE 330
Query: 329 IEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD 388
AGA P + ED+VFR+LC DKVG +IG+ +V LQNE G +K+ D D
Sbjct: 331 -NAGAGPRA-----AMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTPD 384
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
DE+++ IS+ E + PAQEA++ RI ++G + + RLLV +IG L G
Sbjct: 385 -LDERLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVG 443
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
R G +++MRR TG +IQI R+++ +DE+VQ++G + + +DAL +T R+R
Sbjct: 444 RGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTF 503
Query: 508 Y 508
+
Sbjct: 504 F 504
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 55/292 (18%)
Query: 40 RHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGS 99
R R +++N + + +SI N A + P+ ++ +R+LC K G +IGK G+
Sbjct: 307 RRRYGSHHNADYRSRSYSSIPGHEN-AGAGPRA-AMEEDVVFRLLCQPDKVGSLIGKGGT 364
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
++++++ TGA I + + P +ER++ IS E ++SPAQEA+ H RI E
Sbjct: 365 VVRALQNETGASIKIVD-TPDLDERLVVISAR-----ETLEQTYSPAQEAVIRAHCRIAE 418
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G+ G VA R++V +G L+G+GG II MR
Sbjct: 419 I-----------------------GYEPGAAVVA-RLLVHGQQIGYLVGRGGHIINDMRR 454
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T T I+I PRD + MS+E+VQV+G++ +V++A+ I++R+R
Sbjct: 455 GTGTSIQIFPRDQ-IQNGGPMSDEVVQVIGNLPSVQDALFHITNRIR------------- 500
Query: 280 LHSPDRFFPDDDYVPHMNN----TARRPSMDGARF-SGSNYRSNNYGPRPSG 326
D FFP +VP+ NN + P F GSN S Y P +G
Sbjct: 501 ----DTFFPMRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAG 548
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 227/481 (47%), Gaps = 83/481 (17%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---- 128
PS T +R+LC K SI++ +R GA I+V E +P EE ++ I
Sbjct: 62 PSSPSDTLFRLLC-------PASKVSSILRHLRDIPGARIHVDEPLPSCEECVLVILAGS 114
Query: 129 -------------------------SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGG 163
SDT D + R S AQ+AL + I+ +
Sbjct: 115 PSKPTHTNPGNDREFREHDVHRNVSSDTVAGDSDER----SQAQQALLRTFESIVRMNED 170
Query: 164 GGFYGEEEEEYGGGGG---VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
G E +++ + GG G V R++ VG +LG+GGK +E++R E
Sbjct: 171 SGENQEIQKKNADSAPNDRISGGETDG---LVVCRLLAPSHQVGRVLGRGGKTVEKIRQE 227
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------- 273
+ ++I P+D + P C S +E++Q+ G+ + V A++ +SS L++S D
Sbjct: 228 SMAHVKIFPKDQN-PACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTK 286
Query: 274 -----SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYS 328
SH + P Y H N ++YRS +Y P G+
Sbjct: 287 SLGPTSHASSMSVQDEEPSPRRRYGSHHN---------------ADYRSRSYSSIP-GHE 330
Query: 329 IEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD 388
AGA P + ED+VFR+LC DKVG +IG+ +V LQNE G +K+ D D
Sbjct: 331 -NAGAGPRA-----AMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTPD 384
Query: 389 GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
DE+++ IS+ E + PAQEA++ RI ++G + + RLLV +IG L G
Sbjct: 385 -LDERLVVISARETLEQTYSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVG 443
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
R G +++MRR TG +IQI R+++ +DE+VQ++G + + +DAL +T R+R
Sbjct: 444 RGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTF 503
Query: 508 Y 508
+
Sbjct: 504 F 504
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 55/292 (18%)
Query: 40 RHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGS 99
R R +++N + + +SI N A + P+ ++ +R+LC K G +IGK G+
Sbjct: 307 RRRYGSHHNADYRSRSYSSIPGHEN-AGAGPRA-AMEEDVVFRLLCQPDKVGSLIGKGGT 364
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
++++++ TGA I + + P +ER++ IS E ++SPAQEA+ H RI E
Sbjct: 365 VVRALQNETGASIKIVD-TPDLDERLVVISAR-----ETLEQTYSPAQEAVIRAHCRIAE 418
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G+ G VA R++V +G L+G+GG II MR
Sbjct: 419 I-----------------------GYEPGAAVVA-RLLVHGQQIGYLVGRGGHIINDMRR 454
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T T I+I PRD + MS+E+VQV+G++ +V++A+ I++R+R
Sbjct: 455 GTGTSIQIFPRDQ-IQNGGPMSDEVVQVIGNLPSVQDALFHITNRIR------------- 500
Query: 280 LHSPDRFFPDDDYVPHMNN----TARRPSMDGARF-SGSNYRSNNYGPRPSG 326
D FFP +VP+ NN + P F GSN S Y P +G
Sbjct: 501 ----DTFFPMRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAG 548
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 187/351 (53%), Gaps = 27/351 (7%)
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
GG++V R++V +GC++GKGG+I++ +R ET QIRIL +D LP C ++E+VQ+
Sbjct: 9 GGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRIL-KDEHLPPCALSTDELVQI 67
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G++ VK A+ I++RL E+ R + H + +P T G
Sbjct: 68 SGEVAVVKKALYQIATRLHENPSRTQ---HLLFSAVPNVYP---------ATGSLIGPTG 115
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP---FYGEDLVFRMLCPIDKVGRVIG 364
A G + YG GY +AG S P ++ R++CP +G VIG
Sbjct: 116 APIVGIAPLMSTYG----GYKGDAGDWSRSLYSAPRDELSSKEFSLRIVCPTGNIGGVIG 171
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
+ I+ ++ E G +KV D+ +IT+S++E DD+ P EA + +Q R +
Sbjct: 172 KGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEK 231
Query: 425 GADKDNII--TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE 481
A +I TTRLLVP+S IGCL G+ G ++EMR+ T ANI+IL ++ +P S DE
Sbjct: 232 IARDSGLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDE 291
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEA 532
+VQI G++ A+DAL V+ RLR+ + F +E S+ P L V A
Sbjct: 292 MVQISGDLDVAKDALTHVSRRLRA----NAFDREGAVSTFLPVLPYLPVSA 338
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 95/199 (47%), Gaps = 28/199 (14%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S P+D + RI+C GGVIGK G+II IRQ +GA I V ++ +I
Sbjct: 144 SAPRDELSSKEFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLIT 203
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
+S D + +SP EA + R E
Sbjct: 204 VSAKEFFDDQ-----YSPTIEAAIRLQPRCSEKI----------------------ARDS 236
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G TR++V +GCLLGKGG II +MR TK IRIL +D+ LP+ S +E+VQ+
Sbjct: 237 GLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDN-LPKVASEDDEMVQI 295
Query: 248 VGDINNVKNAVAIISSRLR 266
GD++ K+A+ +S RLR
Sbjct: 296 SGDLDVAKDALTHVSRRLR 314
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 174/634 (27%), Positives = 279/634 (44%), Gaps = 77/634 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---------- 128
YRILC D G VIGK G +I SIRQ T A + V + PG ++R+I +
Sbjct: 38 VVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVM 97
Query: 129 -SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
SD D + R P AQ AL +HD I VG
Sbjct: 98 LSDINADDDDDREP-VCAAQNALLKVHDAI----------------------VGALAVTD 134
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS--LPRCVSMSEEIV 245
+ ++V ++GK G +I+++R +K+ I++ P+D S C + V
Sbjct: 135 DSDDKEANILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFV 194
Query: 246 QVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDD--DYVPHMNNTAR 301
Q+ GD VK A+ +S+ + + ++ + P P + Y +
Sbjct: 195 QITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELPPTIILPSELPVYPASSLYSVS 254
Query: 302 RPSMDGARFSGSNYRSNNYGPRPSGYSIEA---GAAPMSDSVQPFY--------GEDLVF 350
SM S S + + G +++ G P+ S+ P +L+
Sbjct: 255 DASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLL 314
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R++CP DK+G VIG++ ++ ++ E G + V D + +E IIT+SS E DD A
Sbjct: 315 RVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSSTEATDDVKSAA 374
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSR 469
EA+L +Q +I D D+ ++ RLLVP + IGCL G+ GS+ ++MR + A I I S+
Sbjct: 375 VEAVLLLQAKINDETEDRMHL---RLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHI-SK 430
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALV 529
P S +DELV++ GE+ RDALV++ R L D + ++G G L
Sbjct: 431 GTKPRKASSSDELVEVFGEVDKLRDALVQIVLR----LREDVLKDSVGRQNSGKDGK-LT 485
Query: 530 VEAASPIDIT----PAREVQTVTDPPAATHQSVQIPATS----QPSKEAAGSVSETVKQN 581
V P+ + PA + P Q ++ S + S S E V
Sbjct: 486 VATTEPVSSSSFPMPALLPYSQQITPLRHDQRGEVERGSNVFPRSSLYHGYSPREAVDDG 545
Query: 582 ESERREDVPTVINR-VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
R R VP +E+ +P + K++ K T L ++SGA + ++
Sbjct: 546 FGVRSSYTSKPYGRRVP-------DMEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEIL 598
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
E + + I GTPEQ + A+++++ FI+ST
Sbjct: 599 ESKSSRHDHVAHIFGTPEQWQSAENLIKAFIMST 632
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 150/351 (42%), Gaps = 28/351 (7%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
E +V+R+LCP +G VIG+ ++ ++ + +KV DP G+D+++I +
Sbjct: 35 AELVVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHR 94
Query: 405 DELF---------------PAQEALLHIQTRIVDLGA--DKDNIITTRLLVPSSEIGCLE 447
D + AQ ALL + IV A D + +LVP+S+ +
Sbjct: 95 DVMLSDINADDDDDREPVCAAQNALLKVHDAIVGALAVTDDSDDKEANILVPASQAASVI 154
Query: 448 GRDGS-LSEMRRSTGANIQILSREE---VPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
G+ GS + ++R + + I++ ++ +C D VQI G+ +A + AL V+T +
Sbjct: 155 GKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIM 214
Query: 504 RSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAAT-HQSVQIP- 561
++ ET PT + S + + PA + +V+D + H S+ I
Sbjct: 215 YKCPSKENIPLETSIDELPPT-----IILPSELPVYPASSLYSVSDASMPSGHPSLSILG 269
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
ATS+ S +V + VP V L VV P + +I K
Sbjct: 270 ATSRGSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLLRVVCPGDKIGLVIGK 329
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFIL 672
+ + + SGA V + + + + + II +S T + + ++ +L
Sbjct: 330 AGMTIKNIRKESGARVDVDDAKNDKEESIITVSSTEATDDVKSAAVEAVLL 380
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 249/499 (49%), Gaps = 69/499 (13%)
Query: 209 KGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRES 268
K K++ R +K + I+ + + R +++ I++ GD+ VK A+ +S RL++
Sbjct: 108 KASKLVYTKRCRSKEKFCIIRCE--IKRKITLIMIIIE--GDVLAVKKALVAVSRRLQDC 163
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSG-Y 327
+ D++ G P P S+ R R + P PS
Sbjct: 164 PNVDKTKLIG--GRPLEVVPQQ-------------SLPDPRVDLFQQRGSVLPPIPSNTI 208
Query: 328 SIEAGAAPMSDSVQPFYGED-------LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
S +G+ P+S + + D ++F++LC D+VG VIG+ IV+ LQNE G
Sbjct: 209 SYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGAS 268
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-------KDNIIT 433
+ V PV DE++ITI++ E P+ PAQ ++ + R ++ G + K + ++
Sbjct: 269 ISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVS 328
Query: 434 TRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA 492
RL+VPS+++GCL G+ G+ +SEMR+++GA I+I+ ++VP C S D++VQI GE
Sbjct: 329 ARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNV 388
Query: 493 RDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPA 552
+D L +T RLR L+ PS T A + +++ +I+P V+ DP +
Sbjct: 389 QDGLYHITGRLRDNLF---------PSKT--LNGAGIRSSSAMNEISPYGRVR---DPAS 434
Query: 553 -ATHQSVQI-PATSQPSKEAAG----SVSETVKQNESERREDVPTVINRVPL-------- 598
H SV + P+ S+ + +S ++ S R TV P
Sbjct: 435 FGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIEL 494
Query: 599 ------PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQ 652
++T +T+E+V+P+ + + ++ L R ++SGA V+L E +P + +I+
Sbjct: 495 GSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVI 554
Query: 653 ISGTPEQVERAQSVLQGFI 671
ISGTP++ + AQS+LQ FI
Sbjct: 555 ISGTPDETQAAQSLLQAFI 573
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 175/375 (46%), Gaps = 63/375 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC + + GGVIGK G+I+K+++ GA I+V + +ER+I I T +PE R
Sbjct: 238 FKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI--TASENPESR- 294
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+SPAQ + L+ +R +E+ G E+ G+ G G+ V+ R+VV
Sbjct: 295 --YSPAQNGVILVFNRSIEA-------GIEK-------GLDSG---SKGSPVSARLVVPS 335
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VGCL+GKGG II +MR + IRI+ D +P+C S ++++VQ+ G+ NV++ +
Sbjct: 336 NQVGCLMGKGGTIISEMRKASGAGIRIIGSDQ-VPKCASENDQVVQISGEFVNVQDGLYH 394
Query: 261 ISSRLRE---------------SQHRDRSHFHGRLHSPDRF--FPDDDYVPHMN-NTARR 302
I+ RLR+ S + +GR+ P F P + +T
Sbjct: 395 ITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLT 454
Query: 303 PSMDGARFSGS-----------NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
SMD S S + PR IE G+ S + +
Sbjct: 455 QSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIIT-----NTTVE 509
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
++ P + +G V GE+ + L+ G + + +P G+ ++I+ IS G DE AQ
Sbjct: 510 IVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIIS---GTPDETQAAQ 566
Query: 412 ---EALLHIQTRIVD 423
+A +H ++ D
Sbjct: 567 SLLQAFIHTGPKVPD 581
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 232/472 (49%), Gaps = 62/472 (13%)
Query: 29 YNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDM 88
Y+ + N+ R N+++ +++ + + +S P + T YRILC
Sbjct: 3 YDKSRRSNSKKRRHSNSDDGKRKRLSSR----HDDTSMSSEP------IETIYRILCPAK 52
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------------EISDTRRRD 135
K G V+G+ G I+K++R+ T A I V + IPG +ER+I E ++ + D
Sbjct: 53 KIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISD 112
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G M AQ+AL IHD+I+ + Y E + + V R
Sbjct: 113 GLGNMKPHCFAQDALLKIHDKIVADE----IYDEVAHDE-------------SSDDVTAR 155
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V VGCLLGKGG II+Q+R +T IR+L ++ LP+C S+E+VQ+ G + V+
Sbjct: 156 ILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSEN-LPQCALQSDELVQISGAPSLVR 214
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A+ IS+RL + ++ + + + + + H N M S
Sbjct: 215 KALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHEN------PMLPHLHSHHPP 268
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
P SG P+S++ E+ R+LC + +G VIG+S V ++
Sbjct: 269 PIPLLDPYRSGPQY-----PVSET------EEFSIRILCASELIGSVIGKSGANVRRVEQ 317
Query: 376 EIGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITT 434
+ G +KV + D S E++I +SS E P + + P EAL+ + ++ + + + +T
Sbjct: 318 QTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVS--ASSEKHHSST 375
Query: 435 RLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
RL+VPS+++GC+ G G ++EMRR TGA I++ S+ + P +S DELVQ+
Sbjct: 376 RLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQV 427
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 26/184 (14%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI----------- 397
++R+LCP K+G V+G IV+ L+ E ++VAD + G+DE++I I
Sbjct: 44 IYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTD 103
Query: 398 -SSEEGPDDEL------FPAQEALLHIQTRIV------DLGADKD-NIITTRLLVPSSEI 443
++E+ D L AQ+ALL I +IV ++ D+ + +T R+LV +++
Sbjct: 104 EAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGNQV 163
Query: 444 GCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
GCL G+ GS+ ++R TGA I++LS E +P C +DELVQI G R AL E++TR
Sbjct: 164 GCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTR 223
Query: 503 LRSY 506
L +
Sbjct: 224 LHQH 227
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 234/464 (50%), Gaps = 65/464 (14%)
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
++Q+ GD+ VK A+ +S RL++ + D++ G P P
Sbjct: 123 VLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIG--GRPLEVVPQQ------------- 167
Query: 304 SMDGARFSGSNYRSNNYGPRPSG-YSIEAGAAPMSDSVQPFYGED-------LVFRMLCP 355
S+ R R + P PS S +G+ P+S + + D ++F++LC
Sbjct: 168 SLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCS 227
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
D+VG VIG+ IV+ LQNE G + V PV DE++ITI++ E P+ PAQ ++
Sbjct: 228 NDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVI 287
Query: 416 HIQTRIVDLGAD-------KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQIL 467
+ R ++ G + K + ++ RL+VPS+++GCL G+ G+ +SEMR+++GA I+I+
Sbjct: 288 LVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRII 347
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
++VP C S D++VQI GE +D L +T RLR L+ PS T A
Sbjct: 348 GSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLF---------PSKT--LNGA 396
Query: 528 LVVEAASPIDITPAREVQTVTDPPA-ATHQSVQI-PATSQPSKEAAG----SVSETVKQN 581
+ +++ +I+P V+ DP + H SV + P+ S+ + +S ++
Sbjct: 397 GIRSSSAMNEISPYGRVR---DPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDHP 453
Query: 582 ESERREDVPTVINRVPL--------------PLVTRSTLEVVLPDYAVPKLITKSKTLLT 627
S R TV P ++T +T+E+V+P+ + + ++ L
Sbjct: 454 TSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLA 513
Query: 628 RFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
R ++SGA V+L E +P + +I+ ISGTP++ + AQS+LQ FI
Sbjct: 514 RLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 557
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 175/375 (46%), Gaps = 63/375 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC + + GGVIGK G+I+K+++ GA I+V + +ER+I I T +PE R
Sbjct: 222 FKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI--TASENPESR- 278
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+SPAQ + L+ +R +E+ G E+ G+ G G+ V+ R+VV
Sbjct: 279 --YSPAQNGVILVFNRSIEA-------GIEK-------GLDSG---SKGSPVSARLVVPS 319
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VGCL+GKGG II +MR + IRI+ D +P+C S ++++VQ+ G+ NV++ +
Sbjct: 320 NQVGCLMGKGGTIISEMRKASGAGIRIIGSDQ-VPKCASENDQVVQISGEFVNVQDGLYH 378
Query: 261 ISSRLRE---------------SQHRDRSHFHGRLHSPDRF--FPDDDYVPHMN-NTARR 302
I+ RLR+ S + +GR+ P F P + +T
Sbjct: 379 ITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLT 438
Query: 303 PSMDGARFSGS-----------NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
SMD S S + PR IE G+ S + +
Sbjct: 439 QSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAII-----TNTTVE 493
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
++ P + +G V GE+ + L+ G + + +P G+ ++I+ IS G DE AQ
Sbjct: 494 IVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIIS---GTPDETQAAQ 550
Query: 412 ---EALLHIQTRIVD 423
+A +H ++ D
Sbjct: 551 SLLQAFIHTGPKVPD 565
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 215/450 (47%), Gaps = 48/450 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDT 131
YRILC D G VIGKSG +I SIRQ T A I V + PG ++R+I I D
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDV 95
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
D + AQ+AL +H I + G ++ + +
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRD-----------------K 138
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMSEEIVQVVG 249
++++ ++GK G I+++R +T+T I+I P+D + P C + + G
Sbjct: 139 EQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAG 198
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARRPSMD- 306
+ V+ A+ ISS + + R+ ++ P+ P D VP + PS D
Sbjct: 199 EPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSD--VPLYSAGGLYPSADP 256
Query: 307 -----------GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
GA+ + G YS P S P E+LV R+LCP
Sbjct: 257 ILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHP-PSEELVVRVLCP 315
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
D +GRVIG+ G ++ ++ G ++V D DE IITISS E DD A E +L
Sbjct: 316 FDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVL 375
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPA 474
+Q +I D D+ + RLL+PS IGC+ G+ GS ++E+R+ST A+I+I S+ +
Sbjct: 376 LLQEKIND---DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRI-SKGDKLK 431
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLR 504
C S +DELV++ G++ RDALV++ RLR
Sbjct: 432 CASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC G VIGK G IKSIRQ +GA + V + +E II IS D M
Sbjct: 311 RVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSM- 369
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A E + L+ ++I + +GG V R+++
Sbjct: 370 ----AVETVLLLQEKINDDEGG---------------------------TVIMRLLIPSK 398
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GC++GK G II ++R T+ IRI D +C S S+E+V+V G + V++A+ I
Sbjct: 399 VIGCIIGKSGSIINEIRKSTRADIRISKGDKL--KCASSSDELVEVTGKVGCVRDALVQI 456
Query: 262 SSRLRESQHRDRSHFH 277
RLR+ ++R H
Sbjct: 457 VLRLRDDALKERDVGH 472
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI------SS 399
E +V+R+LCP + +G VIG+S ++ ++ E +KV DP G+ +++ITI
Sbjct: 34 ELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKE 93
Query: 400 EEGPDDE------LFPAQEALLHIQTRIV-------DLGADKDNIITTRLLVPSSEIGCL 446
+ DDE L AQ+ALL + I DL + + ++L+PSS+ +
Sbjct: 94 DVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANV 153
Query: 447 EGRDGS-LSEMRRSTGANIQILSREE---VPACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ GS + ++R T +I+I ++ + +C D I GE + R AL +++
Sbjct: 154 IGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSI 213
Query: 503 LRSYLYR-----DFFQKETPPSSTGPTGSAL-----VVEAASPIDITPAREVQTVTDPPA 552
+ + R D E PP+ P+ L + +A P I P R + PP
Sbjct: 214 MYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP--ILPPRSI-----PPM 266
Query: 553 ATHQSVQ 559
Q VQ
Sbjct: 267 LGAQHVQ 273
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
S+LE+++P A K+I K + ++SGA + + + + +I ISGT EQ A
Sbjct: 555 SSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTA 614
Query: 664 QSVLQGFILST 674
++++Q FI++T
Sbjct: 615 ENLIQAFIMAT 625
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 215/450 (47%), Gaps = 48/450 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-------SDT 131
YRILC D G VIGKSG +I SIRQ T A I V + PG ++R+I I D
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDV 95
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
D + AQ+AL +H I + G ++ ++
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQR-----------------DK 138
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMSEEIVQVVG 249
++++ ++GK G I+++R +T+T I+I P+D + P C + + G
Sbjct: 139 EQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAG 198
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARRPSMD- 306
+ V+ A+ ISS + + R+ ++ P+ P D VP + PS D
Sbjct: 199 EPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSD--VPLYSAGGLYPSADP 256
Query: 307 -----------GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
GA+ + G YS P S P E+LV R+LCP
Sbjct: 257 ILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHP-PSEELVVRVLCP 315
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
D +GRVIG+ G ++ ++ G ++V D DE IITISS E DD A E +L
Sbjct: 316 FDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVL 375
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPA 474
+Q +I D D+ + RLL+PS IGC+ G+ GS ++E+R+ST A+I+I S+ +
Sbjct: 376 LLQEKIND---DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRI-SKGDKLK 431
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLR 504
C S +DELV++ G++ RDALV++ RLR
Sbjct: 432 CASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC G VIGK G IKSIRQ +GA + V + +E II IS D M
Sbjct: 311 RVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSM- 369
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A E + L+ ++I + +GG V R+++
Sbjct: 370 ----AVETVLLLQEKINDDEGG---------------------------TVIMRLLIPSK 398
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GC++GK G II ++R T+ IRI D +C S S+E+V+V G + V++A+ I
Sbjct: 399 VIGCIIGKSGSIINEIRKSTRADIRISKGDKL--KCASSSDELVEVTGKVGCVRDALVQI 456
Query: 262 SSRLRESQHRDRSHFH 277
RLR+ ++R H
Sbjct: 457 VLRLRDDALKERDVGH 472
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI------SS 399
E +V+R+LCP + +G VIG+S ++ ++ E +KV DP G+ +++ITI
Sbjct: 34 ELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKE 93
Query: 400 EEGPDDE------LFPAQEALLHIQTRIV-------DLGADKDNIITTRLLVPSSEIGCL 446
+ DDE L AQ+ALL + I DL + + ++L+PSS+ +
Sbjct: 94 DVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANV 153
Query: 447 EGRDGS-LSEMRRSTGANIQILSREE---VPACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ GS + ++R T +I+I ++ + +C D I GE + R AL +++
Sbjct: 154 IGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSI 213
Query: 503 LRSYLYR-----DFFQKETPPSSTGPTGSAL-----VVEAASPIDITPAREVQTVTDPPA 552
+ + R D E PP+ P+ L + +A P I P R + PP
Sbjct: 214 MYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP--ILPPRSI-----PPM 266
Query: 553 ATHQSVQ 559
Q VQ
Sbjct: 267 LGAQHVQ 273
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 190/335 (56%), Gaps = 10/335 (2%)
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
MLC DK+G VIG+ I+ ++ E G ++KV D V DE++I +SS+E DD + P
Sbjct: 1 MLCRNDKIGGVIGKGGSIINQIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTL 60
Query: 412 EALLHIQTRIVDLGAD--KDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILS 468
EA+LH+Q + + + K+ +ITTR LVPS+ IGCL G+ GS+ SEMR+ T ANI+I+S
Sbjct: 61 EAVLHLQFKTSEKSIEEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMS 120
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSAL 528
++ +P C +ELVQ++GE+ AR+AL+++ TRLRS +++D S P+ S L
Sbjct: 121 KDNIPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLS-L 179
Query: 529 VVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERRED 588
E+ + + ++ A+ + S + GS+
Sbjct: 180 YGRGVPDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGSLGGVQNGGAGGYGSF 239
Query: 589 VPTVINRVP---LP---LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
+R P LP + ST+EV +P+ +V ++ + + +++ E+SGA V L E
Sbjct: 240 SSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHES 299
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDA 677
+P GT ++++ISGTPEQ AQS+LQ F +S Q++
Sbjct: 300 KPGGTDRVVEISGTPEQTHAAQSLLQAFAMSGQNS 334
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 42/231 (18%)
Query: 104 IRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGG 163
IRQ TGA I V + +P +ER+I +S D SP EA+ +
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVVSSKEFVDDR-----ISPTLEAVLHLQ--------- 67
Query: 164 GGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
F E+ G GV + TR +V +GCLLGKGG II +MR T+
Sbjct: 68 --FKTSEKSIEEGKEGV-----------ITTRFLVPSNSIGCLLGKGGSIISEMRKRTRA 114
Query: 224 QIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRS--------- 274
IRI+ +D+ +P+C +EE+VQV+G+++ + A+ I++RLR + +D+
Sbjct: 115 NIRIMSKDN-IPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDGGSNAGSVV 173
Query: 275 ----HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYG 321
+GR PD F D + PS+ + Y S +YG
Sbjct: 174 PPSLSLYGR-GVPDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYG 223
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
+T + + G ++G+ GS I IR+ +GA + +HE PG +R++EIS T
Sbjct: 261 STVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEISGT 313
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 232/454 (51%), Gaps = 54/454 (11%)
Query: 243 EIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH-----SPDRFFPDDDYVP-HM 296
E+ Q+ G + +VK A+ +S RL++ DR+ G H S P + H+
Sbjct: 8 ELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLESLTNLHI 67
Query: 297 NNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPI 356
++ +R S S + RSN G + + A +S Y +++ FR++C
Sbjct: 68 DHHLQRSST----LSTLSNRSN--GNASGAHKLSAEVNRVSALDPKAYQQEVTFRIICSN 121
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
D+VG VIG+ IV LQNE G + V + +++++TI++ E P+ PAQ+A++
Sbjct: 122 DRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVL 181
Query: 417 IQTRIV--------DLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQIL 467
+ ++ V +LG+ K+ +T RL+VPS+++GCL G+ G++ SEMR++TGANI+++
Sbjct: 182 VFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVI 241
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
++VP CVS D+LVQI G + A+ T RLR +L+ ST +G
Sbjct: 242 GNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF----------VSTQNSGG- 290
Query: 528 LVVEAASPIDITPAREVQTVT---DPPAATHQSV---QIPATSQPSKEAAGSVSET--VK 579
AR + +V P A S+ +P P A + T V
Sbjct: 291 -------------ARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGINSRGTNGVS 337
Query: 580 QNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSL 639
+ R+ + +I+ +VT +T+++V+PD + + ++ + L R ++SGA V +
Sbjct: 338 RGLISRKGGLE-LISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIV 396
Query: 640 VEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
E +P + + I ISGTP++ AQS+LQ FIL+
Sbjct: 397 HEPRPGTSDRTIIISGTPDETRAAQSLLQAFILA 430
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 163/340 (47%), Gaps = 34/340 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+RI+C + + G VIGK GSI+++++ +GA I+V + E+R++ I T +PE
Sbjct: 114 TFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTI--TASENPES- 170
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGF-YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
++SPAQ+A+ L+ + +E+ G G ++E Y V R+VV
Sbjct: 171 --TYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPY-----------------VTARLVV 211
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VGCLLGKGG I+ +MR T IR++ D +P CVS ++++VQ+ G +NV+ A+
Sbjct: 212 PSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQ-VPMCVSDNDQLVQISGVFSNVQAAI 270
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR----FSGSN 314
+ RLR+ + G S ++++ R S+ G + +G N
Sbjct: 271 HNATGRLRDHLFVS-TQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGIN 329
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
R N R G G + + + +++ P D +G V GE+ + L+
Sbjct: 330 SRGTNGVSR--GLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLR 387
Query: 375 NEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
G + V +P G+ ++ I IS G DE AQ L
Sbjct: 388 QISGAKVIVHEPRPGTSDRTIIIS---GTPDETRAAQSLL 424
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 174/628 (27%), Positives = 289/628 (46%), Gaps = 97/628 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD----TRRRDP 136
YR+LC + G VIGK G +IK+ R TGA + V G +ER+I ++ T D
Sbjct: 60 YRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASGDDLTVGEDG 119
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
EG + A+ ALF I D I G G E G G GG RG + R+
Sbjct: 120 EG----MTTAEVALFRIFDTI---TGEEGVTAARGGEGEGEGEASGGSTRGASTPIC-RL 171
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG------- 249
+V R+ VG L+GKGG +I +R + +R++P + LP C S +E++Q+
Sbjct: 172 LVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANM-LPACASQGDELLQITAPSRDADG 230
Query: 250 -------DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSP-DRFFPDDDYVPHMNNTAR 301
+ +VKNA+ +I+ LRE ++ + R SP + F + PH +
Sbjct: 231 AERDQKLSMASVKNALRMIAKHLREYPSKNAATESNR--SPFEAFMIGNKTAPHAGVES- 287
Query: 302 RPSMDGARFSGS-NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVG 360
GA+ G + R N G G G ++ FR+LCP+ K G
Sbjct: 288 ----PGAKNGGHMSTRMNLNGVYVPG------------------GTEITFRLLCPVSKTG 325
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTR 420
VIG + +++ ++++ G +KV + V+G++E+II +SS + + AQ AL +
Sbjct: 326 SVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDDGLAPMLAAQVALFRVYRC 385
Query: 421 IVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGT 479
IV+ A + + RLLV +S+IGCL G+ GS + ++R TGA +++L E +P+C +
Sbjct: 386 IVE-SAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIRNETGATVRVLPSEALPSCAN-D 443
Query: 480 DELVQIVGEIQAARDAL--VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPID 537
DEL++I G+ A AL V+ RLR + ++ T + T + +
Sbjct: 444 DELLEI-GQWPADACALGIRIVSGRLRGNIRHKAAERLTSTADAQNTQTMGFDATWQQAE 502
Query: 538 ITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVP--TVINR 595
+ P QT P S +K G+ + V E P +V+N
Sbjct: 503 LIPYGMTQTAYGSPETVMMS--------KTKSTGGARAPPV--------EIAPGVSVVNS 546
Query: 596 VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEG--------- 646
V + + ++ + ++ + ++ ++SGA + L G
Sbjct: 547 VQMAISSQH----------IGSVLGRGGCNISLARQVSGARIKLYPGAAGSRRTADRSVD 596
Query: 647 TQKIIQISGTPEQVERAQSVLQGFILST 674
+ ++++ISG+ EQV AQ ++Q FI S+
Sbjct: 597 SDRLLEISGSSEQVASAQDIIQRFIASS 624
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 98/191 (51%), Gaps = 39/191 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T+R+LC K G VIG++G +I+ IR TGA + V E + G EERII +S + +G
Sbjct: 314 TFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSS----DDGL 369
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT--RMV 197
P + AQ ALF ++ I+ES GN + R++
Sbjct: 370 APMLA-AQVALFRVYRCIVES---------------------------AGNEIPLPFRLL 401
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE--EIVQVVGDINNVK 255
V +GCL+GKGG II+Q+R ET +R+LP + +LP C + E EI Q D +
Sbjct: 402 VQTSQIGCLIGKGGSIIKQIRNETGATVRVLPSE-ALPSCANDDELLEIGQWPADACAL- 459
Query: 256 NAVAIISSRLR 266
+ I+S RLR
Sbjct: 460 -GIRIVSGRLR 469
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 42/205 (20%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH--ELIP-----GDEERIIEISD 130
T R+L ++ G +IGK G++I +IR +GA + V ++P GDE +++I+
Sbjct: 166 TPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDE--LLQIT- 222
Query: 131 TRRRDPEG----RMPSFSPAQEALFLIHDRILE------------SDGGGGFYGEEEEEY 174
RD +G + S + + AL +I + E S G + +
Sbjct: 223 APSRDADGAERDQKLSMASVKNALRMIAKHLREYPSKNAATESNRSPFEAFMIGNKTAPH 282
Query: 175 GG----GGGVGG---------GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMET 221
G G GG G + GG + R++ G ++G+ G++I+Q+R +T
Sbjct: 283 AGVESPGAKNGGHMSTRMNLNGVYVPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQT 342
Query: 222 KTQIRILPRDHSLPR---CVSMSEE 243
++++ + + CVS S++
Sbjct: 343 GAKVKVCEQVNGAEERIICVSSSDD 367
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 229/456 (50%), Gaps = 57/456 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP-- 136
T YR LC K G +IGK G I K +R + + I + E +PG +ER++ I +
Sbjct: 10 TVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETNLF 69
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGF---------YGEEEEEYGGGGGVGGGGFRG 187
E PAQ+ALF++HDR++ D +GE ++
Sbjct: 70 EDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQ--------------- 114
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
V RM+V +GC++GKGG++I+ +R ET+ QIRI +D LP ++E++ +
Sbjct: 115 ----VTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQIRI-TKDEHLPPLALSTDELLLI 169
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G+ + V+ A+ +++RL E+ R + H L S + N A + G
Sbjct: 170 HGEPSVVRKALYQVATRLHENPSRSQ---HLLLSSSANTYQSGGMFVTANAGAPLLGLYG 226
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ GS S+++ P D +D R++CPI +G VIG+
Sbjct: 227 -NYKGS--WSSSFYP---------------DQRDEASAKDFSLRLVCPIANIGGVIGKGG 268
Query: 368 GIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
GI++ ++ E +KV ++ II IS++E +D+ P A L +Q R +
Sbjct: 269 GIIKQIRQESRASIKVDSSGAEGNDCIIFISAKEFFEDQ-SPTMNAALRMQPRCSEKTEK 327
Query: 428 K--DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
+ D++ITTRLLV S+IGCL G+ G+ +SEMR T ANI+I+S + +P DE+VQ
Sbjct: 328 ESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQ 387
Query: 485 IVGEIQAARDALVEVTTRLRSYLY-RDFFQKETPPS 519
I G ++ A +AL++V RL++ ++ RD PP+
Sbjct: 388 ITGSLEVASNALLQVILRLKANIFGRDGALTTFPPA 423
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 26/182 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--SSE--- 400
ED V+R LCP+ K+G +IG+ I + L+ + ++++++ + G DE+++TI SSE
Sbjct: 8 EDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETN 67
Query: 401 --EGPDDELFPAQEALLHIQTRIVDLGADKDNI----------------ITTRLLVPSSE 442
E + + PAQ+AL + R++ D +N +T R+LVP+ +
Sbjct: 68 LFEDTGEYVCPAQDALFMVHDRVI--AEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQ 125
Query: 443 IGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTT 501
IGC+ G+ G + +R T A I+I E +P TDEL+ I GE R AL +V T
Sbjct: 126 IGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVAT 185
Query: 502 RL 503
RL
Sbjct: 186 RL 187
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G + + TR++V R +GCL+GKGG II +MR T+ IRI+ D+ LP+ +E+VQ+
Sbjct: 330 GDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDN-LPKVAGEDDEMVQI 388
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
G + NA+ + RL +++ GR + F P Y+P +T+ P
Sbjct: 389 TGSLEVASNALLQVILRL-------KANIFGRDGALTTFPPALPYIPVSLDTSDGP 437
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 228/464 (49%), Gaps = 65/464 (14%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
T YR LC K G +IG+ G I K +R + + I + E + G EERI+ I S++ +
Sbjct: 50 TVYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLF 109
Query: 138 GRMPSF-SPAQEALFLIHDRILESDGGGGF-------------YGEEEEEYGGGGGVGGG 183
G F PAQ+ALF++HDRI+ D +GE +E+
Sbjct: 110 GDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQV--------- 160
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
V RM+V +GC++GKGG++I+ +R ET QIRIL +H LP S+E
Sbjct: 161 --------VTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEH-LPPLALSSDE 211
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
++ ++G+ V+ A+ +++RL E +P R N
Sbjct: 212 LLLIIGEPAVVRKALYQVATRLHE--------------NPSRSQHLLLSSSSTNMYQSGG 257
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
M +G++ YG G+S ++ SD ++ R++CPI +G VI
Sbjct: 258 GMFVTPTAGASLM-GLYGSYKGGWS----SSYYSDQRDEGSSKEFSLRLVCPIGNIGGVI 312
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD 423
G+ GI++ ++ E +KV D+ II IS++ E F Q A L R+
Sbjct: 313 GKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAK-----EFFEDQSATLTAALRLQP 367
Query: 424 LGADK------DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACV 476
++K D++ITTRLLVP S+IGCL G+ G+ +SEMR T A+I+IL+ + +P
Sbjct: 368 RCSEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVA 427
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLY-RDFFQKETPPS 519
S DE+VQI G A +AL+ V RL++ L+ RD PP+
Sbjct: 428 SEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFPPA 471
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 180/668 (26%), Positives = 303/668 (45%), Gaps = 116/668 (17%)
Query: 51 NIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
N NNN S N R ++N + + YRILC GGVIGKSG +I +IR +T A
Sbjct: 10 NQRNNNESNRNQKRRISNNGEKINRDELVIYRILCPIDVVGGVIGKSGKVINAIRHNTKA 69
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGR---MPS----FSPAQEALFLIHDRILESDGG 163
I V + + G +R+I I + + E M S AQ+AL ++D I+ SD
Sbjct: 70 KIKVFDQLHGCSQRVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKVYDAIVASD-- 127
Query: 164 GGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
EE + ++ ++V L+GK G+ I+++R T+
Sbjct: 128 -----EENIKIDRD------------DKKECLLLVPSSQSFSLIGKAGENIKRIRSTTRA 170
Query: 224 QIRILPRDHSLPR--CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR-------- 273
++++ +D S P C + IV + G+ +VK A+ +S+ L + R+
Sbjct: 171 SVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINPREHIPLDSTGQ 230
Query: 274 ---------SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRP 324
S ++ F+ + D++ + A PS A S SN++
Sbjct: 231 DVPASIIVSSDLSNSVYPQTGFYSNQDHI--LQQRAGVPSYFNA-LSVSNFQ-------- 279
Query: 325 SGYSIEAGAAPM---SDSVQPFYG-------EDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
GY+ E A PM + S+ +G ++LV ++LCP+ + RVIG+ ++ ++
Sbjct: 280 -GYA-ETAANPMPVFASSLPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIR 337
Query: 375 NEIGVDLKVADPVD--GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII 432
G ++V D G DE +I +++ E PDD A EA+L +Q I D A+K +
Sbjct: 338 ETSGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEK---V 394
Query: 433 TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVS--GTDELVQIVGEI 489
+L V S +IGC+ G+ GS ++E+R+ T ANI C+S D+LV++ GEI
Sbjct: 395 KMQLFVSSKDIGCVIGKSGSVINEIRKRTNANI----------CISKGKKDDLVEVAGEI 444
Query: 490 QAARDALVEVTTRLRSYLYRD---FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQT 546
+ R+A++++ RLR + D PP+ T +L +++ P+
Sbjct: 445 SSVRNAIIQIVLRLREDVLGDRDSVAASRKPPART--DNYSLFSGSSNAGYTLPSFMSSA 502
Query: 547 VTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTL 606
+ + H PA GSVS P R+P + S L
Sbjct: 503 SS---SGFHGYGSFPA----GDNVFGSVS--------------PYSFGRLP----SSSAL 537
Query: 607 EVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSV 666
E+++P A+ K++ K L +SGA + + + + I +SGT EQ+ A+++
Sbjct: 538 EILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGDHIALLSGTLEQMRCAENL 597
Query: 667 LQGFILST 674
+Q FI+ST
Sbjct: 598 VQAFIMST 605
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 217/461 (47%), Gaps = 51/461 (11%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII---------- 126
+ YRILC G VIGKSG +I IRQ T A I V + PG ER+I
Sbjct: 42 LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKK 101
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
+I D + + +P AQ AL +HD I+ S + + + FR
Sbjct: 102 DIVDIEYSELDYSVP-LCSAQAALLKVHDAIVASLATAAENTKIDRD----------DFR 150
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEI 244
R++V ++GK G II+ +R T+ ++++ +D S P C + I
Sbjct: 151 ------ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARR 302
V + G+ +VK A+ +S+ + + R++ + P D +
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSI--YPQAGLY 262
Query: 303 PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPM---SDSVQP----FYG----EDLVFR 351
PS D G+N S+ G P GY E A P+ S S P F G E L +
Sbjct: 263 PSQDSIFQHGANV-SSFIGTLPQGYG-ENAANPVPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPA 410
++C K+GRVIG+ ++ ++ G ++V D + D+ +IT+++ E PDD A
Sbjct: 321 VICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSR 469
EA+L +Q +I D DK + +LLV S IGC+ G+ GS+ SE+R+ T A+I I
Sbjct: 381 VEAVLLLQEKINDEDEDK---VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKG 437
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
P C DELV+I GE+ RDAL+++ RLR + RD
Sbjct: 438 NNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRD 478
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 34/193 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRRRDPEGRM 140
+++C K G VIGK G IK IRQ +G+ I V++ D++ +I ++ T D M
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A EA+ L+ ++I +E+E ++V +++VS
Sbjct: 380 -----AVEAVLLLQEKI-----------NDEDE----------------DKVKMQLLVSS 407
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+GC++GK G II ++R TK I I + ++ P+C ++E+V++ G+++NV++A+
Sbjct: 408 KVIGCIIGKSGSIISEIRKRTKADIHI-SKGNNTPKCADPNDELVEISGEVSNVRDALIQ 466
Query: 261 ISSRLRESQHRDR 273
I RLR+ RDR
Sbjct: 467 IVLRLRDDVLRDR 479
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
+V+R+LCP +G VIG+S ++ L++ E +KV DP G E++ITI
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGC 445
SE L AQ ALL + IV + D+D+ RLLVPSS+
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTT 501
+ G+ GS + +R T AN++++S++ C D +V I GE ++ + AL V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 502 RL-----RSYLYRDFFQKETPPSSTGPT 524
+ R + D +E P S P+
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPS 251
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
+T+EV +P AV K++ + L +SGA + + + + ++ ISGT EQ A
Sbjct: 574 TTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTA 633
Query: 664 QSVLQGFILST 674
+++ Q FI+ST
Sbjct: 634 ENLFQAFIMST 644
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 218/461 (47%), Gaps = 51/461 (11%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII---------- 126
+ YRILC G VIGKSG +I IRQ T A I V + PG ER+I
Sbjct: 42 LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKK 101
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
+I D + + +P S AQ AL +HD I+ S + + + FR
Sbjct: 102 DIVDIEYSELDYSVPLCS-AQAALLKVHDAIVASLATAAENTKIDRD----------DFR 150
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEI 244
R++V ++GK G II+ +R T+ ++++ +D S P C + I
Sbjct: 151 ------ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARR 302
V + G+ +VK A+ +S+ + + R++ + P D +
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSI--YPQAGLY 262
Query: 303 PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPM---SDSVQP----FYG----EDLVFR 351
PS D G+N S+ G P GY E A P+ S S P F G E L +
Sbjct: 263 PSQDSIFQHGANV-SSFIGTLPQGYG-ENAANPVPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPA 410
++C K+GRVIG+ ++ ++ G ++V D + D+ +IT+++ E PDD A
Sbjct: 321 VICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSR 469
EA+L +Q +I D DK + +LLV S IGC+ G+ GS+ SE+R+ T A+I I
Sbjct: 381 VEAVLLLQEKINDEDEDK---VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKG 437
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
P C DELV+I GE+ RDAL+++ RLR + RD
Sbjct: 438 NNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRD 478
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 34/193 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRRRDPEGRM 140
+++C K G VIGK G IK IRQ +G+ I V++ D++ +I ++ T D M
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A EA+ L+ ++I +E+E+ +V +++VS
Sbjct: 380 -----AVEAVLLLQEKI----------NDEDED-----------------KVKMQLLVSS 407
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+GC++GK G II ++R TK I I + ++ P+C ++E+V++ G+++NV++A+
Sbjct: 408 KVIGCIIGKSGSIISEIRKRTKADIHI-SKGNNTPKCADPNDELVEISGEVSNVRDALIQ 466
Query: 261 ISSRLRESQHRDR 273
I RLR+ RDR
Sbjct: 467 IVLRLRDDVLRDR 479
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
+V+R+LCP +G VIG+S ++ L++ E +KV DP G E++ITI
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGC 445
SE L AQ ALL + IV + D+D+ RLLVPSS+
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTT 501
+ G+ GS + +R T AN++++S++ C D +V I GE ++ + AL V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 502 RL-----RSYLYRDFFQKETPPSSTGPTGSALVVEA 532
+ R + D +E P S P+ ++ +A
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQA 259
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 226/423 (53%), Gaps = 53/423 (12%)
Query: 104 IRQHTGAWINVHELIPGDEERIIEISDTRRR-----DPEGRMPSFSPAQEALFLIHDRIL 158
+R T A I + E + G +ER+I I + R D E ++ PAQ+ALF +H+++
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKV---CPAQDALFRVHEKLS 57
Query: 159 ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR 218
D G EE +E G +V R++V +GC++GKGG II+ +R
Sbjct: 58 IDDDIGN---EESDE--------------GLAQVTVRLLVPSDQIGCIIGKGGHIIQGIR 100
Query: 219 METKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHG 278
+T IR+L + +LP C +E++Q+ GD V+ A+ +SSRL ++ R +
Sbjct: 101 SDTGAHIRVL-SNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLAS 159
Query: 279 RLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS--NYRSNNYGPRPSGYSIEAGAAPM 336
+ P +P H+ +++ P + S Y+ + G PS Y P
Sbjct: 160 SMTQP---YPVGS---HLGSSSTAPVVGITPLISSYGGYKGDVAGDWPSIYQ------PR 207
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+ ++ R+LC VG VIG+ GI++ ++ E G +KV D + D+ IIT
Sbjct: 208 REESS---AKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKV-DSSNTEDDCIIT 263
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII---TTRLLVPSSEIGCLEGRDGSL 453
+S++E +D + P A +H+Q R + D ++ I TTRLLV +S IGCL G+ GS+
Sbjct: 264 VSAKEFFEDPVSPTINAAVHLQPRCSE-KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSI 322
Query: 454 -SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
+E+RR++ ANI+ILS+E VP + +E+VQI G++ R AL+++TTRL++ +FF
Sbjct: 323 ITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKA----NFF 378
Query: 513 QKE 515
++E
Sbjct: 379 ERE 381
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 35/202 (17%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER 124
R S+ K+ SL R+LC GGVIGK G IIK IRQ +GA+I V D+
Sbjct: 208 REESSAKEFSL------RLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTEDDCI 261
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
I + DP SP A + R E + E
Sbjct: 262 ITVSAKEFFEDP------VSPTINAAVHLQPRCSEKT-------DPESAI---------- 298
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
TR++VS +GCL+GKGG II ++R ++ IRIL +++ +P+ + EE+
Sbjct: 299 -----PSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKEN-VPKVAAEDEEM 352
Query: 245 VQVVGDINNVKNAVAIISSRLR 266
VQ+ GD++ V++A+ I++RL+
Sbjct: 353 VQISGDLDVVRHALLQITTRLK 374
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 232/469 (49%), Gaps = 75/469 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPE 137
T YR LC K G +IGK G I K +R + + I + E +PG +ERI+ I S + +
Sbjct: 42 TVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLF 101
Query: 138 GRMPSF-SPAQEALFLIHDRILESDGGGGF---------YGEEEEEYGGGGGVGGGGFRG 187
G + PAQ+ALF++HDR++ D +GE ++
Sbjct: 102 GETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQ--------------- 146
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
V RM+V +GC++GKGG++I+ +R ET QIRI DH P +S+ +E++ +
Sbjct: 147 ----VTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSI-DELLLI 201
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G+ + V+ A+ +++RL E+ R + H L S ++ G
Sbjct: 202 HGEPSAVRKALYQVATRLHENPSRSQ---HLILSSS-------------------ANVHG 239
Query: 308 ARFSGSNYRS---NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
F +N + YG G+S ++ D ++ R++CP +G VIG
Sbjct: 240 GVFVTANAGAPVLGLYGNYKGGWS----SSFYPDQRDESSTKEFSLRLVCPTANIGGVIG 295
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
+ GI++ ++ E +KV D+ II IS++E +D+ P A L +Q R D
Sbjct: 296 KGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAALRLQPRCSDK 354
Query: 425 GADK--DNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE 481
+ D++ITTRLLV S+IGCL G+ G+ +SEMR T ANI+I+S + +P DE
Sbjct: 355 TEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNLPKVAVEDDE 414
Query: 482 L----------VQIVGEIQAARDALVEVTTRLRSYLY-RDFFQKETPPS 519
+ VQI G ++ A +AL++V RL++ L+ RD PP+
Sbjct: 415 MVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPA 463
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 22/180 (12%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--SSEE-- 401
ED V+R LCP+ K+G +IG+ I + L+ + ++++++ + G DE+I+TI SSEE
Sbjct: 40 EDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETN 99
Query: 402 --GPDDE-LFPAQEALLHIQTRIV--DLG-------ADKDNI-----ITTRLLVPSSEIG 444
G E + PAQ+AL + R++ DL +DN +T R+LVP+ +IG
Sbjct: 100 LFGETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIG 159
Query: 445 CLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
C+ G+ G + +R T A I+I + +P DEL+ I GE A R AL +V TRL
Sbjct: 160 CVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRL 219
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 37/250 (14%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
+D S + R++C GGVIGK G IIK IRQ + A I V ++ II IS
Sbjct: 271 RDESSTKEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISA 330
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ + SP A + R + + E+E G +
Sbjct: 331 KEFFEDQ------SPTMNAALRLQPRCSD---------KTEKE-------------SGDS 362
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV-VG 249
+ TR++V R +GCL+GKGG II +MR +T+ IRI+ D+ LP+ +E+VQV V
Sbjct: 363 VITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDN-LPKVAVEDDEMVQVNVY 421
Query: 250 DINNVK--NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
+ N+V+ ++ + S+ L + R +++ GR + F P Y+P +T+ DG
Sbjct: 422 NFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPALPYIPMSLDTS-----DG 476
Query: 308 ARFSGSNYRS 317
+++ + +S
Sbjct: 477 SKYGSRDSQS 486
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 216/461 (46%), Gaps = 51/461 (11%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII---------- 126
+ YRILC G VIGKSG +I IRQ T A I V + PG ER+I
Sbjct: 42 LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKK 101
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
+I D + + +P AQ AL +HD I+ S + + + FR
Sbjct: 102 DIVDIEYSELDYSVP-LCSAQAALLKVHDAIVASLATAAENTKIDRD----------DFR 150
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR--CVSMSEEI 244
R++V ++GK G II+ +R T+ ++++ +D S P C + I
Sbjct: 151 ------ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNI 204
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS--PDRFFPDDDYVPHMNNTARR 302
V + G+ +VK A+ +S+ + + R++ + P D +
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSI--YPQAGLY 262
Query: 303 PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPM---SDSVQP----FYG----EDLVFR 351
PS D G+N S+ G P GY E A P+ S S P F G E L +
Sbjct: 263 PSQDSIFQHGANV-SSFIGTLPQGYG-ENAANPLPVFSASALPVVHGFGGSSRSEKLAIK 320
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPA 410
++C K+GRVIG+ ++ ++ G ++V D + D+ +IT+++ E PDD A
Sbjct: 321 VICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMA 380
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSR 469
EA+L +Q +I D DK + +LLV S IGC+ G+ GS+ SE+R+ T A+I I
Sbjct: 381 VEAVLLLQEKINDEDEDK---VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKG 437
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
P DELV+I GE+ RDAL+++ RLR + RD
Sbjct: 438 NNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRD 478
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 34/193 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRRRDPEGRM 140
+++C K G VIGK G IK IRQ +G+ I V++ D++ +I ++ T D M
Sbjct: 320 KVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A EA+ L+ ++I +E+E ++V +++VS
Sbjct: 380 -----AVEAVLLLQEKI-----------NDEDE----------------DKVKMQLLVSS 407
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+GC++GK G II ++R TK I I + ++ P+ ++E+V++ G+++NV++A+
Sbjct: 408 KVIGCIIGKSGSIISEIRKRTKADIHI-SKGNNTPKSADPNDELVEISGEVSNVRDALIQ 466
Query: 261 ISSRLRESQHRDR 273
I RLR+ RDR
Sbjct: 467 IVLRLRDDVLRDR 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 31/208 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI--SSEEGPDD 405
+V+R+LCP +G VIG+S ++ L++ E +KV DP G E++ITI S E D
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 406 ------------ELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGC 445
L AQ ALL + IV + D+D+ RLLVPSS+
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTT 501
+ G+ GS + +R T AN++++S++ C D +V I GE ++ + AL V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVSA 223
Query: 502 RL-----RSYLYRDFFQKETPPSSTGPT 524
+ R + D +E P S P+
Sbjct: 224 IMYKVSPREQIPLDTTVQEVPASIIIPS 251
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
+T+EV +P AV K++ + L +SGA + + + + ++ ISGT EQ A
Sbjct: 574 TTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTA 633
Query: 664 QSVLQGFILST 674
+++ Q FI+ST
Sbjct: 634 ENLFQAFIMST 644
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 176/662 (26%), Positives = 298/662 (45%), Gaps = 109/662 (16%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
NN+ S N R + + + +V YRILC GGVIGKSG +I +IR +T A I
Sbjct: 13 NNSESNRNQKRRISHDKINRDELVV--YRILCPIDVVGGVIGKSGKVINAIRHNTKAKIK 70
Query: 114 VHELIPGDEERIIEI--SDTRRRDPEGRMPS----FSPAQEALFLIHDRILESDGGGGFY 167
V + + G +R+I I S +++ G S AQ+AL ++D I+ SD
Sbjct: 71 VFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASD------ 124
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
EE V + R++V L+GK G+ I+++R T+ +++
Sbjct: 125 ----EENNTKTNVDRDDNK------ECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 228 LPRDHSLPR--CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------------ 273
+ +D S P C + +V + G+ +VK A+ +S+ + + R+
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPA 234
Query: 274 ------SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR----FSGSNYRSNNYGPR 323
S ++ F+ + D++ + A PS A F G Y P
Sbjct: 235 ASVIVPSDLSNSVYPQTGFYSNQDHI--LQQGAGVPSYFNALSVSDFQG--YAETAANPV 290
Query: 324 PSGYSIEAGAAPMSDSVQPFYG----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P + A + P++ F G E+LVF++LCP+ + RVIG+ ++ ++ G
Sbjct: 291 P----VFASSLPVT---HGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGS 343
Query: 380 DLKVADPVD--GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
++V D G DE +I +++ E PDD A EA+L +Q I D A+ + +LL
Sbjct: 344 CIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN---VKMQLL 400
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARD 494
V S IGC+ G+ GS ++E+R+ T ANI C+S D+LV++ GE+ + RD
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRD 450
Query: 495 ALVEVTTRLRSYLY--RDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPA 552
AL+++ RLR + +D PP+ T + + +S T + ++ +
Sbjct: 451 ALIQIVLRLREDVLGDKDSVATRKPPAR---TDNCSFLSGSSNAGYTLPSFMSSMAS-TS 506
Query: 553 ATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPD 612
H PA GS P R+P + S LE+++P
Sbjct: 507 GFHGYGSFPA----GDNVLGSTG--------------PYSYGRLP----SSSALEILIPA 544
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFIL 672
+A+ K++ K L +SGA + + + I +SGT EQ+ A++++Q F++
Sbjct: 545 HAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVM 604
Query: 673 ST 674
ST
Sbjct: 605 ST 606
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 216/444 (48%), Gaps = 78/444 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IGK G I K IR T + + ++E +PG EER++ I T
Sbjct: 44 TVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNHF 103
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+G + PA +ALF +HD ++ +++ G V
Sbjct: 104 GDDGEL--VCPALDALFKVHDMVVADIDHDDGNDDDD--------------LGEKQTVTV 147
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMS-EEIVQVVGDIN 252
RM+V +GC++GKGG++I+ +R +T QIR++ +DH LP C +++S +E++Q++G+
Sbjct: 148 RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDH-LPSCALTLSHDELLQIIGEPL 205
Query: 253 NVKNAVAIISSRLRESQHRDRSHFH-------GRLHSPDRFFPDDDYVP-HMNNTARRPS 304
V+ A+ ++S L H + S F +H P H N RR
Sbjct: 206 VVREALYQVASLL----HANPSRFQHLLLSSSSSMHQPGAMLMSAALTSSHRNYAVRRDI 261
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
D F + F +CP + VG VIG
Sbjct: 262 ADAREFC------------------------------------VCF--ICPAENVGGVIG 283
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD- 423
+ G + ++ E G ++V D+ II ISS+E +D+ PA A + +Q R +
Sbjct: 284 KGGGFINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ-SPAVNAAIRLQQRCSEK 342
Query: 424 LGADKDNI-ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE 481
+G D +++ I+TRLLV SS+IGCL G+ G+ +SEMR T ANI+IL +E+VP +E
Sbjct: 343 VGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE 402
Query: 482 LVQIVGEIQAARDALVEVTTRLRS 505
+VQI G AA AL +V RLR+
Sbjct: 403 MVQITGNPDAAMKALTQVILRLRA 426
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 103/182 (56%), Gaps = 25/182 (13%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS--EE-- 401
E+ V+R LCP+ K G +IG+ I + +++E ++++ + + G +E+++TI S EE
Sbjct: 42 EETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELN 101
Query: 402 --GPDDELF-PAQEALLHIQTRIV------------DLGADKDNIITTRLLVPSSEIGCL 446
G D EL PA +AL + +V DLG + +T R+LVPS +IGC+
Sbjct: 102 HFGDDGELVCPALDALFKVHDMVVADIDHDDGNDDDDLG--EKQTVTVRMLVPSDQIGCV 159
Query: 447 EGRDGS-LSEMRRSTGANIQILSREEVPACV--SGTDELVQIVGEIQAARDALVEVTTRL 503
G+ G + +R T A I+++ ++ +P+C DEL+QI+GE R+AL +V + L
Sbjct: 160 IGKGGQVIQNLRNDTNAQIRVI-KDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLL 218
Query: 504 RS 505
+
Sbjct: 219 HA 220
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
I IRQ TGA I V+ +++ II IS + + SPA A + R E
Sbjct: 288 FINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ------SPAVNAAIRLQQRCSE 341
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G++ + ++TR++VS +GCL+GKGG +I +MR
Sbjct: 342 K------VGKDANDLA----------------ISTRLLVSSSQIGCLIGKGGAVISEMRS 379
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T+ IRIL ++ +P+ EE+VQ+ G+ + A+ + RLR + HG
Sbjct: 380 VTRANIRILQKE-DVPKIAREDEEMVQITGNPDAAMKALTQVILRLRANSF---DMDHGL 435
Query: 280 LHSPDRFFPDDDYVPHM---NNTARRPSMDGARFSGSNYRSNNY 320
+ P F Y+P + ++ ++ D R SN + NY
Sbjct: 436 VLLPTSF----PYIPQVTENSSKSKYAKRDDHRKLNSNSKRRNY 475
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 217/457 (47%), Gaps = 62/457 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----------- 128
+R++CH GG+IG+SGS I IR+ TG ++ E + G + R+I I
Sbjct: 26 AFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASPGKRIT 85
Query: 129 -SDTRRRDPEG----RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
+ T D G S AQEA+ + +R+ E DG + E GGV
Sbjct: 86 LNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDG------QRERR----GGVDNN 135
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
G ++ +G ++GKGGK + +MR E+ IR LP P C S ++
Sbjct: 136 SNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPP----PHCASKDDQ 191
Query: 244 IVQVVGDINNVKNAVAIISSRLRES--QHRDRSHFHGRLHSPDRFF---PDDDYVPHMNN 298
++Q+ G I VK A+ ++ L + +D + L P ++ PH+++
Sbjct: 192 LIQITGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSDPHAEFFPHLSS 251
Query: 299 TARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDK 358
P + G SG+++ S +AG P D+ + ++ FR+LC
Sbjct: 252 LL--PPLSGN--SGTSHP----------LSSDAGEDPNQDAEAVRH--EVSFRLLCSNGA 295
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
G +IG+ IV LQNE G + A P+ S E+++TIS+ E + PAQ A + +
Sbjct: 296 AGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVF 355
Query: 419 TRIVDLGADKDN--------IITTRLLVPSSEIGCL--EGRDGSL-SEMRRSTGANIQIL 467
R V+ +K + +T RLLV S + CL +G G++ SEM +GA+I+IL
Sbjct: 356 ARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRIL 415
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
E++ AC S D +++I GE + ++AL VT +LR
Sbjct: 416 DGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P+V + +E+V+P+ + + + + L R ++SGA V + E + +I+ ISGTP+
Sbjct: 612 PIVVNTIIELVVPEDTIGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPD 671
Query: 659 QVERAQSVLQGFILSTQ 675
Q AQS+LQ FIL+ Q
Sbjct: 672 QTNAAQSLLQAFILADQ 688
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 235/488 (48%), Gaps = 75/488 (15%)
Query: 217 MRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR--- 273
M ++ +IR+ LP C +E+ Q+ G++++V+ + ++ L ++
Sbjct: 1 MSTDSCCEIRV--SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVL 58
Query: 274 -SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS-NNYGPRPSGYSIEA 331
+H G S FF D +P +P++ F G N N+ P
Sbjct: 59 GAHNSGSSRS---FFNQPDVLP----PGMQPNLH-LPFQGPNVAHLPNF---PEALMHGH 107
Query: 332 GAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
G+ P E L FR+LC DKVG +IG+ ++ +QN+ G ++KV D V S+
Sbjct: 108 GSVP---------PEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSE 158
Query: 392 EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG 451
++I+ IS P D + PAQ A+LH+Q +IV K+ RL+V +++GCL G+ G
Sbjct: 159 DRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGG 218
Query: 452 S-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
S ++EMR+ +GA+I +LS++++P V DE+VQI G +A ++AL+++T RLR++L+RD
Sbjct: 219 SIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRD 278
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPP----AATHQSVQ---IPAT 563
T P+ P G + DP A H S+ P
Sbjct: 279 RM-ASTVPNVQPPFG---------------------LVDPQFGSYAGNHDSISPRIFPNV 316
Query: 564 SQPSKEAAG------SVSETVK----QNESERREDVPTVINR----VPLP----LVTRST 605
Q K+ G S T+K + D+P + +R P P +V+ T
Sbjct: 317 PQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTIT 376
Query: 606 LEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQS 665
+V++P +P L + L R E SGA +++ + I ISGTP+Q+ A+S
Sbjct: 377 ADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARS 436
Query: 666 VLQGFILS 673
++Q F+LS
Sbjct: 437 LIQAFVLS 444
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 116/245 (47%), Gaps = 49/245 (20%)
Query: 33 YQPNNNYRHRGNNNNNTNN----IMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDM 88
QPN + +G N + N +M+ + S+ P +P T+R+LC
Sbjct: 80 MQPNLHLPFQGPNVAHLPNFPEALMHGHGSV----------PPEP-----LTFRLLCSSD 124
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQE 148
K GG+IGK G+ IKSI+ TG I V + +P E+RI+ IS P SPAQ
Sbjct: 125 KVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISG-----PAHPGDGISPAQN 179
Query: 149 ALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLG 208
A+ + +I+ + +E R++VS VGCLLG
Sbjct: 180 AILHVQRKIVPT--------SNTKE----------------GPAICRLIVSPNQVGCLLG 215
Query: 209 KGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRES 268
KGG II +MR + I +L +D +P+ V ++E+VQ+ G ++ A+ I++RLR
Sbjct: 216 KGGSIIAEMRKLSGAHIIVLSKD-KIPKGVPENDEVVQISGASEAIQEALMQITARLRNH 274
Query: 269 QHRDR 273
RDR
Sbjct: 275 LFRDR 279
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 216/441 (48%), Gaps = 70/441 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IGK G I K IR T + + ++E +PG EER++ + T
Sbjct: 44 TVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHF 103
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+G + PA +ALF +HD ++ ++ + G V
Sbjct: 104 GDDGEL--VCPALDALFKVHDMVVADADQDDGTDDDND-------------LGEKQTVTV 148
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMS-EEIVQVVGDIN 252
RM+V +GC++GKGG++I+ +R +T QIR++ +DH LP C +++S +E++ ++G+
Sbjct: 149 RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDH-LPACALTLSHDELLLIIGEPL 206
Query: 253 NVKNAVAIISSRLRES----QHRDRSHFHGRLHSPDRFFPDDDYVP-HMNNTARRPSMDG 307
V+ A+ ++S L ++ QH S +H P H N RR D
Sbjct: 207 VVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADA 266
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
F + F +CP + VG VIG+
Sbjct: 267 REFC------------------------------------VCF--ICPAENVGGVIGKGG 288
Query: 368 GIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-LGA 426
G + ++ E G ++V D+ II ISS+E +D+ PA A + +Q R + +G
Sbjct: 289 GFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGK 347
Query: 427 DKDNI-ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
D +++ I+TRLLV SS+IGCL G+ G+ +SEMR T ANI+IL +E+VP +E+VQ
Sbjct: 348 DANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQ 407
Query: 485 IVGEIQAARDALVEVTTRLRS 505
I G AA AL +V RLR+
Sbjct: 408 ITGSPDAAMKALTQVILRLRA 428
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 26/181 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS--EE-- 401
ED V+R LCP+ K G +IG+ I + +++E ++++ + + G +E+++T+ S EE
Sbjct: 42 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 101
Query: 402 --GPDDELF-PAQEALLHIQTRIV-------------DLGADKDNIITTRLLVPSSEIGC 445
G D EL PA +AL + +V DLG + +T R+LVPS +IGC
Sbjct: 102 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLG--EKQTVTVRMLVPSDQIGC 159
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACV--SGTDELVQIVGEIQAARDALVEVTTR 502
+ G+ G + +R T A I+++ ++ +PAC DEL+ I+GE R+AL +V +
Sbjct: 160 VIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASL 218
Query: 503 L 503
L
Sbjct: 219 L 219
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
I IRQ TGA I V+ D++ II IS + + SPA A + R E
Sbjct: 290 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ------SPAVNAAIRLQQRCSE 343
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G++ + ++TR++VS +GCL+GKGG +I +MR
Sbjct: 344 K------VGKDANDLA----------------ISTRLLVSSSQIGCLIGKGGAVISEMRS 381
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T+ IRIL ++ +P+ EE+VQ+ G + A+ + RLR + HG
Sbjct: 382 VTRANIRILQKE-DVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF---DMDHGL 437
Query: 280 LHSPDRFFPDDDYVPHMNNTARRPSM----DGARFSGSNYRSNN 319
+ P F Y+P + ++ + D ++ + ++ R N+
Sbjct: 438 VLLPTSF----PYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNH 477
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 214/441 (48%), Gaps = 70/441 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IGK G I K IR T + + ++E +PG EER++ + T
Sbjct: 19 TVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHF 78
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+G + PA +ALF +HD ++ ++ + G V
Sbjct: 79 GDDGEL--VCPALDALFKVHDMVVADADQDDGTDDDND-------------LGEKQTVTV 123
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMS-EEIVQVVGDIN 252
RM+V +GC++GKGG++I+ +R +T QIR++ +DH LP C +++S +E++ ++G+
Sbjct: 124 RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDH-LPACALTLSHDELLLIIGEPL 181
Query: 253 NVKNAVAIISSRLRES----QHRDRSHFHGRLHSPDRFFPDDDYVP-HMNNTARRPSMDG 307
V+ A+ ++S L ++ QH S +H P H N RR D
Sbjct: 182 VVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADA 241
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
F +CP + VG VIG+
Sbjct: 242 REFCVC--------------------------------------FICPAENVGGVIGKGG 263
Query: 368 GIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-LGA 426
G + ++ E G ++V D+ II ISS+E +D+ PA A + +Q R + +G
Sbjct: 264 GFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGK 322
Query: 427 DKDNI-ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
D +++ I+TRLLV SS+IGCL G+ G+ +SEMR T ANI+IL +E+VP +E+VQ
Sbjct: 323 DANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQ 382
Query: 485 IVGEIQAARDALVEVTTRLRS 505
I G AA AL +V RLR+
Sbjct: 383 ITGSPDAAMKALTQVILRLRA 403
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 26/181 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS--EE-- 401
ED V+R LCP+ K G +IG+ I + +++E ++++ + + G +E+++T+ S EE
Sbjct: 17 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 76
Query: 402 --GPDDELF-PAQEALLHIQTRIV-------------DLGADKDNIITTRLLVPSSEIGC 445
G D EL PA +AL + +V DLG + +T R+LVPS +IGC
Sbjct: 77 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLG--EKQTVTVRMLVPSDQIGC 134
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACV--SGTDELVQIVGEIQAARDALVEVTTR 502
+ G+ G + +R T A I+++ ++ +PAC DEL+ I+GE R+AL +V +
Sbjct: 135 VIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASL 193
Query: 503 L 503
L
Sbjct: 194 L 194
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
I IRQ TGA I V+ D++ II IS + + SPA A + R E
Sbjct: 265 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ------SPAVNAAIRLQQRCSE 318
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G++ + ++TR++VS +GCL+GKGG +I +MR
Sbjct: 319 K------VGKDANDLA----------------ISTRLLVSSSQIGCLIGKGGAVISEMRS 356
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T+ IRIL ++ +P+ EE+VQ+ G + A+ + RLR + HG
Sbjct: 357 VTRANIRILQKE-DVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF---DMDHGL 412
Query: 280 LHSPDRFFPDDDYVPHMNNTARRPSM----DGARFSGSNYRSNN 319
+ P F Y+P + ++ + D ++ + ++ R N+
Sbjct: 413 VLLPTSF----PYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNH 452
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 214/441 (48%), Gaps = 70/441 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR---- 134
T YR LC K G +IGK G I K IR T + + ++E +PG EER++ + T
Sbjct: 11 TVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHF 70
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+G + PA +ALF +HD ++ ++ + G V
Sbjct: 71 GDDGEL--VCPALDALFKVHDMVVADADQDDGTDDDND-------------LGEKQTVTV 115
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMS-EEIVQVVGDIN 252
RM+V +GC++GKGG++I+ +R +T QIR++ +DH LP C +++S +E++ ++G+
Sbjct: 116 RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDH-LPACALTLSHDELLLIIGEPL 173
Query: 253 NVKNAVAIISSRLRES----QHRDRSHFHGRLHSPDRFFPDDDYVP-HMNNTARRPSMDG 307
V+ A+ ++S L ++ QH S +H P H N RR D
Sbjct: 174 VVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADA 233
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
F +CP + VG VIG+
Sbjct: 234 REFCVC--------------------------------------FICPAENVGGVIGKGG 255
Query: 368 GIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-LGA 426
G + ++ E G ++V D+ II ISS+E +D+ PA A + +Q R + +G
Sbjct: 256 GFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGK 314
Query: 427 DKDNI-ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
D +++ I+TRLLV SS+IGCL G+ G+ +SEMR T ANI+IL +E+VP +E+VQ
Sbjct: 315 DANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQ 374
Query: 485 IVGEIQAARDALVEVTTRLRS 505
I G AA AL +V RLR+
Sbjct: 375 ITGSPDAAMKALTQVILRLRA 395
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 26/180 (14%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS--EE--- 401
D V+R LCP+ K G +IG+ I + +++E ++++ + + G +E+++T+ S EE
Sbjct: 10 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 69
Query: 402 -GPDDELF-PAQEALLHIQTRIV-------------DLGADKDNIITTRLLVPSSEIGCL 446
G D EL PA +AL + +V DLG + +T R+LVPS +IGC+
Sbjct: 70 FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLG--EKQTVTVRMLVPSDQIGCV 127
Query: 447 EGRDGS-LSEMRRSTGANIQILSREEVPACV--SGTDELVQIVGEIQAARDALVEVTTRL 503
G+ G + +R T A I+++ ++ +PAC DEL+ I+GE R+AL +V + L
Sbjct: 128 IGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 186
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE 159
I IRQ TGA I V+ D++ II IS + + SPA A + R E
Sbjct: 257 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ------SPAVNAAIRLQQRCSE 310
Query: 160 SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRM 219
G++ + ++TR++VS +GCL+GKGG +I +MR
Sbjct: 311 K------VGKDANDLA----------------ISTRLLVSSSQIGCLIGKGGAVISEMRS 348
Query: 220 ETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR 279
T+ IRIL ++ +P+ EE+VQ+ G + A+ + RLR + HG
Sbjct: 349 VTRANIRILQKE-DVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF---DMDHGL 404
Query: 280 LHSPDRFFPDDDYVPHMNNTARRPSM----DGARFSGSNYRSNN 319
+ P F Y+P + ++ + D ++ + ++ R N+
Sbjct: 405 VLLPTSF----PYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNH 444
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 190/427 (44%), Gaps = 70/427 (16%)
Query: 294 PHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML 353
PH PSM + NY SN P P F +++VFRM+
Sbjct: 201 PHSQRGYLPPSM--PDYHARNYSSNMAAPGPRF----------------FVEQEIVFRMI 242
Query: 354 CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEA 413
C + VG +IG+ + LQ+E G +K+ +P S+E++I IS+ E + PAQ+A
Sbjct: 243 CLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDA 302
Query: 414 LLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEV 472
+L + +RI + DK + +T RLLVPS IGCL G+ GS ++EMR+ TGA I+I E++
Sbjct: 303 VLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQI 362
Query: 473 PACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY---------------------RDF 511
P C DELVQ+ G Q+ +DAL+ +T R+R +
Sbjct: 363 PRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPPHHP 422
Query: 512 FQKETPPSSTG-----PTGSALVVEAASPIDITPAREV--------------------QT 546
Q+ PP TG P S P D+ R Q
Sbjct: 423 RQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPYSYGCEQG 482
Query: 547 VTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTL 606
P S A P+ EA ++ ETV ++ R+ N+V P +
Sbjct: 483 GGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVP--PADFRKGAVAGTNQVATP---SNAT 537
Query: 607 EVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSV 666
EV++P + + + + L +MSGA++++ +P ++ I G P+Q ++AQS+
Sbjct: 538 EVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKKAQSL 597
Query: 667 LQGFILS 673
L FI
Sbjct: 598 LHAFIFC 604
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVT--TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
M + + N S+N A P+ V +R++C + G +IGK GS I++++ TGA
Sbjct: 212 MPDYHARNYSSNMAAPGPR---FFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGA 268
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEE 170
I + E EER+I IS E SPAQ+A+ +H RI ES
Sbjct: 269 SIKIIEPNSDSEERVIVISAH-----ENSEMMHSPAQDAVLRVHSRISESS--------- 314
Query: 171 EEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR 230
+ V R++V H+GCLLGKGG II +MR T IRI
Sbjct: 315 ---------------MDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIF-G 358
Query: 231 DHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ +PRC ++E+VQV G ++++A+ I+ R+R+
Sbjct: 359 NEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 395
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 203/439 (46%), Gaps = 74/439 (16%)
Query: 60 NNSNNRANSNPKDPSLMV---TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N+ N R NS M +T YRILC G VIGK G +IKS+RQ T + I V +
Sbjct: 20 NDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVAD 79
Query: 117 LIPGDEERIIEISDT--------RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG 168
+PG +ER+I I + D + PAQ+ L +H I++ G
Sbjct: 80 AVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDA 139
Query: 169 EEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
+++ R++V+ +G L+GKGG I+++R E+ QI+I
Sbjct: 140 DKKRPQDA------------------RLLVANSQIGSLIGKGGNNIQKLRSESGAQIQI- 180
Query: 229 PRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP 288
PR LP C +E+V + GD VK A+ +S+ L + H P P
Sbjct: 181 PRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFK-------------HPPKEQIP 227
Query: 289 DDDYVPHMNNTARRPS------------MDGARFSGSNYRSNNYG-----PRPSGYSIEA 331
+P N ++ PS + F N + G P GY EA
Sbjct: 228 WSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEA 287
Query: 332 GAA-PMSDSVQPFYG-----------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
G+A P+S+ P + E+ R+LCP DK+G VIG+ ++ ++N+ G
Sbjct: 288 GSAWPLSNPALPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGA 347
Query: 380 DLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
++V D SDE++I +S+ E DD + P EA+L +Q + DKD I+TR LVP
Sbjct: 348 SIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGT-TDKDGAISTRFLVP 406
Query: 440 SSEIGCLEGRDGS-LSEMR 457
S IGCL G+ G+ +SEMR
Sbjct: 407 SKHIGCLLGKGGNIISEMR 425
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 24/195 (12%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE-------- 400
V+R+LCP + +G VIG+ +++ ++ E ++VAD V G DE++I I S
Sbjct: 43 VYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEK 102
Query: 401 -----EGPDDELFPAQEALLHIQTRIV------DLGADKDNIITTRLLVPSSEIGCLEGR 449
+ ++ + PAQ+ LL + + IV D ADK RLLV +S+IG L G+
Sbjct: 103 DDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGK 162
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G+ + ++R +GA IQI ++E+P C DELV I G+ A + AL V+ ++L+
Sbjct: 163 GGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVS----AFLF 218
Query: 509 RDFFQKETPPSSTGP 523
+ +++ P S P
Sbjct: 219 KHPPKEQIPWSVILP 233
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 178/378 (47%), Gaps = 52/378 (13%)
Query: 343 FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG 402
F +++VFRM+C + VG +IG+ + LQ+E G +K+ +P S+E++I IS+ E
Sbjct: 21 FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHEN 80
Query: 403 PDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+ PAQ+A+L + +RI + DK + +T RLLVPS IGCL G+ GS ++EMR+ TG
Sbjct: 81 SEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITG 140
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY------------- 508
A I+I E++P C DELVQ+ G Q+ +DAL+ +T R+R +
Sbjct: 141 AGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPY 200
Query: 509 --------RDFFQKETPPSSTG-----PTGSALVVEAASPIDITPAREV----------- 544
Q+ PP TG P S P D+ R
Sbjct: 201 PPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGAD 260
Query: 545 ---------QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINR 595
Q P S A P+ EA ++ ETV ++ R+ N+
Sbjct: 261 RMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVP--PADFRKGAVAGTNQ 318
Query: 596 VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISG 655
V P + EV++P + + + + L +MSGA++++ +P ++ I G
Sbjct: 319 VATP---SNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICG 375
Query: 656 TPEQVERAQSVLQGFILS 673
P+Q ++AQS+L FI
Sbjct: 376 DPDQTKKAQSLLHAFIFC 393
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 31/208 (14%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
N S+N A P+ + +R++C + G +IGK GS I++++ TGA I + E
Sbjct: 8 NYSSNMAAPGPRF-FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNS 66
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
EER+I IS E SPAQ+A+ +H RI ES
Sbjct: 67 DSEERVIVISAH-----ENSEMMHSPAQDAVLRVHSRISESS------------------ 103
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ V R++V H+GCLLGKGG II +MR T IRI + +PRC
Sbjct: 104 ------MDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIF-GNEQIPRCAQ 156
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRE 267
++E+VQV G ++++A+ I+ R+R+
Sbjct: 157 RNDELVQVTGSFQSIQDALLHITGRIRD 184
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 141/278 (50%), Gaps = 37/278 (13%)
Query: 1 MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN 60
MDRSRSKR Y+YD PR + + G N N++ + +
Sbjct: 1 MDRSRSKRGYHYDQDS--------PPPRSKQRFDRRSGGGGGGQNANSSYHRRGPPSGGG 52
Query: 61 NSNNRA------------------NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIK 102
S+ RA + TT++RILC + KA G +
Sbjct: 53 GSDRRAFLPPDAAPPPPPPPPPSTAAAGGGAGPTTTTSFRILCPECKAYGF---PPGFVA 109
Query: 103 SIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDG 162
+R +GA++ VH GD RIIE D RR+ +GR P FSPAQEAL ++H RILE+
Sbjct: 110 KVRDESGAFVTVHPPFAGDYVRIIETVDGARREADGRPPMFSPAQEALLMVHRRILET-- 167
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETK 222
++ + G G G R G + TR++V ++HVGCLLGKGGKIIEQMRMETK
Sbjct: 168 -----DADDGDEDGEYGPRGKDPRDRG-KTTTRLIVPKLHVGCLLGKGGKIIEQMRMETK 221
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
T IRILPRD PRCVS+SEE+VQ + + + V
Sbjct: 222 THIRILPRDQHTPRCVSLSEEVVQSLEFLRKMNIWVVF 259
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-----SSEEGPD 404
FR+LCP K G G V +++E G + V P G +II +G
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADGRP 147
Query: 405 DELFPAQEALLHIQTRIVDL--------------GADKDN--IITTRLLVPSSEIGCLEG 448
PAQEALL + RI++ G D + TTRL+VP +GCL G
Sbjct: 148 PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRGKTTTRLIVPKLHVGCLLG 207
Query: 449 RDGSLSE-MRRSTGANIQILSREE-VPACVSGTDELVQ 484
+ G + E MR T +I+IL R++ P CVS ++E+VQ
Sbjct: 208 KGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 161/658 (24%), Positives = 273/658 (41%), Gaps = 118/658 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE- 137
T R++CH GG+IG +G ++ +R+ TG I+ + G + ++ I + +
Sbjct: 25 TAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQSI 84
Query: 138 ---GRMPSFS-------------PAQEALFLIHDR----ILESDGGGGFYGEEEEEYGGG 177
R+ FS AQ AL + +R + DGGG GE+EE Y G
Sbjct: 85 LLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG- 143
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
++ R +G +LG GGK +E MR + IR+LP P C
Sbjct: 144 ------------------ILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP----PIC 181
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRES----------QHRDRSHFHGRLHSPDRFF 287
+ ++E++Q+ GD+ VK A+ ++SS ++ + + +S D
Sbjct: 182 GTKNDELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSED--- 238
Query: 288 PDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED 347
P ++ P++ R S+ A SN + P G S E
Sbjct: 239 PHSEFFPNL----RSSSLSNAT---EIVASNRHLPYDGGNSTE---------------RK 276
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+VF+++ G +IG+ I+ LQNE G + V P+ S E+++T+S+ E +
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRY 336
Query: 408 FPAQEALLHIQTRIVDLGADK--------DNIITTRLLVPSSEIGCLEGRDGSLSEMRRS 459
AQ AL + R V++ +K I+ T+LLVPS G E +
Sbjct: 337 SHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGN--REAIIA 394
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY----------- 508
TGA++ I +V +S + +++I GE + AL V+++LR L
Sbjct: 395 TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRAR 454
Query: 509 ----------RDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV 558
R P G +L V AA P D+ R V + H V
Sbjct: 455 VSNPYESAGGRSQIYNLQPSQQDASRGDSLSVSAAVP-DLKMVRSGAEVLKSNSVMHTEV 513
Query: 559 -----QIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDY 613
++ + P +++ +KQ + DV ++ R V + TLE+ +
Sbjct: 514 LKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVSSLPPRSKGVSVRKITLELAVEKD 573
Query: 614 AVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
A+ L + T + ++SGA+V + + P GT+ + ISG PEQ A S+++ +
Sbjct: 574 ALGSLYGRDGTGVDNLQQISGANVDVKD--PTGTEATVLISGNPEQARTAMSLIESIL 629
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------- 397
++ R++C +G +IG + +V L+ E G + PV+GSD ++ I
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 398 --------------SSEEGPDDELFPAQEALLHIQTR--IVDLGADKDNIITTR------ 435
E+ E+ AQ AL+ + R +V D ++
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 436 -LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
+L ++IG + G G ++ MRR++GA I++L P C + DEL+QI G++ A +
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAVK 199
Query: 494 DALVEVTTRLRS 505
ALV V++ +++
Sbjct: 200 KALVMVSSYIQN 211
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 152/279 (54%), Gaps = 38/279 (13%)
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFH------GRLHS---PDRF--FPDDDYVPH 295
+ G V+ A+ ++SS L+++ D ++ G LH P + FP Y
Sbjct: 333 ITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGY--- 389
Query: 296 MNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCP 355
G+ G +Y S Y P +I A + + E++VF++LC
Sbjct: 390 -----------GSSLHGPDYHSRGYSSMPGPENIGANHRMVLE-------EEVVFKLLCH 431
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEG-----PDDELFPA 410
+KVG +IG+ I+ LQ+E G +K+AD SDE+++ IS+ E + + PA
Sbjct: 432 FEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSPA 491
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSR 469
Q+A++ + RI ++G + + RLLV S +IGCL G+ G + SEMRR+TGA+I+I ++
Sbjct: 492 QDAVIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAK 551
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
E+VP C S DELVQ++G +Q+ +DAL +T+R+R ++
Sbjct: 552 EQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRETIF 590
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 25/190 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+++LCH K G +IGK GSII+ ++ TGA I + + P +ER++ IS
Sbjct: 424 VVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTN 483
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
SPAQ+A+ +H RI E GF G VA R++V
Sbjct: 484 XEQKHSPAQDAVIRVHCRIAEI-----------------------GFEPGAAVVA-RLLV 519
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GCLLGKGG II +MR T IRI ++ +P+C S ++E+VQV+G + +V++A+
Sbjct: 520 HSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQ-VPKCGSQNDELVQVIGSLQSVQDAL 578
Query: 259 AIISSRLRES 268
I+SR+RE+
Sbjct: 579 FCITSRIRET 588
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 43/194 (22%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGR 139
+RILC K GGVIGK G+II+ R+ TGA I + + + G +ER+I I +D + E
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 140 MPS---------------------------FSPAQEALFLIHDRILESDGGGGFYGEEEE 172
SPAQ+AL + +RIL+ D ++E+
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
G V R++ VGC+LG+GGKI+E++R E+ QIR+LP+DH
Sbjct: 178 L--------------GNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDH 223
Query: 233 SLPRCVSMSEEIVQ 246
+P C S +E++Q
Sbjct: 224 -IPACASPGDELIQ 236
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 44/181 (24%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
++FR+LCP K G VIG+ I+ + + G +++ D V G DE++I I
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 398 -------------------SSEEGP----DDELFPAQEALLHIQTRIVDL---------G 425
+S P DDE PAQ+AL+ + RI+ +
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 426 ADKDNI-ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELV 483
D N+ + RLL PS+++GC+ GR G + E +R+ +GA I++L ++ +PAC S DEL+
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 484 Q 484
Q
Sbjct: 236 Q 236
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P +T +T+EV +P + + ++ + L + ++SGA V + + + ++ ++ +SGTP+
Sbjct: 727 PNITXTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPD 786
Query: 659 QVERAQSVLQGFILSTQ 675
Q AQS++Q FILS Q
Sbjct: 787 QTRAAQSLVQAFILSEQ 803
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 149/278 (53%), Gaps = 29/278 (10%)
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF-HGRLHSPDRFFPDDDYV--- 293
+ M+ ++ G + + A+ ++S+ L+++ D S+F GR F P V
Sbjct: 61 LPMASPDSEISGSFSAARKALLLVSTCLQDNPRPDTSNFPSGR-----PFGPPGSGVGCP 115
Query: 294 PHMNNTARR---PSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF 350
P ++ ++R P + N+ SN P P F +++VF
Sbjct: 116 PGVDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRF----------------FVEQEIVF 159
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
RM+C D VG VIG+ + LQ+E G +KV DPV SDE+II IS+ E + P+
Sbjct: 160 RMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPS 219
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSR 469
Q+ALL + ++I + DK + + RLLVP+ IGCL G+ GS ++EMR+ TGA+I+I
Sbjct: 220 QDALLRVYSKISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGN 279
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
E++P C DELVQ+ G Q+ +DAL+ +T R+R +
Sbjct: 280 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLI 317
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 30/187 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++C + GGVIGK GS I++++ TGA + V + + +ERII IS R R
Sbjct: 159 FRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVIS-ARENSEMMR- 216
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
SP+Q+AL ++ +I E+ + V R++V
Sbjct: 217 ---SPSQDALLRVYSKISEAS------------------------MDKSSSVPARLLVPA 249
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
H+GCLLGKGG II +MR T IRI + +PRC ++E+VQV G ++++A+
Sbjct: 250 QHIGCLLGKGGSIIAEMRKLTGASIRIF-GNEQIPRCAQRNDELVQVTGSFQSIQDALLH 308
Query: 261 ISSRLRE 267
I+ R+R+
Sbjct: 309 ITGRIRD 315
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
A P+ +A S+ +TV + R+ + N+V P T T EVV+P + +
Sbjct: 419 APEAPATDAPRSMPDTVP--AVDFRKGPVSSENQVATPATT--TTEVVIPCKYIGFVCGT 474
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFIL 672
+ + L ++SGA++++ + +P T + I G PEQ ++AQS++ FI
Sbjct: 475 NGSDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAFIF 525
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 237/509 (46%), Gaps = 83/509 (16%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
NN+ S N R + + + +V YRILC GGVIGKSG +I +IR +T A I
Sbjct: 13 NNSESNRNQKRRISHDKINRDELVV--YRILCPIDVVGGVIGKSGKVINAIRHNTKAKIK 70
Query: 114 VHELIPGDEERIIEISDTRRRDPE--GRMPS----FSPAQEALFLIHDRILESDGGGGFY 167
V + + G +R+I I + + E G S AQ+AL ++D I+ SD
Sbjct: 71 VFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASD------ 124
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
EE V + R++V L+GK G+ I+++R T+ +++
Sbjct: 125 ----EENNTKTNVDRDDNK------ECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 228 LPRDHSLPR--CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------------ 273
+ +D S P C + +V + G+ +VK A+ +S+ + + R+
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPA 234
Query: 274 ------SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR----FSGSNYRSNNYGPR 323
S ++ F+ + D++ + A PS A F G Y P
Sbjct: 235 ASVIVPSDLSNSVYPQTGFYSNQDHI--LQQGAGVPSYFNALSVSDFQG--YAETAANPV 290
Query: 324 PSGYSIEAGAAPMSDSVQPFYG----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P + A + P++ F G E+LVF++LCP+ + RVIG+ ++ ++ G
Sbjct: 291 P----VFASSLPVT---HGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGS 343
Query: 380 DLKVADPVD--GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
++V D G DE +I +++ E PDD A EA+L +Q I D A+ + +LL
Sbjct: 344 CIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN---VKMQLL 400
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARD 494
V S IGC+ G+ GS ++E+R+ T ANI C+S D+LV++ GE+ + RD
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRD 450
Query: 495 ALVEVTTRLRSYLY--RDFFQKETPPSST 521
AL+++ RLR + +D PP+ T
Sbjct: 451 ALIQIVLRLREDVLGDKDSVATRKPPART 479
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 48/328 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE----- 400
E +V+R+LCPID VG VIG+S ++ +++ +KV D + G +++ITI
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 93
Query: 401 ------EGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCL 446
+ ++ L AQ+ALL + IV D+D+ RLLVP S+ L
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 153
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ G ++ +RR T A+++++S++ C D +V I GE ++ + AL V+
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVS-- 211
Query: 503 LRSYLYRDFFQKETPPSSTG---PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQ 559
+ +Y+ ++ P ST P S +V P D++ + QT + +
Sbjct: 212 --AIMYKINPRENIPLDSTSQDVPAASVIV-----PSDLSNSVYPQT---GFYSNQDHIL 261
Query: 560 IPATSQPSKEAAGSVSETVKQNESERRED-VPTVINRVPLPL----VTRS---TLEVVLP 611
PS A SVS+ Q +E + VP + +P+ +RS +V+ P
Sbjct: 262 QQGAGVPSYFNALSVSDF--QGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 319
Query: 612 DYAVPKLITKSKTLLTRFSEMSGASVSL 639
+ ++I K + + R E SG+ + +
Sbjct: 320 LCNIMRVIGKGGSTIKRIREASGSCIEV 347
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 52/263 (19%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDPE 137
+++LC VIGK GS IK IR+ +G+ I V++ GD+E +I ++ T D
Sbjct: 313 VFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM 372
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
M A EA+ L+ + I + D V +++
Sbjct: 373 KSM-----AVEAVLLLQEYINDEDA---------------------------ENVKMQLL 400
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS--MSEEIVQVVGDINNVK 255
VS +GC++GK G +I ++R T I C+S +++V+V G++++V+
Sbjct: 401 VSSKVIGCVIGKSGSVINEIRKRTNANI-----------CISKGKKDDLVEVSGEVSSVR 449
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR-PSMDGARFSGSN 314
+A+ I RLRE D+ R P + ++ +N PS + S S
Sbjct: 450 DALIQIVLRLREDVLGDKDSVATR--KPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSG 507
Query: 315 YRSNNYGPRPSGYSIEAGAAPMS 337
+ + YG P+G ++ P S
Sbjct: 508 F--HGYGSFPAGDNVLGSTGPYS 528
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 222/452 (49%), Gaps = 39/452 (8%)
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRL--HSPDRFFPDDDYVPHMNNT 299
+ V + GD VK A+ IS+ + + R+ + P P D VP
Sbjct: 4 DNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSD--VPIYPAG 61
Query: 300 ARRPSMDGARFSGS--NYRSNNYGPRPSGYSIEAGAAPMSDSVQPF---YG----EDLVF 350
PS D + S + + P GYS P+ S P YG E+L+
Sbjct: 62 GFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELII 121
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+LCP DK+GRVIG ++ ++ G ++V D DE +IT++S E DD A
Sbjct: 122 RVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMA 181
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSR 469
EA+L +Q +I D + D+ + RLLVPS IGC+ G+ GS ++E+R+ T A+++I S+
Sbjct: 182 VEAVLLLQAKIND---EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI-SK 237
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPT----- 524
E P C DEL+++VGE+ + RDALV++ RLR +D ++T +++ T
Sbjct: 238 SERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKD---RDTGHNTSAGTDSLYS 294
Query: 525 -GSALVVEAASPIDITPAREVQTVT-DPPAATHQSVQIPATSQPSKEAAGSVSETVKQNE 582
G+ L V + P A V ++ D A T + + ++S + SV E +
Sbjct: 295 GGAGLSVSSVLP----SAPPVAPLSYDQRAETGSGLGLLSSSSLYGYGSLSVGENAYGSM 350
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
S + +P P ST ++V+P AV K++ K + ++SGA + + +
Sbjct: 351 SSYSS---KLYGGLPTP----STFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDS 403
Query: 643 QPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
+ ++ ISGTPEQ A++++Q FI++T
Sbjct: 404 KSSRGDRVALISGTPEQKRTAENLIQAFIMAT 435
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 34/206 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC K G VIG+ GS IKS+R+ +GA + V + +E +I ++ T D M
Sbjct: 122 RVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSM- 180
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A EA+ L+ +I + D + VA R++V
Sbjct: 181 ----AVEAVLLLQAKINDEDD---------------------------DTVAIRLLVPSK 209
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GC++GK G II ++R T+ +RI + P+C ++E+++VVG++ +V++A+ I
Sbjct: 210 IIGCIIGKSGSIINEIRKRTRADVRISKSER--PKCADANDELIEVVGEVGSVRDALVQI 267
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFF 287
RLR+ +DR H D +
Sbjct: 268 VLRLRDDALKDRDTGHNTSAGTDSLY 293
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 357 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 416
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 417 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 476
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 477 LHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 536
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 537 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 596
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
GE R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 597 TGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 641
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 642 RQSDNPLSIGSHQSVSNPATNSSS 665
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 454 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV--TASENPECQS 511
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 512 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 548
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ G+ NV+ A+
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITGEFPNVREAI 607
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 608 FHITSRLRDS 617
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 146
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 147 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDE 199
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 200 MVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ-KIIQISGTPE 658
+VT +T+E+ +P A+ + + L + ++SGA V ++ P GT +II ISGTP+
Sbjct: 772 IVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARV-IIHEPPLGTSDRIIVISGTPD 830
Query: 659 QVERAQSVLQGFILS 673
Q + AQ++L FIL+
Sbjct: 831 QTQAAQNLLHAFILT 845
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 357 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 416
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 417 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 476
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 477 LHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 536
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 537 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 596
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
GE R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 597 TGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 641
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 642 RQSDNPLSIGSHQSVSNPATNSSS 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 454 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV--TASENPECQS 511
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 512 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 548
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ G+ NV+ A+
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITGEFPNVREAI 607
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 608 FHITSRLRDS 617
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 146
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 147 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDE 199
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 200 MVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ-KIIQISGTPE 658
+VT +T+E+ +P A+ + + L + ++SGA V ++ P GT +II ISGTP+
Sbjct: 781 IVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARV-IIHEPPLGTSDRIIVISGTPD 839
Query: 659 QVERAQSVLQGFILS 673
Q + AQ++L FIL+
Sbjct: 840 QTQAAQNLLHAFILT 854
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 357 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 416
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 417 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 476
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 477 LHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 536
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 537 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 596
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
GE R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 597 TGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 641
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 642 RQSDNPLSIGSHQSVSNPATNSSS 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 454 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV--TASENPECQS 511
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 512 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 548
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ G+ NV+ A+
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITGEFPNVREAI 607
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 608 FHITSRLRDS 617
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 146
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 147 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDE 199
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 200 MVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 357 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 416
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 417 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 476
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 477 LHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 536
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 537 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 596
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
GE R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 597 TGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 641
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 642 RQSDNPLSIGSHQSVSNPATNSSS 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 454 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV--TASENPECQS 511
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 512 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 548
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ G+ NV+ A+
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITGEFPNVREAI 607
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 608 FHITSRLRDS 617
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 146
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 147 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDE 199
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 200 MVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 163/675 (24%), Positives = 278/675 (41%), Gaps = 135/675 (20%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE- 137
T R++CH GG+IG +G ++ +R+ TG I+ + G + ++ I + +
Sbjct: 25 TAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQSI 84
Query: 138 ---GRMPSFS-------------PAQEALFLIHDR----ILESDGGGGFYGEEEEEYGGG 177
R+ FS AQ AL + +R + DGGG GE+EE Y G
Sbjct: 85 LLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG- 143
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
++ R +G +LG GGK +E MR + IR+LP P C
Sbjct: 144 ------------------ILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP----PIC 181
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRES----------QHRDRSHFHGRLHSPDRFF 287
+ ++E++Q+ GD+ VK A+ ++SS ++ + + +S D
Sbjct: 182 GTKNDELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSED--- 238
Query: 288 PDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED 347
P ++ P++ R S+ A SN + P G S E
Sbjct: 239 PHSEFFPNL----RSSSLSNAT---EIVASNRHLPYDGGNSTE---------------RK 276
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+VF+++ G +IG+ I+ LQNE G + V P+ S E+++T+S+ E +
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRY 336
Query: 408 FPAQEALLHIQTRIVDLGADKD--------NIITTRLLVPSSEIGCLEGRDGSLSEMRRS 459
AQ AL + R V++ +K I+ T+LLVPS G E +
Sbjct: 337 SHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR--EAIIA 394
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY----------- 508
TGA++ I +V +S + +++I GE + AL V+++LR L
Sbjct: 395 TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRAR 454
Query: 509 --------------RDFFQKETPPSSTGPT----GSALVVEAASPIDITPAREVQTVTDP 550
+ + P +S P G +L V AA P D+ R V
Sbjct: 455 VSNPYESAGGRSQIYNLQPSQQPSNSIKPQDASRGDSLSVSAAVP-DLKMVRSGAEVLKS 513
Query: 551 PAATHQSV-----QIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPL----- 600
+ H V ++ + P +++ +KQ + DV ++ R L
Sbjct: 514 NSVMHTEVLKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVSSLPPRSVLAKQQRRS 573
Query: 601 ----VTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGT 656
V + TLE+ + A+ L + T + ++SGA+V + + P GT+ + ISG
Sbjct: 574 KGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKD--PTGTEATVLISGN 631
Query: 657 PEQVERAQSVLQGFI 671
PEQ A S+++ +
Sbjct: 632 PEQARTAMSLIESIL 646
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------- 397
++ R++C +G +IG + +V L+ E G + PV+GSD ++ I
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 398 --------------SSEEGPDDELFPAQEALLHIQTR--IVDLGADKDNIITTR------ 435
E+ E+ AQ AL+ + R +V D ++
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 436 -LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
+L ++IG + G G ++ MRR++GA I++L P C + DEL+QI G++ A +
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAVK 199
Query: 494 DALVEVTTRLRS 505
ALV V++ +++
Sbjct: 200 KALVMVSSYIQN 211
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 369 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 428
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 429 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 488
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 489 LHSETGAFINVGNALDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 548
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 549 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 608
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
E R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 609 TEEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 653
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 654 RQSDNPLSIGSHQSVSNPATNSSS 677
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 466 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV--TASENPECQS 523
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 524 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 560
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ + NV+ A+
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITEEFPNVREAI 619
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 620 FHITSRLRDS 629
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 146
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 147 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDE 199
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 200 MVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ-KIIQISGTPE 658
+VT +T+E+ +P A+ + + L + ++SGA V ++ P GT +II ISGTP+
Sbjct: 784 IVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARV-IIHEPPLGTSDRIIVISGTPD 842
Query: 659 QVERAQSVLQGFILS 673
Q + AQ++L FIL+
Sbjct: 843 QTQAAQNLLHAFILT 857
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 40/324 (12%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QHR+R H LH P P D + R RP + + R ++Y ++ Y
Sbjct: 369 QHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRY 428
Query: 321 GP---RPSGYSIEAGAAPMSDSVQP-----FYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
P ++ A A + P +D+VF++LC + G VIG +V +
Sbjct: 429 STLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRM 488
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN 430
L +E G + V + +D +E++I +++ E P+ + PAQ+A++ I +R+ +L +K DN
Sbjct: 489 LHSETGAFINVGNALDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDN 548
Query: 431 ----IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQI 485
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P C+S D++VQI
Sbjct: 549 GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQI 608
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ 545
E R+A+ +T+RLR ++ + + SS SAL E R
Sbjct: 609 TEEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS-----SALTTE----------RFYD 653
Query: 546 TVTDPPAA--THQSVQIPATSQPS 567
+D P + +HQSV PAT+ S
Sbjct: 654 RQSDNPLSIGSHQSVSNPATNSSS 677
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I + T +PE +
Sbjct: 466 FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV--TASENPECQS 523
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ LI R+ E + G R + R+VV
Sbjct: 524 ---SPAQKAIMLIFSRLFE--------------------LATNKILDNGPRSSITARLVV 560
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+C+S ++++VQ+ + NV+ A+
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQN-PKCISENDQVVQITEEFPNVREAI 619
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 620 FHITSRLRDS 629
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 166
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ G + +R+ TG I I E +P C DE+V++ G A + ALV ++ L+
Sbjct: 167 KGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 56/232 (24%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 135
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 47 AAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRV 106
Query: 136 PEG-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVG 181
G S AQ AL + + + E+D
Sbjct: 107 KLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD-------------------- 146
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C
Sbjct: 147 -------SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTD 197
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+E+V+V G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 198 DEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 169/367 (46%), Gaps = 55/367 (14%)
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
+ VG +IG+ + LQ+E G +K+ + V SDE+++ IS+ E D PAQ+A++
Sbjct: 6 EMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVR 65
Query: 417 IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPAC 475
+ +RI + D+ + RLLVPS IGCL G+ GS ++EMR+ TGA+I+I E++P C
Sbjct: 66 VYSRISEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPRC 125
Query: 476 VSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF-------------------QKET 516
DE+VQ+ G Q+ +DAL+ +T R+R + ++E
Sbjct: 126 AQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEP 185
Query: 517 PPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATH-----------------QSVQ 559
PP P+G S P +T P H Q
Sbjct: 186 PPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPPVHSMEYMGADRMPYSYGGEQGGP 245
Query: 560 IPATSQPSKEAAGSVSETVKQNESERREDVPTVI-------------NRVPLPLVTRSTL 606
P QPS + + SE ++P + N+V P T +T
Sbjct: 246 RPFLEQPSPR---TWPPEAPRTNSEAPRNMPDAVLATDLRKGPVASENQVATP--TSTTT 300
Query: 607 EVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSV 666
EVV+P + + S + + +MSGAS+++ + +P T I+ I G PEQ ++AQS+
Sbjct: 301 EVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICGDPEQTKKAQSL 360
Query: 667 LQGFILS 673
+ FI
Sbjct: 361 IHAFIFC 367
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 159/396 (40%), Gaps = 97/396 (24%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS 142
I+ ++M G +IGK GS I++++ TGA I + EL+ +ER++ IS D
Sbjct: 2 IILNEM-VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDM-----M 55
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
SPAQ+A+ ++ RI E+ + R++V H
Sbjct: 56 HSPAQDAVVRVYSRISEAS------------------------MDRSSPTPARLLVPSQH 91
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
+GCLLGKGG II +MR T IRI + +PRC ++E+VQV G ++++A+ I+
Sbjct: 92 IGCLLGKGGSIITEMRKITGASIRIF-GNEQIPRCAQRNDEMVQVTGSFQSIQDALLHIT 150
Query: 263 SRLRE---------------------SQHRDRS-----HFH---GRLHSPDRFFPDDDYV 293
R+R+ H+ R H H G P F D +
Sbjct: 151 GRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPM 210
Query: 294 PHMNNTARR-PSMDGARFSGSNYRSNNYG------------PRPSGYSIEA----GAAP- 335
H R P + + G++ +YG P P + EA AP
Sbjct: 211 GHFETGDHRPPPVHSMEYMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPR 270
Query: 336 -MSDSVQ-------PFYGEDLVF-------RMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
M D+V P E+ V ++ P +G V G S +E ++ G
Sbjct: 271 NMPDAVLATDLRKGPVASENQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGAS 330
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
+ V DP G I+ I D E ++L+H
Sbjct: 331 ITVHDPKPGDTNSIVVICG----DPEQTKKAQSLIH 362
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
+TT ++ G V G SGS I+ IRQ +GA I VH+ PGD I+ I DPE
Sbjct: 297 STTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICG----DPE 352
Query: 138 GRMPSFSPAQEALFLIHDRIL 158
++A LIH I
Sbjct: 353 Q-------TKKAQSLIHAFIF 366
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 194/430 (45%), Gaps = 76/430 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+R++CH K G +IG SGS+I IR TG ++ E + G E R I ++ + PE
Sbjct: 26 VAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSA--SPER 83
Query: 139 RMP-------SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
++ S AQEA+ + +R+ E D G + E Y G
Sbjct: 84 KIAVGEDETVEVSAAQEAVVRVLERMWEVDAVKD--GGDCEGYCG--------------- 126
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
++ + +G ++G+ G+ I++M+ + I ILP P C ++++Q+ G
Sbjct: 127 ----LLANTSQIGAVVGREGRNIKRMKRASGAHIWILPA----PLCALKEDQLIQITGSS 178
Query: 252 N-NVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFF------PDDDYVPHMNNTARRPS 304
VK AV I+S L++ ++ L + R P ++ PH+ +
Sbjct: 179 TVAVKKAVIAITSCLQDCPPYEKDEVDLSLEAVRRRRSGSSGDPHAEFFPHLCSLL---- 234
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
Y N A D +P + FRM+CP G +IG
Sbjct: 235 --------PTYSEN--------------IATDKDHKKPNEQLQVQFRMICPHGAAGSIIG 272
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD- 423
+ +V LQN+ G + +A P+ SD +++T+S+ E + PAQ ALL + R ++
Sbjct: 273 KGGSVVRALQNQTGASIILAPPITNSDGRLVTVSALENLESSHSPAQNALLLVFARSIEH 332
Query: 424 -------LGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPAC 475
LG ++ +T LL+PS+ + CL R G + SEM +TGA+IQIL ++ C
Sbjct: 333 DIERARSLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMIETTGADIQILQGDQFFYC 392
Query: 476 VSGTDELVQI 485
S D ++Q+
Sbjct: 393 ASNNDVVLQV 402
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD-- 405
+ FR++C K+G +IG S ++ ++ E G + + V GS+ + I ++ P+
Sbjct: 26 VAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPERKI 85
Query: 406 --------ELFPAQEALLHIQTRIVDLGADKDNIIT---TRLLVPSSEIGCLEGRDG-SL 453
E+ AQEA++ + R+ ++ A KD LL +S+IG + GR+G ++
Sbjct: 86 AVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLANTSQIGAVVGREGRNI 145
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVG-EIQAARDALVEVTTRLR 504
M+R++GA+I IL P C D+L+QI G A + A++ +T+ L+
Sbjct: 146 KRMKRASGAHIWILP---APLCALKEDQLIQITGSSTVAVKKAVIAITSCLQ 194
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
+ N + + K P+ + +R++C AG +IGK GS++++++ TGA I + I
Sbjct: 238 SENIATDKDHKKPNEQLQVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITN 297
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
+ R++ +S E S SPAQ AL L+ R +E D EE
Sbjct: 298 SDGRLVTVSAL-----ENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEI------ 346
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
V +++ V CL+ +GG+I +M T I+IL D C S
Sbjct: 347 ----------TVTATLLLPSNRVSCLIERGGRIDSEMIETTGADIQILQGDQFF-YCASN 395
Query: 241 SEEIVQV 247
++ ++QV
Sbjct: 396 NDVVLQV 402
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 164/305 (53%), Gaps = 40/305 (13%)
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDR-------SHFH---GRLHSPDRFFPDDD 291
+E++Q+ G+ + VK A+ IS+RL ++ R + S+ H G L P+ P
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQSGGSLTGPNAGAPIVG 60
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
P M G+ + N + P P DSV ++ R
Sbjct: 61 LAPLMGPYGGYKGDTGSEWP------NAFYPAPR------------DSVS---AKEFSLR 99
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
++CP +G VIG+ +++ ++ E G +KV +D+ II+ISS+E +D + P
Sbjct: 100 LVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTI 159
Query: 412 EALLHIQTRIVDLGADK---DNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQIL 467
+A + +Q + + +D+ D+ TTRLLVP+S IGCL G+ GS+ SEMR+ T ANI+IL
Sbjct: 160 DAAVRLQPKCSE-KSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRIL 218
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSA 527
S+E +P S DE+VQI G++ AR+AL++VTTRL++ +FF++E S+ P S
Sbjct: 219 SKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKT----NFFEREGALSAFPPPLSY 274
Query: 528 LVVEA 532
L + A
Sbjct: 275 LPMSA 279
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
P+D + R++C GGVIGK GS+IK IRQ +GA+I V ++ II IS
Sbjct: 87 PRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISIS 146
Query: 130 DTRR-RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
DP SP +A + + E + + E G
Sbjct: 147 SKEFFEDP------ISPTIDAAVRLQPKCSE---------KSDRE-------------SG 178
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
+ TR++V +GCL+GKGG II +MR TK IRIL +++ LP+ S +E+VQ+
Sbjct: 179 DSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKEN-LPKVASEDDEMVQIT 237
Query: 249 GDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP 294
GD++ +NA+ +++RL +++F R + F P Y+P
Sbjct: 238 GDLDVARNALIQVTTRL-------KTNFFEREGALSAFPPPLSYLP 276
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 237/523 (45%), Gaps = 97/523 (18%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
NN+ S N R + + + +V YRILC GGVIGKSG +I +IR +T A I
Sbjct: 321 NNSESNRNQKRRISHDKINRDELVV--YRILCPIDVVGGVIGKSGKVINAIRHNTKAKIK 378
Query: 114 VHELIPGDEERIIEISDTRRRDPE--GRMPS----FSPAQEALFLIHDRILESDGGGGFY 167
V + + G +R+I I + + E G S AQ+AL ++D I+ SD
Sbjct: 379 VFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASD------ 432
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
EE V + R++V L+GK G+ I+++R T+ +++
Sbjct: 433 ----EENNTKTNVDRDDNK------ECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 482
Query: 228 LPRDHSLPR--CVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDR------------ 273
+ +D S P C + +V + G+ +VK A+ +S+ + + R+
Sbjct: 483 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPA 542
Query: 274 ------SHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR----FSGSNYRSNNYGPR 323
S ++ F+ + D++ + A PS A F G Y P
Sbjct: 543 ASVIVPSDLSNSVYPQTGFYSNQDHI--LQQGAGVPSYFNALSVSDFQG--YAETAANPV 598
Query: 324 PSGYSIEAGAAPMSDSVQPFYG----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P + A + P++ F G E+LVF++LCP+ + RVIG+ ++ ++ G
Sbjct: 599 P----VFASSLPVT---HGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGS 651
Query: 380 DLKVADPVD--GSDEQIITISSEE--------------GPDDELFPAQEALLHIQTRIVD 423
++V D G DE +I +++ E PDD A EA+L +Q I D
Sbjct: 652 CIEVNDSRTKCGDDECVIIVTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYIND 711
Query: 424 LGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSG--TD 480
A+ + +LLV S IGC+ G+ GS ++E+R+ T ANI C+S D
Sbjct: 712 EDAEN---VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANI----------CISKGKKD 758
Query: 481 ELVQIVGEIQAARDALVEVTTRLRSYLY--RDFFQKETPPSST 521
+LV++ GE+ + RDAL+++ RLR + +D PP+ T
Sbjct: 759 DLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPART 801
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 48/328 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE----- 400
E +V+R+LCPID VG VIG+S ++ +++ +KV D + G +++ITI
Sbjct: 342 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 401
Query: 401 ------EGPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCL 446
+ ++ L AQ+ALL + IV D+D+ RLLVP S+ L
Sbjct: 402 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 461
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVP---ACVSGTDELVQIVGEIQAARDALVEVTTR 502
G+ G ++ +RR T A+++++S++ C D +V I GE ++ + AL V+
Sbjct: 462 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVS-- 519
Query: 503 LRSYLYRDFFQKETPPSSTG---PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQ 559
+ +Y+ ++ P ST P S +V P D++ + QT + +
Sbjct: 520 --AIMYKINPRENIPLDSTSQDVPAASVIV-----PSDLSNSVYPQT---GFYSNQDHIL 569
Query: 560 IPATSQPSKEAAGSVSETVKQNESERRED-VPTVINRVPLPL----VTRS---TLEVVLP 611
PS A SVS+ Q +E + VP + +P+ +RS +V+ P
Sbjct: 570 QQGAGVPSYFNALSVSDF--QGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 627
Query: 612 DYAVPKLITKSKTLLTRFSEMSGASVSL 639
+ ++I K + + R E SG+ + +
Sbjct: 628 LCNIMRVIGKGGSTIKRIREASGSCIEV 655
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 161/305 (52%), Gaps = 25/305 (8%)
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR----RP----SMDGARFSGSNYRSNNY 320
QH++R H LH P P D + R RP + R ++Y ++ Y
Sbjct: 367 QHKERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETIPQETLRRQSADYLAHRY 426
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGE------DLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ + + + S++P E D+VF++LC + G VIG +V +L
Sbjct: 427 SILDTHSITTSASIANTASMKPPPSEVEVGNQDVVFKILCSTENAGGVIGSGGKVVRMLH 486
Query: 375 NEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--DN-- 430
+E G + V + + +E++I +++ E P+ + PAQ+A++ + +R+ +L K DN
Sbjct: 487 SETGAFINVGNTLADCEERLIAVTAPENPECQSSPAQKAIMLLFSRLFELSTKKILDNGP 546
Query: 431 --IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
IT RL+VP+S+IGC+ G+ G + SEMR++TGA IQIL E+ P CVS D+++QI G
Sbjct: 547 RTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITG 606
Query: 488 EIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALV-VEAASPIDITPAREVQT 546
E R+A+ +T+RLR ++ + + SS+ T + ++ +P+ I Q+
Sbjct: 607 EFPNVREAIFHITSRLRDSVFSNSMKNSITKSSSALTTERIYHRQSDNPLSIGSH---QS 663
Query: 547 VTDPP 551
V++PP
Sbjct: 664 VSNPP 668
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 28/190 (14%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
++ILC AGGVIG G +++ + TGA+INV + EER+I ++ PE
Sbjct: 462 FKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTA-----PENPE 516
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VATRMVV 198
SPAQ+A+ L+ R+ E + G R + R+VV
Sbjct: 517 CQSSPAQKAIMLLFSRLFE--------------------LSTKKILDNGPRTSITARLVV 556
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+GC+LGKGG I+ +MR T I+IL + + P+CVS +++++Q+ G+ NV+ A+
Sbjct: 557 PTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQN-PKCVSENDQVIQITGEFPNVREAI 615
Query: 259 AIISSRLRES 268
I+SRLR+S
Sbjct: 616 FHITSRLRDS 625
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL-- 407
FR+LCP+ VG VIG+S +++ LQ G ++V +P GS +++ITI ++ +
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 408 -------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
AQ AL+ + ++ AD D ++ RLL SS G + G
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKV-FELLAAEADSDTVV-CRLLTESSHAGAVIG 164
Query: 449 RDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
+ G + +R+ TG I I + E +P C DE+V+I G A + ALV ++ L++
Sbjct: 165 KGGQMVGSIRKETGCKISIRT-ENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQN 221
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 56/230 (24%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 137
+R+LC G VIGKSG++IK ++Q TGA I V E G +R+I I +D++ R
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 138 G-------------RMPSFSPAQEALFLIHDRI-LESDGGGGFYGEEEEEYGGGGGVGGG 183
G S AQ AL + + + E+D
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD---------------------- 144
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ V R++ H G ++GKGG+++ +R ET +I I R +LP C +E
Sbjct: 145 -----SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RTENLPICADTDDE 197
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDR----------SHFHGRLHSP 283
+V++ G+ VK A+ IS L+ Q D+ F LH P
Sbjct: 198 MVEIEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 247
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ-KIIQISGTPE 658
+VT +T+E+ +P+ A+ + + L + ++SGA V +V P GT +II ISGTP+
Sbjct: 780 IVTNTTVEIRVPENAMSFVYGEQGYNLEQLRQISGARV-IVHEPPLGTSDRIIVISGTPD 838
Query: 659 QVERAQSVLQGFILS 673
Q + AQ++L FIL+
Sbjct: 839 QTQAAQNLLHAFILT 853
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 159/661 (24%), Positives = 273/661 (41%), Gaps = 123/661 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE- 137
T R++CH GG+IG +G ++ +R+ TG I+ + G + ++ I + +
Sbjct: 25 TAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNKSV 84
Query: 138 ---GRMPSF-------------SPAQEALFLIHDR----ILESDGGGGFYGEEEEEYGGG 177
R+ F S AQ AL + +R + DGGG GE+EE Y G
Sbjct: 85 LLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG- 143
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
++ R +G +LG GGK +E MR + IR+LP P C
Sbjct: 144 ------------------ILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP----PIC 181
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRD-----------RSHFHGRLHSP-DR 285
+ ++E++Q+ GD+ VK A+ ++S+ ++++ + S G P
Sbjct: 182 GTNTDELIQITGDVLAVKKALVMVSTCIQDNPPVNGYPQPLCIKAYESSTDGNSEDPHSE 241
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG 345
FFP+ R S+ A S S+ R P+ Y G
Sbjct: 242 FFPN-----------LRSSVPNASDSASSNRH-----LPAVYDEGNGTE----------- 274
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+VF+++ G +IG+ I+ LQNE G + + P+ S E+++TIS+ E +
Sbjct: 275 RKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLES 334
Query: 406 ELFPAQEALLHIQTRIVDLGADK--------DNIITTRLLVPSSEIGCLEGRDGSLSEMR 457
AQ AL + R V++ +K ++ T+LLVPS L G E
Sbjct: 335 RYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGN--REAI 392
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE-- 515
+TGA++ I ++ +S + +++I GE + AL V+++LR L E
Sbjct: 393 IATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLGEMR 452
Query: 516 ----TPPSSTGPT--------------GSALVVEAASPIDITPAREVQTVTDPPAATHQS 557
P S G + G +L V + R V + H
Sbjct: 453 ARVSNPYESAGTSQIYNLKQSQQNSSRGDSLSVSDGEQ-NFKMVRSGAEVMKLNSVMHTE 511
Query: 558 V-----QIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRS-TLEVVLP 611
V ++ + P +++ +KQ + R DV ++ R + R TLE+ +
Sbjct: 512 VLKEVDELKGFTLPQSLLEDDLTQEMKQLQMSRNGDVSSLPQRRGKGVYVRKITLELTVE 571
Query: 612 DYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQK-IIQISGTPEQVERAQSVLQGF 670
A+ L + T + ++SGA V + + P G + ++ ISG PEQ A S+++
Sbjct: 572 KDALGSLYGRDGTGVDNLRQISGAGVDVKD--PTGIEATVLIISGNPEQTRTAMSLIESI 629
Query: 671 I 671
+
Sbjct: 630 L 630
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 37/254 (14%)
Query: 27 PRYNHYYQPNNNYRHRGNNNNNTNN-----IMNNNTSINNSNNRANSNPKDPSLM----- 76
P N Y QP + + + N+ + N +S+ N+++ A+SN P++
Sbjct: 213 PPVNGYPQPLCIKAYESSTDGNSEDPHSEFFPNLRSSVPNASDSASSNRHLPAVYDEGNG 272
Query: 77 --VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
++I+ + AGG+IGK G+II++++ TGA I++ + ER++ IS R
Sbjct: 273 TERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTIS--ARE 330
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+ E R +S AQ AL L+ R +E D E G G+ G V T
Sbjct: 331 NLESR---YSHAQNALALVFARSVEID----------VEKGLRPGLHNGAV------VKT 371
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+++V L+G G + + + T + I P D+ + +S +E ++++ G+ +V
Sbjct: 372 KLLVPSQFANSLVGNGNR---EAIIATGADVHI-PVDNQILEWISENEVVIEIKGEYGHV 427
Query: 255 KNAVAIISSRLRES 268
+ A+ +SS+LRE+
Sbjct: 428 QKALTHVSSKLREN 441
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI-------- 397
++ R++C +G +IG + +V L+ E G + PV+GSD ++ I
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNK 82
Query: 398 --------------SSEEGPDDELFPAQEALLHIQTR--IVDLGADKDNIITTR------ 435
E+ ++ AQ AL+ + R +V D ++
Sbjct: 83 SVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYC 142
Query: 436 -LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
+L ++IG + G G ++ MRRS+GA I++L P C + TDEL+QI G++ A +
Sbjct: 143 GILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVLAVK 199
Query: 494 DALVEVTTRLR 504
ALV V+T ++
Sbjct: 200 KALVMVSTCIQ 210
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 214/459 (46%), Gaps = 63/459 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI------------ 128
+RIL H + G VIGK G +I+ +++ T + I V + R+I I
Sbjct: 26 FRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRVKL 85
Query: 129 -------SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVG 181
S+ ++ + + + S AQ AL R+ E+
Sbjct: 86 GVIVNNASNRKKEEVQEQEVEVSRAQGALI----RVFEALNVRF---------------- 125
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
G + V++R+++ HV ++GKGG+++E +R ET + I ++LP C
Sbjct: 126 -----GTSSTVSSRLLMEACHVVTVIGKGGELMEMIRKETGCNVEIC--QYNLPSCADPD 178
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR 301
+ +V++ G++ VK + ISSRL+ Q + G H+ + VP R
Sbjct: 179 DVMVKIEGNVFAVKKVLVSISSRLQACQSIFKKKMVGNPHNMQ-----TNVVPR-EALYR 232
Query: 302 RPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGR 361
++ S S + P S + + P DS + +V ++LC +++GR
Sbjct: 233 ASNVFQGDISVSRLKHRELDPLESLH--RNLSQPRKDSED--NKQQVVLKILCSKERIGR 288
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRI 421
VIG + LQ+E G + + DE + TI++ E P+ + P+Q AL+ + +++
Sbjct: 289 VIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSKM 348
Query: 422 VD------LGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPA 474
+ L + + IT RL+V S++I CL G +G + S +++ TGA I +L+ E+ P
Sbjct: 349 YENTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPK 408
Query: 475 CVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQ 513
CVS +++VQI G ++A+ +VT+ LR L FQ
Sbjct: 409 CVSENNQIVQISGAFPNVKEAINQVTSMLREDLINQSFQ 447
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ILC + G VIG + I+ ++ TGA+I + +E + I T DP
Sbjct: 275 VVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTI--TASEDPNA 332
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ SP+Q AL L+ ++ E+ G + + R+VV
Sbjct: 333 KN---SPSQRALVLVFSKMYENTTAKVLDS------------------GLTSSITARLVV 371
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+ CL+G+ G I ++ T I +L + + P+CVS + +IVQ+ G NVK A+
Sbjct: 372 RSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQN-PKCVSENNQIVQISGAFPNVKEAI 430
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFF-----PDDDY 292
++S LRE F H P +F P+D +
Sbjct: 431 NQVTSMLREDLINQ--SFQMGSHFPVNYFNPCIRPEDSF 467
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 40/254 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
++FR+L + +VG VIG+ ++ L+ + V S ++ITI ++ G +
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 408 ------------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEI 443
AQ AL+ + +++ + +++RLL+ + +
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRV-FEALNVRFGTSSTVSSRLLMEACHV 142
Query: 444 GCLEGRDGSLSEM-RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
+ G+ G L EM R+ TG N++I + +P+C D +V+I G + A + LV +++R
Sbjct: 143 VTVIGKGGELMEMIRKETGCNVEI-CQYNLPSCADPDDVMVKIEGNVFAVKKVLVSISSR 201
Query: 503 LRSYLYRDFFQKETPPSSTGPTGSALVVEA---ASPI---DITPAREVQTVTDPPAATHQ 556
L++ + F+K+ + + + EA AS + DI+ +R DP + H+
Sbjct: 202 LQA--CQSIFKKKMVGNPHNMQTNVVPREALYRASNVFQGDISVSRLKHRELDPLESLHR 259
Query: 557 SVQIPATSQPSKEA 570
++ SQP K++
Sbjct: 260 NL-----SQPRKDS 268
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 33/450 (7%)
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRL--HSPDRFFPDDDYVPHMNNT 299
+ V + G+ +VK A+ +SS + + ++ + P P + VP+ +
Sbjct: 4 DNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSE--VPYYPHG 61
Query: 300 ARRPSMDGAR--------FSGSNYRS-NNYGPRPSGYSIEAGAAPM-SDSVQPFYGEDLV 349
PS D G+N + Y + + + + A P+ S V E+L+
Sbjct: 62 GLYPSSDPIIPPRAVPQIMGGTNIQDVQGYADIGNTWPLYSSALPVVSGGVDASQSEELI 121
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
RMLCP +K+GRVIG ++ ++ G ++V D DE +I I++ E P D
Sbjct: 122 IRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKSM 181
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILS 468
A EA+L IQ +I D + D ++ +LLVPS IGC+ G+ GS ++E+R+ T A+I+I S
Sbjct: 182 AVEAVLLIQGKISD---EDDTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRI-S 237
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSAL 528
+ + P C DELV++ G I RDAL+++ RLR + R+ P G
Sbjct: 238 KGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRERDTGHNP-----TIGGES 292
Query: 529 VVEAASPIDITPAR-EVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNES--ER 585
+ + + P V +V P ++ S + + ES
Sbjct: 293 LYSGGAAYSLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGYGSLSQMWESGYGS 352
Query: 586 REDVPT-VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQP 644
PT + +P P STL++++P AV K++ K + ++SGA++ + + +
Sbjct: 353 ISSYPTKLYGSLPPP----STLDILIPANAVGKVLGKGGANIANIRKISGATIEISDARA 408
Query: 645 EGTQKIIQISGTPEQVERAQSVLQGFILST 674
G +I ISGTPE+ A++++Q FI++T
Sbjct: 409 RG-DRIALISGTPEEKRAAENLIQAFIMAT 437
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC K G VIG+ GS IKS+RQ +G I V + +E +I I+ T M
Sbjct: 123 RMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKSM- 181
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A EA+ LI +I + D V+ +++V
Sbjct: 182 ----AVEAVLLIQGKISDEDD---------------------------TEVSIQLLVPSK 210
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GC++GK G II ++R T+ IRI D P+C +++E+V+V G I+ V++A+ I
Sbjct: 211 VIGCIIGKSGSIINEIRKRTRADIRISKGDK--PKCADVNDELVEVGGAIDCVRDALIQI 268
Query: 262 SSRLRESQHRDRSHFH 277
RLR+ R+R H
Sbjct: 269 ILRLRDDVLRERDTGH 284
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
+ R++CP +G VIG+ I+ ++ + G +KV D+ +I IS++E DD
Sbjct: 13 EFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDS 72
Query: 407 LFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGAN 463
P EA + +Q R D I+ TTRLLVPSS IGCL G+ G++ +EMRR T AN
Sbjct: 73 FSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKAN 132
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
I+IL +E++P S DE+VQI G++ A+DALV+V TRL++ L+
Sbjct: 133 IRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLF 177
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 124/274 (45%), Gaps = 51/274 (18%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S P+D M + R++C GGVIGK G+II IRQ +GA I V ++ +I
Sbjct: 3 SAPRDEGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIA 62
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGVGGGG 184
IS D SFSP EA + R +E D G +
Sbjct: 63 ISTKEFFDD-----SFSPTIEAAVRLQPRCSDKVERDSGIVSF----------------- 100
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
TR++V +GCL+GKGG II +MR TK IRILP++ LP+ S +E+
Sbjct: 101 --------TTRLLVPSSRIGCLIGKGGTIITEMRRLTKANIRILPKED-LPKIASEDDEM 151
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
VQ+ GD++ K+A+ + +RL+ + G F P Y+P S
Sbjct: 152 VQISGDLDVAKDALVQVLTRLKANLFDKERAVPG-------FLPVMPYLPA--------S 196
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSD 338
+DG+ G NY S + G+S +G +SD
Sbjct: 197 VDGS--DGLNYDSRDGKRHGRGHSYSSGYGGLSD 228
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 2/170 (1%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
+R+LCP ++G VIG+ +++ +++ G +KV V G E++I++SS + P EL
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDEPGAELCR 92
Query: 410 AQEALLHIQTRIVDL-GADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQIL 467
AQEAL +Q+R+ + A +D R+LV +++GC+ G+ G +S++RR TGANI++
Sbjct: 93 AQEALFAVQSRLSEADAAQEDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRVS 152
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
+ ++PAC D LV + GE QA DAL +++ LR++ R Q P
Sbjct: 153 DKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQARAP 202
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 149/647 (23%), Positives = 283/647 (43%), Gaps = 100/647 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+LC + G VIGK GS+I+ +R TGA I V + G ER+I +S + E
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDEPGAE--- 89
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
AQEALF + R+ E+D +E+ RM+V +
Sbjct: 90 --LCRAQEALFAVQSRLSEADAA------QEDTC-----------------CVVRMLVEQ 124
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VGC+LGKGG++I +R T IR+ + LP C + +V V G+ V +A+
Sbjct: 125 AQVGCVLGKGGEVISDLRRRTGANIRVSDK-RDLPACAGSEDSLVAVKGEAQAVSDALRQ 183
Query: 261 ISSRLRESQHRD----RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG-AR-FSGSN 314
+S+ LR R R+ + + + H R P + AR N
Sbjct: 184 LSALLRTHSQRKPQQARAPMTFNITAVATAAVQPEQAQHRRQPMREPVLAPIARPHQCHN 243
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ + +P +++ +A + ++ R+L P +G VIG ++ ++
Sbjct: 244 CLPDAHAMQPRMTAVQEASAVV----------EVQLRLLVPATHIGCVIGRRGEMIRTIR 293
Query: 375 NEIGVDLKVADPVDGSD----------EQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
++ G +KV + G+ +++IT+++ E + P +EA+ + + L
Sbjct: 294 DDTGAHIKVHEGSQGARAFPPSEKKGVDRVITVAAAEAAGAAVSPTEEAVCLMA--LCLL 351
Query: 425 G-ADKDNIITTRLLVPSS-----------EIGCLEGRDGS-LSEMRRSTGANIQILSREE 471
G + + R+LVP+ ++G + G+ G+ ++++R+ +GA ++++ E
Sbjct: 352 GPSGLPPVPCIRILVPTPQGGTAEALSLLQVGGVLGKGGATITQVRKDSGAGVRLVPLEA 411
Query: 472 -----VPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYR-----------DFFQ 513
+P V+ ++VQI G I A A+ V +LR++ R + +
Sbjct: 412 EDDRWLPRDVAAGQMHKVVQIEGPITATVKAVRAVCAQLRAWQARSQGAQPARELTEAYG 471
Query: 514 KETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPA--TSQPSKEAA 571
P P A++ P + P + + D A P +P +
Sbjct: 472 GAHAPQQFHPMHQAML-----PRETAPGLRGRGLPDLSRAEMGMYDSPLRHCERPVLQLR 526
Query: 572 GSVS-ETVKQNESERREDVPTVINRVPLPLVTR----STLEVVLPDYAVPKLITKSKTLL 626
+ + + + + +R P ++ +V +VT + E+ L V ++ K+ +
Sbjct: 527 HPLDLQVLSRGQMDRAMSQPLMMQQVTQQVVTAPDQTQSCELRLVGVQVGCVLGKAGENI 586
Query: 627 TRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
T+ ++SGA V L + T++++++SGT EQV+ A +++Q F+L+
Sbjct: 587 TQIRKISGARVKLSDAPRGVTERLLRLSGTCEQVQAAVNLVQAFLLA 633
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 153/304 (50%), Gaps = 46/304 (15%)
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR-------------------LHSPDR 285
+ + G +++VK A+ +S L++ H DR+ G+ + P
Sbjct: 1 MMIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRE 60
Query: 286 FF---PDDDY--VP-------HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGA 333
F P + VP H+++ +R S S SN + +S+ A
Sbjct: 61 TFIGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGV------HSLSAEV 114
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
+S + +++ F+++C D++G VIG+ I+ LQ+E G + V V +++
Sbjct: 115 NRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDR 174
Query: 394 IITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--------DNIITTRLLVPSSEIGC 445
+ITI++ E P+ PAQ+A + + +R V+ G +K + +T +L+V S+++GC
Sbjct: 175 LITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGC 234
Query: 446 LEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
L G+ G + SEMR++TGA+I+I+ ++V C S D++VQI GE +DAL T RLR
Sbjct: 235 LLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLR 294
Query: 505 SYLY 508
L+
Sbjct: 295 DNLF 298
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T++I+C + + GGVIGK G+II++++ TGA ++V + E+R+I I T PE R
Sbjct: 130 TFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI--TASESPESR 187
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+SPAQ+A L+ R +E+ G E+ G+ G G+ V ++VVS
Sbjct: 188 ---YSPAQKATVLVFSRSVEA-------GIEK-------GIDSG--LNTGSSVTAQLVVS 228
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGCLLGKGG I+ +MR T IRI+ D + +C S ++++VQ+ G+ +NV++A+
Sbjct: 229 SNQVGCLLGKGGVIVSEMRKATGASIRIVGTDK-VSKCASDNDQVVQISGEFSNVQDALY 287
Query: 260 IISSRLRE 267
+ RLR+
Sbjct: 288 NATGRLRD 295
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+VT +T+E+V+P+ + + ++ + L R ++SGA V + E +P + + I +SG+P++
Sbjct: 488 IVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDE 547
Query: 660 VERAQSVLQGFIL 672
+ AQS+LQ FIL
Sbjct: 548 TQAAQSLLQAFIL 560
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 167/336 (49%), Gaps = 30/336 (8%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE----GPDDE 406
R+L P + +IG++ ++ L+++ +KV P D SD + PDD
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKVT-PKDASDPTHSCAMDFDNFIMSPDDL 203
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQ 465
A EA+L +Q +I D + D+ ++ RLLVP IGC+ G+ GS+ +E+RR T A+I+
Sbjct: 204 KSMAVEAILLLQGKIND---EDDDTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIR 260
Query: 466 ILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTG 525
I S+ + P C +DELV+++GE+ + RDALV++ RLR D KE S G
Sbjct: 261 I-SKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLR-----DDALKEKDGSHNPSVG 314
Query: 526 SALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAA-------GSVSETV 578
+ + S I + + +V PP Q P T + GS++
Sbjct: 315 ADPLYSGGSGISVPSL--LSSV--PPVTPLAYDQRPETGSGLGLLSSSNLYGYGSLTMGD 370
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
+S + +P P STLE+++P AV K++ K + ++SGA +
Sbjct: 371 NGYDSMSSYSSSKLYGGLPPP----STLEMLVPANAVGKVLGKGGANIANIRKISGAMIE 426
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
+ + + +I ISGTPEQ A++++Q FI++T
Sbjct: 427 ISDAKSARGDRIAHISGTPEQKRAAENLIQAFIMAT 462
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 45/210 (21%)
Query: 40 RHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGS 99
R+R +++ + N +N+ + R N++ YRILC D G VIGK+G
Sbjct: 7 RNRLQRDHHDGDNKNQKRRVNDKDERGNNDE-------LVAYRILCPDEVIGSVIGKNGK 59
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEI-------SDTRRRDPEGRMPSFSPAQEALFL 152
+I SIRQ T A + V + PG +R+I I D D F AQ+AL
Sbjct: 60 VINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLR 119
Query: 153 IHDRI-------LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
+H I L+SD R ++ R++V
Sbjct: 120 VHSAISNAVSSVLDSD------------------------RKMKDKEECRILVPSSQSAN 155
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLP 235
++GK G I+++R +T+ I++ P+D S P
Sbjct: 156 IIGKAGTTIKKLRSKTRATIKVTPKDASDP 185
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS-DTRRRDPEGRM 140
RIL ++ +IGK+G+ IK +R T A I V D + D P+
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDLK 204
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A EA+ L+ +I + D + V+ R++V
Sbjct: 205 ---SMAVEAILLLQGKINDEDD---------------------------DTVSIRLLVPC 234
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+GC++GK G II ++R TK IRI P+C S+E+V+V+G++ +V++A+
Sbjct: 235 KVIGCIIGKSGSIINEIRRRTKADIRI--SKGQKPKCADSSDELVEVLGEVGSVRDALVQ 292
Query: 261 ISSRLRESQHRDRSHFH 277
I RLR+ +++ H
Sbjct: 293 IVLRLRDDALKEKDGSH 309
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 20/145 (13%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI------SS 399
E + +R+LCP + +G VIG++ ++ ++ E +KV DP G ++++ITI
Sbjct: 37 ELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKE 96
Query: 400 EEGPDDE------LFPAQEALLHIQTRI---VDLGADKDNIIT----TRLLVPSSEIGCL 446
+ DDE AQ+ALL + + I V D D + R+LVPSS+ +
Sbjct: 97 DVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANI 156
Query: 447 EGRDG-SLSEMRRSTGANIQILSRE 470
G+ G ++ ++R T A I++ ++
Sbjct: 157 IGKAGTTIKKLRSKTRATIKVTPKD 181
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 5/170 (2%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
+LV R+LCP K+G VIG+ ++ ++ E G + V D + +E IITI+S E DD
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQ 465
A EA+L +Q++I D D + + RLLVP IGCL G+ GS+ ++MR T A I
Sbjct: 181 KSAAVEAVLLLQSKIND---DNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIY 237
Query: 466 ILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
I S+ E P S +DELV++ GE++ RDALV++ RLR + RD ++
Sbjct: 238 I-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQ 286
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 34/191 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC K G VIGK G IKSIR+ +GA I+V + EE II I+ D
Sbjct: 125 RVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATD-----D 179
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ S A EA+ L+ +I + + G ++ R++V
Sbjct: 180 AKSAAVEAVLLLQSKINDDNEG---------------------------KMNLRLLVPGK 212
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GCL+GKGG I+ MR +TK I I + PR S S+E+V+V G++ N+++A+ I
Sbjct: 213 VIGCLIGKGGSIVNDMRSKTKAAIYISKGEK--PRKASSSDELVEVFGEVENLRDALVQI 270
Query: 262 SSRLRESQHRD 272
RLR+ RD
Sbjct: 271 VLRLRDDVLRD 281
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 606 LEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQS 665
+E+ +P + K++ K T L ++SGA + ++E + + +ISGT EQ + A++
Sbjct: 373 MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAEN 432
Query: 666 VLQGFILST 674
+++ FI+ST
Sbjct: 433 LIKAFIMST 441
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 176/345 (51%), Gaps = 46/345 (13%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G +++FR+LCP+ K G VIG + +++ +++E G +KV + ++ ++E+II +SS +
Sbjct: 340 GTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDGL 399
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGAN 463
+ AQ AL + IVD + D + RLLV +S+IGCL G+ GS + ++R TGA
Sbjct: 400 APMLAAQVALFRVYRCIVD-SSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGAT 458
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDAL--VEVTTRLRSYLYRDFFQKETPPSST 521
+++L + +PAC + DEL++I G+ A AL V+ RLR + ++ S+
Sbjct: 459 VRVLPSDALPACANADDELLEI-GQWPADACALGIRIVSGRLRGNMRHKAAERLNVESN- 516
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPAT----SQPSKEAAGSVSET 577
V +AS +TP VQ D P + + ++P A S+S +
Sbjct: 517 --------VYSAS---MTPTMAVQ---DTPTLQQSELMMYGMTAYETEPVDTALASLSLS 562
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
E +P V T +++ + + + ++ + ++ ++SGA +
Sbjct: 563 APPVE------IPGV--------TTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARI 608
Query: 638 SLVEG--------QPEGTQKIIQISGTPEQVERAQSVLQGFILST 674
L G + + ++++++ISGT EQV AQ++++ FI S+
Sbjct: 609 KLYPGASGRNGARRAQDSERLLEISGTSEQVSSAQTIIERFIASS 653
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS---DTRRRDPE 137
+R+LC + G VIGK G +IK++R TGA + V G +ER++ ++ + D +
Sbjct: 72 FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVASGEELMMDDGD 131
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEE---EEYGGG----GGVGGGGFRGGGN 190
G + A+ ALF I D + S+ GG G + E G G GG GG
Sbjct: 132 GSDVPVTTAERALFRIFDTV-ASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGGR 190
Query: 191 RV-ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
V R++V R VG L+GKGG +I +R + +R++P LP C S +E++Q+
Sbjct: 191 AVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATM-LPTCASRGDELLQITA 249
Query: 250 -----DINNVKNAVAIISSRLR 266
D N+V A+A + S LR
Sbjct: 250 PVRDTDGNDVDLALASVKSALR 271
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 32/187 (17%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R+LC K G VIG++G +I+ IR TGA + V E I EERII +S + +G
Sbjct: 345 FRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSS----NDDGLA 400
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
P + AQ ALF ++ I++S G + R++V
Sbjct: 401 PMLA-AQVALFRVYRCIVDSSGSD-------------------------VPLPFRLLVQT 434
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV-VGDINNVKNAVA 259
+GCL+GKGG II Q+R ET +R+LP D +LP C + +E++++ + +
Sbjct: 435 SQIGCLIGKGGSIIRQIRNETGATVRVLPSD-ALPACANADDELLEIGQWPADACALGIR 493
Query: 260 IISSRLR 266
I+S RLR
Sbjct: 494 IVSGRLR 500
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 62/234 (26%)
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
+G++ E G ++ SVQ FR+LCP+ ++GRVIG+ +++ L+ E G +KVA
Sbjct: 57 AGWATEGGR--VNASVQ--------FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVA 106
Query: 385 DPVDGSDEQIITISSEE--------GPDDELFPAQEALLHIQTRIVD-----LGADKDN- 430
G+DE+++ ++S E G D + A+ AL I + L +D
Sbjct: 107 PTTRGADERVVLVASGEELMMDDGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGT 166
Query: 431 -------------------------IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANI 464
+ RLLVP +++G L G+ G+ +S +R S+GA +
Sbjct: 167 SSESGSGVPESSSTGGERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATV 226
Query: 465 QILSREEVPACVSGTDELVQIVGEIQ------------AARDALVEVTTRLRSY 506
+++ +P C S DEL+QI ++ + + AL V LR Y
Sbjct: 227 RLMPATMLPTCASRGDELLQITAPVRDTDGNDVDLALASVKSALRMVAKNLREY 280
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 45/318 (14%)
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
LG+G +E + ET ++R+ V +E++++ GD ++ A+ +SS L+
Sbjct: 156 LGRG--TLEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSSYLQ 213
Query: 267 ESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSG 326
H + +P FP + S NYG SG
Sbjct: 214 GDLHA--CSLTTSVTTPSPMFP---------------------WKSSEVPEPNYGDLHSG 250
Query: 327 YSIEAGA--APMSDSVQPFYG-------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
S + P D Q G + + FR+LC ++ G +IG+ I++ + E
Sbjct: 251 VSTKCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETET 310
Query: 378 GVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII----- 432
G + V +P G E++ITIS+ E P Q A+L I R+ ++ + N++
Sbjct: 311 GASIDVGNPFSGCMERVITISALESPGKH-SKVQSAILCIFDRMEEV---ERNLMFGKPE 366
Query: 433 -TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ R+LVP S+ L G G++ EM +STGA I+IL +VPAC S + ++QI G +
Sbjct: 367 CSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLV 426
Query: 491 AARDALVEVTTRLRSYLY 508
RDAL V+ +LR++ +
Sbjct: 427 NVRDALFVVSEKLRNHAF 444
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 186/439 (42%), Gaps = 80/439 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
++R+LCH AGG+IGK G IIK TGA I+V G ER+I IS + G+
Sbjct: 282 SFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITIS---ALESPGK 338
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S Q A+ I DR+ E + F G + R++V
Sbjct: 339 ---HSKVQSAILCIFDRMEEVERNLMF---------------------GKPECSARVLVP 374
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ L+G GG II++M T +I IL + +P C S E ++Q+ G++ NV++A+
Sbjct: 375 KSQFSSLVGLGGAIIKEMVKSTGARIEIL-DEMDVPACASNCERVLQITGNLVNVRDALF 433
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
++S +LR + H DD + SM S NY ++N
Sbjct: 434 VVSEKLRNHAFSSKCTKH-----------DDGNATASDIIESTASMTVNISSTDNYSTDN 482
Query: 320 YGPR----PSGYSIEAGAAPMSDSVQPFY---GEDLVFRMLCPIDKVGRVIGESEGIVEL 372
+ PR PS +E+ + +S F+ L L + G + ++EG +
Sbjct: 483 F-PRTDHEPSVIQMES----LENSFSAFHLGSPGSLELESLANAEDTGIINLKNEG-QKP 536
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII 432
V V P DG D++I S G P + L+ + KD ++
Sbjct: 537 PNRSCAVITGVQKPADGDDDRI--SKSNHGITS---PDENQLMRVM---------KDPVV 582
Query: 433 T--TRLLVPSSEIGCLEGRD--GSLSEMRRSTGANIQIL----SREEVPACVSGTDELVQ 484
T T + I CL RD +L+++R+ TGA+I + + +SGT + Q
Sbjct: 583 TRMTYEIAACGGIFCLLYRDKGNNLAQLRQITGADISVYDPPPETSDCSIVISGTPDQAQ 642
Query: 485 IVGEIQAARDALVEVTTRL 503
+ A AL+++T ++
Sbjct: 643 L------ALAALIDLTRQM 655
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 43/379 (11%)
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ SPAQEAL + D G E+E G G + ++V
Sbjct: 102 ALSPAQEALVAVIDT------EGALCCAVEKEARGKARPGC---------ITCLLLVDAD 146
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL--PRCVSMSEEIVQVVGDINNVKNAVA 259
+ G+G ++E++ +E +R+ + PR + EE+V++ GD V+ A+
Sbjct: 147 RLEASTGRG--VMERIALEAGADVRVAMWEEGAQPPRGQPL-EEVVEITGDRTAVRKALV 203
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV-PHMNNTARRPSMDGARFSGSNYRSN 318
+SS L+ S + + + + P+M + S + A+ GS +++
Sbjct: 204 ALSSFLQGDLPIGNSTTYVKKEGSILPWASSEVPGPNMGASCSEASTEFAQ--GSVAKTH 261
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
P G + +A + + + + FR+L P G +IG+ I++ ++ E G
Sbjct: 262 C----PEGNTGDAQSKTL---------QQVSFRLLLPTYLAGGLIGKKGLIIKGIEVETG 308
Query: 379 VDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA------DKDNII 432
+ V PV G E++ITI + E PD E Q ALL I R++++ +K +
Sbjct: 309 ACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRMMEMETNTHSTFEKASQF 368
Query: 433 TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQA 491
R+LV ++ GCL G GS + EM +TGA IQIL E+PAC S + +VQI GE+
Sbjct: 369 LVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACASTFELVVQITGELMN 428
Query: 492 ARDALVEVTTRLRSYLYRD 510
R+AL V +LR++++ +
Sbjct: 429 IRNALSLVFWKLRNHIFSN 447
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 24/198 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
++R+L AGG+IGK G IIK I TGA I+V + G +ER+I I D E
Sbjct: 279 SFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSE-- 336
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ Q AL LI DR++E + E+ ++ R++V
Sbjct: 337 ---YHIVQSALLLIFDRMMEMETNTHSTFEKASQF------------------LVRVLVL 375
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ GCL+G GG II++M T +I+IL D +P C S E +VQ+ G++ N++NA++
Sbjct: 376 KNQFGCLVGLGGSIIKEMVNTTGARIQIL-DDTEIPACASTFELVVQITGELMNIRNALS 434
Query: 260 IISSRLRESQHRDRSHFH 277
++ +LR + + ++
Sbjct: 435 LVFWKLRNHIFSNETDYN 452
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPD 404
E+ R+LC + +G VIG+S V ++ + G +KV + D S E++I ISS E P
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 90
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGAN 463
+ + PA EAL+ + ++ + + +TRL+VPSS++GC+ G G +++MRR TGA
Sbjct: 91 EPISPAIEALILLHDKVS--APSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGAE 148
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
I++ S+ + P +S DELVQ+ G AR AL E+ +RLR+ RD
Sbjct: 149 IRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRD 195
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 94/194 (48%), Gaps = 33/194 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEISDTRRRDPEGRM 140
RILC G VIGKSG+ ++ + Q TGA I V E+ ER+I IS E
Sbjct: 36 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSN-----EIPA 90
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
SPA EAL L+HD++ E+ + +TR+VV
Sbjct: 91 EPISPAIEALILLHDKVS---------APSEKHHS-----------------STRLVVPS 124
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VGC++G+GGK+I MR T +IR+ + P+ +S +E+VQV G + A+
Sbjct: 125 SKVGCIIGEGGKVITDMRRRTGAEIRVYSKADK-PKYLSFDDELVQVAGPPTIARGALTE 183
Query: 261 ISSRLRESQHRDRS 274
I+SRLR RD S
Sbjct: 184 IASRLRTRTLRDTS 197
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
ST+E+ +P+ ++ ++ L ++SGA + L E ++ +++I GT +Q + A
Sbjct: 421 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAA 480
Query: 664 QSVLQGFI 671
QS+LQGFI
Sbjct: 481 QSLLQGFI 488
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 9/191 (4%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
++ RM+CP +G VIG+ I+ ++ E G +KV D+ +ITIS++E DD
Sbjct: 29 KEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICDD 88
Query: 406 ELFPAQEALLHIQTRIVDLGADKDNII---TTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+ P EA L +Q R + ++D+ + TTRLLVPSS IGCL G+ G + EMR+ T
Sbjct: 89 QYSPTIEAALRLQPRCSE-KMERDSGLFSFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTK 147
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A I+I ++++P DE+VQI G++ A+DAL++++ RLR+ + F +E S+
Sbjct: 148 AIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRA----NAFDREGLMSAI 203
Query: 522 GPTGSALVVEA 532
P L V A
Sbjct: 204 LPVFPYLPVSA 214
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S P+D + R++C G VIGK G+II IRQ +GA I V ++ +I
Sbjct: 20 SAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLIT 79
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
IS D + +SP EA + R E + E +
Sbjct: 80 ISAKEICDDQ-----YSPTIEAALRLQPRCSE---------KMERD-------------S 112
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G TR++V H+GCLLGKGG II++MR TK IRI PR LP+ +E+VQ+
Sbjct: 113 GLFSFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRI-PRKDKLPKTALDDDEMVQI 171
Query: 248 VGDINNVKNAVAIISSRLR 266
GD++ K+A+ IS RLR
Sbjct: 172 SGDLDIAKDALIQISRRLR 190
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 108/190 (56%), Gaps = 8/190 (4%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
++ R++CP +G VIG+ I+ ++ E G +KV V D+ +ITIS++E D
Sbjct: 29 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKE-IYD 87
Query: 406 ELFPAQEALLHIQTRIVDLGADKDNII--TTRLLVPSSEIGCLEGRDGSL-SEMRRSTGA 462
P EA + +Q R + +I TTRLLVPSS IGCL G+ G++ EMR+ T A
Sbjct: 88 HYSPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKA 147
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
I+I +E +P S DE+VQI G++ A+DAL++++ RLR+ + F +E S+
Sbjct: 148 IIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRA----NVFDREGAMSAIL 203
Query: 523 PTGSALVVEA 532
P L V A
Sbjct: 204 PVLPYLPVSA 213
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 97/199 (48%), Gaps = 29/199 (14%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S P+D + R++C G VIGK G+II IRQ +GA I V + ++ +I
Sbjct: 20 SAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLIT 79
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
IS D +SP EA + R E + E +
Sbjct: 80 ISAKEIYD------HYSPTIEAAVRLQPRCSE---------KMERD-------------S 111
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G TR++V +GCLLGKGG II++MR TK IRI PR +LP+ S +E+VQ+
Sbjct: 112 GLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRI-PRKENLPKVASDDDEMVQI 170
Query: 248 VGDINNVKNAVAIISSRLR 266
GD++ K+A+ IS RLR
Sbjct: 171 AGDLDVAKDALIQISRRLR 189
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 48/363 (13%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG ++ + E +K+ D G+ E+ + +S++E
Sbjct: 146 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKE 205
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNI---------ITTRLLVPSSEIGCLEGRD-G 451
PD L PA + LL + RIVD G D D+ ++TRLLVP+S+ G L G+ G
Sbjct: 206 EPDSALPPAMDGLLRVHKRIVD-GLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGG 264
Query: 452 SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY----- 506
++ ++ ++ +++L E++P D +V+++G+ A+ + + LR +
Sbjct: 265 TVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRS 324
Query: 507 ---LYRDFFQKETPP--------SSTGPTGSALVVEA------ASPIDITPAREVQTVTD 549
L+ Q + PP S GP + A +P + P R+++
Sbjct: 325 IIPLFEMHMQMQNPPHMEHMPPHQSWGPP-QGIPPNAGGGPGYGNPQYMPPPRQIENYY- 382
Query: 550 PPAATHQSVQIPATSQPSKEAAGSVSET-VKQNESERREDVPTVINRVPLPLVTRSTLEV 608
PPA + P QP + + E + + S + P++I ++ T ++
Sbjct: 383 PPA----DLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQI--------TQQM 430
Query: 609 VLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQ 668
+P +I + T ++ SGA+V++ E + + ++ISGT QV+ AQ ++Q
Sbjct: 431 QIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQ 490
Query: 669 GFI 671
F+
Sbjct: 491 NFM 493
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +R+L K G +IG+ G IK I + T A I + + PG ER + +S
Sbjct: 144 KWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVS- 202
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H RI++ G G+ G G
Sbjct: 203 -AKEEPDSALP---PAMDGLLRVHKRIVD-----GLDGDSSH-----------ASSGTGT 242
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+V+TR++V G L+GK G ++ ++ + +R+L + LP + +V+V+GD
Sbjct: 243 KVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAE-DLPVFALQDDRVVEVLGD 301
Query: 251 INNVKNAVAIISSRLRE 267
V AV +I+S LR+
Sbjct: 302 AAGVHKAVELIASHLRK 318
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 166/372 (44%), Gaps = 48/372 (12%)
Query: 333 AAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
A ++D P + D VFR+L P VG +IG V+ + E +K+ + + G+ E
Sbjct: 70 GAGLTDKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPE 129
Query: 393 QIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD-----------KDNIITTRLLVPSS 441
+ + +S++E P+ + PA + +L + RI++ G D I+TRLLV +
Sbjct: 130 RTVMVSAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGT 189
Query: 442 EIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVT 500
+ G L GR G+ + ++ +GA +++L+ E++P C D LV++ GE + A+ +
Sbjct: 190 QAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIV 249
Query: 501 TRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQI 560
+ LR +L + P + EA I P E + + +QS +
Sbjct: 250 SHLRKFL----VDRSVLP----------LFEADRTIGNQPQIE-ENLPHQSWGHNQSSSV 294
Query: 561 PATSQPSKEAAGSVSETVKQNESERREDVP---------------------TVINRVPLP 599
P++ +S + + D+P +V N P P
Sbjct: 295 PSSGGAGLGNTQYMSSAFQHDNYYPPSDLPLESQGHHGLSVYGRDPSLAGHSVANPPPAP 354
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
++T+ T + +P +I + ++ SGA++++ E + + ++I GT Q
Sbjct: 355 VITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEIRGTATQ 414
Query: 660 VERAQSVLQGFI 671
V+ AQ ++Q F+
Sbjct: 415 VQTAQQLIQNFM 426
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 44/333 (13%)
Query: 20 DTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRAN--------SNPK 71
D+ G +P Y QP N ++++ S N S R ++ K
Sbjct: 18 DSAGIYRPPYTGRGQPGNMATASVETMQEQSDMIGMARSTNLSQKRGRDDEIGAGLTDKK 77
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
P +R+L GG+IG+ G +K + + T + I + E + G ER + +S
Sbjct: 78 WPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVS-- 135
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+ +PE SPA + + +H RI+E GG G E G +GG
Sbjct: 136 AKEEPEA---PVSPAMDGILRVHKRIIE----GGPDGRGEL---------GRAQQGGSGT 179
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
++TR++V+ G L+G+ G I+ ++ + +R+L + LP C + +V+V G+
Sbjct: 180 ISTRLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAE-DLPFCALADDRLVEVQGEA 238
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD----DDYVPHM----NNTARRP 303
+V AV +I S LR+ DRS L DR + ++ +PH N ++ P
Sbjct: 239 GSVHKAVELIVSHLRKFL-VDRSVL--PLFEADRTIGNQPQIEENLPHQSWGHNQSSSVP 295
Query: 304 SMDGARFSGSNYRS-----NNYGPRPSGYSIEA 331
S GA + Y S +NY P PS +E+
Sbjct: 296 SSGGAGLGNTQYMSSAFQHDNYYP-PSDLPLES 327
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPD 404
E+ R+LC + +G VIG S V ++ + G + V + D S E++I ISS+E P
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPA 124
Query: 405 DELFPAQEALLHIQTRIVDLGADK--------DNIITTRLLVPSSEIGCLEGRDGS-LSE 455
D + P EAL+ + +++ + ++ + TRL+VPS ++GC+ G G ++E
Sbjct: 125 DPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITE 184
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
MRR GA I++ S+ + P +S +ELVQ+ G AR+AL E+ +RLR + RD
Sbjct: 185 MRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRILRDGIS-- 242
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDP 550
S GP P DI P+RE P
Sbjct: 243 ---SFDGP-----------PADIFPSREFTQYGRP 263
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEISDTR-RRDPEGR 139
RILC G VIG+SG+ ++ + Q TGA I V EL ER+I IS DP
Sbjct: 70 RILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPADP--- 126
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SP EAL L+H ++ S E E+ ++ TR+VV
Sbjct: 127 ---VSPTIEALILLHSKVSASKVSEPSESEPSGEH----------------KLVTRLVVP 167
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VGC+LG+GGK+I +MR +IR+ + P+ +S +EE+VQV G + + A+
Sbjct: 168 SKKVGCILGEGGKVITEMRRRIGAEIRVYSKADK-PKYLSFNEELVQVSGSPDIAREALT 226
Query: 260 IISSRLRESQHRDR-SHFHGRLHSPDRFFPDDDYV 293
I+SRLR+ RD S F G P FP ++
Sbjct: 227 EIASRLRDRILRDGISSFDG---PPADIFPSREFT 258
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 602 TRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVE 661
+ S++E+ +P+ ++ ++ L ++SGA + L+E +P ++ I++I G QV
Sbjct: 490 SSSSVELRIPNSSLESVVGAGGVNLAEIRQISGARMKLLEARPGSSESIMEIQGMAHQVR 549
Query: 662 RAQSVLQGFI 671
AQS+LQGFI
Sbjct: 550 VAQSLLQGFI 559
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 210/474 (44%), Gaps = 66/474 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE--RIIEISDTRRRDPE 137
T+RILC+ +AG VIGK G ++K + + T + I V E P D+ RII+I
Sbjct: 31 TFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWV-EKTPLDDSPYRIIKIF-------- 81
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF-RGGGNRVATRM 196
G + S S + + + + E +Y F + V+ +
Sbjct: 82 GHVGSVSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNFGDCTSSTVSCNL 141
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD-INNVK 255
++ HV ++GK G++++++ ET +++ R H L C + + ++++ G+ ++ V
Sbjct: 142 LMEGSHVVTVIGKNGELMQRILEETGCNVQL--RSHDLSICTNPGDVVLKIEGNRLSAVM 199
Query: 256 NAVAIISSRL--------------------------RESQHRDRSHFHGRLHSPDRFFPD 289
A+ ISSRL R Q+R+ HG LH +
Sbjct: 200 KALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDP-HGSLHRHVEISQE 258
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLV 349
D V T +P +D ++R + +I+ P+ S DL
Sbjct: 259 DALVRPFFRTITQPRIDYLPHPSYDHRLITSASKNPPVTIKQ---PLQASKDDIRQVDL- 314
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
++LC ES +V ++ + V D DE+++TI++ E D
Sbjct: 315 -KILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDITSE 365
Query: 410 AQEALLHI--------QTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRST 460
+Q AL+ + +++D G IT RL+V S++I CL G +G + + +++ T
Sbjct: 366 SQRALVLVFSNMYENATAKVLDSGLTSS--ITARLVVRSNQINCLLGEEGRIKTTIQQRT 423
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQK 514
GA I +L+ E+ P CVS +++VQI GE R+A+ +VT+ LR L FQ+
Sbjct: 424 GAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQR 477
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 45/244 (18%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-ADPVDGSDEQIITISSEEGPD 404
E + FR+LC + + G VIG+ G+V+ L + V P+D S +II I G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 405 DEL-----------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSS 441
+ AQ AL+ + ++ G + ++ LL+ S
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRV-FEALNFGDCTSSTVSCNLLMEGS 146
Query: 442 EIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVG-EIQAARDALVEV 499
+ + G++G L + + TG N+Q+ S ++ C + D +++I G + A ALV +
Sbjct: 147 HVVTVIGKNGELMQRILEETGCNVQLRS-HDLSICTNPGDVVLKIEGNRLSAVMKALVSI 205
Query: 500 TTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAA-SPIDITPA--REVQTVTDPPAATHQ 556
++RL++ PP ST + V +A P++ REV DP + H+
Sbjct: 206 SSRLQA----------CPPISTASLHAEAVPDALRRPMEYRSQQYREV----DPHGSLHR 251
Query: 557 SVQI 560
V+I
Sbjct: 252 HVEI 255
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 150/327 (45%), Gaps = 63/327 (19%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEI--SDTRRRDPE 137
+R+LC + G +IGK GS+I+ ++ TG+ I V + IP EER++ I +++D
Sbjct: 244 FRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDDS 303
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE----------------YG-GGGGV 180
S +P+ E ++ E G G G++EE +G V
Sbjct: 304 NVFDSENPSSEE--PKQEKGSECAGTSG--GDDEEAPSSAQMALLRVLERIVFGDDAASV 359
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
G G G + RM+V V L+ KGGK+I+++R ++ +RI D +P C
Sbjct: 360 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQ-IPPCAFP 418
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRF-FPDDDYVPHMNNT 299
+ ++Q+ G ++VK A+ +I++ L+ES G + D FP Y P
Sbjct: 419 GDVVIQITGKFSSVKKALLLITNCLQES---------GAPPTWDECPFPQPGYPP----- 464
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPF----YGEDLVFRMLCP 355
+Y S Y P+ + PM + V PF E++ FR+LCP
Sbjct: 465 --------------DYHSMEYHPQ-----WDHPPNPMPEDVVPFNRPVVEEEVSFRLLCP 505
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLK 382
DKVG +IG+ +V LQNE G +K
Sbjct: 506 ADKVGSLIGKGGAVVRALQNESGASIK 532
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 50/208 (24%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD--PVDGSDEQIITI----- 397
E + FR+LCP + G +IG+ ++ LQ+ G ++V D PV S+E+++ I
Sbjct: 239 AESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVP-SEERVVLIIAPSG 297
Query: 398 --------------SSEE-------------GPDDELFP--AQEALLHIQTRIVDLGADK 428
SSEE G DDE P AQ ALL + RIV G D
Sbjct: 298 KKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIV-FGDDA 356
Query: 429 DNI-----------ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACV 476
++ R++V +++ L + G + + +R +GA ++I S +++P C
Sbjct: 357 ASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCA 416
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLR 504
D ++QI G+ + + AL+ +T L+
Sbjct: 417 FPGDVVIQITGKFSSVKKALLLITNCLQ 444
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 15/170 (8%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
+LV R+LCP K+G VIG+ ++ ++ E G + V D + +E IITI+S E DD
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQ 465
A EA+L +Q++I D DN IGCL G+ GS+ ++MR T A I
Sbjct: 181 KSAAVEAVLLLQSKIND-----DN--------EGKVIGCLIGKGGSIVNDMRSKTKAAIY 227
Query: 466 ILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
I S+ E P S +DELV++ GE++ RDALV++ RLR + RD ++
Sbjct: 228 I-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQ 276
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 44/191 (23%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+LC K G VIGK G IKSIR+ +GA I+V + EE II I+ D
Sbjct: 125 RVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDD----- 179
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ S A EA+ L+ +I + + G
Sbjct: 180 AKSAAVEAVLLLQSKINDDNEG-------------------------------------K 202
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+GCL+GKGG I+ MR +TK I I + PR S S+E+V+V G++ N+++A+ I
Sbjct: 203 VIGCLIGKGGSIVNDMRSKTKAAIYISKGEK--PRKASSSDELVEVFGEVENLRDALVQI 260
Query: 262 SSRLRESQHRD 272
RLR+ RD
Sbjct: 261 VLRLRDDVLRD 271
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 606 LEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQS 665
+E+ +P + K++ K T L ++SGA + ++E + + +ISGT EQ + A++
Sbjct: 363 MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAEN 422
Query: 666 VLQGFILST 674
+++ FI+ST
Sbjct: 423 LIKAFIMST 431
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 168/426 (39%), Gaps = 114/426 (26%)
Query: 14 HQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDP 73
+DYDGDT NN RH+ + N + ++
Sbjct: 11 QRDYDGDT--------------NNQKRHKDDKGTNNDGLI-------------------- 36
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----- 128
YRILC D G VIGKSG +I SIR + A + V + PG ++RII I
Sbjct: 37 ------VYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIK 90
Query: 129 --SDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGVGGG 183
D D AQ+AL +H I + S G ++EE
Sbjct: 91 EKEDVDVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEE---------- 140
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP--RCVSMS 241
+++V ++GK G I+++R +T+T I+I+ +D + P C
Sbjct: 141 ----------CQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDF 190
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR---------------LHSPDRF 286
+ + + G+ VK A+ +S+ + + ++ ++ P F
Sbjct: 191 DNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSIIIPSDVPIYQPGGF 250
Query: 287 FPDDD------YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSV 340
+P+ + VP + P + G YG S + + P V
Sbjct: 251 YPNAEPIVSSRSVPPILGATHIPELQG------------YGDMGSSWPVYTSTLP----V 294
Query: 341 QPFYG-----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
P +G E+L+ R+LCP DK+GRVIG+ ++ ++ G ++V D DE II
Sbjct: 295 VPSFGNVSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECII 354
Query: 396 TISSEE 401
T+++ E
Sbjct: 355 TVTATE 360
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR 133
R+LC K G VIGK GS IKSIRQ +GA I V + +E II ++ T R
Sbjct: 310 RVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATER 361
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 43/196 (21%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI-SDTRRRDPEGR 139
+RILC K GGVIGK G+II+ R+ TGA I + + + G +ER+I I +D + E
Sbjct: 102 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 161
Query: 140 MPS---------------------------FSPAQEALFLIHDRILESDGGGGFYGEEEE 172
SPAQ+AL + +RIL+ D ++E+
Sbjct: 162 AICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 221
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
G V R++ VGC+LG+GGKI+E++R E+ QIR+LP+DH
Sbjct: 222 L--------------GNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDH 267
Query: 233 SLPRCVSMSEEIVQVV 248
+P C S +E++QVV
Sbjct: 268 -IPACASPGDELIQVV 282
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 44/186 (23%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
++FR+LCP K G VIG+ I+ + + G +++ D V G DE++I I
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 398 -------------------SSEEGP----DDELFPAQEALLHIQTRIVDL---------G 425
+S P DDE PAQ+AL+ + RI+ +
Sbjct: 160 ASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 219
Query: 426 ADKDNI-ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELV 483
D N+ + RLL PS+++GC+ GR G + E +R+ +GA I++L ++ +PAC S DEL+
Sbjct: 220 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 279
Query: 484 QIVGEI 489
Q+V ++
Sbjct: 280 QVVHKL 285
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Query: 431 IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
+ITT+LL+PS++ GCL G+ G++ SEMR+ T ANI+IL +E++P C +DE+VQIVG+I
Sbjct: 2 VITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDI 61
Query: 490 QAARDALVEVTTRLRSYLYRDF 511
+AAR ALV+VT+RLRS+++R+
Sbjct: 62 RAARAALVQVTSRLRSFIHREI 83
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ T++++ GCLLGKGG II +MR +T+ IRILP++ LP C S+E+VQ+VGDI
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKE-DLPPCALDSDEMVQIVGDI 61
Query: 252 NNVKNAVAIISSRLRESQHRD 272
+ A+ ++SRLR HR+
Sbjct: 62 RAARAALVQVTSRLRSFIHRE 82
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 102/172 (59%), Gaps = 12/172 (6%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D VFR++ P+ KVG +IG V+ + E +K+ + V G+ E+I+ +S+ E P+
Sbjct: 12 DNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAA 71
Query: 407 LFPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSE 455
+ PA E LL + R+++ GA+ +++ +++RLLV +++ G L GR G+ +
Sbjct: 72 ISPAMEGLLRVHRRVIE-GAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKS 130
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ ++GAN+++L EE+P C D +V++ G+ + + A+ V + LR +L
Sbjct: 131 IQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFL 182
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 21/187 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K GG+IG+ G +K + + T + I + E +PG ERI+ +S R DPE
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVS--AREDPEA-- 70
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA E L +H R++E G E E GG V++R++V+
Sbjct: 71 -AISPAMEGLLRVHRRVIE--------GAEPESV-------DAEIAPGGAPVSSRLLVAA 114
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
G L+G+ G I+ ++ + +R+LP + LP C + +V+V GD NV+ A+ +
Sbjct: 115 TQAGSLIGRQGATIKSIQDTSGANVRVLPAEE-LPLCALADDRVVEVQGDPRNVQRAMEL 173
Query: 261 ISSRLRE 267
+ S LR+
Sbjct: 174 VVSHLRK 180
>gi|125597123|gb|EAZ36903.1| hypothetical protein OsJ_21247 [Oryza sativa Japonica Group]
Length = 114
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 64/83 (77%)
Query: 594 NRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQI 653
R +PLVTRSTLEVV+P AV L ++ + L + SEMSGA+V+L + +P+ +K+++I
Sbjct: 27 KRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRI 86
Query: 654 SGTPEQVERAQSVLQGFILSTQD 676
SGTPEQ ++AQS+LQGFILS QD
Sbjct: 87 SGTPEQADKAQSLLQGFILSIQD 109
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D VFR++ P+ KVG +IG V+ + E +K+ + V G+ E+I+ +S+ E P+
Sbjct: 9 DNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAA 68
Query: 407 LFPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSE 455
+ PA E LL + R+++ GA+ ++ +++RLLV +++ G L GR G+ +
Sbjct: 69 ISPAMEGLLRVHRRVIE-GAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKS 127
Query: 456 MRRSTGANIQIL-SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY----RD 510
++ S+GA +++L + EE+P C D +V++ GE + + A V LR +L
Sbjct: 128 IQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLP 187
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEA 570
F+ ++ S + D ++ + + ++P SQP +++
Sbjct: 188 LFELNRAVANQSNQQSTASQWQQPSSTQQQQPPNYSSND--SSYYGAAELPHHSQPQQQS 245
Query: 571 AGSVSETVKQNESERREDVP-TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
+ + R + T++ P P++T+ T + +P +I + ++
Sbjct: 246 HDLANHHHGLSLYGRDPTLGGTIVPPTPAPVITQVTQHMQIPLSYADAIIGGAGANISYM 305
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQ 668
SGA++++ E + + ++I G+ QV+ AQ ++Q
Sbjct: 306 RRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ 344
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+R++ K GG+IG+ G +K + + T + I + E +PG ERI+ +S R DPE
Sbjct: 11 VFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSA--REDPEA- 67
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ SPA E L +H R++E G E E GG V++R++V+
Sbjct: 68 --AISPAMEGLLRVHRRVIE--------GAEPES-------ADAEIAPGGAPVSSRLLVA 110
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
G L+G+ G I+ ++ + +R+LP LP C + +V+V G+ NV+ A
Sbjct: 111 ATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATE 170
Query: 260 IISSRLRE 267
++ + LR+
Sbjct: 171 LVVAHLRK 178
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 24/350 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG ++ + E +K+ D G+ E+ + +S++E
Sbjct: 111 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKE 170
Query: 402 GPDDELFPAQEALLHIQTRIVD-LGADKDNI-----ITTRLLVPSSEIGCLEGRD-GSLS 454
PD L PA + LL + RIVD L D ++ ++TRLLV +S+ G L G+ G++
Sbjct: 171 EPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVK 230
Query: 455 EMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY-------- 506
++ ++ +++L E++P D +V++VGE A+ + + LR +
Sbjct: 231 SIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIP 290
Query: 507 LYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQP 566
L+ Q PP P P + P P + + P
Sbjct: 291 LFEMQMQMSNPPIEHMPPHQPW----GPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYP 346
Query: 567 SKEAAGSVSETVKQNESERREDVP----TVINRVPLP-LVTRSTLEVVLPDYAVPKLITK 621
E V + Q S +VP + P P ++T+ T ++ +P +I
Sbjct: 347 PPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGT 406
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ ++ SGA+V++ E + + ++I+GT QV+ AQ ++Q F+
Sbjct: 407 AGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 456
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+++++I R P + + +R+L K G +IG+ G IK I + T A I
Sbjct: 98 DDDSAIGGGEKRWPGWPGE------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 151
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + PG ER + +S + +P+ +P PA + L +H RI++ G G+
Sbjct: 152 ILDGPPGTAERAVMVS--AKEEPDSSLP---PAMDGLLKVHKRIVD-----GLEGDSSHM 201
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
GG +V+TR++V+ G L+GK G ++ ++ + +R+L +
Sbjct: 202 PPGG-------------KVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-D 247
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
LP + +V+VVG+ V AV +I+S LR+
Sbjct: 248 LPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK 281
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 156/344 (45%), Gaps = 55/344 (15%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G D+VFR++ +K+G+VIG+ + L+ + G +K+ADPV ++++I ISS+ +
Sbjct: 90 GRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEE 149
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITT----------RLLVPSSEIGCLEGRDG-SL 453
+E A++AL+ I T I++ + RLL+ S+ G L G G ++
Sbjct: 150 EETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTI 209
Query: 454 SEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
E+R +GA I+IL + P C S TD LVQI GE+ AL + LR + R+
Sbjct: 210 KEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREHPPREV 269
Query: 512 FQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAA 571
ST PT A ++PA + +P T P
Sbjct: 270 I-------STRPTYYA---------GLSPANGLMV-------------LPQTVLP----- 295
Query: 572 GSVSETVKQNES----ERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLT 627
G +T N S R T+ LP V T+E+ +P +I K ++
Sbjct: 296 GYNMQTGNSNYSYLGAAGRAAGGTISAAFALPKV---TVEMKIPSSVAGGVIGKRGDNIS 352
Query: 628 RFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ +SGA V ++ G+ +G + I GT QV AQ+++ I
Sbjct: 353 QIRSLSGAIVKVI-GEKDGATRTIFFEGTAHQVATAQNLVNNHI 395
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ K G VIGK GS I +R+ TGA I + + + E+R+I IS
Sbjct: 95 FRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIIS-----SKGEEE 149
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A++AL I IL EE G G R G + R++++
Sbjct: 150 EETSAAEQALIQIATVIL-------------EESGESSATAKVGTRHVGPNM-MRLLIAG 195
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE--EIVQVVGDINNVKNAV 258
G L+G GK I+++R ++ I+ILP++ S P C S SE +VQ+ G+++ V A+
Sbjct: 196 SQAGSLIGASGKTIKEIRNDSGATIKILPQNLS-PICASASETDRLVQISGEVSQVLKAL 254
Query: 259 AIISSRLRESQHRD 272
I LRE R+
Sbjct: 255 DHIGVTLREHPPRE 268
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 165/369 (44%), Gaps = 47/369 (12%)
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+++ P + + VFRML P KVG +IG ++ + E +K+ D G+ ++ +
Sbjct: 35 VAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 94
Query: 396 TISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCL 446
IS++E P + PA + LL + RI+D G + D ++T+LLVP+S+ G L
Sbjct: 95 MISAKEEPGSSVPPAVDGLLRVHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAGSL 153
Query: 447 EGRD-GSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
G+ G++ ++ ++ +++L E++P D +V++VG+ AL + + LR
Sbjct: 154 IGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRK 213
Query: 506 YL----------------------YRDFFQKETPPSSTGPTGSALVVEAASPIDITPARE 543
+L + Q PP P + P R+
Sbjct: 214 FLVDRGVIPIFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGPPSQYMPPPRQ 273
Query: 544 VQTVTDPPAATHQSVQIPATSQPSKE-AAGSVSETVKQNESERREDVPTVINRVPLPLVT 602
+ + PPA + P QP + +A ++ + S + P++ VT
Sbjct: 274 LDSYY-PPA----EMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSI--------VT 320
Query: 603 RSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVER 662
+ T ++ +P +I + ++ SGA+V++ E + + ++ISGT QV+
Sbjct: 321 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQT 380
Query: 663 AQSVLQGFI 671
AQ ++Q F+
Sbjct: 381 AQQLIQNFM 389
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +R+L K GG+IG+ G IK I + T A + + + PG +R + IS
Sbjct: 39 KWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMIS- 97
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P +P PA + L +H RI++ G E + GV G
Sbjct: 98 -AKEEPGSSVP---PAVDGLLRVHKRIID--------GLESDFTHAPSGVAG-------- 137
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+V+T+++V G L+GK G ++ ++ + +R+L + LP + +V+VVGD
Sbjct: 138 KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPIFALQDDRVVEVVGD 196
Query: 251 INNVKNAVAIISSRLRE 267
V A+ +I+S LR+
Sbjct: 197 PTGVHKALELIASHLRK 213
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 24/350 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG ++ + E +K+ D G+ E+ + +S++E
Sbjct: 42 PGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKE 101
Query: 402 GPDDELFPAQEALLHIQTRIVD-LGADKDNI-----ITTRLLVPSSEIGCLEGRD-GSLS 454
PD L PA + LL + RIVD L D ++ ++TRLLV +S+ G L G+ G++
Sbjct: 102 EPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVK 161
Query: 455 EMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY-------- 506
++ ++ +++L E++P D +V++VGE A+ + + LR +
Sbjct: 162 SIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIP 221
Query: 507 LYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQP 566
L+ Q PP P P + P P + + P
Sbjct: 222 LFEMQMQMSNPPIEHMPPHQPW----GPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYP 277
Query: 567 SKEAAGSVSETVKQNESERREDVP----TVINRVPLP-LVTRSTLEVVLPDYAVPKLITK 621
E V + Q S +VP + P P ++T+ T ++ +P +I
Sbjct: 278 PPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGT 337
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ ++ SGA+V++ E + + ++I+GT QV+ AQ ++Q F+
Sbjct: 338 AGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFM 387
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+++++I R P + + +R+L K G +IG+ G IK I + T A I
Sbjct: 29 DDDSAIGGGEKRWPGWPGE------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 82
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + PG ER + +S + +P+ +P PA + L +H RI++ G G+
Sbjct: 83 ILDGPPGTAERAVMVS--AKEEPDSSLP---PAMDGLLKVHKRIVD-----GLEGDSSHM 132
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
GG +V+TR++V+ G L+GK G ++ ++ + +R+L +
Sbjct: 133 PPGG-------------KVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-D 178
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
LP + +V+VVG+ V AV +I+S LR+
Sbjct: 179 LPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK 212
>gi|297605767|ref|NP_001057572.2| Os06g0342500 [Oryza sativa Japonica Group]
gi|255677019|dbj|BAF19486.2| Os06g0342500 [Oryza sativa Japonica Group]
Length = 96
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 64/83 (77%)
Query: 594 NRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQI 653
R +PLVTRSTLEVV+P AV L ++ + L + SEMSGA+V+L + +P+ +K+++I
Sbjct: 9 TRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRI 68
Query: 654 SGTPEQVERAQSVLQGFILSTQD 676
SGTPEQ ++AQS+LQGFILS QD
Sbjct: 69 SGTPEQADKAQSLLQGFILSIQD 91
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 163/371 (43%), Gaps = 67/371 (18%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG +++ + E +K+ D G+ E+ + +S +E
Sbjct: 172 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 231
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKD-------NIITTRLLVPSSEIGCLEGRD-GSL 453
P+ L P+ + LL + RIVD G D + + ++TRLLVP+S+ G L G+ G++
Sbjct: 232 EPESSLPPSMDGLLRVHMRIVD-GLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTV 290
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR---- 509
++ ++ +++L E++P D +V++VGE + AL + + LR +L
Sbjct: 291 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDRSII 350
Query: 510 DFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
FF+ + P R++ + P HQ+ P PS
Sbjct: 351 PFFENQM---------------------QKPTRQMDHMPAP----HQAWGPPQGHAPSVG 385
Query: 570 AAGSVSETVKQNESERREDV---PTVINRVPL-------------------------PLV 601
G + R D P + + P+ P+V
Sbjct: 386 GGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMV 445
Query: 602 TRS-TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
+ T ++ +P +I S + ++ +SGA+V++ E + + +++SGT QV
Sbjct: 446 AQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQV 505
Query: 661 ERAQSVLQGFI 671
+ A ++Q F+
Sbjct: 506 QTAMQLIQNFM 516
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 148/362 (40%), Gaps = 67/362 (18%)
Query: 44 NNNNNTNNIMNNNTSINNSNNRANSN---------PKDPSLMVTTTYRILCHDMKAGGVI 94
+N ++ + + + I+ S ++ S + P T +R+L K G +I
Sbjct: 134 HNGDDVQDKVEDEEGISESLQKSESEEGATVGGEEKRWPGWPGETVFRMLVPAQKVGSII 193
Query: 95 GKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIH 154
G+ G +IK I + T A I + + PG ER + +S + +PE +P P+ + L +H
Sbjct: 194 GRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSG--KEEPESSLP---PSMDGLLRVH 248
Query: 155 DRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKII 214
RI++ G GE + ++V+TR++V G L+GK G +
Sbjct: 249 MRIVD-----GLDGEPSQ-------------APPASKVSTRLLVPASQAGSLIGKQGGTV 290
Query: 215 EQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRS 274
+ ++ + +R+L LP + +V+VVG+ +V A+ +I+S LR+ DRS
Sbjct: 291 KAIQEASACIVRVL-GSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFL-VDRS 348
Query: 275 ---HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY------------RSNN 319
F ++ P R D++P + P G Y R ++
Sbjct: 349 IIPFFENQMQKPTRQM---DHMPAPHQAWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDS 405
Query: 320 YGPRP------------SGYSIEAGAAPMS---DSVQPFYGEDLVFRMLCPIDKVGRVIG 364
Y P P G S PM+ S P + + +M P+ VIG
Sbjct: 406 YYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIG 465
Query: 365 ES 366
S
Sbjct: 466 TS 467
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 67/371 (18%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG +++ + E +K+ D G+ E+ + +S +E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKD-------NIITTRLLVPSSEIGCLEGRD-GSL 453
P+ L P+ + LL + RIVD G D + + ++TRLLVP+S+ G L G+ G++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVD-GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTV 299
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR---- 509
++ ++ +++L E++P D +V++VGE + AL + + LR +L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSII 359
Query: 510 DFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
FF+ + P R++ + P HQS P PS
Sbjct: 360 PFFENQM---------------------QKPTRQMDHMPPP----HQSWGPPQGHAPSVG 394
Query: 570 AAGSVSETVKQNESERREDV---PTVINRVPL-------------------------PLV 601
G + R D P + + P+ P+V
Sbjct: 395 GGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMV 454
Query: 602 TRS-TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
+ T ++ +P +I S + ++ +SGA+V++ E + + +++SGT QV
Sbjct: 455 AQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQV 514
Query: 661 ERAQSVLQGFI 671
+ A ++Q F+
Sbjct: 515 QTAVQLIQNFM 525
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 135/318 (42%), Gaps = 58/318 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
T +R+L K G +IG+ G +IK I + T A I + + PG ER + +S + +PE
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSG--KEEPES 244
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P P+ + L +H RI++ G GE + ++V+TR++V
Sbjct: 245 SLP---PSMDGLLRVHMRIVD-----GLDGEASQ-------------APPPSKVSTRLLV 283
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G L+GK G ++ ++ + +R+L + LP + +V+VVG+ +V A+
Sbjct: 284 PASQAGSLIGKQGGTVKAIQEASACIVRVLGSE-DLPVFALQDDRVVEVVGEPTSVHRAL 342
Query: 259 AIISSRLRESQHRDRS---HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+I+S LR+ DRS F ++ P R D++P + + P G Y
Sbjct: 343 ELIASHLRKFL-VDRSIIPFFENQMQKPTRQM---DHMPPPHQSWGPPQGHAPSVGGGGY 398
Query: 316 ------------RSNNYGPRP------------SGYSIEAGAAPMS---DSVQPFYGEDL 348
R ++Y P P G S PM+ S P + +
Sbjct: 399 GHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQV 458
Query: 349 VFRMLCPIDKVGRVIGES 366
+M P+ VIG S
Sbjct: 459 TQQMQIPLSYADAVIGTS 476
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 67/371 (18%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P KVG +IG +++ + E +K+ D G+ E+ + +S +E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKD-------NIITTRLLVPSSEIGCLEGRD-GSL 453
P+ L P+ + LL + RIVD G D + + ++TRLLVP+S+ G L G+ G++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVD-GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTV 299
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR---- 509
++ ++ +++L E++P D +V++VGE + AL + + LR +L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSII 359
Query: 510 DFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
FF+ + P R++ + P HQS P PS
Sbjct: 360 PFFENQM---------------------QKPTRQMDHMPPP----HQSWGPPQGHAPSVG 394
Query: 570 AAGSVSETVKQNESERREDV---PTVINRVPL-------------------------PLV 601
G + R D P + + P+ P+V
Sbjct: 395 GGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMV 454
Query: 602 TRS-TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
+ T ++ +P +I S + ++ +SGA+V++ E + + +++SGT QV
Sbjct: 455 AQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQV 514
Query: 661 ERAQSVLQGFI 671
+ A ++Q F+
Sbjct: 515 QTAVQLIQNFM 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 135/318 (42%), Gaps = 58/318 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
T +R+L K G +IG+ G +IK I + T A I + + PG ER + +S + +PE
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSG--KEEPES 244
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P P+ + L +H RI++ G GE + ++V+TR++V
Sbjct: 245 SLP---PSMDGLLRVHMRIVD-----GLDGEASQ-------------APPPSKVSTRLLV 283
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G L+GK G ++ ++ + +R+L + LP + +V+VVG+ +V A+
Sbjct: 284 PASQAGSLIGKQGGTVKAIQEASACIVRVLGSE-DLPVFALQDDRVVEVVGEPTSVHRAL 342
Query: 259 AIISSRLRESQHRDRS---HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+I+S LR+ DRS F ++ P R D++P + + P G Y
Sbjct: 343 ELIASHLRKFL-VDRSIIPFFENQMQKPTRQM---DHMPPPHQSWGPPQGHAPSVGGGGY 398
Query: 316 ------------RSNNYGPRP------------SGYSIEAGAAPMS---DSVQPFYGEDL 348
R ++Y P P G S PM+ S P + +
Sbjct: 399 GHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQV 458
Query: 349 VFRMLCPIDKVGRVIGES 366
+M P+ VIG S
Sbjct: 459 TQQMQIPLSYADAVIGTS 476
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
ML P KVG +IG ++ + E +K+ D G+ E+ + +S++E PD L PA
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 412 EALLHIQTRIVD-LGADKDNI-------ITTRLLVPSSEIGCLEGRD-GSLSEMRRSTGA 462
+ LL + RI+D L +D N ++TRLLVP+S+ G L G+ G++ ++ ++
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY-RDFF--------- 512
+++L E++P D +V+++GE A+ + + LR +L R
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQM 180
Query: 513 -----------QKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIP 561
Q PP P +P + P R++ PPA ++
Sbjct: 181 SNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDNYY-PPADMPPLME-- 237
Query: 562 ATSQPSKEAAGSVSET-VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLIT 620
QP + + E + + S + P++I ++ T ++ +P +I
Sbjct: 238 --KQPHQGISAYGREAPMGSHASSNAQAAPSMITQI--------TQQMQIPLSYADAVIG 287
Query: 621 KSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ ++ SGA+V++ E + ++ISGT QV+ AQ ++Q F+
Sbjct: 288 TAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFM 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS 142
+L K G +IG+ G IK I + T A I + + PG ER + +S + +P+ +P
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVS--AKEEPDSSLP- 57
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
PA + L +H RI++ G + G +V+TR++V
Sbjct: 58 --PAMDGLLRVHKRIID-----GLDSDSSNT-----------PPTSGAKVSTRLLVPASQ 99
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
G L+GK G ++ ++ + +R+L + LP + +V+V+G+ V AV +I+
Sbjct: 100 AGSLIGKQGGTVKSIQEASTCIVRVLGAE-DLPVFALQDDRVVEVLGEAAGVHKAVELIA 158
Query: 263 SRLRE 267
S LR+
Sbjct: 159 SHLRK 163
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 161/371 (43%), Gaps = 45/371 (12%)
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
E G ++ P + + VFRML P KVG +IG V+ + E +K+ D + G
Sbjct: 32 EIGTGTGAEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSG 91
Query: 390 SDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK--------DNIITTRLLVPSS 441
+ E+++ +S++E PD + PA + +L + RI++ G D+ TRLL+
Sbjct: 92 TPERVVMVSAKEEPDATISPAMDGILKVHKRIIE-GIDEVGRTQQAAGGPTITRLLLAGI 150
Query: 442 EIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVT 500
+ G L G+ G+ + ++ ++G +++ E++P C D++++I GE AL V
Sbjct: 151 QSGSLIGKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVV 210
Query: 501 TRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQI 560
+ LR +L S L + + ++ Q ++ P + +Q+ +
Sbjct: 211 SHLRKFLVDR---------------SVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSL 255
Query: 561 PATSQPSKEAAGSVSETVKQNESERREDVP--------------------TVINRVPLPL 600
P + + + D+P +V N P P+
Sbjct: 256 PNSGSGFGNNSKYTPTAPPHDNYYAPSDLPPETHSHHGLNMYGRDPLGGHSVPNAAPAPV 315
Query: 601 VTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
+T+ + + +P +I + ++ SGA +++ E + + ++I GT QV
Sbjct: 316 ITQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEETRGVPGEMTVEIHGTASQV 375
Query: 661 ERAQSVLQGFI 671
+ AQ ++Q F+
Sbjct: 376 QTAQQLIQNFM 386
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P +R+L K GG+IG+ G +K + + T + I + + + G ER++ +S
Sbjct: 42 KWPGWPGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSA 101
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
D + SPA + + +H RI+E G G ++ GG
Sbjct: 102 KEEPD-----ATISPAMDGILKVHKRIIE---GIDEVGRTQQAAGG-------------- 139
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++++ + G L+GK G I+ ++ + +++ + +P C ++++++ G+
Sbjct: 140 PTITRLLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGSE-DIPYCALADDKVLEIQGE 198
Query: 251 INNVKNAVAIISSRLRE 267
NV A+ ++ S LR+
Sbjct: 199 PANVHKALELVVSHLRK 215
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
LG+G +E + ET ++R+ V +E++++ GD ++ A+ +SS L+
Sbjct: 156 LGRG--TLEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSSYLQ 213
Query: 267 ESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSG 326
H + +P FP + S NYG SG
Sbjct: 214 GDLHA--CSLTTSVTTPSPMFP---------------------WKSSEVPEPNYGDLHSG 250
Query: 327 YSIEAGA--APMSDSVQPFYG-------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
S + P D Q G + + FR+LC ++ G +IG+ I++ + E
Sbjct: 251 VSTKCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETET 310
Query: 378 GVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII----- 432
G + V +P G E++ITIS+ E P Q A+L I R+ ++ + N++
Sbjct: 311 GASIDVGNPFSGCMERVITISALESPGKH-SKVQSAILCIFDRMEEV---ERNLMFGKPE 366
Query: 433 -TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
+ R+LVP S+ L G G+ + EM +STGA I+IL +VPAC S + ++Q
Sbjct: 367 CSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQ 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 34 QPNNNYRHRGNNNNNTN-NIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGG 92
+PN H G + N N+ + + + N N + ++R+LCH AGG
Sbjct: 241 EPNYGDLHSGVSTKCANINVPWIDCPQDVAGNVETEN------LQQISFRLLCHVNLAGG 294
Query: 93 VIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFL 152
+IGK G IIK TGA I+V G ER+I IS ++ Q A+
Sbjct: 295 LIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESPGKHSKV------QSAILC 348
Query: 153 IHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGK 212
I DR+ E + F G + R++V + L+G GG
Sbjct: 349 IFDRMEEVERNLMF---------------------GKPECSARVLVPKSQFSSLVGLGGA 387
Query: 213 IIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
II++M T +I IL + +P C S E ++Q
Sbjct: 388 IIKEMVKSTGARIEIL-DEMDVPACASNCERVLQ 420
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 11/185 (5%)
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
AP S+ P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++
Sbjct: 64 APASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDR 123
Query: 394 IITISSEEGPDDELFPAQEALLHIQTRIVDL----------GADKDNIITTRLLVPSSEI 443
I+ IS E P+ L PA +A++ + R+ L GA + RLLV S++
Sbjct: 124 IVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQA 183
Query: 444 GCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
L G+ GSL ++ STGA++++LS +EVP + + +V++ GE + AL V
Sbjct: 184 INLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGH 243
Query: 503 LRSYL 507
LR +L
Sbjct: 244 LRKFL 248
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S K P +R++ +K G +IG+ G +IK + + T A I V + G +RI+
Sbjct: 67 SEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVL 126
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRIL---ESDGGGGFYGEEEEEYGGGGGVGGGG 184
IS R +PE + SPA +A+ + R+ ES+G G Y G G
Sbjct: 127 ISG--REEPEAPL---SPAMDAVIRVFKRVTGLSESEGDGKAY-----------GAAGVA 170
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
F + R++V+ L+GK G +I+ ++ T +R+L D +P + E I
Sbjct: 171 F------CSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE-VPFYAAADERI 223
Query: 245 VQVVGDINNVKNAVAIISSRLRE 267
V++ G+ V+ A+ + LR+
Sbjct: 224 VELQGEALKVQKALEAVVGHLRK 246
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 24/351 (6%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
E + FRML P KVG +IG ++ + E +K+ D G+ E+ + +S++E PD
Sbjct: 126 ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 185
Query: 406 ELFPAQEALLHIQTRIVD-LGADKDNI-----ITTRLLVPSSEIGCLEGRD-GSLSEMRR 458
L PA + LL + RIVD L D ++ ++TRLLV +S+ G L G+ G++ ++
Sbjct: 186 SLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQE 245
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--------LYRD 510
++ +++L E++P D +V++VGE A+ + + LR + L+
Sbjct: 246 ASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEM 305
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEA 570
Q PP P P + P P + + P E
Sbjct: 306 QMQMSNPPIEHRPPHQPW----GPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPEL 361
Query: 571 AGSVSETVKQNESERREDVP----TVINRVPLP-LVTRSTLEVVLPDYAVPKLITKSKTL 625
V + Q S +VP + P P ++T+ T ++ +P +I +
Sbjct: 362 PPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGAS 421
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
++ SGA+V++ E + + ++I+GT QV+ AQ ++Q L D
Sbjct: 422 ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFLPVFD 472
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R+L K G +IG+ G IK I + T A I + + PG ER + +S + +P+ +
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSA--KEEPDSSL 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
P PA + L +H RI++ G G+ GG +V+TR++V+
Sbjct: 188 P---PAMDGLLKVHKRIVD-----GLEGDSSHMPPGG-------------KVSTRLLVAA 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
G L+GK G ++ ++ + +R+L + LP + +V+VVG+ V AV +
Sbjct: 227 SQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPIFALQDDRVVEVVGEPIGVHKAVEL 285
Query: 261 ISSRLRE 267
I+S LR+
Sbjct: 286 IASHLRK 292
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 169/371 (45%), Gaps = 47/371 (12%)
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
A +++ P + + VFRML P KVG +IG ++ + E +K+ D G+ ++
Sbjct: 30 AVVAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQR 89
Query: 394 IITISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIG 444
+ IS++E P + PA + LL I RI+D G + D ++T+LLVP+S+ G
Sbjct: 90 AVMISAKEEPGSSVPPAVDGLLRIHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAG 148
Query: 445 CLEGRD-GSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
L G+ G++ ++ ++ +++L E++P D +V++VG+ AL + + L
Sbjct: 149 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
Query: 504 RSYLY---------------RDFFQKETPP-SSTGPTGSALVVEAASPID------ITPA 541
R +L + PP S GP+ P + P
Sbjct: 209 RKFLVDRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGPPSQYMPPP 268
Query: 542 REVQTVTDPPAATHQSVQIPATSQPSKE-AAGSVSETVKQNESERREDVPTVINRVPLPL 600
R++ + P+A + P QP + +A ++ + S + P++
Sbjct: 269 RQLDSYY--PSA---EMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSI-------- 315
Query: 601 VTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
VT+ T ++ +P +I + ++ SGA+V++ E + + ++ISGT QV
Sbjct: 316 VTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQV 375
Query: 661 ERAQSVLQGFI 671
+ AQ ++Q F+
Sbjct: 376 QTAQQLIQNFM 386
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +R+L K GG+IG+ G IK I + T A + + + PG +R + IS
Sbjct: 36 KWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMIS- 94
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P +P PA + L IH RI++ G E + GV G
Sbjct: 95 -AKEEPGSSVP---PAVDGLLRIHKRIID--------GLESDFTHAPSGVAG-------- 134
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+V+T+++V G L+GK G ++ ++ + +R+L + LP + +V+VVGD
Sbjct: 135 KVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPIFALQDDRVVEVVGD 193
Query: 251 INNVKNAVAIISSRLRE 267
V A+ +I+S LR+
Sbjct: 194 PAGVHKALELIASHLRK 210
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 57/372 (15%)
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ D++ P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 109 VDDNIWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV 168
Query: 396 TISSEEGPDDELFPAQEALLHIQTRIVDLGADKD--------NIITTRLLVPSSEIGCLE 447
IS+++ PD L PA + LL + RI D + NI TRLLVPSS+ G L
Sbjct: 169 MISAKDEPDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLI 228
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E VP D +V+I GE + A+ +++ LR +
Sbjct: 229 GKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKF 286
Query: 507 LYR----DFF------------QKETPPSSTGPTGSAL--------VVEAASPIDITPAR 542
L F Q PP GP + + P R
Sbjct: 287 LVDRSVLPLFEAHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPPR 346
Query: 543 EVQTVTDPP---AATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLP 599
+ PP H + P A+ + ++ S+ D+ +PL
Sbjct: 347 PQDSYYPPPDVEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDM-----HIPLA 401
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
+I + ++ SGA+V++ E + ++I+GT Q
Sbjct: 402 YAD--------------AVIGAAGASISYIRRHSGATVTIQESRGAPGDMTVEITGTAAQ 447
Query: 660 VERAQSVLQGFI 671
V+ AQ ++Q F+
Sbjct: 448 VQTAQQLIQNFM 459
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 31/259 (11%)
Query: 9 NYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANS 68
N Y D+++ T +YN P ++Y+ N + N +NN ++ N
Sbjct: 58 NPYNDYEEQANLYSEETGNQYNE--DPADSYQEEHENAFSGGINQQGNLQVNNVDD--NI 113
Query: 69 NPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI 128
P P + +RIL K G +IG+ G IK + + T A I + + PG ER + I
Sbjct: 114 WPGWPG---ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI 170
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
S + +P+ + SPA + L +H RI +S GE + R
Sbjct: 171 S--AKDEPDAPL---SPAMDGLLRVHKRITDSSD-----GESSQPQ-----------RSA 209
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
GN TR++V G L+GK G I+ ++ +K+ +RI+ ++P + +V++
Sbjct: 210 GNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV---ENVPPVALNDDRVVEIQ 266
Query: 249 GDINNVKNAVAIISSRLRE 267
G+ V+ AV +ISS LR+
Sbjct: 267 GEPLGVQKAVELISSHLRK 285
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 84/171 (49%), Gaps = 33/171 (19%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS---DTRRRD 135
T YR+L K G VIGK+G+I+K+IR TGA I V E +P +ER+I IS D R
Sbjct: 103 TVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARH- 161
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
AQEALF +H R+ E EE G TR
Sbjct: 162 -------TDAAQEALFKVHARV-----------HEHEE----------GPHPPPANATTR 193
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
M+V GCL+GK G II+++R + I+ILP + LP C ++ +VQ
Sbjct: 194 MLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAE-DLPPCGLSNDRVVQ 243
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
+ V+R+L KVG VIG++ IV+ +++E G ++V + V DE++I IS+
Sbjct: 102 ETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARH 161
Query: 407 LFPAQEALLHIQTRIVDLGADKDNI---ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
AQEAL + R+ + TTR+LV ++ GCL G+ G+ + E+R ++GA
Sbjct: 162 TDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGA 221
Query: 463 NIQILSREEVPACVSGTDELVQ 484
+I+IL E++P C D +VQ
Sbjct: 222 HIKILPAEDLPPCGLSNDRVVQ 243
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 207/476 (43%), Gaps = 66/476 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE--RIIEISDTRRRDPE 137
T+RILC+ +AG VIGK G ++K + + T + I V E P D+ RII+I
Sbjct: 31 TFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWV-EKTPLDDSPYRIIKIF-------- 81
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF-RGGGNRVATRM 196
G + S S + + + + E +Y F + V+ +
Sbjct: 82 GHVGSVSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNFGDCTSSTVSCNL 141
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMET--KTQIRILPRDHSLPRCVSMSEEIVQVVGD-INN 253
++ HV ++GK G++++++ ET + I+ L S R + + ++ G+ ++
Sbjct: 142 LMEGSHVVTVIGKNGELMQRILEETGCNSLIKALLFGSSSCRIIHGTYARDKIEGNRLSA 201
Query: 254 VKNAVAIISSRL--------------------------RESQHRDRSHFHGRLHSPDRFF 287
V A+ ISSRL R Q+R+ HG LH
Sbjct: 202 VMKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDP-HGSLHRHVEIS 260
Query: 288 PDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED 347
+D V T +P +D ++R + +I+ P+ S D
Sbjct: 261 QEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKNPPVTIKQ---PLQASKDDIRQVD 317
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L ++LC ES +V ++ + V D DE+++TI++ E D
Sbjct: 318 L--KILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDIT 367
Query: 408 FPAQEALLHI--------QTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRR 458
+Q AL+ + +++D G IT RL+V S++I CL G +G + + +++
Sbjct: 368 SESQRALVLVFSNMYENATAKVLDSGLTSS--ITARLVVRSNQINCLLGEEGRIKTTIQQ 425
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQK 514
TGA I +L+ E+ P CVS +++VQI GE R+A+ +VT+ LR L FQ+
Sbjct: 426 RTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQR 481
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 47/247 (19%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-ADPVDGSDEQIITISSEEGPD 404
E + FR+LC + + G VIG+ G+V+ L + V P+D S +II I G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 405 DEL-----------------------FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSS 441
+ AQ AL+ + ++ G + ++ LL+ S
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRV-FEALNFGDCTSSTVSCNLLMEGS 146
Query: 442 EIGCLEGRDGSLSE-MRRSTGANIQI---LSREEVPACVSGTDELVQIVG-EIQAARDAL 496
+ + G++G L + + TG N I L + GT +I G + A AL
Sbjct: 147 HVVTVIGKNGELMQRILEETGCNSLIKALLFGSSSCRIIHGTYARDKIEGNRLSAVMKAL 206
Query: 497 VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAA-SPIDITPA--REVQTVTDPPAA 553
V +++RL++ PP ST + V +A P++ REV DP +
Sbjct: 207 VSISSRLQA----------CPPISTASLHAEAVPDALRRPMEYRSQQYREV----DPHGS 252
Query: 554 THQSVQI 560
H+ V+I
Sbjct: 253 LHRHVEI 259
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 13/181 (7%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+D P + D VFR+L P+ KVG +IG ++ + E +K+ D G E+ +
Sbjct: 103 NDKRWPGWPGDSVFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVM 162
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLE 447
IS+++ PD+++ PA + LL I RI D G+D + + TRLLVP+S+ G L
Sbjct: 163 ISAKDEPDEQISPAMDGLLRIHKRIAD-GSDGEFGQTQRGTGTMGPTRLLVPASQAGSLI 221
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ A ++I+ E VP D +V+I GE + + A+ + + LR +
Sbjct: 222 GKQGATIKSIQDSSKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKF 279
Query: 507 L 507
L
Sbjct: 280 L 280
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 34 QPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGV 93
+P N Y N N ++ ++ + P + +RIL K G +
Sbjct: 69 EPENQYNEEPAGPYQEENAFNGEVKQQDNLQVEANDKRWPGWPGDSVFRILVPVHKVGAI 128
Query: 94 IGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLI 153
IG+ G IK + + + A I + + PG ER + IS D + SPA + L I
Sbjct: 129 IGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQ-----ISPAMDGLLRI 183
Query: 154 HDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKI 213
H RI +DG G +G+ + RG G TR++V G L+GK G
Sbjct: 184 HKRI--ADGSDGEFGQTQ--------------RGTGTMGPTRLLVPASQAGSLIGKQGAT 227
Query: 214 IEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
I+ ++ +K +RI+ ++P + +V++ G+ +V+ AV +I+S LR+
Sbjct: 228 IKSIQDSSKAVVRIV---ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRK 278
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 32/193 (16%)
Query: 56 NTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH 115
N++ N+SN N + T+R+LCH + G +IGKSG +IKS+++ TGA I +
Sbjct: 5 NSNPNHSNAHVN---RSRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIV 61
Query: 116 ELIPGDEERIIEISD-TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEY 174
+ P +R+I +S + D E S AQEAL + DR+L+
Sbjct: 62 DAPPDSPDRVILVSAPSVTEDGE-----LSTAQEALLKVFDRVLDV-------------- 102
Query: 175 GGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
G G V+ R++ VG ++GK GK++E++RM+T +IR+L + L
Sbjct: 103 -------AAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRMDTGCKIRVL--NEGL 153
Query: 235 PRCVSMSEEIVQV 247
P + S+EIV+V
Sbjct: 154 PAGTAPSDEIVEV 166
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEG 402
Y + FR+LC +VG +IG+S +++ LQ G +++ D P D D I+ +
Sbjct: 21 YTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVT 80
Query: 403 PDDELFPAQEALLHIQTRIVDLGADK---DNIITTRLLVPSSEIGCLEGRDGSLSE-MRR 458
D EL AQEALL + R++D+ A D +++ RLL +S++G + G+ G + E +R
Sbjct: 81 EDGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRM 140
Query: 459 STGANIQILSREEVPACVSGTDELVQI 485
TG I++L+ E +PA + +DE+V++
Sbjct: 141 DTGCKIRVLN-EGLPAGTAPSDEIVEV 166
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 24/347 (6%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
SD P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++++
Sbjct: 70 SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVL 129
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD----NIITTRLLVPSSEIGCLEGRDGS 452
IS +E + L PA +A++ + R+ L ++D + + RLLV S++ L G+ GS
Sbjct: 130 ISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 189
Query: 453 L-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD- 510
L ++ STGA++++LS +E+P + +V++ GE AL V LR +L
Sbjct: 190 LIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHS 249
Query: 511 ---FFQKE--TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQ 565
F+K TP S T + A +T ++ + + P+ +S+ + +
Sbjct: 250 VLPLFEKSFNTPASQDRQTETW----ADKSSLLTASQSIISAEYAPSTKRESLFLDREAH 305
Query: 566 PSKEAAGSVSETVKQNESERREDVPTV----INRVPLPLVTRSTLEVVLPDYAVPKLITK 621
+ S Q+ +PT+ + R P+VT+ T + +P +I
Sbjct: 306 FDSHISSSGISLYGQDRV-----LPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGV 360
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQ 668
T + SGA +++ E + + ++I GT QV+ AQ ++Q
Sbjct: 361 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 147/363 (40%), Gaps = 55/363 (15%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD 121
SN+ S+ K P +R++ +K G +IG+ G +IK + + T A I V + G
Sbjct: 64 SNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 123
Query: 122 EERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVG 181
+R++ IS + SPA +A+ + R+ G E+E
Sbjct: 124 PDRVVLISGKEELESP-----LSPAMDAVIRVFKRV------SGLSENEDE--------- 163
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
+ + R++V+ L+GK G +I+ ++ T +R+L D +P
Sbjct: 164 -----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE-MPFYAGAD 217
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRE--SQHRDRSHFHGRLHSP---DRFFPDDDYVPHM 296
E +V++ G+ V A+ + LR+ H F ++P DR + +
Sbjct: 218 ERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDR--QTETWADKS 275
Query: 297 NNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPI 356
+ S+ A ++ S R + + R + + ++ +S YG+D R+L I
Sbjct: 276 SLLTASQSIISAEYAPSTKRESLFLDREAHFDSHISSSGIS-----LYGQD---RVLPTI 327
Query: 357 DKVGRVIGESEG-IVELLQNEIGVDLKVADPVDG-----------SDEQIITISSEEGPD 404
G +G S G IV + + + L A+ + G + I+TI G
Sbjct: 328 RSSG--VGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLP 385
Query: 405 DEL 407
DE+
Sbjct: 386 DEI 388
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 32/361 (8%)
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ D+ P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 219 VDDNKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV 278
Query: 396 TISSEEGPDDELFPAQEALLHIQTRIVDLGADKD--------NIITTRLLVPSSEIGCLE 447
IS+++ PD L PA + LL + RI D + NI TRLLVPSS+ G L
Sbjct: 279 MISAKDEPDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLI 338
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E VP D +V+I GE ++A+ +++ LR +
Sbjct: 339 GKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKF 396
Query: 507 LY-RDFF---------------QKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDP 550
L R Q PP GP + + P Q +
Sbjct: 397 LVDRSVLPLFEAHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPR 456
Query: 551 PAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVL 610
P Q P+ P E + E+ T N+ P ++ ++ +
Sbjct: 457 P----QDSYYPSPDVPHMEKQPHYGISAYGREAPPSGASATG-NQPPSHAGSQVAHDMHI 511
Query: 611 PDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGF 670
P +I + ++ SGA+V++ E + + ++I+GT QV+ AQ ++Q F
Sbjct: 512 PLAYADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEITGTAAQVQTAQQLIQNF 571
Query: 671 I 671
+
Sbjct: 572 M 572
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 9 NYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANS 68
N Y D+++ T RYN P ++Y+ N + +N +NN ++
Sbjct: 168 NPYNDYEEQANLYSEETGNRYNE--DPADSYQEEQENAFSGGINQQDNLQVNNVDDN--- 222
Query: 69 NPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI 128
K P + +RIL K G +IG+ G IK + + T A I + + PG ER + I
Sbjct: 223 --KWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI 280
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
S + +P+ + SPA + L +H RI +S G + R
Sbjct: 281 S--AKDEPDAPL---SPAMDGLLRVHKRITDSSDGESSQPQ----------------RSA 319
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
GN TR++V G L+GK G I+ ++ +K+ +RI+ ++P + +V++
Sbjct: 320 GNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV---ENVPPVALNDDRVVEIQ 376
Query: 249 GDINNVKNAVAIISSRLRE 267
G+ V+ AV +ISS LR+
Sbjct: 377 GEPLGVQEAVELISSHLRK 395
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 166/361 (45%), Gaps = 50/361 (13%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P+ KVG +IG ++ L E +K+ D G+ E+ + +S++E
Sbjct: 34 PGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKE 93
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDN----IITTRLLVPSSEIGCLEGRDGS-LSEM 456
PD + PA + LL + I+D+ +D + +++TRLLV +++ G L G+ G+ + +
Sbjct: 94 EPDAPIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSI 153
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY-----RDF 511
+ ++ +++L E +P D +V+I GE + A+ + + LR +L + F
Sbjct: 154 QEASNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVF 212
Query: 512 FQKETPPSSTG----PTGSALVVEAASPID-------------ITPAREVQTVTDPPAAT 554
+ P++ G P + PI+ + P ++ PPA T
Sbjct: 213 EMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNYYPPPAQT 272
Query: 555 ----HQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVL 610
H Q P + + S S T +Q +++N++ T + +
Sbjct: 273 PLDQHHHHQGPPYGRETGAGVSSPSLTPQQ----------SIVNKI--------TQYMQV 314
Query: 611 PDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGF 670
P +I S ++ SGA++++ E + + ++I+G+ QV+ AQ ++Q F
Sbjct: 315 PLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQLIQNF 374
Query: 671 I 671
+
Sbjct: 375 M 375
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 55/331 (16%)
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE 122
N+ + K P +R+L K G +IG+ G IK + + T A I + + PG
Sbjct: 24 NDGSGGGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTS 83
Query: 123 ERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
ER + +S D +PA + L +H I++ E + GV
Sbjct: 84 ERAVMVSAKEEPD-----APIAPAIDGLLRVHKCIMDV----------ESDVPSAAGV-- 126
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
V+TR++V G L+GK G I+ ++ + +R+L +LP ++
Sbjct: 127 --------MVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVL--GENLPLFALQND 176
Query: 243 EIVQVVGDINNVKNAVAIISSRLRESQHRDRS---HFHGRLHSP-----DRFFPDDDYVP 294
+V++ G+ +V AV +I+S LR+ DRS F + P + P + P
Sbjct: 177 TVVEIQGEPASVHKAVELIASNLRKFL-VDRSVIKVFEMEMQKPNTQGNENMPPQQSWDP 235
Query: 295 HMN---NTARRPS-MDGARFSGSNYRSNNYGPRPSG-------------YSIEAGAAPMS 337
NT P + ++ Y+ +NY P P+ Y E GA S
Sbjct: 236 SQVFPINTGGEPGFVPNLQYMQPPYQLDNYYPPPAQTPLDQHHHHQGPPYGRETGAGVSS 295
Query: 338 DSVQPFYG--EDLVFRMLCPIDKVGRVIGES 366
S+ P + M P+ VIG S
Sbjct: 296 PSLTPQQSIVNKITQYMQVPLSYADAVIGAS 326
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 8/174 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P+ KVG +IG + + + +K+ D G+ E+ + +S++E
Sbjct: 156 PGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKE 215
Query: 402 GPDDELFPAQEALLHIQTRIV-------DLGADKDNIITTRLLVPSSEIGCLEGRDGS-L 453
PD + PA + LL + ++V D + + TRLLV ++ G L G+ GS +
Sbjct: 216 EPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTI 275
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ +TG NI+IL E +P D +V+I GE A+ V LR +L
Sbjct: 276 KSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFL 329
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P +R+L K G +IG+ G I+ I + T A I + + PG ER + +S
Sbjct: 154 KWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVS- 212
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H +++ D G V
Sbjct: 213 -AKEEPDCSIP---PAVDGLLRVHKQVVNVD--------PHPADSASGAV---------R 251
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
V TR++V+ G L+GK G I+ + T IRIL +H LP + IV++ G+
Sbjct: 252 PVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEH-LPVFALRDDSIVEIQGE 310
Query: 251 INNVKNAVAIISSRLRE 267
+ V AV +++ LR+
Sbjct: 311 SSGVHKAVELVAIHLRK 327
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Query: 432 ITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
TTRLLVP+S IGCL G+ G++ +EMRR T ANI+ILS+E +P S DE+VQI G++
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLD 65
Query: 491 AARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEA 532
A+DAL++V TRLR+ + F +E S+ P L V A
Sbjct: 66 VAKDALMQVVTRLRA----NLFDREGAVSTFLPVLPYLPVSA 103
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 18/126 (14%)
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
TR++V +GCL+GKGG I+ +MR TK IRIL +++ LP+ S +E+VQ+ GD++
Sbjct: 8 TRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKEN-LPKVASEDDEMVQISGDLDV 66
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
K+A+ + +RL R++ R + F P Y+P S DG+ G
Sbjct: 67 AKDALMQVVTRL-------RANLFDREGAVSTFLPVLPYLP--------VSADGS--DGF 109
Query: 314 NYRSNN 319
NY S +
Sbjct: 110 NYESRD 115
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
FRM+C GR+IG +V LQN+ G + A P+ SD++++T+S+ E + P
Sbjct: 84 FRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSALENLESSHSP 143
Query: 410 AQEALLHIQTRIVD--------LGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRST 460
AQ ALL + R ++ LG ++ +T LL+PS+++ CL GR G + SEM +T
Sbjct: 144 AQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVDSEMIETT 203
Query: 461 GANIQILSREEVPACVSGTDELVQI 485
GA+IQI+ ++ S D +VQ+
Sbjct: 204 GADIQIMQGDQFFDLASKNDAVVQV 228
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE 122
N + + K P+ +R++C AG +IG GS++++++ TGA I I +
Sbjct: 66 NIATDGDHKKPNEQSQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSD 125
Query: 123 ERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
+R++ +S E S SPAQ AL L+ R +E D E G +
Sbjct: 126 DRLVTVSAL-----ENLESSHSPAQNALLLVFARSIEHD------IERARSLGLIEEI-- 172
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
V +++ V CL+G+GG++ +M T I+I+ D S ++
Sbjct: 173 --------TVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFD-LASKND 223
Query: 243 EIVQV 247
+VQV
Sbjct: 224 AVVQV 228
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 13/170 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGS-DEQIITISSEEGPDDE 406
L++R+LCP + G VIG++ V+ LQ + G +KV PVD + E++I I +++ D
Sbjct: 265 LLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIEAQDVDDPT 324
Query: 407 LF-PAQEALLHI-QTRIVD------LGADKDN--IITTRLLVPSSEIGCLEGRDGSLSE- 455
++ P+Q ALL I +T ++D +GA ++N I RLL+PSS+I + GR G++ E
Sbjct: 325 VWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSSQIRNVIGRFGNVIER 384
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGE-IQAARDALVEVTTRLR 504
+R +G+++++L E P C DE++QI E ++ AL +TT+LR
Sbjct: 385 IRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 22/199 (11%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEI 128
P++ T YR+LC + +AG VIGK+G +K +++ +GA I V + ER+I I
Sbjct: 256 PENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI 315
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
DP ++P+Q AL I + I+ G EE G
Sbjct: 316 EAQDVDDPT----VWAPSQIALLRIVETIVLDAERNTTIGAAEENNG------------- 358
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
+ R+++ + ++G+ G +IE++R+ + + +R+LP + PRC ++E++Q+
Sbjct: 359 --HIVIRLLLPSSQIRNVIGRFGNVIERIRVGSGSHVRVLPSSET-PRCAKRNDEVLQIS 415
Query: 249 GD-INNVKNAVAIISSRLR 266
+ + NV +A+A+I+++LR
Sbjct: 416 AESMENVASALAMITTQLR 434
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 324 PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
P IE +S+ P + + VFRML P KVG +IG ++ + E +K+
Sbjct: 61 PKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI--------ITTR 435
D G+ E+ + +S+++ PD PA + LL + RIVD G + DN ++TR
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVD-GLEGDNAHAPNAGSKVSTR 179
Query: 436 LLVPSSEIGCLEGRD-GSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
LLV +S+ G L G+ G++ ++ + +++L E++P D +V+++G+
Sbjct: 180 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHK 239
Query: 495 ALVEVTTRLRSYL 507
A+ + + LR +L
Sbjct: 240 AVELIASHLRKFL 252
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 43/241 (17%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S K P + +R+L K G +IG+ G IK I + T A I + + PG ER +
Sbjct: 74 SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
+S D +F PA + L +H RI++ G G+
Sbjct: 134 VSAKDEPD-----SAFPPAVDGLLRVHKRIVD-----GLEGDNAHA------------PN 171
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G++V+TR++V+ G L+GK G ++ ++ E+ +R+L + LP + +V+V
Sbjct: 172 AGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSE-DLPVFALQDDRVVEV 230
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP--HMNNTARRPSM 305
+GD V AV +I+S LR +F D +P MN P M
Sbjct: 231 LGDPAGVHKAVELIASHLR------------------KFLVDRSIIPVFEMNMQMSNPQM 272
Query: 306 D 306
D
Sbjct: 273 D 273
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 86/344 (25%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D++FR++ P ++G+VIG+ ++ ++ E +K+AD + +E++I ISS++ ++
Sbjct: 58 QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-EN 116
Query: 406 ELFPAQEALLHIQTRI------------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-S 452
+ A+ ALL + + I V +G N I RLL+ S+ GCL G G +
Sbjct: 117 VISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAI--RLLIAGSQAGCLIGMSGQN 174
Query: 453 LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
+ ++R S+GA I IL + ++P C S +D +VQI G++ A AL E+ +LR
Sbjct: 175 IEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLR------ 228
Query: 511 FFQKETPPSSTGPTGSALVVEAASPI-DITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
E PP V + SPI + R Q DP +A + ++ +
Sbjct: 229 ----ENPPRQ---------VISISPIYNPNTNRTSQQYLDPASADYVTLNM--------- 266
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
++P+ V LI + + ++R
Sbjct: 267 ---------------------------------------MIPETLVGGLIGRCGSNISRI 287
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + G+ E + IQ G+ +QV A+ + +I S
Sbjct: 288 RNESGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYS 331
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK GS I+ IR+ T A I + + I EER+I IS +D E
Sbjct: 62 FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS---KDSEN-- 116
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A+ AL + IL+ D + + G G V A R++++
Sbjct: 117 -VISDAENALLQVASLILKEDDS----NTDALKVGVGHVVAN----------AIRLLIAG 161
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
GCL+G G+ IE++R + I ILP++ LP C S S+ +VQ+ GD+ V A+
Sbjct: 162 SQAGCLIGMSGQNIEKLRNSSGATITILPQNQ-LPLCASAHDSDRMVQISGDVPAVLKAL 220
Query: 259 AIISSRLRESQHR 271
I +LRE+ R
Sbjct: 221 EEIGCQLRENPPR 233
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ D P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 109 VDDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV 168
Query: 396 TISSEEGPDDELFPAQEALLHIQTRIVD--------LGADKDNIITTRLLVPSSEIGCLE 447
IS+++ PD L PA + LL + RI D L NI TRLLVPSS+ G L
Sbjct: 169 MISAKDEPDAPLSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLI 228
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E VP D +V+I GE + A+ + + LR +
Sbjct: 229 GKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKF 286
Query: 507 L 507
L
Sbjct: 287 L 287
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 32/241 (13%)
Query: 30 NHYYQ-PNNNYRHRGNN--NNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCH 86
N Y + P N+Y+ N + + + +N+ +NN ++ K P + +RIL
Sbjct: 74 NQYNEDPTNSYQEELENAFSGDPDMAQKDNSQVNNVDDD-----KWPGWPGESVFRILVP 128
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
K G +IG+ G IK + + T A I + + PG ER + IS + +P+ + SPA
Sbjct: 129 AQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMIS--AKDEPDAPL---SPA 183
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
+ L +H RI +S G G R GN TR++V G L
Sbjct: 184 VDGLLRVHKRITDS----------------SNGESGQLQRSAGNIGPTRLLVPSSQAGSL 227
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
+GK G I+ ++ +K+ +RI+ ++P + +V++ G+ V+ AV +I+S LR
Sbjct: 228 IGKQGATIKSIQDSSKSVVRIV---ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLR 284
Query: 267 E 267
+
Sbjct: 285 K 285
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 86/344 (25%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D++FR++ P ++G+VIG+ ++ ++ E +K+AD + +E++I ISS++ ++
Sbjct: 58 QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-EN 116
Query: 406 ELFPAQEALLHIQTRI------------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-S 452
+ A+ ALL + + I V +G N I RLL+ S+ GCL G G +
Sbjct: 117 VISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAI--RLLIAGSQAGCLIGMSGQN 174
Query: 453 LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
+ ++R S+GA I IL + ++P C S +D +VQI G++ A AL E+ +LR
Sbjct: 175 IEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLR------ 228
Query: 511 FFQKETPPSSTGPTGSALVVEAASPI-DITPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
E PP V + SPI + R Q DP +A + ++ +
Sbjct: 229 ----ENPPRQ---------VISISPIYNPNTNRTSQQYLDPASADYVTLNM--------- 266
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
++P+ V LI + + ++R
Sbjct: 267 ---------------------------------------MIPETLVGGLIGRCGSNISRI 287
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + G+ E + IQ G+ +QV A+ + +I S
Sbjct: 288 RNESGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYS 331
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK GS I+ IR+ T A I + + I EER+I IS +D E
Sbjct: 62 FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS---KDSEN-- 116
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A+ AL + IL+ D + + G G V A R++++
Sbjct: 117 -VISDAENALLQVASLILKEDDS----NTDALKVGVGHVVAN----------AIRLLIAG 161
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
GCL+G G+ IE++R + I ILP++ LP C S S+ +VQ+ GD+ V A+
Sbjct: 162 SQAGCLIGMSGQNIEKLRNSSGATITILPQNQ-LPLCASAHDSDRMVQISGDVPAVLKAL 220
Query: 259 AIISSRLRESQHR 271
I +LRE+ R
Sbjct: 221 EEIGCQLRENPPR 233
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 44/263 (16%)
Query: 432 ITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ RLLVP+ IGCL GR GS+ ++MR+ T ANI ++S+ + P S +DELV++ GE
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEAD 59
Query: 491 AARDALVEVTTRLRSYLYRDFFQKE--------TPPSSTGPTGSALVVEAASPIDIT--- 539
RDALV++ RLR + ++ + + T +S GS+L + A P +
Sbjct: 60 KLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAP 119
Query: 540 --------PAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPT 591
P R ++ + + S+Q+ G S K E E VP
Sbjct: 120 LGYDRRGEPERALEVFPRTSSYGYSSMQVTDDGY-----GGLPSYASKAYE----EHVP- 169
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
LE+ +P + K++ K T L ++SGA + ++E + + I
Sbjct: 170 -------------RLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIA 216
Query: 652 QISGTPEQVERAQSVLQGFILST 674
ISGT EQ A+++++ FI+ST
Sbjct: 217 YISGTSEQRHSAENLIKAFIMST 239
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R++V +GCL+G+GG I+ MR +TK I I D PR S S+E+V+V G+ + +
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK--PRRASSSDELVEVSGEADKL 61
Query: 255 KNAVAIISSRLR--------ESQHRDRSHFHGRL--HSPDRFFPDDDYVPHMNNTARRPS 304
++A+ I RLR ESQ+ DR G+L + D + +P + ++ +
Sbjct: 62 RDALVQIILRLREAVLKESVESQNSDRD---GQLTVAASDSLYGSSLPLPALLPHNQQIA 118
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEA------GAAPMSDSVQPFYGEDL-VFRMLCPID 357
G G R+ PR S Y + G + Y E + M P
Sbjct: 119 PLGYDRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPAS 178
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ +V+G+ ++ ++ G +++ +P E I IS
Sbjct: 179 GISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYIS 219
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 162/355 (45%), Gaps = 80/355 (22%)
Query: 332 GAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
+AP + + G+D++FR++ P ++G+VIG+ ++ ++ + +K+AD + +
Sbjct: 86 ASAPEQSAAKRAKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHE 145
Query: 392 EQIITISSEEGPDDELFPAQEALLHIQTRIV---DLGADKDNII-------TTRLLVPSS 441
E++I ISS++ D+++ A++AL I I+ D D + T RLL+ S
Sbjct: 146 ERVIIISSKDN-DEKVTDAEKALEQIAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGS 204
Query: 442 EIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVE 498
+ G L G G ++ ++R S+GA+I +L+ ++P C S +D +VQ+ G++ A AL E
Sbjct: 205 QAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEE 264
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV 558
+ +LR E PP Q ++ P + ++
Sbjct: 265 IGCQLR----------ENPPR-------------------------QVISISPTYNYAAI 289
Query: 559 QIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKL 618
+ SQP + PT ++ V T E+++ + V L
Sbjct: 290 R---PSQPYLD--------------------PTSVDYV--------TFEMLISETMVGGL 318
Query: 619 ITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
I + + ++R SGA + + G+ E + IQ G+ +QV A+ + +I S
Sbjct: 319 IGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYS 373
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK G I+ IR+ T A I + + I EER+I IS +D + ++
Sbjct: 104 FRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISS---KDNDEKV 160
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ A++AL I IL +E++ V G N + R++++
Sbjct: 161 ---TDAEKALEQIAHLIL----------KEDDSSLDASKVTAGHV--AANTI--RLLIAG 203
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
G L+G G+ IE++R + I +L + LP C S S+ +VQ+ GD+ V A+
Sbjct: 204 SQAGGLIGMSGQNIEKLRDSSGASITVLAPNQ-LPLCASAHESDRVVQLSGDVPAVMKAL 262
Query: 259 AIISSRLRESQHR 271
I +LRE+ R
Sbjct: 263 EEIGCQLRENPPR 275
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 23/163 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---------- 397
+ FR+LC ++G VIG+S IV+ LQ++ G ++V D SD ++I +
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 398 ----SSEEGPDDELFPAQEALLHIQTRIVDLGADKD-----NIITTRLLVPSSEIGCLEG 448
SSEE E AQEA+L + RI+++ A D +++ RLL +S++G + G
Sbjct: 111 ALQGSSEE---VEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 449 RDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ G + E +RR +G+ I++L+ E++P C + TDE+V+ G ++
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLE 210
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 26/179 (14%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 134
+R+LCH + GGVIGKSG I+K ++ TGA I V + + R+I + S RR
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 135 DPEGRMPSF--SPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
+G S AQEA+ + +RILE GV GG V
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVA-------------AVVDGVPPGGV------V 151
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ R++ VG ++GKGGK++E++R E+ ++I++L + LP C + ++E+V+ G +
Sbjct: 152 SCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEK-LPTCAASTDEMVEHSGSL 209
>gi|413944061|gb|AFW76710.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 168
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 8/148 (5%)
Query: 485 IVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREV 544
IVGEI+AAR+AL++VTT+LRS+LYR E P G+ + A SP+ +P
Sbjct: 22 IVGEIKAARNALIQVTTKLRSFLYR-----EMPDPIQ--VGNINLHGAISPVAGSPRGPY 74
Query: 545 QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRS 604
Q P A HQ+ Q+ ATS SK++ GS S + +Q + + + R +PLVTRS
Sbjct: 75 QGNDIPMGAYHQASQL-ATSWHSKDSGGSASGSFEQGSNINDDIRQSATKRFAVPLVTRS 133
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEM 632
TLE+V+P+ AV L ++ + L + SE+
Sbjct: 134 TLEIVIPNSAVASLTMRAGSKLAQISEV 161
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 147/343 (42%), Gaps = 81/343 (23%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
+D++FR++ P ++G+VIG+ ++ ++ E +K+AD + +E++I ISS+E D
Sbjct: 68 AQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKES-D 126
Query: 405 DELFPAQEALLHIQTRIVD-----------LGADKDNIITTRLLVPSSEIGCLEGRDG-S 452
+ A+ AL I T I+ +GA T RLL+ S+ G L G G +
Sbjct: 127 CVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQN 186
Query: 453 LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
+ ++R S+GA I +L+ ++P C S +D +VQI G++ A+ E+ +LR
Sbjct: 187 IEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLR------ 240
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEA 570
E PP V+ + + R Q DP +A +
Sbjct: 241 ----ENPPKQ--------VISISPTYNYATVRPTQPYVDPTSADY--------------- 273
Query: 571 AGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFS 630
TLE+++ + V LI + + ++R
Sbjct: 274 ---------------------------------VTLEMMVSETLVGGLIGRCGSNISRIR 300
Query: 631 EMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + G+ E + IQ GT +QV A+ + +I S
Sbjct: 301 NESGAMIKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYS 343
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK G I+ IR+ T A I + + I EER+I IS ++ D
Sbjct: 73 FRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIIS-SKESD----- 126
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A+ AL I IL +E+E V G G G R++++
Sbjct: 127 CVVSDAENALKKIATLIL----------KEDESPAESSKVVGAGHLGANT---IRLLIAG 173
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
G L+G G+ IE++R + I +L + LP C S S+ +VQ+ GD+ V AV
Sbjct: 174 SQAGSLIGVSGQNIEKLRNSSGATITVLAPNQ-LPLCASAHESDRVVQISGDVPVVLKAV 232
Query: 259 AIISSRLRE 267
I +LRE
Sbjct: 233 EEIGCQLRE 241
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 324 PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
P IE +S+ P + + VFRML P KVG +IG ++ + E +K+
Sbjct: 61 PKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI--------ITTR 435
D G+ E+ + +S+++ PD PA + LL + RIVD G + DN ++TR
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVD-GLEGDNAHAPNAGSKVSTR 179
Query: 436 LLVPSSEIGCLEGRD-GSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
LLV +S+ G L G+ G++ ++ + +++L E++P D +V+++G+
Sbjct: 180 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHK 239
Query: 495 ALVEVTTRLRSYL 507
A+ + + LR +L
Sbjct: 240 AVELIASHLRKFL 252
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 43/241 (17%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
S K P + +R+L K G +IG+ G IK I + T A I + + PG ER +
Sbjct: 74 SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
+S + +P+ +F PA + L +H RI++ G +
Sbjct: 134 VS--AKDEPDS---AFPPAVDGLLRVHKRIVDGLEGDNAHAP-----------------N 171
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
G++V+TR++V+ G L+GK G ++ ++ E+ +R+L + LP + +V+V
Sbjct: 172 AGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSE-DLPVFALQDDRVVEV 230
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVP--HMNNTARRPSM 305
+GD V AV +I+S LR +F D +P MN P M
Sbjct: 231 LGDPAGVHKAVELIASHLR------------------KFLVDRSIIPVFEMNMQMSNPQM 272
Query: 306 D 306
D
Sbjct: 273 D 273
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFRM+ P+ KVG +IG +++ L E ++V D G+ E+++ +S +E
Sbjct: 41 PGWPGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKE 100
Query: 402 GPDDELFPAQEALLHIQTR---IVDLGADKDN-------IITTRLLVPSSEIGCLEGRDG 451
P +L PA +AL+ + R I D+ AD + RLLVP ++ L G+ G
Sbjct: 101 EPGLDLPPAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQG 160
Query: 452 -SLSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL- 507
S+ ++ TGA I+++S E P V+ + +V+I GE + AL V+ LR +L
Sbjct: 161 ASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLV 220
Query: 508 ---YRDFFQKETPPSS 520
F+K P S
Sbjct: 221 DHSVLPLFEKTNAPVS 236
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ K G +IG+ G +IK + + T A + V + G ER++ +S + +P
Sbjct: 47 SVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSG--KEEPGL 104
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R+ +G + + GV A R++V
Sbjct: 105 DLP---PAMDALIRVFKRV---NGITDVAADSTTQTAAPPGV-----------CAARLLV 147
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH-SLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D P V+ E IV++ G+ V A
Sbjct: 148 PGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKA 207
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 208 LQAVSNHLRK 217
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 30/350 (8%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSE 400
P + D VFRM+ P+ KVG +IG ++ + E +KV D PV+ D +I+ IS +
Sbjct: 68 PGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPD-RIVLISGK 126
Query: 401 EGPDDELFPAQEALLHIQTRIVDLGADKDN--------IITTRLLVPSSEIGCLEGRDGS 452
E P+ + PA +A+L + R+ L + D+ + RLLV S++ L G+ GS
Sbjct: 127 EEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGS 186
Query: 453 L-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD- 510
L + ++GA+++ILS EE P + + +V + GE AL + LR +L
Sbjct: 187 LIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLVDHT 246
Query: 511 ---FFQKETPPSSTGPTGSALVVEAASPID------ITPAREVQTVTDPPAATHQSVQIP 561
F+K+ + + E+ S + I P + D P + ++
Sbjct: 247 VVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRD-PLFLDRDARVE 305
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
+ QP+ + S + S + RV VT+ + + +P +I
Sbjct: 306 SRVQPTGVSIYSQDPVLSARHSPG-------LARVSSAFVTQVSQTMQIPFSYAEDIIGV 358
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ SGA++++ E P Q ++I GT QV+ A+ ++Q FI
Sbjct: 359 EGANIAYIRRRSGATITIKES-PHPDQITVEIKGTSSQVQTAEQLIQEFI 407
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 47 NNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQ 106
N +++ T+ ++N+ A + P +R++ K G +IG+ G IK + +
Sbjct: 44 NQPDSLAAAETTAPDTNDFAAE--RWPGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCE 101
Query: 107 HTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF 166
T A I V + +RI+ IS + +PE M SPA +A+ + R+ G
Sbjct: 102 ETRARIKVLDGPVNTPDRIVLISG--KEEPEAYM---SPAMDAVLRVFRRV------SGL 150
Query: 167 YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
++++ G + R++V+ L+GK G +I+ + + +R
Sbjct: 151 PDNDDDDVQNAGSA----------FCSVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 200
Query: 227 ILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
IL + + P + E IV + G+ + A+ I LR+
Sbjct: 201 ILSEEET-PFYAAQDERIVDLQGEALKILKALEAIVGHLRK 240
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D P + D VFR+L P KVG +IG ++ + + +K+ D G E+ + I
Sbjct: 104 DKRWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVII 163
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLEG 448
S+++ PD+ + PA + LL I RI D G+D + N+ TRLLVP+S+ G L G
Sbjct: 164 SAKDEPDEPISPAMDGLLRIHKRITD-GSDGEFGQPQRGASNVGPTRLLVPASQAGSLIG 222
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ G+ + ++ S+ + ++I+ E VP D +V+I GE A+ + LR +L
Sbjct: 223 KQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFL 280
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 139/351 (39%), Gaps = 50/351 (14%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
P + +RIL K G +IG+ G IK + + + A I + + PG ER + IS
Sbjct: 108 PGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKD 167
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
D SPA + L IH RI +DG G +G+ + RG N
Sbjct: 168 EPD-----EPISPAMDGLLRIHKRI--TDGSDGEFGQPQ--------------RGASNVG 206
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
TR++V G L+GK G I+ ++ +K+ +RI+ ++P + +V++ G+
Sbjct: 207 PTRLLVPASQAGSLIGKQGATIKSIQDSSKSVVRIV---ENVPPVALNDDRVVEIQGEPL 263
Query: 253 NVKNAVAIISSRLRE--SQHRDRSHFHG--RLHSPDRFFP---DDDYVPHMNNTARRPSM 305
V AV +I++ LR+ H F ++HS R P + P
Sbjct: 264 GVHKAVELIANHLRKFLVDHSVLPLFEQQMKMHSVQREQPMTAPQHWTPTQPWLPPPNLP 323
Query: 306 DGARFSGSNYR------SNNYGPRP-------------SGYSIEAGAAPMSDSVQPFYGE 346
G N + +NY PRP S Y EA + S + P +
Sbjct: 324 PVGPGYGGNPQFMPPRPQDNYYPRPDVPPMEKQPHYGISAYGREAPPSGTSGNQPPLHVA 383
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
V M P+ VIG + + ++ + G + + + E + I
Sbjct: 384 SQVHNMQIPLSYADAVIGAAGASISYIRRQSGAAVTIQESRGAPGEMTVEI 434
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+D P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 99 ADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVM 158
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLE 447
IS+++ PD + PA + L + RI D G+D D N+ TRLLVP+S+ G L
Sbjct: 159 ISAKDEPDAPISPAMDGLFRVYKRITD-GSDGDSGQPERNISNVGPTRLLVPASQAGSLI 217
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E +P D +V+I GE + AL + + LR +
Sbjct: 218 GKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 275
Query: 507 L 507
L
Sbjct: 276 L 276
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 28 RYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHD 87
+YN +P+N Y+ +N N ++ + ++ K P + +RIL
Sbjct: 68 QYNE--EPSNPYQEESDNAYNGEVKQQDSLPVE-------ADKKWPGWPGESVFRILIPA 118
Query: 88 MKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQ 147
K G +IG+ G IK + + + A I + + PG ER + IS + +P+ + SPA
Sbjct: 119 QKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMIS--AKDEPDAPI---SPAM 173
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
+ LF ++ RI +DG G G+ E R N TR++V G L+
Sbjct: 174 DGLFRVYKRI--TDGSDGDSGQPE--------------RNISNVGPTRLLVPASQAGSLI 217
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
GK G I+ ++ +K+ +RI+ +LP + +V++ G+ V+ A+ I+S LR+
Sbjct: 218 GKQGATIKSIQDSSKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRK 274
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P+ KVG +IG ++ + E +K+ D G E+ + +S++E
Sbjct: 120 PGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKE 179
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNI---------ITTRLLVPSSEIGCLEGRDGS 452
PD + PA + LL + +++++ D+D + + TRLLV ++ G L G+ GS
Sbjct: 180 EPDRPIPPAIDGLLRVHKQVINV--DRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGS 237
Query: 453 -LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ +G I++L E +P D +V+I GE A+ + LR +L
Sbjct: 238 TIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFL 293
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 26/225 (11%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIK 102
G+ + ++++ + I++ N P P V +R+L K G +IG+ G IK
Sbjct: 93 GDVPEDFDSLLKQESEIDSKGNEIKKWPGWPGENV---FRMLVPVQKVGSIIGRKGEFIK 149
Query: 103 SIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDG 162
I + T A I + + PG ER + +S + +P+ +P PA + L +H +++ D
Sbjct: 150 KITEETKARIKILDGPPGISERAVMVS--AKEEPDRPIP---PAIDGLLRVHKQVINVDR 204
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETK 222
G V TR++V+ G L+GK G I+ ++ +
Sbjct: 205 D-----------------LVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSG 247
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
IR+L + +LP + IV++ G+ V AV +I+ LR+
Sbjct: 248 CTIRVLGSE-NLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRK 291
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+D P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 97 ADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVM 156
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLE 447
IS+++ PD + PA + L + RI D G+D D N+ TRLLVP+S+ G L
Sbjct: 157 ISAKDEPDAPISPAMDGLFRVYKRITD-GSDGDSGQPERNISNVGPTRLLVPASQAGSLI 215
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E +P D +V+I GE + AL + + LR +
Sbjct: 216 GKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Query: 507 L 507
L
Sbjct: 274 L 274
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 28 RYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHD 87
+YN +P+N Y+ +N N ++ + ++ K P + +RIL
Sbjct: 66 QYNE--EPSNPYQEELDNAYNGEVKQQDSLPVE-------ADKKWPGWPGESVFRILIPA 116
Query: 88 MKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQ 147
K G +IG+ G IK + + + A I + + PG ER + IS + +P+ + SPA
Sbjct: 117 QKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMIS--AKDEPDAPI---SPAM 171
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
+ LF ++ RI +DG G G+ E R N TR++V G L+
Sbjct: 172 DGLFRVYKRI--TDGSDGDSGQPE--------------RNISNVGPTRLLVPASQAGSLI 215
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
GK G I+ ++ +K+ +RI+ +LP + +V++ G+ V+ A+ I+S LR+
Sbjct: 216 GKQGATIKSIQDSSKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRK 272
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+D P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 97 ADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVM 156
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLE 447
IS+++ PD + PA + L + RI D G+D D N+ TRLLVP+S+ G L
Sbjct: 157 ISAKDEPDAPISPAMDGLFRVYKRITD-GSDGDSGQPERNISNVGPTRLLVPASQAGSLI 215
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E +P D +V+I GE + AL + + LR +
Sbjct: 216 GKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Query: 507 L 507
L
Sbjct: 274 L 274
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 33/240 (13%)
Query: 28 RYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHD 87
+YN +P+N Y+ +N N ++ + ++ K P + +RIL
Sbjct: 66 QYNE--EPSNPYQEESDNAYNGEVKQQDSLPVE-------ADKKWPGWPGESVFRILIPA 116
Query: 88 MKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQ 147
K G +IG+ G IK + + + A I + + PG ER + IS + +P+ + SPA
Sbjct: 117 QKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMIS--AKDEPDAPI---SPAM 171
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
+ LF ++ RI +DG G G+ E R N TR++V G L+
Sbjct: 172 DGLFRVYKRI--TDGSDGDSGQPE--------------RNISNVGPTRLLVPASQAGSLI 215
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
GK G I+ ++ +K+ +RI+ +LP + +V++ G+ V+ A+ I+S LR+
Sbjct: 216 GKQGATIKSIQDSSKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRK 272
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 28/354 (7%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSE 400
P + D VFRM+ P+ KVG +IG ++ + E +KV D PV+ D +I+ IS +
Sbjct: 68 PGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPD-RIVLISGK 126
Query: 401 EGPDDELFPAQEALLHIQTRIVDLGADKDNII--------TTRLLVPSSEIGCLEGRDGS 452
E P+ + PA +A+L + R+ L + D+ + + RLLV S++ L G+ GS
Sbjct: 127 EEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGS 186
Query: 453 L-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD- 510
L + ++GA+++ILS EE P + + +V + GE AL + LR +L
Sbjct: 187 LIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHT 246
Query: 511 ---FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQ-----TVTDPPAATHQSVQIPA 562
F+K+ + + E+ S + + ++ P + ++ +
Sbjct: 247 VVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDS 306
Query: 563 TSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKS 622
QPS + S + S + RV VT+ + + +P +I
Sbjct: 307 RVQPSGVSIYSQDPVLSARHSPG-------LARVSSAFVTQVSQTMQIPFSYAEDIIGVE 359
Query: 623 KTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
+ SGA++++ E P Q ++I GT QV+ A+ ++Q FI++ ++
Sbjct: 360 GANIAYIRRRSGATITIKES-PHPDQITVEIKGTTSQVQTAEQLIQEFIINHKE 412
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 47 NNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQ 106
N +++ T+ ++N+ A + P +R++ K G +IG+ G IK + +
Sbjct: 44 NQPDSLAAAETTFPDTNDSAEE--RWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCE 101
Query: 107 HTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF 166
T A I V + +RI+ IS + +PE M SPA +A+ + R+ G
Sbjct: 102 ETRARIKVLDGPVNTPDRIVLISG--KEEPEAYM---SPAMDAVLRVFRRV------SGL 150
Query: 167 YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
++++ G V + R++V+ L+GK G +I+ + + +R
Sbjct: 151 PDNDDDDVQNAGSVFS----------SVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 200
Query: 227 ILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
IL + + P + E IV + G+ + A+ I LR
Sbjct: 201 ILSEEET-PFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 44/357 (12%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ + +E ++V D G+ ++++ IS +E
Sbjct: 55 PGWPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKE 114
Query: 402 GPDDELFPAQEALLHIQTRIV--------DLGADKDNIITTRLLVPSSEIGCLEGRDGSL 453
+ L PA +A++ + R+ +LGA + RLLV S++ L G+ GS+
Sbjct: 115 DVEAPLSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSI 174
Query: 454 -SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
++ STGA++++LS EVP V+ + +V + GE +AL + L R F
Sbjct: 175 IKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHL-----RKFL 229
Query: 513 QKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
+ +AL I+ R+ +T +D ++ H + Q +G
Sbjct: 230 VDHSVLPLFEKNYNAL---------ISLDRQAETWSDR-SSFHTTSQ--GRIDIDYPLSG 277
Query: 573 SVSETVKQNESERREDVP------------------TVINRVPLPLVTRSTLEVVLPDYA 614
+ + E+ VP +V NR +P+VT+ T + +P
Sbjct: 278 KRDALLLERETPFESQVPLSRISLYGQDPAISSVRSSVFNRSSVPIVTQVTQTMQVPISY 337
Query: 615 VPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
++I + SGA +++ E + + I++I GT +V+ AQ ++Q F+
Sbjct: 338 AEEIIGIRGNNIEYIRRTSGAIITVNESRGLPDEIIVEIKGTASEVQMAQQLIQEFL 394
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI 118
+ N A+++ P +R++ +K G +IG+ G +IK + T A I V +
Sbjct: 41 VENPEPSASTSANWPGWPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAP 100
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
G +R++ IS + D E + SPA +A+ + R+ G +E G G
Sbjct: 101 IGTPDRVVLISG--KEDVEAPL---SPAMDAVIRVFKRV------SGLPEGNAQELGAAG 149
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
+ R++V+ L+GK G II+ ++ T +R+L ++ +P V
Sbjct: 150 IAFS----------SIRLLVASTQAINLIGKQGSIIKSIQESTGASVRVL-SENEVPFYV 198
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ E IV + G+ V A+ I LR+
Sbjct: 199 ATDERIVDLQGEAMKVLEALEAIVGHLRK 227
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 37/358 (10%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +V+ + +E +++ + G ++I+ IS +E
Sbjct: 47 PGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKE 106
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-ADKDN-------------IITTRLLVPSSEIGCLE 447
P+ L PA +A+L + R+ L + DN + RLLV SS+ L
Sbjct: 107 EPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLI 166
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ GS + ++ +TG +++++ +++P + + +V+I GE AL V LR +
Sbjct: 167 GKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKF 226
Query: 507 LYRD----FFQKETPPSSTGPTGSALVVEAASP-IDITPAREVQTVT--------DPPAA 553
L F+K + + + + A P + PA ++ DP
Sbjct: 227 LVDHSVIPIFEKTYNATISLERPADACADNAQPSLHSAPAFSSGIISDYSLSLKRDPSIY 286
Query: 554 THQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDY 613
H++ SQP G ++ T + R P+VT+ T + +P
Sbjct: 287 EHETHFEHKISQPGFSLYGDPGLVGLRS---------TGLGRATAPIVTQVTQTMQVPLS 337
Query: 614 AVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+I + + + SGA +S+ E + + ++I GT QV+ AQ ++Q FI
Sbjct: 338 YAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQEFI 395
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K G +IG+ G ++K + T A I + E G +RI+ IS + +PE +
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISG--KEEPEAPL 112
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
SPA +A+ + R+ G GE G G G + R++V+
Sbjct: 113 ---SPAMDAVLRVFKRV-----SGLSPGE-----GDNTGSAAAAAAAGSAFCSIRLLVAS 159
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G II+ ++ T +R++ D +P + E IV++ G+ V A+
Sbjct: 160 SQAINLIGKQGSIIKSIQENTGVVVRVMAED-DIPTYATSDERIVEIHGEAMKVFKALEA 218
Query: 261 ISSRLRE 267
+ LR+
Sbjct: 219 VIGHLRK 225
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 38/359 (10%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +V+ + +E +++ + G ++I+ IS +E
Sbjct: 5 PGWPGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKE 64
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-ADKDN-----------IITTRLLVPSSEIGCLEGR 449
P+ PA +A++ + R+ L + DN + RLLV SS+ L G+
Sbjct: 65 EPEAPQSPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGK 124
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL- 507
GS + ++ +TGA + +++ +E+P+ + + +V+I GE AL V +LR +L
Sbjct: 125 QGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLV 184
Query: 508 -----------YRDFFQKETP----PSSTGPTGSALVVEAASPIDITPAREVQTVTDPPA 552
Y +E P P P+ + V P I + DP
Sbjct: 185 DHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAYVPTI-PSGIASDYSLSFKRDPSI 243
Query: 553 ATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPD 612
H++ SQP G V T + R P+VT+ T + +P
Sbjct: 244 YEHETQFEHKISQPGLSIYGQDPGIVGFRS--------TGLGRAAAPIVTQVTQTMQVPL 295
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+I + + + S A +S+ E + + ++I GT QV+ AQ ++Q FI
Sbjct: 296 SYAEDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFI 354
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+R++ K G +IG+ G ++K + T A I + E G +RI+ IS + +PE
Sbjct: 12 VFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISG--KEEPEAP 69
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
SPA +A+ + R+ G GE G G G + R++V+
Sbjct: 70 Q---SPAMDAVMRVFKRV-----SGLSPGE-------GDNTGSAAAAAGSAFCSIRLLVA 114
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
L+GK G II+ ++ T + ++ D LP + E IV++ G+ V A+
Sbjct: 115 SSQAINLIGKQGSIIKSIQENTGAAVHVMAEDE-LPSYATSDERIVEIHGEAMKVFKALE 173
Query: 260 IISSRLRE 267
+ +LR+
Sbjct: 174 AVIGQLRK 181
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P+ KVG +IG ++ + E +K+ D G E+ + +S++E
Sbjct: 119 PGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKE 178
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDN-------IITTRLLVPSSEIGCLEGRDGS-L 453
PD + PA + LL + +++++ D + + TRLLV ++ G L G+ GS +
Sbjct: 179 EPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTI 238
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ +G I++L E +P D +V+I GE A+ + LR +L
Sbjct: 239 KSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFL 292
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE 122
+++ N K P +R+L K G +IG+ G IK I + T A I + + PG
Sbjct: 109 DSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGIS 168
Query: 123 ERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
ER + +S + +P+ +P PA + L +H +++ D
Sbjct: 169 ERAVMVS--AKEEPDCPIP---PAVDGLLRVHKQVINVDRD-----------------LA 206
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
G V TR++V+ G L+GK G I+ ++ + IR+L + +LP +
Sbjct: 207 DSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSE-NLPIFALRDD 265
Query: 243 EIVQVVGDINNVKNAVAIISSRLRE 267
IV++ G+ V AV +I+ LR+
Sbjct: 266 SIVEIQGESAGVHKAVELIAVHLRK 290
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+D P + + VFR+L P KVG +IG ++ + E +K+ D G E+ +
Sbjct: 97 ADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVM 156
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD---------NIITTRLLVPSSEIGCLE 447
IS+++ PD + PA + L + RI D G+D D N+ TRLLVP+S+ G L
Sbjct: 157 ISAKDEPDAPISPAMDGLFRVYKRITD-GSDGDSGQPERNISNVGPTRLLVPASQAGSLI 215
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
G+ G+ + ++ S+ + ++I+ E +P D +V+I GE + AL + + LR +
Sbjct: 216 GKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKF 273
Query: 507 L 507
L
Sbjct: 274 L 274
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 26 KPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILC 85
+P + +P+N Y+ +N N ++ + ++ K P + +RIL
Sbjct: 62 EPENQYNEEPSNPYQEESDNAYNGEVKQQDSLPVE-------ADKKWPGWPGESVFRILI 114
Query: 86 HDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSP 145
K G +IG+ G IK + + + A I + + PG ER + IS + +P+ SP
Sbjct: 115 PAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMIS--AKDEPDA---PISP 169
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
A + LF ++ RI +DG G G+ E R N TR++V G
Sbjct: 170 AMDGLFRVYKRI--TDGSDGDSGQPE--------------RNISNVGPTRLLVPASQAGS 213
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
L+GK G I+ ++ +K+ +RI+ +LP + +V++ G+ V+ A+ I+S L
Sbjct: 214 LIGKQGATIKSIQDSSKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Query: 266 RE 267
R+
Sbjct: 271 RK 272
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 103/183 (56%), Gaps = 19/183 (10%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D++FR++ P ++G+VIG+ ++ ++ E +K+AD + +E++I ISS++ ++
Sbjct: 58 QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-EN 116
Query: 406 ELFPAQEALLHIQTRI------------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-S 452
+ A+ ALL + I V +G N I RLL+ S+ GCL G G +
Sbjct: 117 VISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAI--RLLIAGSQAGCLIGMSGQN 174
Query: 453 LSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSY-LYR 509
+ ++R S+GA I IL + ++P C S +D +VQI G++ A AL E+ +LR+ L
Sbjct: 175 IEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRTTNLAA 234
Query: 510 DFF 512
D+
Sbjct: 235 DYV 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK GS I+ IR+ T A I + + I EER+I IS +D E
Sbjct: 62 FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS---KDSEN-- 116
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A+ AL IL+ D + + G G V A R++++
Sbjct: 117 -VISDAENALLQXASLILKEDDS----NTDALKVGVGHVVAN----------AIRLLIAG 161
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
GCL+G G+ IE++R + I ILP++ LP C S S+ +VQ+ GD+ V A+
Sbjct: 162 SQAGCLIGMSGQNIEKLRNSSGATITILPQNQ-LPLCASAHDSDRMVQISGDVPAVLKAL 220
Query: 259 AIISSRLR 266
I +LR
Sbjct: 221 EEIGCQLR 228
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 164/366 (44%), Gaps = 51/366 (13%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D V+R++ P+ KVG +IG +++ + E +++ D ++I+ IS +E
Sbjct: 21 PGWPGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKE 80
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNII----------TTRLLVPSSEIGCLEGRDG 451
P+ L PA +A+L + R+ L A + + + + +LLV SS+ L G+ G
Sbjct: 81 EPEAALSPAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQG 140
Query: 452 S-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
S + ++ ST A +++L+ EE P+ + + +V+I GE AL V +LR +L
Sbjct: 141 STIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFLVDH 200
Query: 511 ----FFQK-----------------ETPPSSTGPTGSALVVEAASPIDITPAREVQTVTD 549
F+K +T PS P+ +AL A + I + D
Sbjct: 201 TVVPIFEKTHNAIISQDRSADARADKTQPSI--PSLTALHSAPAPQVGIGSEYSLSLKRD 258
Query: 550 PPA---ATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTL 606
P +H +IP + + +S PT + R P+VT+ T
Sbjct: 259 PSIYDRESHLDQKIPQSGL-----------LLFGQDSSLGGLRPTGLGRAAAPIVTQMTQ 307
Query: 607 EVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ-PEGTQKIIQISGTPEQVERAQS 665
+ +P +I + + SGA +++ E + P+ + ++I GT QV+ AQ
Sbjct: 308 TMQVPLSYAEDIIGVGGSNIAYIRRTSGAILTIQESRTPD--EITVEIKGTASQVQMAQQ 365
Query: 666 VLQGFI 671
++Q FI
Sbjct: 366 LIQEFI 371
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR++ K G +IG+ G +IK + T A I + + P +RI+ IS + +PE
Sbjct: 29 YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISG--KEEPEA-- 84
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA +A+ + R+ G E + G V G F + +++V+
Sbjct: 85 -ALSPAMDAVLRVFKRV------SGLSAGEADAM--GSAVAGAAFS------SVKLLVAS 129
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G I+ ++ T +R+L + + P + E IV++ G+ + V A+
Sbjct: 130 SQAINLIGKQGSTIKSIQESTAATVRVLAEEEA-PSYATSDERIVEIHGEASKVLKALEG 188
Query: 261 ISSRLRE 267
+ +LR+
Sbjct: 189 VIGQLRK 195
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFRML P+ KVG +IG ++ L E +K+ D G+ E+ + +S++E
Sbjct: 34 PGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKE 93
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDN----IITTRLLVPSSEIGCLEGRDG-SLSEM 456
PD + PA + LL + I+D+ +D + +++TRLLV +++ G L G+ G ++ +
Sbjct: 94 EPDAPIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSI 153
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ +++L E +P D +V+I GE + A+ + + LR +L
Sbjct: 154 QEASNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFL 203
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE 122
N+ + K P +R+L K G +IG+ G IK + + T A I + + PG
Sbjct: 24 NDGSGGGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTS 83
Query: 123 ERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
ER + +S + +P+ + +PA + L +H I++ E + GV
Sbjct: 84 ERAVMVS--AKEEPDAPI---APAIDGLLRVHKCIMDV----------ESDVPSAAGV-- 126
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
V+TR++V G L+GK G I+ ++ + +R+L +LP ++
Sbjct: 127 --------MVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVL--GENLPLFALQND 176
Query: 243 EIVQVVGDINNVKNAVAIISSRLRE 267
+V++ G+ +V AV +I+S LR+
Sbjct: 177 TVVEIQGEPASVHKAVELIASNLRK 201
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 67/343 (19%)
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE-EGPDDELFPAQEALLH 416
K+G+VIG+ ++ L++E G +K+ADP++ ++++ + ISS+ EG D A+ ALL
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTC-AELALLE 571
Query: 417 IQTRIVD--LGADKDNII---------TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANI 464
+ T ++ GA I TRLL+ S+ G L G+ G+ + +R S+ A++
Sbjct: 572 VVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASV 631
Query: 465 QILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
++L +++P C + TD LVQI GE+ A + A+ V LR + PP T
Sbjct: 632 RVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLR----------DNPPKETV 681
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATS-----------------Q 565
PT TP + T Q V +P +S Q
Sbjct: 682 PT--------------TPEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQ 727
Query: 566 PSKEAAGSVSETVKQNESERREDVPTVIN---RVPLPLVTRSTLEVVLPDYAVPKLITKS 622
P A + + V P N R+P P++ + + E+ +P + LI K
Sbjct: 728 PHPLAGPAYAGGVLAQAP------PLYANPAARLP-PMLPKVSAEMSVPSSVMGGLIGKG 780
Query: 623 KTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQS 665
++ +SGA++ + + ++ I GT EQ R +S
Sbjct: 781 GFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQCFRKKS 823
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
+ K G VIGK GS IK +R TGA I + + + E+R + IS EG S
Sbjct: 511 EWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKN----EGG--SDRTC 564
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
E L IL DG G G +G N TR++++ G L
Sbjct: 565 AELALLEVVTILLKDGDG----------ATPSAAIGPQHQGSPN--LTRLLIAGSQAGSL 612
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE--EIVQVVGDINNVKNAVAIISSR 264
+GK G I+ +R + +R+LP D LP C + E +VQ+ G++ V+ A+ ++++
Sbjct: 613 IGKAGANIKNIRGSSSASVRVLPSDQ-LPLCSAACETDRLVQISGEVAAVQMAIELVAAN 671
Query: 265 LRE 267
LR+
Sbjct: 672 LRD 674
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 60 NNSNNRAN-SNPKDPSLMVTT---TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH 115
N S+ RA S P L + +R+LC+ + GGVIGKSG++IK+++ TGA I +
Sbjct: 25 NGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIE 84
Query: 116 ELIPGDEERIIEISD---------TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF 166
+ +R+I + R +G S AQEAL + DRILE
Sbjct: 85 DSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILE------- 137
Query: 167 YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
E E G G V+ R+V G ++GKGGK++E+++ +T +I
Sbjct: 138 VAAEME-----------GIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIW 186
Query: 227 ILPRDHSLPRCVSMSEEIVQV 247
+ +LP C+S +E+++
Sbjct: 187 VC--KDNLPACISSPDEVIEC 205
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 322 PRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDL 381
P P+G S A + P + FR+LC ++G VIG+S +++ LQ G +
Sbjct: 22 PFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKI 81
Query: 382 KVADPVDGSDEQIITI--------------SSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
++ D + S +++I + S +G E+ AQEALL + RI+++ A+
Sbjct: 82 RIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAE 141
Query: 428 KDNI------ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTD 480
+ I ++ RL+ S++ G + G+ G + E +++ TG I + ++ +PAC+S D
Sbjct: 142 MEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPD 200
Query: 481 ELVQIVGEIQAARDALVEVTTRL 503
E++ E A+R TR+
Sbjct: 201 EVI----ECSASRSMFGSAVTRI 219
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
GE+ VFRML P+ KVG +IG ++ L E +K+ D G+ E+ + +S++E PD
Sbjct: 38 GEN-VFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPD 96
Query: 405 DELFPAQEALLHIQTRIVDLGADKDN----IITTRLLVPSSEIGCLEGRDG-SLSEMRRS 459
+ PA + LL + I+D+ +D + +++TRLLV +++ G L G+ G ++ ++ +
Sbjct: 97 APIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEA 156
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ +++L E +P D +V+I GE + A+ + + LR +L
Sbjct: 157 SNCIVRVLG-ENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFL 203
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE 122
NN + K P +R+L K G +IG+ G IK + + T A I + + PG
Sbjct: 24 NNGSGGGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTS 83
Query: 123 ERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGG 182
ER + +S + +P+ + +PA + L +H I++ E + GV
Sbjct: 84 ERAVMVS--AKEEPDAPI---APAIDGLLRVHKCIMDV----------ESDVPSAAGV-- 126
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
V+TR++V G L+GK G I+ ++ + +R+L + LP ++
Sbjct: 127 --------MVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVLGEN--LPLFALQND 176
Query: 243 EIVQVVGDINNVKNAVAIISSRLRE 267
+V++ G+ +V AV +I+S LR+
Sbjct: 177 TVVEIQGEPASVHKAVELIASNLRK 201
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 159 ESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMR 218
E D GG + E++ G G GG + G RM++ VG ++G+ G+ I+++
Sbjct: 8 ELDEGGNCHPPEKQGLNNGSG-GGEKWPGWPGENVFRMLIPVQKVGYIIGRKGEHIKKLS 66
Query: 219 METKTQIRIL 228
ETK +I+IL
Sbjct: 67 EETKARIKIL 76
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L E +++ + G+ E+I+ +S +E
Sbjct: 40 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE 99
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
PD EL PA +AL+ + R+ + A ++ RLLVP ++ L G+ G+
Sbjct: 100 DPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGA 159
Query: 453 -LSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ ST A I+++S E P V+ + +V+I G+ + AL V+ LR +L
Sbjct: 160 TIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFL 217
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP+
Sbjct: 46 SVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG--KEDPDL 103
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R+ G G + A R++V
Sbjct: 104 ELP---PAMDALMRVFKRVTGITDGAA---------------EGTQAAATPDVCAARLLV 145
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD-HSLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D H P V+ E IV++ GD V A
Sbjct: 146 PGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 206 LQAVSNHLRK 215
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 16/195 (8%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFRM+ P+ KVG +IG +++ L E ++V + G+ E+I+ +S++E
Sbjct: 45 PGWPGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKE 104
Query: 402 GPDDELFPAQEALLHIQTRI--VDLGADKDN-------IITTRLLVPSSEIGCLEGRDG- 451
P EL PA +AL+ + R+ + GA + + RL+VP ++ L G+ G
Sbjct: 105 DPGLELPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGA 164
Query: 452 SLSEMRRSTGANIQILSREE--VPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYR 509
S+ ++ TGA I+++S +E P V+ + +V+I GE + AL V+ LR +L
Sbjct: 165 SIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVD 224
Query: 510 D----FFQKETPPSS 520
F+K P S
Sbjct: 225 HSVLPLFEKTNAPVS 239
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+R++ +K G +IG+ G +IK + + T A + V E G ERI+ +S + DP
Sbjct: 52 VFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVS--AKEDPGLE 109
Query: 140 MPSFSPAQEALFLIHDRILE-SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R+ SDG E + GV A R+VV
Sbjct: 110 LP---PAMDALIRVFKRVNGISDGAA-----EGTQTSAAPGV-----------CAARLVV 150
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH-SLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D P V+ E IV++ G+ V A
Sbjct: 151 PGAQAINLIGKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKA 210
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 211 LQAVSNHLRK 220
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L E +++ + G+ E+I+ +S +E
Sbjct: 40 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE 99
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
PD EL PA +AL+ + R+ + A ++ RLLVP ++ L G+ G+
Sbjct: 100 DPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGA 159
Query: 453 -LSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ ST A I+++S E P V+ + +V+I G+ + AL V+ LR +L
Sbjct: 160 TIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFL 217
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP+
Sbjct: 46 SVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG--KEDPDL 103
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R+ G G + A R++V
Sbjct: 104 ELP---PAMDALMRVFKRVTGITDGAA---------------EGTQAAATPDVCAARLLV 145
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD-HSLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D H P V+ E IV++ GD V A
Sbjct: 146 PGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 206 LQAVSNHLRK 215
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L E +++ + G+ E+I+ +S +E
Sbjct: 44 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE 103
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
P EL PA +AL+ + R++ + A + RLLVP ++ L G+ G+
Sbjct: 104 DPGLELPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGA 163
Query: 453 -LSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ STGA I+++S E P V+ + +++I G+ + AL V+ LR +L
Sbjct: 164 TIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFL 221
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP
Sbjct: 50 SVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG--KEDPGL 107
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R++ G E + GV A R++V
Sbjct: 108 ELP---PAMDALMRVFKRVIGITDGAA----EGTQAAATPGV-----------CAARLLV 149
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH-SLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D P V+ E I+++ GD V A
Sbjct: 150 PGAQAINLIGKQGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKA 209
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 210 LQAVSNHLRK 219
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D P + + VFR+L P KVG VIG ++ + E +KV + E+ + I
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD-LGADKD-------NIITTRLLVPSSEIGCLEGR 449
S+++ PD EL PA + LL + RI D L + D N TRLLVP+S+ G L G+
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G+ + ++ ++ ++I+ E VP D +V+I GE + A+ + + LR +L
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL 273
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +RIL K G VIG+ G IK + + + A I V E P ER + IS
Sbjct: 99 KWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMIS- 157
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H RI + G E ++ R N
Sbjct: 158 -AKDEPDTELP---PAVDGLLRVHRRITD-----GLETETDQPQ-----------RATVN 197
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RI+ ++P + +V++ G+
Sbjct: 198 TGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV---ENVPPVALNDDRVVEIQGE 254
Query: 251 INNVKNAVAIISSRLRE 267
++ AV +I+S LR+
Sbjct: 255 PHDSHKAVELIASHLRK 271
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D P + + VFR+L P KVG VIG ++ + E +KV + E+ + I
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD-LGADKD-------NIITTRLLVPSSEIGCLEGR 449
S+++ PD EL PA + LL + RI D L + D N TRLLVP+S+ G L G+
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G+ + ++ ++ ++I+ E VP D +V+I GE + A+ + + LR +L
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL 273
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +RIL K G VIG+ G IK + + + A I V E P ER + IS
Sbjct: 99 KWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMIS- 157
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H RI + G E ++ R N
Sbjct: 158 -AKDEPDTELP---PAVDGLLRVHRRITD-----GLETETDQPQ-----------RATVN 197
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RI+ ++P + +V++ G+
Sbjct: 198 TGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV---ENVPPVALNDDRVVEIQGE 254
Query: 251 INNVKNAVAIISSRLRE 267
++ AV +I+S LR+
Sbjct: 255 PHDSHKAVELIASHLRK 271
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + VFR++ P+ KVG +IG +++ E ++V D G+ ++I+ IS +E
Sbjct: 40 PGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKE 99
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-ADKDN------IITTRLLVPSSEIGCLEGRDGSL- 453
P+ L PA A++ + R+ D +N + RLLV S++ L G+ GSL
Sbjct: 100 EPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLI 159
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ +TGA++++LS +EVP + + +V++ GE AL V LR +L
Sbjct: 160 KSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFL 213
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ +K G +IG+ G +IK + T A I V + G +RI+ IS + +PE +
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISG--KEEPEAPL 105
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
SPA A+ + R+ GF + E + R++V+
Sbjct: 106 ---SPAMNAVIRVFKRV------SGFSEIDAENKASAVAF-----------CSVRLLVAS 145
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G +I+ ++ T +R+L D +P + E IV++ G+ V A+
Sbjct: 146 TQAINLIGKQGSLIKSIQENTGASVRVLSGDE-VPFYAAADERIVELQGEAMKVLKALEA 204
Query: 261 ISSRLRE 267
+ LR+
Sbjct: 205 VVGHLRK 211
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D P + + VFR+L P KVG VIG ++ + E +KV + E+ + I
Sbjct: 97 DKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI 156
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD-LGADKD-------NIITTRLLVPSSEIGCLEGR 449
S+++ PD EL PA + LL + RI D L + D N TRLLVP+S+ G L G+
Sbjct: 157 SAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGK 216
Query: 450 DG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G ++ ++ ++ ++I+ E VP D +V+I GE + A+ + + LR +L
Sbjct: 217 QGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL 273
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +RIL K G VIG+ G IK + + + A I V E P ER + IS
Sbjct: 99 KWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMIS- 157
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H RI + G E ++ R N
Sbjct: 158 -AKDEPDTELP---PAVDGLLRVHRRITD-----GLETETDQPQ-----------RATVN 197
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RI+ ++P + +V++ G+
Sbjct: 198 TGPTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV---ENVPPVALNDDRVVEIQGE 254
Query: 251 INNVKNAVAIISSRLRE 267
++ AV +I+S LR+
Sbjct: 255 PHDSHKAVELIASHLRK 271
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D++FR++ P ++G+VIG+ ++ ++ E +K+AD V +E++I ISS++ +
Sbjct: 66 AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-E 124
Query: 405 DELFPAQEALLHIQTRI----------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-SL 453
+ + A++AL I I + +G T RLL+ S+ G L G G ++
Sbjct: 125 NSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNI 184
Query: 454 SEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLR 504
++R S+GA+I IL+ ++P C S +D +VQI G+I A AL E+ +LR
Sbjct: 185 EKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 28/236 (11%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI 118
++NS+ S PK + +RI+ + G VIGK G I+ +R+ T A I + + +
Sbjct: 49 VSNSDASDISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAV 108
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
EER+I IS +D E S + A++AL I IL+ DG EE G G
Sbjct: 109 ARYEERVIIISS---KDNEN---SVTDAEKALQQIAALILKEDGSS-----IEELKVGTG 157
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
V R++++ G L+G G+ IE++R + I IL + LP C
Sbjct: 158 HVAANTI---------RLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQ-LPLCA 207
Query: 239 SM--SEEIVQVVGDINNVKNAVAIISSRLRESQHRDR-----SHFHGRLHSPDRFF 287
S S+ +VQ+ GDI V A+ I ++LR + R ++ + +H P +
Sbjct: 208 SAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYM 263
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D P + + VFR+L P+ KVG VIG ++ + E +K+ D G E+ + I
Sbjct: 116 DKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMI 175
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD-LGADKDN-------IITTRLLVPSSEIGCLEGR 449
S+++ PD + PA + LL + RI D L ++ D + TRLLVP+S+ G L G+
Sbjct: 176 SAKDEPDALVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGK 235
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G+ + ++ ++ ++IL E VP D +V+I GE A+ + + LR +L
Sbjct: 236 QGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKFL 292
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
N + K P + +R+L K G VIG+ G IK + + + A I + + PG E
Sbjct: 111 NVETEDKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPE 170
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
R + IS + +P+ + SPA + L +H RI + G E ++ G G VG
Sbjct: 171 RAVMIS--AKDEPDALV---SPAVDGLLRVHKRITD-----GLDSETDQPQRGAGPVG-- 218
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
TR++V G L+GK G I+ ++ +K +RIL ++P +
Sbjct: 219 ---------PTRLLVPASQAGSLIGKQGATIKSIQDASKCALRIL---ENVPPVALNDDR 266
Query: 244 IVQVVGDINNVKNAVAIISSRLRE 267
+V++ G+ +V AV +I+S LR+
Sbjct: 267 VVEIQGEPLDVHKAVELIASHLRK 290
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D++FR++ P ++G+VIG+ ++ ++ E +K+AD V +E++I ISS++ ++
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENS 126
Query: 407 LFPAQEALLHIQTRI----------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSE 455
+ A++AL I I + +G T RLL+ S+ G L G G ++ +
Sbjct: 127 VTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEK 186
Query: 456 MRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLR 504
+R S+GA+I IL+ ++P C S +D +VQI G+I A AL E+ +LR
Sbjct: 187 LRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI 118
++NS+ S PK + +RI+ + G VIGK G I+ +R+ T A I + + +
Sbjct: 49 VSNSDASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAV 108
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
EER+I IS +D E S + A++AL I IL+ DG EE G G
Sbjct: 109 ARYEERVIIISS---KDNEN---SVTDAEKALQQIAALILKEDGSS-----IEELKVGTG 157
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
V R++++ G L+G G+ IE++R + I IL + LP C
Sbjct: 158 HVAANTI---------RLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQ-LPLCA 207
Query: 239 SM--SEEIVQVVGDINNVKNAVAIISSRLRES 268
S S+ +VQ+ GDI V A+ I ++LR++
Sbjct: 208 SAHESDRVVQISGDILAVLKALEEIGNQLRKT 239
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 39/323 (12%)
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE-EGPDDELFPAQEALLH 416
K+G+VIG+ ++ L++E G +K+ADP++ ++++ + ISS+ EG D A+ ALL
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSC-AELALLE 570
Query: 417 IQTRIVD--LGADKDNII---------TTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANI 464
+ T ++ GA I TRLL+ S+ G L G+ G+ + +R S+ A++
Sbjct: 571 VVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASV 630
Query: 465 QILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
++L +++P C + TD LVQI GE+ A + A+ V LR + PP T
Sbjct: 631 RVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLR----------DNPPKETV 680
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATH---QSVQIPATSQPSKEAAGSVSETVK 579
PT ID ++V AA + S QP A + + V
Sbjct: 681 PTNPEAKTAYFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVL 740
Query: 580 QNESERREDVPTVIN---RVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGAS 636
P N R+P P++ + + E+ +P + LI K ++ +SGA+
Sbjct: 741 AQAP------PLYANPAARLP-PMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGAT 793
Query: 637 VSLVEGQPEGTQKIIQISGTPEQ 659
+ + + ++ I GT EQ
Sbjct: 794 IKVNGSKESSVERTILFEGTQEQ 816
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
+ K G VIGK GS IK +R TGA I + + + E+R + IS EG + S A
Sbjct: 510 EWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKN----EG-VSDRSCA 564
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
+ AL + IL DG G G +G N TR++++ G L
Sbjct: 565 ELALLEVVT-ILLKDGDG----------ATPSAAIGPQHQGSPN--LTRLLIAGSQAGSL 611
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE--EIVQVVGDINNVKNAVAIISSR 264
+GK G I+ +R + +R+LP D LP C + E +VQ+ G++ V+ A+ ++++
Sbjct: 612 IGKAGANIKNIRGSSSASVRVLPSDQ-LPLCSAACETDRLVQISGEVAAVQMAIELVAAN 670
Query: 265 LRE 267
LR+
Sbjct: 671 LRD 673
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L E ++V + G+ E+I+ +S +E
Sbjct: 50 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKE 109
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDG- 451
P EL PA +AL+ + R+ + A + RLLVP ++ L G+ G
Sbjct: 110 DPALELPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGA 169
Query: 452 SLSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
S+ ++ TGA I+++S E P V + +V+I GE + AL V+ LR +L
Sbjct: 170 SIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFL 227
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + V E G ERI+ +S + DP
Sbjct: 56 SVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSG--KEDPAL 113
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + R+ G E + GV A R++V
Sbjct: 114 ELP---PAMDALMRVFKRVSGITDGAA----EGTQAATAPGV-----------CAARLLV 155
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH-SLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D P V E IV++ G+ V A
Sbjct: 156 PGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKA 215
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 216 LQAVSNHLRK 225
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)
Query: 37 NNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGK 96
NN + + + + + + + I ++S+P S + T YR LC K G +I +
Sbjct: 252 NNVNSKALSTPDFSGLSSKVSCIRQVFVVSSSSPT--SRLKDTIYRYLCPGKKIGSIIRR 309
Query: 97 SGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP--EGRMPSFSPAQEALFLIH 154
I+K R T I++ + + G EE ++ I + + SP Q LF +H
Sbjct: 310 GWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESNVFDNSNTFVSPTQNVLFRVH 369
Query: 155 DRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKII 214
DR++ + + E EE +GC++GKGG+II
Sbjct: 370 DRVISDE----VHDENFEEAS--------------------------QIGCVIGKGGQII 399
Query: 215 EQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR----ESQH 270
+ +R E+ QIRIL DH LP V S++++Q+ G+ + V A+ I+SRL +SQH
Sbjct: 400 QSIRSESGAQIRILKDDH-LPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQH 458
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---SSEEG 402
+D ++R LCP K+G +I IV+ + + + + D V G +E ++TI S E
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 403 PDDE----LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MR 457
D + P Q L + R++ +N +S+IGC+ G+ G + + +R
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVISDEVHDEN------FEEASQIGCVIGKGGQIIQSIR 403
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+GA I+IL + +P+ V +D+L+QI GE AL ++ +RL
Sbjct: 404 SESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRL 449
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G+D++FR++ P ++G+VIG+ ++ ++ ++K+AD + +E++I ISS++ D
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-D 155
Query: 405 DELFPAQEALLHIQTRIV----------DLGADKDNIITTRLLVPSSEIGCLEGRDG-SL 453
+ + A++AL I I+ L A T RLL+ S+ G L G G ++
Sbjct: 156 EMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNI 215
Query: 454 SEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLRS 505
++R S+GA I +L+ ++P C S +D +VQ+ G++ AL E+ +LRS
Sbjct: 216 EKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLRS 269
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+RI+ + G VIGK G I+ IR+ T A I + + I EER+I IS +
Sbjct: 102 FRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDE----- 156
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ A++AL I + IL+ D + G V R++++
Sbjct: 157 -MVTDAEKALEQIANLILKEDNSSF-----DASKLTAGHVAANTI---------RLLIAG 201
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNVKNAV 258
G L+G G+ IE++R + I +L LP C S S+ +VQ+ GD++ V A+
Sbjct: 202 SQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQ-LPLCASAHESDRVVQLSGDVSTVMKAL 260
Query: 259 AIISSRLR 266
I +LR
Sbjct: 261 EEIGCQLR 268
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 16/348 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++I+ +S +E
Sbjct: 47 PGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKE 106
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-ADKDN--------IITTRLLVPSSEIGCLEGRDGS 452
P+ L PA +A++ I R+ D +N + RLLV S++ L G+ GS
Sbjct: 107 DPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGS 166
Query: 453 L-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
L ++ +T A++++LS +EV + + +V+I GE AL V LR +L
Sbjct: 167 LIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHS 226
Query: 512 FQKETPPSSTGPTGSALVVEAASPIDI--TPAREVQTVTDPPAATHQSVQIPATSQPSKE 569
+ PT E S + T +R P + SV SQ
Sbjct: 227 VLPLFEKTYNAPTSQDRQAETWSDKSLLHTSSRTSIFADIPLSTKRDSVLADRESQLDLF 286
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
S Q+ S + + RV P+VT + +P +I T +
Sbjct: 287 LPSSTMSLYGQDSSLSGVH-SSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYI 345
Query: 630 SEMSGASVSLVEGQ-PEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
SGA +++ E + P+ + +++I GT +V+ AQ ++Q I S ++
Sbjct: 346 RRTSGAILTVQESRVPD--EIVVEIKGTSSEVQTAQQLIQDVISSHKE 391
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K G +IG+ G +IK + + T + I V + G +RI+ +S + DPE
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSG--KEDPEA-- 110
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA +A+ I R+ GF + E G+ R++V+
Sbjct: 111 -ALSPAMDAVVRIFKRV------SGFSETDAENQESAAGLAFSSI---------RLLVAS 154
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G +I+ ++ T +R+L D + + +E IV++ G+ V A+
Sbjct: 155 TQAINLIGKQGSLIKSIQENTSASVRVLSGDE-VQFYATANERIVEIQGEALKVLKALEA 213
Query: 261 ISSRLRE 267
+ LR+
Sbjct: 214 VVGHLRK 220
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L +++ + G+ E+I+ +S +E
Sbjct: 34 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKE 93
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
P EL PA +AL+ + R++ + A + RLLVP ++ L G+ G+
Sbjct: 94 DPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGA 153
Query: 453 -LSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ STGA I+++S E P V+ + +V+I G+ + AL V+ LR +L
Sbjct: 154 TIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFL 211
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP
Sbjct: 40 SVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSG--KEDPGL 97
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ SPA +AL + R++ G E + GV A R++V
Sbjct: 98 EL---SPAMDALMRVFKRVIGITDGAA----EGTQAAATPGV-----------CAARLLV 139
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD-HSLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D H P V+ E IV++ GD V A
Sbjct: 140 PGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 199
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 200 LQAVSNHLRK 209
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L +++ + G+ E+I+ +S +E
Sbjct: 34 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKE 93
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDGS 452
P EL PA +AL+ + R++ + A + RLLVP ++ L G+ G+
Sbjct: 94 DPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGA 153
Query: 453 -LSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ STGA I+++S E P V+ + +V+I G+ + AL V+ LR +L
Sbjct: 154 TIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFL 211
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP
Sbjct: 40 SVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSG--KEDPGL 97
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ SPA +AL + R++ G E + GV A R++V
Sbjct: 98 EL---SPAMDALMRVFKRVIGITDGAA----EGTQAAATPGV-----------CAARLLV 139
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD-HSLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D H P V+ E IV++ GD V A
Sbjct: 140 PGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 199
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 200 LQAVSNHLRK 209
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++I+ +S +E
Sbjct: 46 PGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKE 105
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-ADKDN--------IITTRLLVPSSEIGCLEGRDGS 452
P+ L PA +A++ I R+ L D +N + RLLV S++ L G+ GS
Sbjct: 106 EPEAALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGS 165
Query: 453 L-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD- 510
L ++ +T A++++LS +EV + + + +V+I GE AL V LR +L
Sbjct: 166 LIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHS 225
Query: 511 ---FFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQP 566
F+K T +ST A S + T + D P +T + SV SQ
Sbjct: 226 VLPLFEK-TYNASTSQDRQAETWSDKSLLHTTSRTSI--FADIPYSTKRDSVLADRESQL 282
Query: 567 SKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLL 626
S Q+ S + + RV P+VT + +P +I T +
Sbjct: 283 DSFLPSSTMSLYGQDSSLSGVR-SSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNI 341
Query: 627 TRFSEMSGASVSLVEGQ-PEGTQKIIQISGTPEQVERAQSVLQGFILSTQD 676
SGA +++ E + P+ + +++I GT +V+ AQ ++Q I S ++
Sbjct: 342 EYIRRTSGAILTVQESRVPD--EIVVEIKGTSSEVQTAQQLIQDVISSHKE 390
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K G +IG+ G +IK + + T + I V + G +RI+ +S + +PE
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSG--KEEPEA-- 109
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA +A+ I R+ G E + G F + R++V+
Sbjct: 110 -ALSPAMDAVVRIFKRV---------SGLSETDAENKESAAGLAF------CSIRLLVAS 153
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G +I+ ++ T +R+L D + ++ E IV++ G+ V A+
Sbjct: 154 TQAINLIGKQGSLIKSIQENTSASVRVLSGDE-VQSYATVDERIVEIQGEALKVLKALEA 212
Query: 261 ISSRLRE 267
+ LR+
Sbjct: 213 VVGHLRK 219
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
P + P + D VFR++ P+ KVG +IG V+ + E +K+ D V G+ E+I
Sbjct: 36 PPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERI 95
Query: 395 ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKD-----------NIITTRLLVPSSEI 443
+ +S++E P+ + PA + LL + R+ + G+ D ++ +RLLV +++
Sbjct: 96 VLVSAKEDPEATISPAMDGLLRVHRRVTE-GSSGDGEPVEHIILPSGLVQSRLLVTATQA 154
Query: 444 GCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
G L GR +EE+P C D +V++ GEI + A+ V + L
Sbjct: 155 GSLIGR-------------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHL 195
Query: 504 RSYL 507
R +L
Sbjct: 196 RKFL 199
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 40/187 (21%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K G +IG+ G +K + + T + I + + +PG ERI+ +S + DPE
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVS--AKEDPEA-- 106
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA + L +H R+ E G GE E G+ V +R++V+
Sbjct: 107 -TISPAMDGLLRVHRRVTEGSSGD---GEPVEHIILPSGL-----------VQSRLLVTA 151
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
G L+G R LP C + +V+V G+I V+ A+ +
Sbjct: 152 TQAGSLIG---------------------RQEELPLCALADDRMVEVQGEILKVQKAMEL 190
Query: 261 ISSRLRE 267
+ S LR+
Sbjct: 191 VVSHLRK 197
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
P + P + D VFR++ P+ KVG +IG V+ + E +K+ D V G+ E+I
Sbjct: 36 PPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERI 95
Query: 395 ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKD-----------NIITTRLLVPSSEI 443
+ +S++E P+ + PA + LL + R+ + G+ D ++ +RLLV +++
Sbjct: 96 VLVSAKEDPEATISPAMDGLLRVHRRVTE-GSSGDGEPVEHIILPSGLVQSRLLVTATQA 154
Query: 444 GCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
G L GR +EE+P C D +V++ GEI + A+ V + L
Sbjct: 155 GSLIGR-------------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHL 195
Query: 504 RSYL 507
R +L
Sbjct: 196 RKFL 199
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 40/187 (21%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ K G +IG+ G +K + + T + I + + +PG ERI+ +S + DPE
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVS--AKEDPEA-- 106
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ SPA + L +H R+ E G GE E G+ V +R++V+
Sbjct: 107 -TISPAMDGLLRVHRRVTEGSSGD---GEPVEHIILPSGL-----------VQSRLLVTA 151
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
G L+G R LP C + +V+V G+I V+ A+ +
Sbjct: 152 TQAGSLIG---------------------RQEELPLCALADDRMVEVQGEILKVQKAMEL 190
Query: 261 ISSRLRE 267
+ S LR+
Sbjct: 191 VVSHLRK 197
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + + VFR+L P KVG VIG ++ + E +KV D G ++ + IS+++
Sbjct: 109 PGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKD 168
Query: 402 GPDDELFPAQEALLHIQTRIVD-LGADKDN-------IITTRLLVPSSEIGCLEGRDGS- 452
PD L PA + LL + RI D L + D + TRLLVP+S+ G L G+ G+
Sbjct: 169 EPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGAT 228
Query: 453 LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ ++ ++ ++IL E VP D +V+I GE A+ + + LR +L
Sbjct: 229 IKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFL 281
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
N K P + +RIL K G VIG+ G IK + + + A I V + PG +
Sbjct: 100 NAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPD 159
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
R + IS + +P+ +P PA + L +H RI + G GE ++ G VG
Sbjct: 160 RAVMIS--AKDEPDAPLP---PAVDGLLRVHKRITD-----GLDGESDQPQRAAGTVG-- 207
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
TR++V G L+GK G I+ ++ +K +RIL S+P +
Sbjct: 208 ---------PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIL---ESVPPVALSDDR 255
Query: 244 IVQVVGDINNVKNAVAIISSRLRE 267
+V++ G+ +V AV +I+S LR+
Sbjct: 256 VVEIQGEPLDVHKAVELIASHLRK 279
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 139/332 (41%), Gaps = 63/332 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 40 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL---- 95
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ LI +++L GEE F R R
Sbjct: 96 -------FDEVMKAMELILEKLLAE-------GEE--------------FNEAEARPKVR 127
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ E+ I+I P+D++ V + + +V V G +N
Sbjct: 128 LVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTVTGTFDNQM 184
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFS 311
NA+ +I +L E H+ L SP + FP+ VP + P +
Sbjct: 185 NAIDLILKKLSED-----VHYPPNLSSPFPYAGLTFPNYPGVPVGYMIPQVPYNNAV--- 236
Query: 312 GSNYRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGI 369
NY NN YG R Y + PM E L + + +G V+G + I
Sbjct: 237 --NYGPNNGYGGR---YQNNKPSTPMRSPASNEAQESLTIGIAD--EHIGAVVGRAGRNI 289
Query: 370 VELLQNEIGVDLKVADPVD---GSDEQIITIS 398
E++Q G +K++D D G+ ++ +TI+
Sbjct: 290 TEIIQAS-GARIKISDRGDFISGTSDRKVTIT 320
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 8/174 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D V+R++ P+ KVG +IG +V+ + + G ++V + G+ ++I+ IS E
Sbjct: 48 PGWPGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGRE 107
Query: 402 GPDDELFPAQEALLHIQTRIVDL-GAD------KDNIITTRLLVPSSEIGCLEGRDGS-L 453
PD ++ PA +A+ + R+ L G D + +LL+ SS+ L GR GS +
Sbjct: 108 DPDAQVSPAMDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTI 167
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
E++ +GA++++LS ++V + + +V+I GE DA V +LR +L
Sbjct: 168 KEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFL 221
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P YR++ +K G +IG+ G ++K + + TGA I V E G+ +RI+ IS
Sbjct: 46 KWPGWPGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISG 105
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
R DP+ ++ SPA +A+F + R+ +GG
Sbjct: 106 --REDPDAQV---SPAMDAVFRVFKRVAGLEGGDPGAAAAGF-----------------A 143
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+ +++++ L+G+ G I++++ + +R+L D +P + E IV++ G+
Sbjct: 144 FCSFKLLMASSQAVHLIGRHGSTIKEIQERSGASLRVLSEDDVVPYATA-DERIVEIRGE 202
Query: 251 INNVKNAVAIISSRLRE 267
V +A + +LR+
Sbjct: 203 GLKVLDAFEAVVRQLRK 219
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + VFR++ P+ KVG +IG +++ E ++V D G+ ++I+ IS +E
Sbjct: 40 PGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKE 99
Query: 402 GPDDELFPAQEALLHIQTRIVDLG-------ADKDNIITTRLLVPSSEIGCLEGRDGSL- 453
+ L PA +A++ + R+ A + RLLV S++ L G+ GSL
Sbjct: 100 DLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLI 159
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ +TGA++++LS +EVP + + +V++ GE AL V LR +L
Sbjct: 160 KSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFL 213
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
+R++ +K G +IG+ G +IK + T A I V + G +RI+ IS + D E +
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISG--KEDLEAPL 105
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
SPA +A+ + R+ GF E F + R++V+
Sbjct: 106 ---SPAMDAVIRVFKRV------SGF-----SEIDAKNKASAVAF------CSVRLLVAS 145
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
L+GK G +I+ ++ T +R+L D +P + E IV++ G+ V A+
Sbjct: 146 TQAINLIGKQGSLIKSIQENTGASVRVLSGDE-VPFYAAADERIVELQGEAMKVLKALEA 204
Query: 261 ISSRLRE 267
+ LR+
Sbjct: 205 VVGHLRK 211
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR 133
S + + R+L +A +IGK GS+IKSI+++TGA + V + GDE +D R
Sbjct: 132 SAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRV---LSGDEVPFYAAADERI 188
Query: 134 RDPEGRMPSFSPAQEAL------FLIHDRIL 158
+ +G A EA+ FL+ + +L
Sbjct: 189 VELQGEAMKVLKALEAVVGHLRKFLVDNSVL 219
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 137/329 (41%), Gaps = 63/329 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEG 138
R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL------- 95
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
F +A+ LI +++L GEE F R R+VV
Sbjct: 96 ----FGEVMKAMELILEKLLAE-------GEE--------------FNEAEARPKVRLVV 130
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G ++GKGG I+ E+ I+I P+D++ V + + +V V G +N NA+
Sbjct: 131 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTVTGTFDNQMNAI 187
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFSGSN 314
+I +L E H+ L SP + FP VP + P + N
Sbjct: 188 DLILKKLSED-----VHYPANLSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAV-----N 237
Query: 315 YRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGIVEL 372
Y NN YG R Y + PM E L + + +G V+G + I E+
Sbjct: 238 YGPNNGYGGR---YQNNKPSTPMRSPASNEAQESLTIGIAD--EHIGAVVGRAGRNITEI 292
Query: 373 LQNEIGVDLKVADPVD---GSDEQIITIS 398
+Q G +K++D D G+ ++ +TI+
Sbjct: 293 IQAS-GARIKISDRGDFISGTSDRKVTIT 320
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + VFRML KVG +IG+ V L E ++V + E+++ I ++E
Sbjct: 56 PGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKE 115
Query: 402 GPDDELFPAQEALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLEGRDGSLSEM-R 457
PD+ + PA +ALL + IV+ LG D+ + TR+L+PS + L G GS+ +
Sbjct: 116 QPDEPIPPAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIE 175
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ +I++L PA + D +V+I G+ R AL V LR YL
Sbjct: 176 EASQTDIRVLDCNLPPAALD-EDRIVEIWGQPTRVRKALELVARHLRKYL 224
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 58 SINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
S +++N A N + P TT +R+L K G +IG+ G ++ + + T A + V
Sbjct: 42 SADDTNCSAGEN-RYPGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGG 100
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
ER++ I + P+ +P PA +AL ++ I+ DG G
Sbjct: 101 HFAAAERVVLI--FAKEQPDEPIP---PAMDALLRVYQNIVNDDGLG------------- 142
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
G + V TR+++ L+G+ G +I + ++T IR+L D +LP
Sbjct: 143 --------MGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQTDIRVL--DCNLPPA 192
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ IV++ G V+ A+ +++ LR+
Sbjct: 193 ALDEDRIVEIWGQPTRVRKALELVARHLRK 222
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 388 DGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLE 447
+ S+E++I +SS+E PDD + P EAL+ + ++ L +++ +TTRL+VPS+++GC+
Sbjct: 561 NASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLA--ENHQLTTRLVVPSNKVGCIL 618
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
G G ++EMRR TGA I++ S+ + P +S +ELVQ + I R A
Sbjct: 619 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQHISLILVDRHA 667
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 33/146 (22%)
Query: 107 HTGAWINVHELIP-GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGG 165
TGA V E+ EER+I +S D SP EAL L+H +
Sbjct: 548 QTGACGQVKEVGKNASEERLIVVSSQEIPDDP-----VSPTIEALILLHSK--------- 593
Query: 166 FYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQI 225
+++ TR+VV VGC+LG+GGK+I +MR T +I
Sbjct: 594 -----------------ASTLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEI 636
Query: 226 RILPRDHSLPRCVSMSEEIVQVVGDI 251
R+ + P+ +S EE+VQ + I
Sbjct: 637 RVYSKADK-PKYLSFDEELVQHISLI 661
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 632 MSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+SGA V L E P ++ I++I G P+QV+ AQS+LQGFI
Sbjct: 894 ISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFI 933
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 137/329 (41%), Gaps = 63/329 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEG 138
R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL------- 95
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
F +A+ LI +++L GEE F R R+VV
Sbjct: 96 ----FGEVMKAMELILEKLLAE-------GEE--------------FNEAEARPKVRLVV 130
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G ++GKGG I+ E+ I+I P+D++ V + + +V V G +N NA+
Sbjct: 131 PNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTVTGTFDNQMNAI 187
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFSGSN 314
+I +L E H+ L SP + FP VP + P + N
Sbjct: 188 DLILKKLSED-----VHYPANLSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAV-----N 237
Query: 315 YRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGIVEL 372
Y NN YG R Y + PM E L + + +G V+G + I E+
Sbjct: 238 YGPNNGYGGR---YQNNKPSTPMRSPASNEAQESLTIGIAD--EHIGAVVGRAGRNITEI 292
Query: 373 LQNEIGVDLKVADPVD---GSDEQIITIS 398
+Q G +K++D D G+ ++ +TI+
Sbjct: 293 IQAS-GARIKISDRGDFISGTSDRKVTIT 320
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 388 DGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLE 447
+ S+E++I +SS+E PDD + P EAL+ + +++ L +++ +TTRL+VPS+++GC+
Sbjct: 220 NASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLA--ENHQLTTRLVVPSNKVGCIL 277
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
G G ++EMRR TGA I++ S+ + P +S +ELVQ
Sbjct: 278 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 315
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 33/141 (23%)
Query: 107 HTGAWINVHELIP-GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGG 165
TGA V E+ EER+I +S D SP EAL L+H ++
Sbjct: 207 QTGACGQVKEVGKNASEERLIVVSSQEIPDD-----PVSPTIEALILLHSKV-------- 253
Query: 166 FYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQI 225
+++ TR+VV VGC+LG+GGK+I +MR T +I
Sbjct: 254 ------------------STLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEI 295
Query: 226 RILPRDHSLPRCVSMSEEIVQ 246
R+ + P+ +S EE+VQ
Sbjct: 296 RVYSKADK-PKYLSFDEELVQ 315
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 164/385 (42%), Gaps = 51/385 (13%)
Query: 322 PRPSG------YSI-EAGAAPM----SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
P P+G Y+I +A A P S+ P + VFR++ P+ KVG +IG ++
Sbjct: 7 PIPNGTLQSESYTIFDAAANPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELI 66
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
+ E ++V D G+ ++I+ IS +E + L PA +A+L I R+ L +N
Sbjct: 67 KKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSPAMDAILRIFKRVSGLSETDNN 126
Query: 431 --------IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE 481
+ + RLLV S++ L G+ G S+ ++ +TGA I++LS +E+P+ +
Sbjct: 127 NTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADER 186
Query: 482 LVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPA 541
++ + GE AL V LR +L SS P + E I+
Sbjct: 187 IIDLQGETLKVLKALEAVVGHLRKFLV---------DSSVIP-----LFEKTCNATISQD 232
Query: 542 REVQTVTDPPAATHQSVQIPATSQPSKE--------------AAGSVSETVKQNESERRE 587
R+ D P+ S P+K + S Q+ S
Sbjct: 233 RQTDAWADKPSLYSASQPSIVADIPTKRDSFFADRESQLDSLLSSSTMSLYGQDSSSISG 292
Query: 588 DVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ-PEG 646
+ NR +VT + +P +I T + SGA +++ E + P+
Sbjct: 293 LRSSAFNRASASIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPD- 351
Query: 647 TQKIIQISGTPEQVERAQSVLQGFI 671
+ I++I GT QV+ AQ ++Q I
Sbjct: 352 -EIIVEIKGTSTQVQTAQQLIQEVI 375
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 47/268 (17%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG 120
N + + S + P +R++ +K G +IG+ G +IK + T A I V + G
Sbjct: 26 NPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVG 85
Query: 121 DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV 180
+RI+ IS + D E + SPA +A+ I R+ G E + GV
Sbjct: 86 TPDRIVLISG--KEDLEAPL---SPAMDAILRIFKRV------SGL-SETDNNNTAAAGV 133
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
+ R++V+ L+GK G I+ ++ T IR+L D LP
Sbjct: 134 A---------LCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDE-LPSYAGA 183
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA 300
E I+ + G+ V A+ + LR +F D +P T
Sbjct: 184 DERIIDLQGETLKVLKALEAVVGHLR------------------KFLVDSSVIPLFEKTC 225
Query: 301 RRPSMDGARFSGSNYRSNNYGPRPSGYS 328
A S + +++ + +PS YS
Sbjct: 226 ------NATIS-QDRQTDAWADKPSLYS 246
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 76/327 (23%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL--IPGDEERIIEISDTRRRDPE 137
+ R++C GGVI K G I IR+ +GA I V D+ + ++ R P
Sbjct: 44 SLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPR 103
Query: 138 GRMPSFSPAQEALFL--IHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G S +FL + R+ + + G + R
Sbjct: 104 GPQTS-----HCIFLYRMCMRLWDWNCPSGTF-------------------------TVR 133
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++VS +GC++GKGG+II+ +R E+ QIRIL DH LP C S E++Q+ + + V+
Sbjct: 134 LLVSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDH-LPSCSLSSNELIQISKEPSIVR 192
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+ I+SRL ++ R + F YV +
Sbjct: 193 KILYQIASRLHDNPSRSQHLF--------------VYVVPI------------------- 219
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
Y S + +GA M ++ ++ ++CPI +G +IG+ + I+ ++
Sbjct: 220 ---GYSSSGSLMGLTSGAPIMDEA----SSKEFSLCLVCPIGNIGGMIGKGDVIINQIRQ 272
Query: 376 EIGVDLKV-ADPVDGSDEQIITISSEE 401
E G +KV + V +++ ++TIS++E
Sbjct: 273 EFGATIKVDSTSVVEANDCLVTISAKE 299
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-ADPVDGSDEQIITISSEE------G 402
R++CPI +G VI + + ++ E G +KV + +D+ ++TI ++E G
Sbjct: 45 LRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPRG 104
Query: 403 PDDE--LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRS 459
P +F L + R+ D T RLLV ++IGC+ G+ G + + +R
Sbjct: 105 PQTSHCIF-----LYRMCMRLWDWNCPSGTF-TVRLLVSFNQIGCVIGKGGQIIQSIRSE 158
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+GA I+IL + +P+C ++EL+QI E R L ++ +RL
Sbjct: 159 SGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRL 202
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D VFR++ P+ KVG +IG +++ L E +++ + G+ E+I+ +S +E
Sbjct: 40 PGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE 99
Query: 402 GPDDELFPAQEALLHIQTRIVDL---------GADKDNIITTRLLVPSSEIGCLEGRDG- 451
PD EL PA +AL+ + + + A ++ RLLVP ++ L G+ G
Sbjct: 100 DPDLELPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGA 159
Query: 452 SLSEMRRSTGANIQILS--REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ ++ ST A I+++S E P V+ + +V+I G+ + AL V+ LR +L
Sbjct: 160 TIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFL 217
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+ +R++ +K G +IG+ G +IK + + T A + + E G ERI+ +S + DP+
Sbjct: 46 SVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG--KEDPDL 103
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+P PA +AL + + G + + A R++V
Sbjct: 104 ELP---PAMDALMRVFKXVTGITDGAAEXTQAAAT---------------PDVCAARLLV 145
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD-HSLPRCVSMSEEIVQVVGDINNVKNA 257
L+GK G I+ ++ T IR++ D H P V+ E IV++ GD V A
Sbjct: 146 PGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
Query: 258 VAIISSRLRE 267
+ +S+ LR+
Sbjct: 206 LQAVSNHLRK 215
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
+G A A + P + D VFR++ P+ KVG +IG +++ L +E ++V
Sbjct: 47 TGTDTAATAVTPPEQRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVL 106
Query: 385 DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG-ADKDN-------IITTRL 436
D G ++II IS +E + + PA +A++ I R+ L D +N + + RL
Sbjct: 107 DADLGIPDRIILISGKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRL 166
Query: 437 LVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
LV S++ L G+ G+ + ++ S+GA++++LS +EV + + +V + GE A
Sbjct: 167 LVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKA 226
Query: 496 LVEVTTRLRSYL 507
L V LR +L
Sbjct: 227 LEAVIGHLRKFL 238
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 43 GNNNNNTNNIMNNNTSINNSNNRANSNPKD--PSLMVTTTYRILCHDMKAGGVIGKSGSI 100
N +T I + ++ A + P+ P +R++ K GG+IG+ G +
Sbjct: 32 ATTNESTQEIETVTETGTDTAATAVTPPEQRWPGWPGDCVFRLIVPVGKVGGIIGRKGDL 91
Query: 101 IKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILES 160
IK + T A + V + G +RII IS + + SPA +A+ I R+
Sbjct: 92 IKKLCDETKARVRVLDADLGIPDRIILISGKEELE-----AAISPAMDAVIRIFKRV--- 143
Query: 161 DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
E + E G GV + R++V+ L+GK G II ++
Sbjct: 144 ----SGLSETDSENKGPAGV---------TLCSIRLLVASTQAISLIGKQGTIIRSIQES 190
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ +R+L D + + E IV + G+ V A+ + LR+
Sbjct: 191 SGASVRVLSGDE-VQYFATAEERIVDLQGEALMVLKALEAVIGHLRK 236
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
+ +S K P+ + + R+L +A +IGK G+II+SI++ +GA + V + GDE
Sbjct: 147 SETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVRV---LSGDEV 203
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEAL------FLIHDRIL 158
+ ++ R D +G A EA+ FL+ IL
Sbjct: 204 QYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSIL 244
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P + + VFR+L KVG +IG ++ + +E +K+ D G E+ + I
Sbjct: 110 DTKWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMI 169
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD-LGADKDNIIT-------TRLLVPSSEIGCLEGR 449
S+++ PD + PA + LL + RI D L ++ D TRLLVP+S+ G L G+
Sbjct: 170 SAKDEPDALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGK 229
Query: 450 DG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
G ++ ++ ++ ++IL E VP D +V+I GE A+ + LR +L
Sbjct: 230 QGTTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFL 286
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 24/197 (12%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P + +R+L K G +IG+ G IK + + A I + + PG ER + IS
Sbjct: 112 KWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMIS- 170
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +P+ +P PA + L +H+RI + G E ++ G G
Sbjct: 171 -AKDEPDALVP---PAIDVLLRVHNRITD-----GLDSETDQAQKGASPAG--------- 212
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RIL ++P + +V++ G+
Sbjct: 213 --PTRLLVPASQAGSLIGKQGTTIKSIQDASKCALRIL---ENVPPVALNDDRVVEIQGE 267
Query: 251 INNVKNAVAIISSRLRE 267
++V AV +I++ LR+
Sbjct: 268 PHDVHKAVELIANHLRK 284
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 92/349 (26%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D++FR++ P K+G+VIG+ ++ ++ + +K+AD V +E++I ISS+E ++
Sbjct: 50 DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKEN-ENG 108
Query: 407 LFPAQEALLHIQT-------------------RIVDLGADKDNIITTRLLVPSSEIGCLE 447
A+ AL I ++V+ G N T RLL+ S+ G L
Sbjct: 109 ATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAAN--TIRLLIAGSQAGSLI 166
Query: 448 GRDG-SLSEMRRSTGANIQILSREEVPACVSG--TDELVQIVGEIQAARDALVEVTTRLR 504
G G ++ ++R S+GA I +L+ ++P C S +D +VQI G++ AL E+ +LR
Sbjct: 167 GMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLR 226
Query: 505 SYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATS 564
E PP Q ++ P+ + +V P
Sbjct: 227 ----------ENPPK-------------------------QVISISPSYNYSAV--PFQQ 249
Query: 565 QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKT 624
+ AA V+ +E+++P+ + LI +S +
Sbjct: 250 YAPQAAADYVT------------------------------MEMMVPETMMGGLIGRSGS 279
Query: 625 LLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
++R SGA + + G+ + IQ++G+ +QV A+ + +I S
Sbjct: 280 NISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYS 328
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+RI+ K G VIGK G I+ IR+ T A I + + + EER+I IS +
Sbjct: 51 VIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENEN--- 107
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA--TRM 196
+ A+ AL I + IL E++ GGGV G G+ A R+
Sbjct: 108 ---GATDAENALQRIAELILN---------EDDGGSSAGGGVEIGKLVNAGHVAANTIRL 155
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM--SEEIVQVVGDINNV 254
+++ G L+G G+ I ++R + I +L + LP C S S+ +VQ+ GD+ V
Sbjct: 156 LIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQ-LPLCASAYESDRVVQISGDVPVV 214
Query: 255 KNAVAIISSRLRES 268
A+ I +LRE+
Sbjct: 215 LKALEEIGCQLREN 228
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 138/331 (41%), Gaps = 62/331 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 41 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL---- 96
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ LI +++L GEE E R R
Sbjct: 97 -------FDEVIKAMELILEKLLAE-------GEESNE--------------AEARPKVR 128
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ ++ I+I P+D++ V + + +V V G +++
Sbjct: 129 LVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNF---VGLHDRLVTVTGPLDHQM 185
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFS 311
A+ +I S+L E H+ L SP + FP VP + P +
Sbjct: 186 RAIYLILSKLSED-----VHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAV--- 237
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGIV 370
NY N YG R Y + PM + L + + +G V+G + I
Sbjct: 238 --NYGPNGYGGR---YQNNKPSTPMRSPANNDAQDSLTIGIAD--EHIGAVVGRAGRNIT 290
Query: 371 ELLQNEIGVDLKVADPVD---GSDEQIITIS 398
E++Q G +K++D D G+ E+ +TI+
Sbjct: 291 EIIQAS-GARIKISDRGDFIAGTSERKVTIT 320
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 183/430 (42%), Gaps = 81/430 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH R+D
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVH-----------------RKD------ 226
Query: 142 SFSPAQEALFLIHD---------RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
S A++A+ + + +I+E ++E YG G +
Sbjct: 227 SLGAAEKAITIYGNPENCTNACKKIMEVT--------QQEAYGLSKG-----------EI 267
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDI 251
+ R++ +G ++GKGG I+++ +T T+I + S+ + + E I+ V G I
Sbjct: 268 SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV----SSINDINNFNLERIITVKGSI 323
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+N+ A ++ISS+LR+S D + FP + M+ S G
Sbjct: 324 DNMSKAESMISSKLRQSYENDLQA----MAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLY 379
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
GS GP P Y + P + ++ F + P VG +IG +
Sbjct: 380 GS-------GPAPYPYQT---SLPTQQGIPIGDTQETAF-LYIPNTSVGAIIGSKGSHIR 428
Query: 372 LLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
+ G +K+A PV+ +++ +TI G + + AQ + +G
Sbjct: 429 NIIRFSGASVKIAPIEQDKPVEQQNDRKVTIV---GSPESQWKAQYLIFEKMREEGFVGG 485
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
+D +T +LVPS+++G + G+ G ++ E++R TG+ I+ LS ++ + + + VQI
Sbjct: 486 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQI 544
Query: 486 VGEIQAARDA 495
+G + + A
Sbjct: 545 IGPFFSVQSA 554
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 388 DGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLE 447
+ S+E++I +SS+E PDD + P EAL+ + ++ L +++ +TTRL+VPS+++GC+
Sbjct: 543 NASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLA--ENHQLTTRLVVPSNKVGCIL 600
Query: 448 GRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
G G ++EMRR TGA I++ S+ + P +S +ELVQ
Sbjct: 601 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 638
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 33/141 (23%)
Query: 107 HTGAWINVHELIP-GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGG 165
TGA V E+ EER+I +S D SP EAL L+H +
Sbjct: 530 QTGACGQVKEVGKNASEERLIVVSSQEIPDDP-----VSPTIEALILLHSK--------- 575
Query: 166 FYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQI 225
+++ TR+VV VGC+LG+GGK+I +MR T +I
Sbjct: 576 -----------------ASTLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEI 618
Query: 226 RILPRDHSLPRCVSMSEEIVQ 246
R+ + P+ +S EE+VQ
Sbjct: 619 RVYSKADK-PKYLSFDEELVQ 638
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 632 MSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+SGA V L E P ++ I++I G P+QV+ AQS+LQGFI
Sbjct: 803 ISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFI 842
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 183/430 (42%), Gaps = 81/430 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH R+D
Sbjct: 140 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVH-----------------RKD------ 176
Query: 142 SFSPAQEALFLIHD---------RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
S A++A+ + + +I+E ++E YG G +
Sbjct: 177 SLGAAEKAITIYGNPENCTNACKKIMEVT--------QQEAYGLSKG-----------EI 217
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDI 251
+ R++ +G ++GKGG I+++ +T T+I + S+ + + E I+ V G I
Sbjct: 218 SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV----SSINDINNFNLERIITVKGSI 273
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+N+ A ++ISS+LR+S D + FP + M+ S G
Sbjct: 274 DNMSKAESMISSKLRQSYENDLQA----MAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLY 329
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
GS GP P Y + P + ++ F + P VG +IG +
Sbjct: 330 GS-------GPAPYPYQT---SLPTQQGIPIGDTQETAF-LYIPNTSVGAIIGSKGSHIR 378
Query: 372 LLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
+ G +K+A PV+ +++ +TI G + + AQ + +G
Sbjct: 379 NIIRFSGASVKIAPIEQDKPVEQQNDRKVTIV---GSPESQWKAQYLIFEKMREEGFVGG 435
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
+D +T +LVPS+++G + G+ G ++ E++R TG+ I+ LS ++ + + + VQI
Sbjct: 436 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQI 494
Query: 486 VGEIQAARDA 495
+G + + A
Sbjct: 495 IGPFFSVQSA 504
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 137/332 (41%), Gaps = 63/332 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + +E PG +RII +S
Sbjct: 41 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGL---- 96
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ LI +++L GEE F R R
Sbjct: 97 -------FDEVMKAMELILEKLLAE-------GEE--------------FNEAEARPKVR 128
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ E+ I+I P+D++ V + + +V + G +N
Sbjct: 129 LVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTITGTFDNQM 185
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFS 311
NA+ +I +L E H+ L SP + FP VP + P +
Sbjct: 186 NAIDLILKKLSED-----VHYPPNLSSPFPYAGLTFPSYPGVPVGYMIPQVPYSNAV--- 237
Query: 312 GSNYRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGI 369
NY NN YG R Y PM E L + + +G V+G + I
Sbjct: 238 --NYGPNNGYGGR---YQNNKPTTPMRSPASNEAQESLTIGIAD--EHIGAVVGRAGRNI 290
Query: 370 VELLQNEIGVDLKVADPVD---GSDEQIITIS 398
E++Q G +K++D D G+ ++ +TI+
Sbjct: 291 TEIIQAS-GARIKISDRGDYISGTSDRKVTIT 321
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 138/331 (41%), Gaps = 62/331 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 11 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL---- 66
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ LI +++L GEE E R R
Sbjct: 67 -------FDEVIKAMELILEKLLAE-------GEESNEAEA--------------RPKVR 98
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ ++ I+I P+D++ V + + +V V G +++
Sbjct: 99 LVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNF---VGLHDRLVTVTGPLDHQM 155
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMDGARFS 311
A+ +I S+L E H+ L SP + FP VP + P +
Sbjct: 156 RAIYLILSKLSED-----VHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAV--- 207
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES-EGIV 370
NY N YG R Y + PM + L + + +G V+G + I
Sbjct: 208 --NYGPNGYGGR---YQNNKPSTPMRSPANNDAQDSLTIGIAD--EHIGAVVGRAGRNIT 260
Query: 371 ELLQNEIGVDLKVADPVD---GSDEQIITIS 398
E++Q G +K++D D G+ E+ +TI+
Sbjct: 261 EIIQAS-GARIKISDRGDFIAGTSERKVTIT 290
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 182/430 (42%), Gaps = 81/430 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH R+D
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVH-----------------RKD------ 226
Query: 142 SFSPAQEALFLIHD---------RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
S A++A+ + + +I+E ++E YG G +
Sbjct: 227 SLGAAEKAITIYGNPENCTNACKKIMEVT--------QQEAYGLSKG-----------EI 267
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDI 251
+ R++ +G ++GKGG I+++ +T T+I + S+ + + E I+ V G I
Sbjct: 268 SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV----SSINDINNFNLERIITVKGSI 323
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+N+ A ++IS++LR+S D + FP + M+ S G
Sbjct: 324 DNMSKAESMISNKLRQSYENDLQA----MAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLY 379
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
GS GP P Y + P + ++ F + P VG +IG +
Sbjct: 380 GS-------GPAPYPYQ---ASLPTQQGIPIGDTQETAF-LYIPNTSVGAIIGSKGSHIR 428
Query: 372 LLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
+ G +K+A PVD +++ +TI G + + AQ + +
Sbjct: 429 NIIRFSGASVKIAPIEQDKPVDQQNDRKVTIV---GSPESQWKAQYLIFEKMREEGFVAG 485
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
+D +T +LVPS+++G + G+ G ++ E++R TG+ I+ LS ++ + + + VQI
Sbjct: 486 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQI 544
Query: 486 VGEIQAARDA 495
+G + + A
Sbjct: 545 IGPFFSVQSA 554
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 183/433 (42%), Gaps = 87/433 (20%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH R+D
Sbjct: 190 RILVQSEMVGAIIGRQGSTIRQITQMTRARVDVH-----------------RKD------ 226
Query: 142 SFSPAQEALFLIHD---------RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
S A++A+ + + +I+E ++E YG G +
Sbjct: 227 SLGAAEKAITIYGNPENCTNACKKIMEVT--------QQEAYGLSKG-----------EI 267
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDI 251
+ R++ +G ++GKGG I+++ +T T+I + S+ + + E I+ V G I
Sbjct: 268 SLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV----SSINDINNFNLERIITVKGSI 323
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+N+ A ++ISS+LR+S D + FP + M+ S G
Sbjct: 324 DNMSKAESMISSKLRQSYENDLQA----MAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLY 379
Query: 312 GSNYRSNNYGPRPSGYSIE---AGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
G+ GP P Y P+ D+ + + + P VG +IG
Sbjct: 380 GT-------GPAPYPYQTSLPTQQGIPIGDTQETAF-------LYIPNTSVGAIIGSKGS 425
Query: 369 IVELLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD 423
+ + G +K+A PV+ +++ +TI G + + AQ +
Sbjct: 426 HIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIV---GSPESQWKAQYLIFEKMREEGF 482
Query: 424 LGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDEL 482
+G +D +T +LVPS+++G + G+ G ++ E++R TG+ I+ LS ++ + + +
Sbjct: 483 VGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEAT 541
Query: 483 VQIVGEIQAARDA 495
VQI+G + + A
Sbjct: 542 VQIIGPFFSVQSA 554
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 46 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL---- 101
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ L+ +++L GEE F R R
Sbjct: 102 -------FDEVIKAMELVLEKLLAE-------GEE--------------FNEAEARPKFR 133
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ ++ I+I P+D++ V + + +V + G NN
Sbjct: 134 LVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNNF---VGLHDRLVTITGPFNNQM 190
Query: 256 NAVAIISSRLRESQH 270
A+ +I S+L E H
Sbjct: 191 RAIYLILSKLSEDVH 205
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELF 408
VFRML P KVG VIG S + L E ++V + E+ + I ++E PD+
Sbjct: 60 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 119
Query: 409 PAQEALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANI 464
PA +ALL + I++ L +NI+ R+L PS + L G GS ++ +++++ NI
Sbjct: 120 PAIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 179
Query: 465 QILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
++ + P + D +++I G AL V LR YL
Sbjct: 180 HVIDGDLPPVALED-DMIIEIWGLPARVHQALELVACHLRKYL 221
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD 121
+N A N +DP T+ +R+L K G VIG SG ++ + + T A + V
Sbjct: 43 TNCSAGEN-RDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAA 101
Query: 122 EERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVG 181
ER + I + P+ P PA +AL +++ I+ DG Y
Sbjct: 102 AERAVII--FAKEQPDEPKP---PAIDALLRVYECIINDDGLDVRY-------------- 142
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
N V R++ L+G G +I ++ +KT I ++ D LP
Sbjct: 143 -------NNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVI--DGDLPPVALED 193
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRE 267
+ I+++ G V A+ +++ LR+
Sbjct: 194 DMIIEIWGLPARVHQALELVACHLRK 219
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEG 138
R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL------- 95
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
F +A+ LI +++L + GEE F R R+VV
Sbjct: 96 ----FGEVMKAMELILEKLLAELL---YQGEE--------------FNEAEARPKVRLVV 134
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G ++GKGG I+ E+ I+I P+D++ V + + +V V G +N NA+
Sbjct: 135 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTVTGTFDNQMNAI 191
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV 293
+I +L E H+ L SP + + Y+
Sbjct: 192 DLILKKLSED-----VHYPANLSSPFPYAGESCYL 221
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 43/259 (16%)
Query: 66 ANSNPKDPSL---MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIP 119
A+ PK PSL T R L + AG VIGK GS I + +GA I + HE P
Sbjct: 20 ASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFP 79
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
G +RII +S + + Q A+ LI ++L + E++ +
Sbjct: 80 GTTDRIIMVSG-----------AINEIQRAVELILSKLLSE-----LHSEDDND------ 117
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ R+VV G ++GKGG I +++ I+I P+D++
Sbjct: 118 --------AEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNY---YG 166
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
++ +V + G + A+ +I S+L E H +S + P +F VP+ T
Sbjct: 167 QNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQS-MNSPFSYPGVYFSGYQGVPY---T 222
Query: 300 ARRPSMDGARFSGSNYRSN 318
PS+ ++ NYR N
Sbjct: 223 YVLPSVAPPAYNAVNYRPN 241
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
SD P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++++
Sbjct: 70 SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVL 129
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKD----NIITTRLLVPSSEIGCLEGRDGS 452
IS +E + L PA +A++ + R+ L ++D + + RLLV S++ L G+ GS
Sbjct: 130 ISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 189
Query: 453 L-SEMRRSTGANIQILS 468
L ++ STGA++++LS
Sbjct: 190 LIKSIQESTGASVRVLS 206
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD 121
SN+ S+ K P +R++ +K G +IG+ G +IK + + T A I V + G
Sbjct: 64 SNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 123
Query: 122 EERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVG 181
+R++ IS + SPA +A+ + R+ G E+E
Sbjct: 124 PDRVVLISGKEELESP-----LSPAMDAVIRVFKRV------SGLSENEDE--------- 163
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
+ + R++V+ L+GK G +I+ ++ T +R+L
Sbjct: 164 -----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 205
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG-SDEQIITISSEEGPDDEL 407
VFR++ DKVG +IG + L E ++V DP DG + +QI+ IS+ E EL
Sbjct: 88 VFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAEL 147
Query: 408 FPAQEALLHIQTRI---------VDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMR 457
PA +A + I + V A I + RLLVP + L G+ G + ++
Sbjct: 148 APAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+TG+ I+I+ ++++ + +V+I+G A +AL V LR +L
Sbjct: 208 ETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFL 257
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE---ERII 126
P+ P + +R++ K GG+IG+ G I+ + + T A + V L P D ++I+
Sbjct: 78 PRWPGFPGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRV--LDPADGVAGQQIV 135
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
IS T E +PA +A I + E +G F
Sbjct: 136 LISATEETQAE-----LAPAMDAAIKIFKHVNEIEGINASVT----------------FS 174
Query: 187 GGGNRVAT-RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIV 245
+ + R++V + L+GK G +I+ ++ T + IRI+ +D L + E IV
Sbjct: 175 ASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQETTGSTIRIIDKDDLL-NYRMVDERIV 233
Query: 246 QVVGDINNVKNAVAIISSRLRE 267
+++G NA+ + LR+
Sbjct: 234 EILGASLKALNALKSVLGLLRK 255
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 172/421 (40%), Gaps = 63/421 (14%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 124 RILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR---KDNVGSLEKAITIYGNPENCTN 180
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ E +++ + GE + +++
Sbjct: 181 ACKKILE--------VMQQEANNTNKGE----------------------ITLKILAHNN 210
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T T+I + S+ S + E I+ V G I+N+ A ++
Sbjct: 211 LIGRIIGKGGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGSIDNMSKAESM 266
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
ISS+LR+S D + FP + M+ S G GS
Sbjct: 267 ISSKLRQSYENDLQA----MAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGS------- 315
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
GP P Y + P V ++ F + P + VG +IG + + G
Sbjct: 316 GPAPYPYQ---SSLPTQQGVPASDTQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGAS 371
Query: 381 LKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
+K+A P + E+ +TI G + + AQ + + +D +T
Sbjct: 372 VKIAPLEQDKPAEQQTERKVTIV---GSPESQWKAQYLIFEKMREEGYVAGTEDVRLTIE 428
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
+LVPS+++G + G+ G ++ E++R TG+ I++ ++ P + V I+G + +
Sbjct: 429 ILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAE-EETTVHIIGPFFSVQS 487
Query: 495 A 495
A
Sbjct: 488 A 488
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 26/213 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIE--------- 127
T +IL H+ G +IGK G+ IK I Q T I V +++ + ERII
Sbjct: 202 TLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGSIDNMS 261
Query: 128 -----ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG--- 179
IS R+ E + + +P +H + S G G+ YG G
Sbjct: 262 KAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYP 321
Query: 180 -----VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
G + T + + VG ++G G I + + ++I P +
Sbjct: 322 YQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDK 381
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
P +E V +VG + A +I ++RE
Sbjct: 382 P-AEQQTERKVTIVGSPESQWKAQYLIFEKMRE 413
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG +IGK GS I + +GA I + HE PG +RII +S
Sbjct: 49 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL---- 104
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
F +A+ L+ +++L GEE E R R
Sbjct: 105 -------FDEVVKAMELVLEKLLSE-------GEESNEAEA--------------RPKFR 136
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I+ ++ I+I P+D++ V + + +V + G +N+
Sbjct: 137 LVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNNF---VGLHDRLVTITGPLNSQM 193
Query: 256 NAVAIISSRLRESQH 270
A+ +I S+L E H
Sbjct: 194 RAIHLILSKLSEDVH 208
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 38/303 (12%)
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVD-LGADKDNI-------ITTRLLVPSSEIGCLEG 448
+S++E PD L PA + LL + RI+D L D + ++TRLLVP+S+ G L G
Sbjct: 2 VSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 449 RDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ G ++ ++ ++ +++L E++P D +V+++GE A+ + ++LR +L
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKFL 121
Query: 508 --------YRDFFQKETPPSSTGPTGSALVVEAASPIDIT--PAREVQTVTDPPAATHQS 557
+ Q PP P + + P++ P P H +
Sbjct: 122 VDRSIIPLFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQYMQPPRQHDN 181
Query: 558 VQIPATSQPS--KEAAGSVSETVKQ-----NESERREDVPTVINRVPLPLVTRSTLEVVL 610
P+ P K+ +S +Q + S + P++I ++ T ++ +
Sbjct: 182 YYPPSDMPPPMEKQPHQGISAYGRQTPMGGHASSNAQAAPSMITQI--------TQQMQI 233
Query: 611 PDYAVPKLITKSKTLLTRFSEMSGASVSLVE--GQPEGTQKIIQISGTPEQVERAQSVLQ 668
P +I + ++ SGA+V++ E G PE ++ISGT QV+ AQ ++Q
Sbjct: 234 PLSYADAVIGTAGASISYIRRASGATVTIQETRGVPEAM--TVEISGTASQVQTAQQLIQ 291
Query: 669 GFI 671
Sbjct: 292 AIF 294
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ + +P+ +P PA + L +H RI++ G G+ G
Sbjct: 3 SAKEEPDSSLP---PAMDGLLRVHKRIID-----GLEGDSSH-----------APPSSGA 43
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+V+TR++V G L+GK G ++ ++ + +R+L + LP + +V+V+G+
Sbjct: 44 KVSTRLLVPASQAGSLIGKQGGTVKSIQEASACIVRVLGAE-DLPVFSLQDDRVVEVLGE 102
Query: 251 INNVKNAVAIISSRLRE 267
V AV +I+S+LR+
Sbjct: 103 AVGVHKAVELIASQLRK 119
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELF 408
VFR++ DKVG +IG +++ L ++V DP DG +I+ IS+ E EL
Sbjct: 95 VFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELA 154
Query: 409 PAQEALLHIQTRIVDL-GADKD--------NIITTRLLVPSSEIGCLEGRDG-SLSEMRR 458
PA +A + I + D+ G + D I + RLLVP ++ L G+ G ++ M+
Sbjct: 155 PAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQE 214
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
STG I+I+ ++E+ + + +V+I G +AL V LR +L
Sbjct: 215 STGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFL 263
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
N+ + +A P P + +R++ K GG+IG+ G +IK + + T A +
Sbjct: 72 NSAFEVAEEGKKATPWPGFPG---ASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVR 128
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
V + G RI+ IS T E +PA +A I + + +G +
Sbjct: 129 VLDPTDGVSSRIVLISATEETQAE-----LAPAMDAAVRIFKHVNDIEGINPDFTLPV-- 181
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHS 233
G + R++V + L+GK G I+ M+ T T IRI+ +D
Sbjct: 182 -------------SGPEICSARLLVPKAQGRHLIGKQGTTIQLMQESTGTTIRIIDKDEL 228
Query: 234 LPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
L + + E IV++ G V NA+ + LR
Sbjct: 229 LSNQM-VEERIVEIRGASLKVLNALKSVLGLLR 260
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 136/335 (40%), Gaps = 56/335 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 66 ----------TAIFKAFSMIIDK-LEEDISSSMTNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G ++
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGTAHS 154
Query: 254 VKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGA 308
+ V I + ES + R G SP F Y + +P A
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIPQPDSSSA 211
Query: 309 RFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED-----LVFRMLCPIDKVGRVI 363
S + + +++ G PM+ Q F G D M P D +G +I
Sbjct: 212 AISPQLSKLHQL-------AMQQGPFPMATCNQGFTGMDASAQACSHEMTIPNDLIGCII 264
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K+A+PVDGS ++ +TI+
Sbjct: 265 GRQGAKISEIRQMSGAQIKIANPVDGSTDRQVTIT 299
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 144/340 (42%), Gaps = 59/340 (17%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAG----TAHSIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQN 581
P+GS ++ A VQ H A QP +A + K +
Sbjct: 181 KPSGSPVIFAGGQ------AYAVQ-------GQH------AIPQPDSSSAAISPQLSKLH 221
Query: 582 ESERREDVPTVINRVPLPLVT-------------RSTLEVVLPDYAVPKLITKSKTLLTR 628
+ ++ P P+ T + E+ +P+ + +I + ++
Sbjct: 222 QLAMQQG--------PFPMATCNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKISE 273
Query: 629 FSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQ 668
+MSGA + + T + + I+G+P + A+ +++
Sbjct: 274 IRQMSGAQIKIANPVDGSTDRQVTITGSPASIGLAEYLIK 313
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 65/422 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 191 RILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR---KDNLGSLEKAITIYGNPEN--- 244
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ ++ L ++H ++ G + +++
Sbjct: 245 CTNACKKILEVMHQEASNTNKG---------------------------EITLKILAHNN 277
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T T+I + S+ S + E I+ V G I N+ A A+
Sbjct: 278 LIGRIIGKGGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGSIENMSKAEAM 333
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN- 319
IS++LR+S D P P ++ A M G N R
Sbjct: 334 ISNKLRQSYENDLQAMA----------PQSMMFPGLHPMA----MMSTASMGYNSRGPAL 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
YG P+ Y ++ P V ++ F + P + VG +IG + + G
Sbjct: 380 YGTGPAPYPYQSNLTP-QQGVLTSDAQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGA 437
Query: 380 DLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITT 434
+K+A P + E+ +TI G + + AQ + + +D +T
Sbjct: 438 SVKIAPLESDKPAEQQTERKVTIV---GSPESQWKAQYLIFEKMREEGFVSGTEDVRLTV 494
Query: 435 RLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
+LVPS+++G + G+ G ++ E++R TG+ I++ ++ P + + V I+G + +
Sbjct: 495 EILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPP-TADEETTVHIIGPFFSVQ 553
Query: 494 DA 495
A
Sbjct: 554 SA 555
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 180/424 (42%), Gaps = 53/424 (12%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q + A ++VH D +E + T +P+
Sbjct: 146 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHR---KDNVGSLEKAITIYGNPD---- 198
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ + A + + + + + G G +++G + +++
Sbjct: 199 NCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSY----------EITLKILAHNN 248
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T T+I + S+ S + E I+ V G I N+ A ++
Sbjct: 249 LIGRIIGKGGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGTIENMSKAESM 304
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
ISS+LR+S D + FP + M+ S G GS
Sbjct: 305 ISSKLRQSYENDLQA----MAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGS------- 353
Query: 321 GPRPSGY--SIEA-GAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
GP P Y S++ P SD+ + + + P + VG +IG + +
Sbjct: 354 GPAPYPYQSSLQTQQGVPASDTQETTF-------LYIPNNSVGAIIGTKGSHIRNIIRFS 406
Query: 378 GVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII 432
G +K+A P + E+ +TI G + + AQ + + +D +
Sbjct: 407 GASVKIAPLEQDKPAEQQTERKVTIV---GSPESQWKAQYLIFEKMREEGYVSGTEDVRL 463
Query: 433 TTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQA 491
T +LVPS+++G + G+ G ++ E++R TG+ I++ ++ P + V I+G +
Sbjct: 464 TIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAD-EETTVHIIGPFFS 522
Query: 492 ARDA 495
+ A
Sbjct: 523 VQSA 526
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 96/258 (37%), Gaps = 34/258 (13%)
Query: 43 GNNNNNTN------NIMNNNTSINNSNNRANSNPKDPSLMVT--TTYRILCHDMKAGGVI 94
GN +N TN +M + N SN D + + T +IL H+ G +I
Sbjct: 195 GNPDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRII 254
Query: 95 GKSGSIIKSIRQHTGAWINV---HELIPGDEERIIE--------------ISDTRRRDPE 137
GK G+ IK I Q T I V +++ + ERII IS R+ E
Sbjct: 255 GKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYE 314
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG--------VGGGGFRGGG 189
+ + +P +H + S G G+ YG G G
Sbjct: 315 NDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLQTQQGVPASD 374
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
+ T + + VG ++G G I + + ++I P + P +E V +VG
Sbjct: 375 TQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKP-AEQQTERKVTIVG 433
Query: 250 DINNVKNAVAIISSRLRE 267
+ A +I ++RE
Sbjct: 434 SPESQWKAQYLIFEKMRE 451
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 172/421 (40%), Gaps = 63/421 (14%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ G+ I+ I Q T A ++VH D +E + T +PE
Sbjct: 115 RILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHR---KDNVGSLEKAITIYGNPENCTN 171
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ E +++ + GE + +++
Sbjct: 172 ACKKILE--------VMQQEANNTNKGE----------------------ITLKILAHNN 201
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T T+I + S+ S + E I+ V G I+N+ A ++
Sbjct: 202 LIGRIIGKGGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGSIDNMSKAESM 257
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
ISS+LR+S D + FP + M+ S G GS
Sbjct: 258 ISSKLRQSYENDLQA----MAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGS------- 306
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
GP P Y + P V ++ F + P + VG +IG + + G
Sbjct: 307 GPAPYPYQ---SSLPTQQGVPASDTQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGAS 362
Query: 381 LKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
+K+A P + E+ +TI G + + AQ + + +D +T
Sbjct: 363 VKIAPLEQDKPAEQQTERKVTIV---GSPESQWKAQYLIFEKMREEGYVAGTEDVRLTIE 419
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
+LVPS+++G + G+ G ++ E++R TG+ I++ ++ P + V I+G + +
Sbjct: 420 ILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAE-EETTVHIIGPFFSVQS 478
Query: 495 A 495
A
Sbjct: 479 A 479
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 26/213 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIE--------- 127
T +IL H+ G +IGK G+ IK I Q T I V +++ + ERII
Sbjct: 193 TLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGSIDNMS 252
Query: 128 -----ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG--- 179
IS R+ E + + +P +H + S G G+ YG G
Sbjct: 253 KAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYP 312
Query: 180 -----VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
G + T + + VG ++G G I + + ++I P +
Sbjct: 313 YQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDK 372
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
P +E V +VG + A +I ++RE
Sbjct: 373 P-AEQQTERKVTIVGSPESQWKAQYLIFEKMRE 404
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+S P + VFRML P KVG +IG V L E +++ + EQ + I
Sbjct: 45 ESKYPGWPGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVII 104
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLEGRDGSL- 453
E D+ L PA +ALL + + ++ L DN+I R+L PS + L G G +
Sbjct: 105 FGREQLDEPLPPAMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMI 164
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ + ++ +I++L +++P D +++I G AL V + LR YL
Sbjct: 165 NSIMEASQTDIRVLD-DDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYL 217
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 37/239 (15%)
Query: 35 PNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNP---KDPSLMVTTTYRILCHDMKAG 91
P H +N ++ +T + + S+ K P TT +R+L K G
Sbjct: 8 PKGQEVHEVTRKSNDQIVLKQDTVDDEDSGDTTSSAGESKYPGWPGTTVFRMLIPAQKVG 67
Query: 92 GVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQE 148
+IG G ++ + + T A + + H + E+ +I + +P PA +
Sbjct: 68 AIIGHKGERVRRLCEETRACVRIIGGH--LCAAEQAVIIFGREQLDEP------LPPAMD 119
Query: 149 ALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLG 208
AL ++ + + +D G N + R++ L+G
Sbjct: 120 ALLRVYQQTINNDSLD---------------------VGPDNVIVRRILAPSEQAASLIG 158
Query: 209 KGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ G +I + ++T IR+L D LP + ++++ G V A+ +++S LR+
Sbjct: 159 EHGVMINSIMEASQTDIRVL--DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRK 215
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 52/329 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 42 TLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTG--------- 92
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + +A L+ D +++ G +G GG G N R+++S
Sbjct: 93 --ALTGISDAYGLVADSLVK----------------GVPQMGMGGVVGNPNTHPIRLLIS 134
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G V+ AV
Sbjct: 135 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGVQKAVW 189
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT--------ARRPSMDGARFS 311
I L + + R + L+SP P +N T + + +GA F+
Sbjct: 190 EIGKCLIDDEQRG---YGTVLYSPAVRVQGGAPAPPLNGTGASYGAPRSYNRTGNGADFT 246
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGESEGIV 370
G S +Y PR +G S + G P +P GED+ + + P D VG +IG +
Sbjct: 247 GGQSPS-SYPPRRNGPS-DGGPPP-----RPEDGEDIQTQNISIPADMVGCIIGRGGSKI 299
Query: 371 ELLQNEIGVDLKVAD-PVDGSDEQIITIS 398
++ G + +A P D + E++ TI+
Sbjct: 300 SEIRKSSGARISIAKAPHDETGERMFTIT 328
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 25/141 (17%)
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
+GRVIG ++ ++ G ++V D DE +IT++S E DD A EA+L ++
Sbjct: 616 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLR 675
Query: 419 TRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSG 478
+I D + D+I+T RLL T A+++I S+ E P C
Sbjct: 676 AKIND---EDDDIVTIRLL---------------------RTRADVRI-SKSERPKCADA 710
Query: 479 TDELVQIVGEIQAARDALVEV 499
DEL+++VGEI + RDALV++
Sbjct: 711 NDELIEVVGEIGSVRDALVQI 731
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 148/339 (43%), Gaps = 56/339 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++ G
Sbjct: 19 TLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVT--------GP 70
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S EA L+ D +++ G +G GG N R+++S
Sbjct: 71 LTGIS---EAYGLVADGLVK----------------GAPQMGMGGVVANPNTHPIRLLIS 111
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV++ G + V+ AV
Sbjct: 112 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEIQGTPDGVQKAVW 166
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP------SMDGARFSGS 313
I L + Q R + L+SP P MN T + +GA F+GS
Sbjct: 167 EIGKCLIDDQERG---YGTVLYSPAVRVQGAAPTPAMNGTGYGAPRGYNRTGNGADFTGS 223
Query: 314 N--YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML-CPIDKVGRVIGESEGIV 370
Y+ + GP + G P + GED+ + + P D VG +IG +
Sbjct: 224 GAPYQRRSTGPS------DTGPPPAVED-----GEDIQTQNISIPADMVGCIIGRGGSKI 272
Query: 371 ELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELF 408
++ G + +A P D + E++ TI+ + +++
Sbjct: 273 SEIRKSSGARISIAKAPHDDTGERMFTITGGQTANEKAL 311
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 84/347 (24%)
Query: 65 RANSNPKDPS--LMVTTTY-RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELI 118
+ +S P+ P+ M +TY R L + AG VIGK GS I + +GA I + HE
Sbjct: 17 KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 76
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
PG +RII IS +A+ LI ++L + E+ +E
Sbjct: 77 PGTSDRIIMISGATNE-----------IIKAMELILAKLLSE-----MHTEDGDE----- 115
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
R R++V G ++GKGG I+ +++ I+I P+D++ +
Sbjct: 116 ---------ADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNY---L 163
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNN 298
+++ +V ++G + A+ +I S+L E H Y MN
Sbjct: 164 GLTDRLVTLMGSLEEQMRAIDLILSKLTEDPH---------------------YTQFMN- 201
Query: 299 TARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPID 357
A FS + Y S NYGP +G + S+SV + +
Sbjct: 202 ---------APFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGVAD----------E 242
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVD---GSDEQIITISSEE 401
+G V+G + + G +K++D D G+ ++ +TI+ +
Sbjct: 243 HIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQ 289
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA---DPVDGS 390
+P SD F + R L G VIG+ + Q++ G ++++ + G+
Sbjct: 24 SPTSD----FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGT 79
Query: 391 DEQIITISSEEGPDDELFPAQEALLH--IQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
++II IS G +E+ A E +L + + G + D RL+VP+S G + G
Sbjct: 80 SDRIIMIS---GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 136
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ GS + + A+I+I ++ + TD LV ++G ++ A+ + ++L
Sbjct: 137 KGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKL 190
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL-IPGDEERIIEISDTRRRDPEG 138
+ RILC G VIGKSG+ ++ + Q TGA I V E+ ER+I +S E
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSN-----EI 267
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
SP EAL L+HD++L E + +GGG G++ + R++
Sbjct: 268 PTEPISPTIEALILLHDKVL--------MAEVKRNHGGGMRCDELPVSENGDK-SIRILC 318
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRI--LPRDHSLPRCVSMS-------------EE 243
+ +G ++GK G + ++ +T +I++ + +D S R + +S E
Sbjct: 319 ASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEA 378
Query: 244 IV----QVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDD 291
++ +V G + A+ I+SRLR RD S ++P F P DD
Sbjct: 379 LILLHDKVAGPPAIARGALTEIASRLRTRTLRDTSTA----NNPPPFAPSDD 426
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 37/209 (17%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDD 405
D R+LC + +G VIG+S V ++ + G +KV + D S E++I +SS E P +
Sbjct: 211 DKSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTE 270
Query: 406 ELFPAQEALLHIQTRIV---------------DLGADKDNIITTRLLVPSSEIGCLEGRD 450
+ P EAL+ + +++ +L ++ + R+L S IG + G+
Sbjct: 271 PISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCASELIGSVIGKS 330
Query: 451 GS-LSEMRRSTGANIQ--------------ILSREEVPA-CVSGTDELV-----QIVGEI 489
G+ + + + TGA I+ I+S E+P +S T E + ++ G
Sbjct: 331 GANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVAGPP 390
Query: 490 QAARDALVEVTTRLRSYLYRDFFQKETPP 518
AR AL E+ +RLR+ RD PP
Sbjct: 391 AIARGALTEIASRLRTRTLRDTSTANNPP 419
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 141/355 (39%), Gaps = 65/355 (18%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D L VT T R+L H + G +IGK G +K IR+ + A +N+ E ERII I+ +
Sbjct: 20 DGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITGS 77
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+++F I Y EE+ + G
Sbjct: 78 T---------------DSVFRAFTMIT--------YKLEEDLTA----LVANGTISSKPP 110
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V R+V+ G L+GKGG I+++R T QI++ LP +E V + G+
Sbjct: 111 VTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNS---TERGVTISGNQ 165
Query: 252 NNVKNAVAIISSRLRES-------QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
++V V +I + + ES +R L + ++ F D+ PH + +
Sbjct: 166 DSVIQCVKLICTVILESPPKGATIPYRPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGG 225
Query: 305 MDGARFSGSNYRSNNYG------PRPSGYSIEAGAAPMSDSVQPFYGEDLVFR------- 351
+D + N YG + S++ G +P++ L+
Sbjct: 226 LD---LQQAYALQNQYGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMD 282
Query: 352 --------MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+L P D +G +IG + ++ G +K+ +DG+ ++ +TI+
Sbjct: 283 STSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 337
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 162/342 (47%), Gaps = 34/342 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G L R+L +VG +IG+ V+ ++ E + +++ E+IITI+ G
Sbjct: 24 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITIT---GST 78
Query: 405 DELFPAQEALLH-IQTRIVDLGAD----KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
D +F A + + ++ + L A+ +T RL++P+S+ G L G+ G+ + E+R
Sbjct: 79 DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 138
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPP 518
STGA IQ+ + + +P + T+ V I G +D++++ + + + + T P
Sbjct: 139 STGAQIQV-AGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILESPPKGATIP 190
Query: 519 SSTGPTGSALVV---EAASPIDITPAREVQTVTDPPAATHQSVQIP-ATSQPSKEAAGSV 574
P+ +AL++ + D P + +VT Q+ + P E A
Sbjct: 191 YRPTPSPAALLIAGNQVFEASDFAP-HPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLH 249
Query: 575 SETVKQNESERREDVPTVI-NRVPLPLV-------TRSTLEVVLPDYAVPKLITKSKTLL 626
+V+Q S + T++ ++ L + ++++ E+++P+ + +I + T +
Sbjct: 250 QLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQGTKI 309
Query: 627 TRFSEMSGASVSLVEGQPEGTQ-KIIQISGTPEQVERAQSVL 667
++SGA + + Q +GT + + I+GTP + AQ ++
Sbjct: 310 NEIRQVSGAQIK-IGSQLDGTSDRHVTITGTPVSINLAQYLI 350
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 143/347 (41%), Gaps = 84/347 (24%)
Query: 65 RANSNPKDPS--LMVTTTY-RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELI 118
+ +S P+ P+ M +TY R L + AG VIGK GS I + +GA I + HE
Sbjct: 65 KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 124
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
PG +RII IS + + +A+ LI ++L + E+ +E
Sbjct: 125 PGTSDRIIMISG-----------ATNEIIKAMELILAKLLSE-----MHTEDGDE----- 163
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
R R++V G ++GKGG I+ +++ I+I P+D++ +
Sbjct: 164 ---------ADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNY---L 211
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNN 298
+++ +V ++G + A+ +I S+L E H Y MN
Sbjct: 212 GLTDRLVTLMGSLEEQMRAIDLILSKLTEDPH---------------------YTQFMN- 249
Query: 299 TARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPID 357
A FS + Y S NYGP +G + S+SV + +
Sbjct: 250 ---------APFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGVAD----------E 290
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVD---GSDEQIITISSEE 401
+G V+G + + G +K++D D G+ ++ +TI+ +
Sbjct: 291 HIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQ 337
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA---DPVDGS 390
+P SD F + R L G VIG+ + Q++ G ++++ + G+
Sbjct: 72 SPTSD----FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGT 127
Query: 391 DEQIITISSEEGPDDELFPAQEALLH--IQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
++II IS G +E+ A E +L + + G + D RL+VP+S G + G
Sbjct: 128 SDRIIMIS---GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 184
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ GS + + A+I+I ++ + TD LV ++G ++ A+ + ++L
Sbjct: 185 KGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKL 238
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 71/448 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q + A ++VH D +E + T +PE
Sbjct: 150 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHR---KDNVGSLEKAITIYGNPEN--- 203
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
A I D +++ + GE + +++
Sbjct: 204 ----CTNACKKILD-VMQQEAASTNKGE----------------------ITLKILAHNN 236
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T ++I + S+ S + E I+ V G I N+ A ++
Sbjct: 237 LIGRIIGKGGNTIKRIMQDTDSKITV----SSINDINSFNLERIITVKGTIENMSKAESM 292
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
ISS+LR+S D + FP + M+ S G GS
Sbjct: 293 ISSKLRQSYENDLQA----MAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGS------- 341
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
GP P Y + P V ++ F + P + VG +IG + + G
Sbjct: 342 GPAPYPYQ---SSLPTQQGVPASDTQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGAS 397
Query: 381 LKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
+K+A P + E+ +TI G + + AQ + + +D +T
Sbjct: 398 VKIAPLEQDKPAEQQTERKVTII---GSPESQWKAQYLIFEKMREEGYVAGTEDVRLTIE 454
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
+LVPS+++G + G+ G ++ E++R TG+ I++ ++ P + V I+G + +
Sbjct: 455 ILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAE-EETTVHIIGPFFSVQS 513
Query: 495 ALVEVTTRLRSYLYRDFFQKETPPSSTG 522
A R+R+ + Q TP ++G
Sbjct: 514 A----QRRIRAMV----LQSGTPGGTSG 533
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 26/213 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIE--------- 127
T +IL H+ G +IGK G+ IK I Q T + I V +++ + ERII
Sbjct: 228 TLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERIITVKGTIENMS 287
Query: 128 -----ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG--- 179
IS R+ E + + +P +H + S G G+ YG G
Sbjct: 288 KAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYP 347
Query: 180 -----VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL 234
G + T + + VG ++G G I + + ++I P +
Sbjct: 348 YQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDK 407
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
P +E V ++G + A +I ++RE
Sbjct: 408 P-AEQQTERKVTIIGSPESQWKAQYLIFEKMRE 439
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+S P + VFRML P KVG +IG V L E +++ + EQ + I
Sbjct: 45 ESKYPGWPGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVII 104
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLEGRDGSL- 453
E P++ L PA +ALL + + ++ L D +I R+LVPS + L G G +
Sbjct: 105 FGREQPEEPLPPAMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMI 164
Query: 454 SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ + ++ +I++L ++P D +V+I G AL V + LR YL
Sbjct: 165 NSIMEASQTDIRVLD-GDLPPVALEEDRVVEIWGLPARVHKALELVASHLRKYL 217
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV--HELIPGDEERIIEI 128
K P T+ +R+L K G +IG G ++ + + T A + + L ++ II
Sbjct: 47 KYPGWPGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVII-- 104
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
R PE +P PA +AL ++ + + + VG G
Sbjct: 105 --FGREQPEEPLP---PAMDALLRVYQQTINDE---------------SLDVGSDGV--- 141
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
+ R++V L+G+ G +I + ++T IR+L D LP + +V++
Sbjct: 142 ---IVRRILVPSEQAESLIGEHGVMINSIMEASQTDIRVL--DGDLPPVALEEDRVVEIW 196
Query: 249 GDINNVKNAVAIISSRLRE 267
G V A+ +++S LR+
Sbjct: 197 GLPARVHKALELVASHLRK 215
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG VIGK GS I + +GA I + HE PG +RII +S
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG----- 90
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+ + Q A+ LI ++L + E++ + + R
Sbjct: 91 ------AINEIQRAVELILSKLLSE-----LHSEDDND--------------AEPKTKVR 125
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG I +++ I+I P+D++ ++ +V + G +
Sbjct: 126 LVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNY---YGQNDRLVMLTGTFDEQM 182
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A+ +I S+L E H +S + P +F VP+ T PS+ ++ NY
Sbjct: 183 RAIELIVSKLAEDPHYAQS-MNSPFSYPGVYFSGYQGVPY---TYVLPSVAPPAYNAVNY 238
Query: 316 RSN 318
R N
Sbjct: 239 RPN 241
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
+IS + DP + SF+ R++ D +GE+ EE
Sbjct: 243 DISKAPKIDPTKEIASFTA----------RVIIMDYPEEVHGEDSEE------------- 279
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
N+V R++V +GC++GKGG+II+ +R E+ QIRIL DH LP C S E++Q
Sbjct: 280 --ANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDH-LPSCSLSSNELIQ 336
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHF 276
+ + V+ + I+SRL ++ R + F
Sbjct: 337 ISREPFIVRKILYQIASRLHDNPSRSQHLF 366
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 426 ADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQ 484
+++ N +T RLLVPS++IGC+ G+ G + + +R +GA I+IL + +P+C ++EL+Q
Sbjct: 277 SEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQ 336
Query: 485 IVGEIQAARDALVEVTTRL 503
I E R L ++ +RL
Sbjct: 337 ISREPFIVRKILYQIASRL 355
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 146/335 (43%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ +++E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLH 240
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ P+ ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 241 SSEEAQNLMGQPSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 297 IANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 145/361 (40%), Gaps = 95/361 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PD 289
+ I+Q V I V ++ S + + +R + + + + + P
Sbjct: 151 TPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Query: 290 DDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMS 337
D + ++ A + P+ G + S S+ + N +PSG
Sbjct: 206 PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGL---------- 255
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI
Sbjct: 256 DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 311
Query: 398 S 398
+
Sbjct: 312 T 312
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 176/422 (41%), Gaps = 65/422 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 190 RILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHR---KDNVGSLEKAITIYGNPENCTN 246
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ E +++ + GE + +++
Sbjct: 247 ACKKILE--------VMQQEANSINKGE----------------------ITLKILAHNN 276
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T T+I + S+ S + E I+ V G I N+ A ++
Sbjct: 277 LIGRIIGKGGTTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGTIENMSKAESM 332
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
ISS+LR+S D + FP + M+ S G GS
Sbjct: 333 ISSKLRQSYENDLQA----MAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGS------- 381
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
GP P Y + P V ++ F + P VG +IG + + G
Sbjct: 382 GPAPYPYQ---ASLPPQQGVPATDTQETAF-LYIPNSSVGAIIGTKGSHIRNIIRFSGAS 437
Query: 381 LKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-ITT 434
+K+A P + E+ +TI G + + AQ L+ + R A D++ +T
Sbjct: 438 VKIAPIEQDKPAEQQTERKVTIV---GSPESQWKAQ-YLIFEKMREEGFVAGTDDVRLTI 493
Query: 435 RLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
+LVPS+++G + G+ G ++ E++R TG+ I+ LS ++ + + + V I+G + +
Sbjct: 494 EILVPSAQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVHIIGPFFSVQ 552
Query: 494 DA 495
A
Sbjct: 553 SA 554
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDL----------GADKDN 430
++V D G+ ++I+ IS E P+ L PA +A++ + R+ L GA
Sbjct: 9 IRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVA 68
Query: 431 IITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
+ RLLV S++ L G+ GSL ++ STGA++++LS +EVP + + +V++ GE
Sbjct: 69 FCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEA 128
Query: 490 QAARDALVEVTTRLRSYL 507
+ AL V LR +L
Sbjct: 129 LKVQKALEAVVGHLRKFL 146
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 106 QHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRIL---ESDG 162
+ T A I V + G +RI+ IS R +PE + SPA +A+ + R+ ES+G
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLISG--REEPEAPL---SPAMDAVIRVFKRVTGLSESEG 57
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETK 222
G YG G F + R++V+ L+GK G +I+ ++ T
Sbjct: 58 DGKAYG-----------AAGVAF------CSIRLLVASTQAINLIGKQGSLIKSIQESTG 100
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+R+L D +P + E IV++ G+ V+ A+ + LR+
Sbjct: 101 ASVRVLSGDE-VPFYAAADERIVELQGEALKVQKALEAVVGHLRK 144
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+ R+L +A +IGK GS+IKSI++ TGA + V + GDE +D R + +G
Sbjct: 71 SIRLLVASTQAINLIGKQGSLIKSIQESTGASVRV---LSGDEVPFYAAADERIVELQGE 127
Query: 140 MPSFSPAQEAL------FLIHDRIL 158
A EA+ FL+ +L
Sbjct: 128 ALKVQKALEAVVGHLRKFLVDHSVL 152
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 171/427 (40%), Gaps = 74/427 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 82 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN- 135
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + L ++ L ++ G + +++
Sbjct: 136 --CTNACKRILEVMQQEALSTNKG---------------------------EICLKILAH 166
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 167 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 222
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 223 NQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVFN 266
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 267 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRF 325
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 326 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVR 382
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVGE 488
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGP 440
Query: 489 IQAARDA 495
+ + A
Sbjct: 441 FYSVQSA 447
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDE--ER 124
P P+ + TTY + ++ G +IG GS I+SI + + A + + L P D+ ER
Sbjct: 289 PVFPNDLQETTYLYIPNN-AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTER 347
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
+ I T PEG+ +A ++I +++ E G
Sbjct: 348 KVTIVGT----PEGQW-------KAQYMIFEKMREE-----------------------G 373
Query: 185 FRGGGN--RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
F G + R+ ++V+ VG ++GKGG+ + +++ T + I+ LP P E
Sbjct: 374 FMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEE 432
Query: 243 EIVQVVGDINNVKNA 257
V ++G +V++A
Sbjct: 433 TPVHIIGPFYSVQSA 447
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 141/345 (40%), Gaps = 55/345 (15%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D L VT T R+L H + G +IGK G +K IR+ + A +N+ E ERII I+ +
Sbjct: 9 DGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITITGS 66
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+++F I Y EE+ + G
Sbjct: 67 T---------------DSVFRAFTMIT--------YKLEEDLTA----LVANGTISSKPP 99
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V R+V+ G L+GKGG I+++R T QI++ LP +E V + G+
Sbjct: 100 VTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNS---TERGVTISGNQ 154
Query: 252 NNVKNAVAIISSRLRES-------QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
++V V +I + + ES +R L + ++ F ++ PH + +
Sbjct: 155 DSVIQCVKLICTVILESPPKGATIPYRPSPSPAALLIAGNQVFEASEFAPHPLYSVAQGG 214
Query: 305 MDGARFSGSNYRSNNYG------PRPSGYSIEAGAAPMSDSVQPFY-GED----LVFRML 353
+D + N YG + S++ G +P++ G D +L
Sbjct: 215 LD---LQQAYTLQNQYGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELL 271
Query: 354 CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+ +DG+ ++ +TI+
Sbjct: 272 IPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 316
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 157/340 (46%), Gaps = 40/340 (11%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G L R+L +VG +IG+ V+ ++ E + +++ E+IITI+ G
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITIT---GST 67
Query: 405 DELFPAQEALLH-IQTRIVDLGAD----KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
D +F A + + ++ + L A+ +T RL++P+S+ G L G+ G+ + E+R
Sbjct: 68 DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 127
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPP 518
STGA IQ+ + + +P + T+ V I G +D++++ + + + + T P
Sbjct: 128 STGAQIQV-AGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILESPPKGATIP 179
Query: 519 SSTGPTGSALVVEA-----ASPIDITPAREVQTVTDPPAATHQSVQIPATSQ-----PSK 568
P+ +AL++ AS P V A +Q T Q P
Sbjct: 180 YRPSPSPAALLIAGNQVFEASEFAPHPLYSV-------AQGGLDLQQAYTLQNQYGIPHS 232
Query: 569 EAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTR 628
E A +V+Q S + VI + ++++ E+++P+ + +I + T +
Sbjct: 233 ELAKLHQLSVQQGLSPIAQPASAVIPG--MDSNSQTSQELLIPNDLIGSIIGRQGTKINE 290
Query: 629 FSEMSGASVSLVEGQPEGTQ-KIIQISGTPEQVERAQSVL 667
++SGA + + Q +GT + + I+GTP + AQ ++
Sbjct: 291 IRQVSGAQIK-IGSQLDGTSDRHVTITGTPVSINLAQYLI 329
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 171/427 (40%), Gaps = 74/427 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 82 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN- 135
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + L ++ L ++ G + +++
Sbjct: 136 --CTNACKRILEVMQQEALSTNKG---------------------------EICLKILAH 166
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 167 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 222
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 223 NQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVFN 266
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 267 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRF 325
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 326 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQFMIFEKMREEGFMCGTDDVR 382
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVGE 488
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGP 440
Query: 489 IQAARDA 495
+ + A
Sbjct: 441 FYSVQSA 447
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDE--ER 124
P P+ + TTY + ++ G +IG GS I+SI + + A + + L P D+ ER
Sbjct: 289 PVFPNDLQETTYLYIPNN-AVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTER 347
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
+ I T PEG+ +A F+I +++ E G
Sbjct: 348 KVTIVGT----PEGQW-------KAQFMIFEKMREE-----------------------G 373
Query: 185 FRGGGN--RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
F G + R+ ++V+ VG ++GKGG+ + +++ T + I+ LP P E
Sbjct: 374 FMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEE 432
Query: 243 EIVQVVGDINNVKNA 257
V ++G +V++A
Sbjct: 433 TPVHIIGPFYSVQSA 447
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 168/426 (39%), Gaps = 70/426 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSVEKSITIYGNPEN 141
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ + L ++ L ++ G + +++
Sbjct: 142 ---CTNACKRILEVMQQEALSTNKG---------------------------EICLKILA 171
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 172 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 227
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 228 ENQISTKLRQSYENDLQAMA----------PQSLMFPGLHPMAMMST------PGNGMVF 271
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS S P S V P + DL + P + VG +IG + +
Sbjct: 272 NTSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTFLYIPNNAVGAIIGTKGSHIRSIMR 330
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 331 FSNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 387
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
+T LLV SS++G + G+ G ++ E++R TG+ I++ P + V I+G
Sbjct: 388 RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPF 447
Query: 490 QAARDA 495
+ + A
Sbjct: 448 YSVQSA 453
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV--DGSDEQIITISSEEGPDDE 406
VFR++ P DKVG +IG ++ L +E ++V D DG+ +I+ +S+ E + E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 407 LFPAQEALLHIQTRIVD---------LGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEM 456
L PA A + I I + L A I + RLLVP ++ + G+ G ++ +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL----YRDFF 512
+ STG+ ++I+ +E+ + + + +V+I G +AL V LR +L F
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLF 278
Query: 513 QKETP----PSSTG-PTGSALV 529
+++ P P S G P GS +
Sbjct: 279 ERKNPEVAQPQSRGNPKGSRFL 300
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ER 124
++ P+ P + +R++ K GG+IG+ G IK + T A + V + GD R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
I+ +S + E SPA A I I E E+ G +
Sbjct: 146 IVLVSAREEVEAE-----LSPAMNAAIKIFKHI-----------NEIEDINSDGTL---- 185
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
+ R++V ++GK G I+ ++ T + +RI+ D L +M E I
Sbjct: 186 MAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHE-TMGERI 244
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
V++ G V NA+ ++ LR+ HG LH +R P+ + R +
Sbjct: 245 VEINGASLEVLNALKLVLGLLRKFLVD-----HGVLHLFERKNPE------VAQPQSRGN 293
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS-DSVQPFYGEDLVFR----MLCPIDKV 359
G+RF YG PS + AP S D QP + L+ + M P+ V
Sbjct: 294 PKGSRFL--------YGHDPSFH------APYSRDLSQP--ADSLITKITRTMQIPLADV 337
Query: 360 GRVIGESEGIVELLQNEIG 378
G +IG VEL+++ G
Sbjct: 338 GEIIGVRGENVELIRSVSG 356
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 27/337 (8%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
FR++ P VG +IG I++ + G + V G+ + I+ IS++E P L P
Sbjct: 29 FRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLSP 88
Query: 410 AQEALLHIQTRIVDL----------GADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
A EA++ + R+ L A + + + LV S+ + G++GS + +
Sbjct: 89 AMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVRAIEE 148
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPP 518
S+G + ILSR VP VS + +++I G++ A+ V LR YL
Sbjct: 149 SSGTTVGILSR--VPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLVDSSVIPAF-- 204
Query: 519 SSTGPTGSALVVEAASPIDITPARE--VQTVTDPPAATHQSVQIPATSQPSKEAAGSVSE 576
S TG + ++ S TPA + ++ P H++ ++ A PS ++ E
Sbjct: 205 SEKCKTGISQADQSLSLHHSTPAHQPGADSMYSLPLLGHEA-KVEAKI-PSSYSSLYAQE 262
Query: 577 TVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGAS 636
V RR D R P + T + +P A +I + + SG+
Sbjct: 263 PVLGGLPLRRSD------RAAAP--AQRTERIKIPFSAAKDIIGIAGETIDHIRRTSGSI 314
Query: 637 VSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ E + + I+++ GT Q++ AQ +++ + S
Sbjct: 315 ITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELLES 351
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P +R++ G +IG+ G IIK I + TGA I+V L G + I+ IS
Sbjct: 19 KWPGWPGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISA 78
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ P R+ SPA EA+ + R+ G Y + G G +
Sbjct: 79 --KEQPHLRL---SPAMEAVIEVFKRVT------GLY-----------PIDGNGMCSKAS 116
Query: 191 RV---ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
V + +V ++GK G + + + T + IL R +P VS E I+++
Sbjct: 117 EVKLSSVTFLVGYSQALSIIGKEGSRVRAIEESSGTTVGILSR---VPFYVSPDERIIKI 173
Query: 248 VGDINNVKNAVAIISSRLR 266
G + V A+ + LR
Sbjct: 174 QGQVLKVMAAMEAVLYHLR 192
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 46/350 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SG D ++Q V +I ++E + + YR
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGMPDAIIQCVKQICV---VMLESPPKGATIPYR------ 179
Query: 516 TPPSSTGPT----GSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSK 568
P ++ P G A ++ I D + T + +S Q+ S K
Sbjct: 180 -PKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLK 238
Query: 569 EAAGSVSETVK-----QNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSK 623
EAA E+++ +N +E E+ N ST E+ +P+ + +I +
Sbjct: 239 EAAWR-PESLRGKMELKNCNEESENWGMDANP------QASTHELTIPNDLIGCIIGRQG 291
Query: 624 TLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
T + +MSGA + + T++ I I+G+P + AQ ++ + S
Sbjct: 292 TKINEIRQMSGAQIKIANATEGSTERQITITGSPANISLAQYLINARLTS 341
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 140/354 (39%), Gaps = 71/354 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ D I ++ F EE+ V
Sbjct: 64 -------PT------------DAIFKAFAMIAFKFEEDINNSMTNSPA-----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGMPDAIIQ 157
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDY-------VPHMNNT 299
V I V ++ S + + R +P F Y +PH ++
Sbjct: 158 CVKQI-----CVVMLESPPKGATIPYRPK---PASAPVIFAGGQAYTIQGQCAIPHPDDA 209
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS----------DSVQPFYGEDL- 348
+ + + +RS PS EA P S + +G D
Sbjct: 210 CLLSAEYKTALTSTLWRSPQLA-HPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDAN 268
Query: 349 ----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 269 PQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITIT 322
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
INNS + + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 83 INNSMTNSPATSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS 129
+P ER + IS
Sbjct: 138 LPNSTERAVTIS 149
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 41/188 (21%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGR 139
L M+AG +IGK+GSI+KS+ +GA IN+ +L PG R++ +S
Sbjct: 31 FLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGL-------- 82
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
F+ +A+ LI +R++ + G++ + ++ +VV
Sbjct: 83 ---FNQLMDAMELILERLV-------YQGDQVID----------------SKATIALVVP 116
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ G L+GKGG ++ + + I+I P+D+S + + +V + G ++N A+
Sbjct: 117 SVCCGALIGKGGATLKAITQKASAGIKISPQDNSY----GLHDRLVTITGSLDNQLRAIF 172
Query: 260 IISSRLRE 267
+I S+L E
Sbjct: 173 LILSKLLE 180
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
GG + +VS M GC++GK G I++ M ++ +I I D P S +V V
Sbjct: 23 GGKKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTS---RVVLV 79
Query: 248 VGDINNVKNAVAIISSRL 265
G N + +A+ +I RL
Sbjct: 80 SGLFNQLMDAMELILERL 97
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 18/165 (10%)
Query: 112 INVHELIPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG 168
+ V+E +PG +ER++ I S+ R R + PA +ALF +HD ++ +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 169 EEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
+ +EY G V V RM+V +G L+GKGG II+ +R +T QIR+
Sbjct: 61 NDNDEYSEGQTV-----------VTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV- 108
Query: 229 PRDHSLPRC-VSMS-EEIVQVVGDINNVKNAVAIISSRLRESQHR 271
R+ +LP C +++S +E++Q++GD + V+ A+ ++ L + R
Sbjct: 109 -RNDNLPMCALALSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 381 LKVADPVDGSDEQIITISS--------EEGPDDELFPAQEALLHIQ-------------T 419
++V + + G DE+++TI S E+ +D + PA +AL +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 420 RIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSG 478
D ++ ++T R+LVPS +IG L G+ G + + +R T A I++ + +P C
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALA 119
Query: 479 T--DELVQIVGEIQAARDALVEVTTRL 503
DEL+QI+G+ A R+AL +V L
Sbjct: 120 LSHDELLQIIGDPSAVREALYQVAFLL 146
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLESPPKGATIPYRPK-PAS 216
Query: 516 TPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
TP G G A ++ I D+T ++ Q P Q + G
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNPAFPG 265
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
E++ + ++ P ST E+ +P+ + +I + T + +M
Sbjct: 266 EKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQM 321
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 322 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 138/364 (37%), Gaps = 102/364 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 182
Query: 242 --EEIVQVVGDINNV----KNAVAIISSRLRESQ--------------------HRDRSH 275
+ I+Q V I V A I R + + H D +
Sbjct: 183 TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTK 242
Query: 276 FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAA 334
H F P + T P+ G + S+ + N + SG
Sbjct: 243 LHQLAMQQTPF-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQSSGL------- 286
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 287 ---DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 339
Query: 395 ITIS 398
ITI+
Sbjct: 340 ITIT 343
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLESPPKGATIPYRPK-PAS 216
Query: 516 TPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
TP G G A ++ I D+T ++ Q P Q + G
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNPAFPG 265
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
E++ + ++ P ST E+ +P+ + +I + T + +M
Sbjct: 266 EKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQM 321
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 322 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 141/374 (37%), Gaps = 102/374 (27%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNV----KNAVAIISSRLRESQ---------------- 269
S R V++S + I+Q V I V A I R + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 232
Query: 270 ----HRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRP 324
H D + H F P + T P+ G + S+ + N +
Sbjct: 233 YAIPHPDLTKLHQLAMQQTPF-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQS 283
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
SG D+ P +L P D +G +IG + ++ G +K+A
Sbjct: 284 SGL----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 329
Query: 385 DPVDGSDEQIITIS 398
+ +GS E+ ITI+
Sbjct: 330 NATEGSSERQITIT 343
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 178/455 (39%), Gaps = 75/455 (16%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
N SI N N P P RIL G +IG+ GS I++I Q + A ++
Sbjct: 119 NQRRSIRNQRNPYPGMP-GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 177
Query: 114 VHELIPGDEERI--IEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEE 171
VH +E + +E S T +PE + + L ++ L ++ G
Sbjct: 178 VHR-----KENVGSLEKSITIYGNPEN---CTNACKRILEVMQQEALSTNKG-------- 221
Query: 172 EEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD 231
+ +++ +G ++GK G I+++ +T T+I +
Sbjct: 222 -------------------EICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV---- 258
Query: 232 HSLPRCVSMS-EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDD 290
S+ S + E I+ V G I N+ A IS++LR+S D P
Sbjct: 259 SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMA----------PQS 308
Query: 291 DYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL-- 348
P ++ A + G+ N P PS S P S V P + D+
Sbjct: 309 LMFPGLHPMAMMST------PGNGMVFNTSMPFPSCQSFAMSKTPAS-VVPPAFPNDMQE 361
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGP 403
+ P + VG +IG + + LK+A P+D E+ +TI G
Sbjct: 362 TTYLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIV---GT 418
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGA 462
+ + AQ + + D +T LLV SS++G + G+ G ++ E++R TG+
Sbjct: 419 PEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGS 478
Query: 463 NIQILSREEVPACVSGTDEL--VQIVGEIQAARDA 495
I++ P SG DE V I+G + + A
Sbjct: 479 VIKLPEHALAPP--SGGDEETPVHIIGPFYSVQSA 511
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 171/427 (40%), Gaps = 74/427 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 81 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN- 134
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + L ++ + ++ G + +++
Sbjct: 135 --CTNACKRILEVMQQEAISTNKG---------------------------EICLKILAH 165
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 166 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 221
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 222 NQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVFN 265
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 266 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRF 324
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 325 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVR 381
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVGE 488
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGL 439
Query: 489 IQAARDA 495
+ + A
Sbjct: 440 FYSVQSA 446
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLESPPKGATIPYRPK-PAS 216
Query: 516 TPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
TP G G A ++ I D+T ++ Q P Q + G
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNPAFPG 265
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
E++ + ++ P ST E+ +P+ + +I + T + +M
Sbjct: 266 EKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQM 321
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 322 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 141/374 (37%), Gaps = 102/374 (27%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNV----KNAVAIISSRLRESQ---------------- 269
S R V++S + I+Q V I V A I R + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 232
Query: 270 ----HRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRP 324
H D + H F P + T P+ G + S+ + N +
Sbjct: 233 YAIPHPDLTKLHQLAMQQTPF-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQS 283
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
SG D+ P +L P D +G +IG + ++ G +K+A
Sbjct: 284 SGL----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 329
Query: 385 DPVDGSDEQIITIS 398
+ +GS E+ ITI+
Sbjct: 330 NATEGSSERQITIT 343
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 179/434 (41%), Gaps = 79/434 (18%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRD 135
V R+L G +IGK G+ I++I + T + I+VH + G E+ I I T
Sbjct: 194 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST---- 249
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEG A +I + I++ + +E V +
Sbjct: 250 PEG-------CSAACKMILE-IMQKEAKDTKTADE---------------------VPLK 280
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNV 254
++ VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N
Sbjct: 281 ILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENC 336
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
A I ++RE+ D + + H +P +N A F S
Sbjct: 337 CKAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLNLAAV------GLFPAS- 379
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
SN P PS S GAAP S + P E + P VG +IG+ ++ L
Sbjct: 380 --SNAVPPPPSSVS---GAAPYSSFMPP---EQETVHVFIPAQAVGAIIGKKGQHIKQLS 431
Query: 375 NEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P S +++ I+ GP + F AQ + G ++ +
Sbjct: 432 RFASASIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLE 488
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA 492
T + VP+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 489 THIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYAS 545
Query: 493 -------RDALVEV 499
RD L +V
Sbjct: 546 QMAQRKIRDILAQV 559
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG VIGK G+ I + +GA I + +E PG +RII +S
Sbjct: 35 TYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSG----- 89
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+A+ LI ++L G+E E R+ R
Sbjct: 90 ------GIDDVLKAVELIIAKLLSEIPAED--GDEAEP-----------------RMRVR 124
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+VV G ++GKGG II+ E+ I+I P D + +++ +V V G +
Sbjct: 125 LVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLD---TKFFGLTDRLVTVTGTLEEQM 181
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+A+ +I S+L + H ++ H FF D + + P + A Y
Sbjct: 182 HAIDLILSKLTDDPHYSQT-MHAPFSYAGVFFSGFDGIQY---ACVLPYVATA-----AY 232
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGE-SEGIVELLQ 374
S N+GP + + +++SV + + +G V+G I+E+ Q
Sbjct: 233 NSMNHGPNGAAVKFQHNKDDITNSVTIGVAD----------EHIGLVVGRGGRNIMEISQ 282
Query: 375 NEIGVDLKVADPVD---GSDEQIITISSEE 401
G LK++D D G+ ++ ITI+ +
Sbjct: 283 TS-GARLKISDRGDFMSGTTDRKITITGSQ 311
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV--DGSDEQIITISSEEGPDDE 406
VFR++ P DKVG +IG ++ L +E ++V D DG+ +I+ +S+ E + E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 407 LFPAQEALLHIQTRIVD---------LGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEM 456
L PA A + I I + L A I + RLLVP ++ + G+ G ++ +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL----YRDFF 512
+ STG+ ++I+ +E+ + + + +V+I G +AL V LR +L F
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLF 278
Query: 513 QKETP 517
+++ P
Sbjct: 279 ERKNP 283
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 130/319 (40%), Gaps = 54/319 (16%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ER 124
++ P+ P + +R++ K GG+IG+ G IK + T A + V + GD R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
I+ +S + E SPA A I I E E+ G +
Sbjct: 146 IVLVSAREEVEAE-----LSPAMNAAIKIFKHI-----------NEIEDINSDGTL---- 185
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
+ R++V ++GK G I+ ++ T + +RI+ D L +M E I
Sbjct: 186 MAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHE-TMGERI 244
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
V++ G V NA+ ++ LR+ HG LH +R P+ V + P
Sbjct: 245 VEINGASLEVLNALKLVLGLLRKFLVD-----HGVLHLFERKNPE---VAQPQQSRGNPK 296
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS-DSVQPFYGEDLVFR----MLCPIDKV 359
G+RF YG PS + AP S D QP + L+ + M P+ V
Sbjct: 297 --GSRFL--------YGHDPSFH------APYSRDLSQP--ADSLITKITRTMQIPLADV 338
Query: 360 GRVIGESEGIVELLQNEIG 378
G +IG VEL+++ G
Sbjct: 339 GEIIGVRGENVELIRSVSG 357
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 103
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 163
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 164 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLESPPKGATIPYRPK-PAS 219
Query: 516 TPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
TP G G A ++ I D+T ++ Q P Q + G
Sbjct: 220 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNPAFPG 268
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
E++ + ++ P ST E+ +P+ + +I + T + +M
Sbjct: 269 EKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQM 324
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 325 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 365
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 138/364 (37%), Gaps = 102/364 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 45 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 98
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 99 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 127
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 128 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 185
Query: 242 --EEIVQVVGDINNV----KNAVAIISSRLRESQ--------------------HRDRSH 275
+ I+Q V I V A I R + + H D +
Sbjct: 186 TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTK 245
Query: 276 FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAA 334
H F P + T P+ G + S+ + N + SG
Sbjct: 246 LHQLAMQQTPF-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQSSGL------- 289
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 290 ---DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 342
Query: 395 ITIS 398
ITI+
Sbjct: 343 ITIT 346
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 123 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 175
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 176 STERAVTISGT 186
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 171/427 (40%), Gaps = 74/427 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 81 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN- 134
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + L ++ + ++ G + +++
Sbjct: 135 --CTNACKRILEVMQQEAISTNKG---------------------------EICLKILAH 165
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 166 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 221
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 222 NQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVFN 265
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 266 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRF 324
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 325 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVR 381
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVGE 488
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGL 439
Query: 489 IQAARDA 495
+ + A
Sbjct: 440 FYSVQSA 446
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLESPPKGATIPYRPK-PAS 216
Query: 516 TPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
TP G G A ++ I D+T ++ Q P Q + G
Sbjct: 217 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNPAFPG 265
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
E++ + ++ P ST E+ +P+ + +I + T + +M
Sbjct: 266 EKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQM 321
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
SGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 322 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 141/374 (37%), Gaps = 102/374 (27%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNV----KNAVAIISSRLRESQ---------------- 269
S R V++S + I+Q V I V A I R + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 232
Query: 270 ----HRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRP 324
H D + H F P + T P+ G + S+ + N +
Sbjct: 233 YAIPHPDLTKLHQLAMQQTPF-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQS 283
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
SG D+ P +L P D +G +IG + ++ G +K+A
Sbjct: 284 SGL----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIA 329
Query: 385 DPVDGSDEQIITIS 398
+ +GS E+ ITI+
Sbjct: 330 NATEGSSERQITIT 343
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 48/337 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R+ TG V +++PG +R++ ++
Sbjct: 43 TLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTG--------- 93
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + +A L+ D +++ G +G GG G N R+++S
Sbjct: 94 --ALTGIADAYGLVADSLVK----------------GAPQMGMGGVVGNPNTHPIRLLIS 135
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G + ++ AV
Sbjct: 136 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPDGIQKAVW 190
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG--SNYRS 317
I L + + R + L+SP P +N T P GA + S R+
Sbjct: 191 EIGKCLVDDEQRG---YGTVLYSPAVRVQGGG--PPLNGTG-APVGPGAGYGAPRSYNRT 244
Query: 318 NN----YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML-CPIDKVGRVIGESEGIVEL 372
N G P+ YS P+ + + GED+ + + P D VG +IG +
Sbjct: 245 GNGADFTGAAPAPYSPRRQEGPLPTTNED--GEDIQTQNISIPADMVGCIIGRGGSKISE 302
Query: 373 LQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELF 408
++ G + +A P D + E++ TI+ +++
Sbjct: 303 IRKSSGARISIAKAPHDETGERMFTITGGSAANEKAL 339
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 173/427 (40%), Gaps = 67/427 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 139 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPE-- 191
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + A + + + + S G E E + +++
Sbjct: 192 --NCTNACKRILEVMQQEAISTNKGELSPECSE-------------------ICLKILAH 230
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 231 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 286
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 287 NQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVFN 330
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 331 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRF 389
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 390 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVR 446
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVGE 488
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 447 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGL 504
Query: 489 IQAARDA 495
+ + A
Sbjct: 505 FYSVQSA 511
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 179/455 (39%), Gaps = 75/455 (16%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
N SI N N P P RIL G +IG+ GS I++I Q + A ++
Sbjct: 61 NQRRSIRNQRNPYPGMP-GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVD 119
Query: 114 VHELIPGDEERI--IEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEE 171
VH +E + +E S T +P+ + + L ++ L ++ G
Sbjct: 120 VHR-----KENVGSLEKSITIYGNPDN---CTNACKRILEVMQQEALSTNKG-------- 163
Query: 172 EEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD 231
+ +++ +G ++GK G I+++ +T T+I +
Sbjct: 164 -------------------EICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV---- 200
Query: 232 HSLPRCVSMS-EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDD 290
S+ S + E I+ V G I N+ A IS++LR+S D P
Sbjct: 201 SSINDINSYNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAIA----------PQS 250
Query: 291 DYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL-- 348
P ++ A + G+ N P PS S P S V P + D+
Sbjct: 251 LMFPGLHPMAMMST------PGNGMVFNTSMPFPSCQSFAMSKTPAS-VVPPAFPNDMQE 303
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGP 403
+ P + VG +IG + + LK+A P+D E+ +TI G
Sbjct: 304 TTYLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIV---GT 360
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGA 462
+ + AQ + + D +T LLV SS++G + G+ G ++ E++R TG+
Sbjct: 361 PEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGS 420
Query: 463 NIQILSREEVPACVSGTDE--LVQIVGEIQAARDA 495
I++ P SG DE V I+G+ + + A
Sbjct: 421 VIKLPEHALAPP--SGGDEETPVHIIGQFYSVQSA 453
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 150/360 (41%), Gaps = 39/360 (10%)
Query: 336 MSDSVQPFYGE-------------DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLK 382
+S QP +G L R+L +VG +IG+ V+ ++ E G +
Sbjct: 21 LSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 80
Query: 383 VADPVDGSDEQIITISSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLL 437
+++ E+I+TI+ GP D +F A + + I + + A +T RL+
Sbjct: 81 ISE--GNCPERIVTIT---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLV 135
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDAL 496
VP+S+ G L G+ GS + E+R STGA +Q+ + + +P + T+ V I G DA+
Sbjct: 136 VPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISG----TPDAI 187
Query: 497 VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREV---QTVTDPPAA 553
++ ++ + + T P P + ++ I + +T
Sbjct: 188 IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQL 247
Query: 554 THQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDY 613
Q P Q + G E++ + ++ P ST E+ +P+
Sbjct: 248 AMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPND 303
Query: 614 AVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 304 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 95/371 (25%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF 287
S R V++S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAY 227
Query: 288 --------PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGY 327
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
D+ P +L P D +G +IG + ++ G +K+A+
Sbjct: 288 ----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 333
Query: 388 DGSDEQIITIS 398
+GS E+ ITI+
Sbjct: 334 EGSSERQITIT 344
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 46/251 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T R L + AG VIGK GS I + +GA I + +E PG +RII +S
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSG----- 90
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+ + A+ LI ++L + E++ + + R
Sbjct: 91 ------AINEVLRAVELILSKLLSE-----LHSEDDNDVE--------------PKTKVR 125
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V G ++GKGG I E++ I+I P+D+S ++ IV V G ++
Sbjct: 126 LIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSY---YGQNDRIVTVTGTLDEQM 182
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNN---TARRPSMDGARFSG 312
+ +I S+L E H S + SP F YV T PS+ ++G
Sbjct: 183 RGIDLIVSKLAEDPHYSHS-----MSSP--FTYSGAYVSGYQGVPYTYVLPSVAPPAYNG 235
Query: 313 SNYRSNNYGPR 323
NYR N G +
Sbjct: 236 VNYRPNGTGAK 246
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 173/428 (40%), Gaps = 67/428 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPE- 198
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ + A + + + + S G E E + +++
Sbjct: 199 ---NCTNACKRILEVMQQEAISTNKGELSPECSE-------------------ICLKILA 236
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 237 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 292
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 293 ENQISTKLRQSYENDLQAMA----------PQSLMFPGLHPMAMMST------PGNGMVF 336
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS S P S V P + DL + P + VG +IG + +
Sbjct: 337 NTSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 395
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 396 FSNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 452
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVG 487
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 453 RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIG 510
Query: 488 EIQAARDA 495
+ + A
Sbjct: 511 LFYSVQSA 518
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 75/432 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK++ + T + +++H + G E+ I I T PEG
Sbjct: 275 RILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHAT----PEG-- 328
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ EA LI + I++ + EE + +++
Sbjct: 329 -----SSEACRLILE-IMQKEADETKSAEE---------------------IPLKILAHN 361
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G I NA
Sbjct: 362 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQD---LTIYNPERTITVKGSIEACSNAEVE 418
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA---------RRPSMDGARFS 311
I +LRE+ D + + + +P +N +A PS G +
Sbjct: 419 IMKKLREAYENDVVAVNQQA----------NLIPGLNLSALGIFSTGLSMLPSTAGPHGA 468
Query: 312 GSNYRSNNYG---PRPSGY--SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
+ N + P SG + GA P SV E V + P VG +IG+
Sbjct: 469 TAASPYNPFASHSPYLSGLYGASRVGAFPHQHSVP----EQEVVNLFIPTQAVGAIIGKK 524
Query: 367 EGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
++ L G +K+A P +G D E+++ I+ GP + F AQ +
Sbjct: 525 GQHIKQLARFAGASIKIA-PAEGPDASERMVIIT---GPPEAQFKAQGRIFGKLKEENFF 580
Query: 425 GADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELV 483
++ + + VPSS G + G+ G +++E++ T A + I+ R++ P + +V
Sbjct: 581 NPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIV 637
Query: 484 QIVGEIQAARDA 495
+I+G A++ A
Sbjct: 638 KIIGHFFASQTA 649
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 51/361 (14%)
Query: 323 RPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVD 380
R G+S E G P S S QP D R+L P VG +IG+ ++ L Q + VD
Sbjct: 249 RRGGHSREQGQYPGS-STQP-KPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVD 306
Query: 381 LKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPS 440
+ + +++ I ++ EG + A +L I + D + I ++L +
Sbjct: 307 IHRKENAGAAEKPITIHATPEGSSE----ACRLILEIMQKEADETKSAEEI-PLKILAHN 361
Query: 441 SEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
S +G L G++G +L ++ + TG I I +++ + + + + G I+A +A VE+
Sbjct: 362 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEVEI 419
Query: 500 TTRLRSYLYRDFF----QKETPP----SSTG--PTGSALVVEAASPIDITPAREVQTVTD 549
+LR D Q P S+ G TG +++ A P T A
Sbjct: 420 MKKLREAYENDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPHGATAASPYN---- 475
Query: 550 PPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVV 609
P A+H S + S+ A +V + E V+N +
Sbjct: 476 -PFASH-SPYLSGLYGASRVGAFPHQHSVPEQE---------VVN-------------LF 511
Query: 610 LPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ-PEGTQKIIQISGTPEQVERAQSVLQ 668
+P AV +I K + + + +GAS+ + + P+ +++++ I+G PE +AQ +
Sbjct: 512 IPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRIF 571
Query: 669 G 669
G
Sbjct: 572 G 572
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 55/358 (15%)
Query: 336 MSDSVQPFYGE-------------DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLK 382
+S QP +G L R+L +VG +IG+ V+ ++ E G +
Sbjct: 21 LSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 80
Query: 383 VADPVDGSDEQIITISSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLL 437
+++ E+I+TI+ GP D +F A + + I + + A +T RL+
Sbjct: 81 ISE--GNCPERIVTIT---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLV 135
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDAL 496
VP+S+ G L G+ GS + E+R STGA +Q+ + + +P + T+ V I G DA+
Sbjct: 136 VPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISG----TPDAI 187
Query: 497 VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ 556
++ ++ + E+PP A P PA A T Q
Sbjct: 188 IQCVKQICVVML------ESPPKG-----------ATIPYRPKPASTPVIFAGGQAYTIQ 230
Query: 557 -SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAV 615
IP Q +K ++ +T + P + P ST E+ +P+ +
Sbjct: 231 GQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPP-----ASTHELTIPNDLI 285
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 343
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 138/364 (37%), Gaps = 101/364 (27%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD 289
S R V++S + I+Q V I V L SP P
Sbjct: 173 STERAVTISGTPDAIIQCVKQICVV------------------------MLESP----PK 204
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAA-------PMSDS 339
+P+ A P + F+G + Y P P + A P+ +
Sbjct: 205 GATIPYRPKPASTPVI----FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT 260
Query: 340 VQPFYGEDL-----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
F G D + P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 261 NPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 320
Query: 395 ITIS 398
ITI+
Sbjct: 321 ITIT 324
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 173/428 (40%), Gaps = 67/428 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPE- 140
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ + A + + + + S G E E + +++
Sbjct: 141 ---NCTNACKRILEVMQQEAISTNKGELSPECSE-------------------ICLKILA 178
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 179 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 234
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 235 ENQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVF 278
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS S P S V P + DL + P + VG +IG + +
Sbjct: 279 NTSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 337
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 338 FSNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 394
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVG 487
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 395 RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIG 452
Query: 488 EIQAARDA 495
+ + A
Sbjct: 453 LFYSVQSA 460
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 74/420 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 195 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 248
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 249 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 281
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 282 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 337
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ D + + + +P +N +A G +G +
Sbjct: 338 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSAL-----GIFSTGLSVLPPP 382
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPF-YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
GPR AP + PF Y E + + P VG +IG+ ++ L G
Sbjct: 383 SGPR---------GAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 433
Query: 379 VDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRL 436
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 434 ASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHI 489
Query: 437 LVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 490 RVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 546
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 46/350 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SG D ++Q V +I ++E + + YR
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGMPDAIIQCVKQICV---VMLESPPKGATIPYR------ 179
Query: 516 TPPSSTGPT----GSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSK 568
P ++ P G A ++ I D + T + +S Q+ S K
Sbjct: 180 -PKPASAPVIFAGGQAYTIQGQYAIPHPDDACLLSAEYKTALTSTLWRSPQLAHPSSQLK 238
Query: 569 EAAGSVSETVK-----QNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSK 623
EAA E+++ +N +E E+ N ST E+ +P+ + +I +
Sbjct: 239 EAAWR-PESLRGKMELKNCNEESENWGMDANP------QASTHELTIPNDLIGCIIGRQG 291
Query: 624 TLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
T + +MSGA + + T++ I I+G+P + AQ ++ + S
Sbjct: 292 TKINEIRQMSGAQIKIANATEGSTERQITITGSPANISLAQYLINARLTS 341
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 139/354 (39%), Gaps = 71/354 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ D I ++ F EE+ V
Sbjct: 64 -------PT------------DAIFKAFAMIAFKFEEDINNSMTNSPA-----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGMPDAIIQ 157
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDY-------VPHMNNT 299
V I V ++ S + + R +P F Y +PH ++
Sbjct: 158 CVKQI-----CVVMLESPPKGATIPYRPK---PASAPVIFAGGQAYTIQGQYAIPHPDDA 209
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS----------DSVQPFYGEDL- 348
+ + + +RS PS EA P S + +G D
Sbjct: 210 CLLSAEYKTALTSTLWRSPQLA-HPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDAN 268
Query: 349 ----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 269 PQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITIT 322
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
INNS + + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 83 INNSMTNSPATSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS 129
+P ER + IS
Sbjct: 138 LPNSTERAVTIS 149
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 168/426 (39%), Gaps = 70/426 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN 141
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ + L ++ + ++ G + +++
Sbjct: 142 ---CTNACKRILEVMQQEAISTNKG---------------------------EICLKILA 171
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 172 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 227
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 228 ENQISTKLRQSYENDL----------QAMAPQSLMFPGLHPMAMMST------PGNGMVF 271
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS S P S V P + DL + P + VG +IG + +
Sbjct: 272 NTSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 330
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 331 FSNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 387
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
+T LLV SS++G + G+ G ++ E++R TG+ I++ P + V I+G
Sbjct: 388 RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLF 447
Query: 490 QAARDA 495
+ + A
Sbjct: 448 YSVQSA 453
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 173/428 (40%), Gaps = 67/428 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPE- 140
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ + A + + + + S G E E + +++
Sbjct: 141 ---NCTNACKRILEVMQQEAISTNKGELSPECSE-------------------ICLKILA 178
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 179 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 234
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 235 ENQISTKLRQSYENDL----------QAIAPQSLMFPGLHPMAMMST------PGNGMVF 278
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS S P S V P + DL + P + VG +IG + +
Sbjct: 279 NTSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMR 337
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 338 FSNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 394
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIVG 487
+T LLV SS++G + G+ G ++ E++R TG+ I++ P SG DE V I+G
Sbjct: 395 RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIG 452
Query: 488 EIQAARDA 495
+ + A
Sbjct: 453 LFYSVQSA 460
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 213 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 272
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 273 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 329 IANATEGSSERQITITGTPANISLAQYLINARLTS 363
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 135/359 (37%), Gaps = 91/359 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 179
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 180 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 239
Query: 298 NTAR-----------------RPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDS 339
+ P+ G + S+ + N + SG D+
Sbjct: 240 QLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL----------DA 289
Query: 340 VQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 290 SPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 75/421 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 195 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 248
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 249 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 281
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 282 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 337
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ D + + + +P +N +A G +G +
Sbjct: 338 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSAL-----GIFSTGLSVLPPP 382
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPF--YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
GPR AP + PF Y E + + P VG +IG+ ++ L
Sbjct: 383 SGPR---------GAPPAAPYHPFAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 433
Query: 378 GVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
G +K+A P +G D E+++ I+ GP + F AQ + ++ +
Sbjct: 434 GASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH 489
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARD 494
+ VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++
Sbjct: 490 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQT 546
Query: 495 A 495
A
Sbjct: 547 A 547
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 165/417 (39%), Gaps = 70/417 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGR 139
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 88 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN- 141
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + L ++ L ++ G + +++
Sbjct: 142 --CTNACKRILEVMQQEALSTNKG---------------------------EICLKILAH 172
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAV 258
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 173 NNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAE 228
Query: 259 AIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
IS++LR+S D P P ++ A + G+ N
Sbjct: 229 NQISTKLRQSYENDLQAMA----------PQSLMFPGLHPMAMMST------PGNGMVFN 272
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNE 376
P PS S P S V P + DL + P + VG +IG + +
Sbjct: 273 TSMPFPSCQSFAMSKTPAS-VVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRF 331
Query: 377 IGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 332 SNASLKIAPLDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVR 388
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
+T LLV SS++G + G+ G ++ E++R TG+ I++ P + V I+G
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPAGGDEETPVHIIG 445
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 213 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 272
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 273 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 329 IANATEGSSERQITITGTPANISLAQYLINARLTS 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 95/371 (25%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF 287
S R V++S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAY 227
Query: 288 --------PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGY 327
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
D+ P +L P D +G +IG + ++ G +K+A+
Sbjct: 288 ----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 333
Query: 388 DGSDEQIITIS 398
+GS E+ ITI+
Sbjct: 334 EGSSERQITIT 344
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 213 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 272
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 273 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 329 IANATEGSSERQITITGTPANISLAQYLINARLTS 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 95/371 (25%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF 287
S R V++S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 173 STERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAY 227
Query: 288 --------PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGY 327
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
D+ P +L P D +G +IG + ++ G +K+A+
Sbjct: 288 ----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 333
Query: 388 DGSDEQIITIS 398
+GS E+ ITI+
Sbjct: 334 EGSSERQITIT 344
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 99
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 100 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 159
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 160 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 211
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 212 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 272 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 327
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 328 IANATEGSSERQITITGTPANISLAQYLINARLTS 362
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 95/371 (25%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 31 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 87
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 88 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 114
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 115 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 171
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF 287
S R V++S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 172 STERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAY 226
Query: 288 --------PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGY 327
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 227 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 286
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
D+ P +L P D +G +IG + ++ G +K+A+
Sbjct: 287 ----------DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT 332
Query: 388 DGSDEQIITIS 398
+GS E+ ITI+
Sbjct: 333 EGSSERQITIT 343
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 119 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 171
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 172 STERAVTISGT 182
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 42/333 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + E+PP
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVML------ESPPKG- 205
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQPSKEAAGSVSETVKQ 580
A P PA A T Q IP Q +K ++ +T
Sbjct: 206 ----------ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+ P + P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 256 PLGQTNPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 310
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 311 NATEGSSERQITITGTPANISLAQYLINARLTS 343
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 138/364 (37%), Gaps = 101/364 (27%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD 289
S R V++S + I+Q V I V L SP P
Sbjct: 173 STERAVTISGTPDAIIQCVKQICVV------------------------MLESP----PK 204
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAA-------PMSDS 339
+P+ A P + F+G + Y P P + A P+ +
Sbjct: 205 GATIPYRPKPASTPVI----FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT 260
Query: 340 VQPFYGEDL-----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
F G D + P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 261 NPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 320
Query: 395 ITIS 398
ITI+
Sbjct: 321 ITIT 324
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 71/424 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH--ELIPGDEERIIEISDTRRRDPEG 138
R+L G +IG+ G I+ I Q T A ++VH E + G E+ I I +PE
Sbjct: 13 LRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV-GSLEKAITIYG----NPEN 67
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ R+LE +E + G ++ +++
Sbjct: 68 CTNAC-----------RRVLE------VMQQEADNTNKG-------------EISLKILA 97
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GKGG I+++ +ET+T+I + SL S + E ++ + G I+N+ A
Sbjct: 98 HNNLIGRIIGKGGSTIKRVMLETETKITV----SSLNDVSSFNMERVITIKGTIDNMSRA 153
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
+IS++LR+S D P P ++ A S G FS S R
Sbjct: 154 EGMISAKLRQSYESDLQAMA----------PQSMMFPGLHPMAMM-STVGMGFSPS-VRG 201
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
P Y GAAP + + GE + P VG +IG + +
Sbjct: 202 TPPAAAPGMYP--PGAAPYAQAGPAGVGETSF--LYIPNSAVGAIIGTRGSHIRNIIRFS 257
Query: 378 GVDLKVADPVDGSD-----EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNII 432
G +K+ +G+ E+ +TI G + + AQ + + A +D +
Sbjct: 258 GASVKITSLPEGTTAEPQAERKVTIV---GTPEAQWKAQYLIFEKMREEGFMPAGEDVRL 314
Query: 433 TTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQA 491
T LLV SS++G + G+ G ++ EM+R+T + I++ + +G + V I+G A
Sbjct: 315 TVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKLPEQ----GASTGEETTVHIIGNFFA 370
Query: 492 ARDA 495
+ A
Sbjct: 371 VQSA 374
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 26/155 (16%)
Query: 100 IIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRRDPEGRMPSFSPAQEALFLIHD 155
IIK +R T I + E + EE ++ I +T D S P Q+ALF +HD
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVS--PTQDALFRVHD 66
Query: 156 RILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIE 215
+++ + E+ EE ++V +++V+ +GC++GKGG+II+
Sbjct: 67 KVVSEK----VHSEDFEE---------------ASQVTVQLLVTSDQIGCVIGKGGQIIQ 107
Query: 216 QMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+ E+ QI IL DH L C +E+VQ+ G+
Sbjct: 108 NIYSESGAQIYILKNDH-LLSCALSFDELVQISGE 141
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITI---SSEEGPDDELF----PAQEALLHIQTRI 421
I++ L+ + +++ + V +E ++TI S E D+ + P Q+AL + ++
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 422 VDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPAC 475
V ++ +T +LLV S +IGC+ G+ G + + + +GA I IL + + +C
Sbjct: 69 VSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSC 128
Query: 476 VSGTDELVQIVGE 488
DELVQI GE
Sbjct: 129 ALSFDELVQISGE 141
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 213 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 272
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 273 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 329 IANATEGSSERQITITGTPANISLAQYLINARLTS 363
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 144/361 (39%), Gaps = 95/361 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 182
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PD 289
+ I+Q V I V ++ S + + +R + + + + + P
Sbjct: 183 TPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
Query: 290 DDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMS 337
D + ++ A + P+ G + S+ + N + SG
Sbjct: 238 PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL---------- 287
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI
Sbjct: 288 DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 343
Query: 398 S 398
+
Sbjct: 344 T 344
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 40/332 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDTI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G +A+++ ++ + + T P
Sbjct: 131 AQVQV-AGDMLP---NSTERAVTISG----TPEAIIQCVRQICVVMLESPPKGATIPYRP 182
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQN 581
PT + ++ I IP Q +K ++ +T
Sbjct: 183 KPTSTPVIFSGGQAYTI----------------QGQYAIPHPDQLTKLHQLAMQQTPFTP 226
Query: 582 ESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVE 641
+ P + P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 227 LGQTTPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 281
Query: 642 GQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 282 AMEGSSERQITITGTPANISLAQYLINARLTS 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 87/347 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTIT---- 64
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F + + I+ S + V
Sbjct: 65 -GPTDTI--FKAFAMIAYKFEEDIINSMSNSPATSKPP--------------------VT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ +P+
Sbjct: 160 CVRQICVV------------------------MLESP----PKGATIPYRP----KPTST 187
Query: 307 GARFSGSNYRS--NNYG-PRPSGYSI-------EAGAAPMSDSVQPFYGEDL-----VFR 351
FSG + Y P P + + P+ + F G D
Sbjct: 188 PVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHE 247
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ ++GS E+ ITI+
Sbjct: 248 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 294
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 81/430 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + +E V +++
Sbjct: 253 -----CSAACKMILE-IMQKEAKDTKTADE---------------------VPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N A F S SN
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLNLAAV------GLFPAS---SNA 382
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P PS S GAAP S + P E + P VG +IG+ ++ L
Sbjct: 383 VPPPPSSVS---GAAPYSSFLPP---EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASA 436
Query: 380 DLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P + D ++ + I+ GP + F AQ + G ++ + T +
Sbjct: 437 SIKIA-PAETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR 492
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA---- 492
VP+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 493 VPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYASQMAQ 549
Query: 493 ---RDALVEV 499
RD L +V
Sbjct: 550 RKIRDILAQV 559
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 103
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 163
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 164 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 215
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 216 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 275
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 276 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 331
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 332 IANATEGSSERQITITGTPANISLAQYLINARLTS 366
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 144/361 (39%), Gaps = 95/361 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 45 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 98
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 99 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 127
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 128 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 185
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PD 289
+ I+Q V I V ++ S + + +R + + + + + P
Sbjct: 186 TPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 240
Query: 290 DDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMS 337
D + ++ A + P+ G + S+ + N + SG
Sbjct: 241 PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL---------- 290
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI
Sbjct: 291 DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 346
Query: 398 S 398
+
Sbjct: 347 T 347
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 123 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 175
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 176 STERAVTISGT 186
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV--DGSDEQIITISSEEGPDDE 406
VFR++ P DKVG +IG ++ L +E ++V D DG+ +I+ +S+ E + E
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 407 LFPAQEALLHIQTRIVD---------LGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEM 456
L PA A + I I + L A I + RLLVP ++ + G+ G ++ +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL----YRDFF 512
+ STG+ ++I+ +E+ + + + +V+I G +AL V LR +L F
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLF 278
Query: 513 QKETP 517
+++ P
Sbjct: 279 ERKNP 283
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 129/316 (40%), Gaps = 54/316 (17%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ER 124
++ P+ P + +R++ K GG+IG+ G IK + T A + V + GD R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
I+ +S + E SPA A I I E E+ G +
Sbjct: 146 IVLVSAREEVEAE-----LSPAMNAAIKIFKHI-----------NEIEDINSDGTL---- 185
Query: 185 FRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
+ R++V ++GK G I+ ++ T + +RI+ D L +M E I
Sbjct: 186 MAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHE-TMGERI 244
Query: 245 VQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
V++ G V NA+ ++ LR+ HG LH +R P+ V + P
Sbjct: 245 VEINGASLEVLNALKLVLGLLRKFLVD-----HGVLHLFERKNPE---VAQPQQSRGNPK 296
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMS-DSVQPFYGEDLVFR----MLCPIDKV 359
G+RF YG PS + AP S D QP + L+ + M P+ V
Sbjct: 297 --GSRFL--------YGHDPSFH------APYSRDLSQP--ADSLITKITRTMQIPLADV 338
Query: 360 GRVIGESEGIVELLQN 375
G +IG VEL+++
Sbjct: 339 GEIIGVRGENVELIRS 354
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 125
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 126 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 185
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 186 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 237
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 238 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 297
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 298 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 353
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+G+P + AQ ++ + S
Sbjct: 354 IANATEGSSERQITITGSPANISLAQYLINARLTS 388
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 145/364 (39%), Gaps = 81/364 (22%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 57 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 113
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 114 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA- 149
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
V R+VV G L+GKGG I+++R T Q+++ LP +S R V+
Sbjct: 150 ---TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 204
Query: 240 MS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF------- 287
+S + I+Q V I V ++ S + + +R + + + + +
Sbjct: 205 ISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYA 259
Query: 288 -PDDDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAA 334
P D + ++ A + P+ G + S+ + N + SG
Sbjct: 260 IPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL------- 312
Query: 335 PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 313 ---DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 365
Query: 395 ITIS 398
ITI+
Sbjct: 366 ITIT 369
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 145 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 197
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 198 STERAVTISGT 208
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 181/438 (41%), Gaps = 87/438 (19%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRD 135
V R+L G +IGK G+ I++I + T + I+VH + G E+ I I T
Sbjct: 171 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST---- 226
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEG S A + + I++ + +E V +
Sbjct: 227 PEG----CSAACKMIL----EIMQKEAKDTKTADE---------------------VPLK 257
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNV 254
++ VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N
Sbjct: 258 ILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENC 313
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
A I ++RE+ D + + H +P +N A F S
Sbjct: 314 CKAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLNLAAV------GLFPAS- 356
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
SN P PS S GAAP S + P E + P VG +IG+ ++ L
Sbjct: 357 --SNAVPPPPSSVS---GAAPYSSFMPP---EQETVHVFIPAQAVGAIIGKKGQHIKQLS 408
Query: 375 NEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P S +++ I+ GP + F AQ + G ++ +
Sbjct: 409 RFASASIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLE 465
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGE 488
T + VP+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G
Sbjct: 466 THIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENEQVIVKIIGH 518
Query: 489 IQAA-------RDALVEV 499
A+ RD L +V
Sbjct: 519 FYASQMAQRKIRDILAQV 536
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 34/339 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G E +
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPG---EKL 237
Query: 579 KQNESERREDV----PTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSG 634
+ SE +++ P + P ST E+ +P+ + +I + T + +MSG
Sbjct: 238 PLHSSEEAQNLMGQSPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 292
Query: 635 ASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
A + + +++ I I+GTP + AQ ++ + S
Sbjct: 293 AQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 138/349 (39%), Gaps = 71/349 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 148 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 298 NTAR--RPSMDGARFSGSNYRSNNY-GPRPSGYSIE-----AGAAPMSDSVQPFYGEDLV 349
+ + +M F + + G + +S E G +P D+ P +L
Sbjct: 208 QLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELT 267
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 268 I----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 145/348 (41%), Gaps = 54/348 (15%)
Query: 340 VQPFYGED--LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+QP G + L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI
Sbjct: 6 IQPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTI 63
Query: 398 SSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS 452
+ GP D +F A + + I + + A +T RL+VP+S+ G L G+ GS
Sbjct: 64 T---GPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 453 -LSEMRRSTGANIQIL-----SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY 506
+ EMR STGA +Q+ + E +SGT E + IQ + V
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAI-----IQCVKQICV--------- 166
Query: 507 LYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQ 565
E+PP A P PA + A T Q IP Q
Sbjct: 167 -----VMLESPPKG-----------ATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQ 210
Query: 566 PSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTL 625
+K ++ +T + P + P ST E+ +P+ + +I + T
Sbjct: 211 LTKLHQLAMQQTPFTPLGQATPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTK 265
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 266 INEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARLTS 313
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 134/347 (38%), Gaps = 87/347 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTIT---- 64
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F + + I+ S + V
Sbjct: 65 -GPTDTI--FKAFAMIAYKFEEDIINSMSNSPATSKPP--------------------VT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ A P +
Sbjct: 160 CVKQICVV------------------------MLESP----PKGATIPYRPKPASTPVI- 190
Query: 307 GARFSGSNYRS--NNYG-PRPSGYSI-------EAGAAPMSDSVQPFYGEDL-----VFR 351
FSG + Y P P + + P+ + F G D
Sbjct: 191 ---FSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQATPAFPGLDASPPASTHE 247
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ ++GS E+ ITI+
Sbjct: 248 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 294
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 240
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 241 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 297 IANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 144/361 (39%), Gaps = 95/361 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PD 289
+ I+Q V I V ++ S + + +R + + + + + P
Sbjct: 151 TPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Query: 290 DDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMS 337
D + ++ A + P+ G + S+ + N + SG
Sbjct: 206 PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL---------- 255
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI
Sbjct: 256 DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 311
Query: 398 S 398
+
Sbjct: 312 T 312
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 71/338 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ + V
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDISSSMTNSTATSK---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + ES P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLESP------------------PKGVTIPYRP----KPSGSPVIFAGG 192
Query: 314 N---YRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYGEDLVFR-----MLCPIDKVG 360
+ + P+P +++ P++ S Q F G D + M P D +G
Sbjct: 193 QAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIG 252
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PVDGS ++ +TI+
Sbjct: 253 CIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 113
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 114 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 173
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 174 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 225
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 226 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 285
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 286 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 341
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 342 IANATEGSSERQITITGTPANISLAQYLINARLTS 376
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 142/354 (40%), Gaps = 81/354 (22%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 55 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 108
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 109 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA----TSKPPVT 144
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 145 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAIIQ 202
Query: 247 VVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PDDDYVPHM 296
V I V ++ S + + +R + + + + + P D + +
Sbjct: 203 CVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL 257
Query: 297 NNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY 344
+ A + P+ G + S+ + N + SG D+ P
Sbjct: 258 HQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL----------DASPPAS 307
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 308 THELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 357
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 133 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 185
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 186 STERAVTISGT 196
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 147/346 (42%), Gaps = 56/346 (16%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
+ + +P+D L +T T R+L H + G +IGK G +K IR+ + A I + E
Sbjct: 8 SSVSGSPEDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE------- 60
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
PE R+ + + + +A+F I F EE+ G G
Sbjct: 61 ---------GSCPE-RITTITGSTDAVFRAVSMI-------AFKLEEDL------GAGSD 97
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
G G + V R+V+ G L+GK G I ++R T Q+++ LP +S R V+
Sbjct: 98 GAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLP--NSTERAVT 155
Query: 240 MSEEIVQVVGD--INNVKNAVAIISSRLRESQHRDRSHF---HGRLHSPDRFFPDDDYVP 294
+S V D I+ V+ A+I ES + F HG L P + P
Sbjct: 156 VSG-----VPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGYL-PPKMTLSLISWSP 209
Query: 295 HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP--MSDSVQPFYGEDLVFRM 352
+ + P++ G + + +Y RP+ + + + P + S Q E LV
Sbjct: 210 CTHQSPPNPAV-GKHWHPIMTDAYSYW-RPTTPLLTSLSLPPGLDTSSQNSSQEFLV--- 264
Query: 353 LCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+ + +GS E+ +TI+
Sbjct: 265 --PNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTIT 308
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 65/345 (18%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L RML ++G +IG+ V+ ++ + + +++ E+I TI+ G D +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE--GSCPERITTIT---GSTDAV 77
Query: 408 FPAQEALLHIQTRIV-DLGADKDNI------ITTRLLVPSSEIGCLEGRDGS-LSEMRRS 459
F A+ I ++ DLGA D +T RL++P+S+ G L G+ G+ + E+R S
Sbjct: 78 F---RAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRES 134
Query: 460 TGANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQ 513
TGA +Q+ + E VSG D ++ V +I A ++EV T + + F
Sbjct: 135 TGAQVQVAGDLLPNSTERAVTVSGVPDTIIHCVRQICA---VILEVPTESPTQAWGAFPH 191
Query: 514 KE--TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAA 571
+ PP T L + + SP THQS P A
Sbjct: 192 QHGYLPPKMT------LSLISWSP-----------------CTHQS--------PPNPAV 220
Query: 572 GSVSETVKQNESERREDVPTVINRVPLP--LVT---RSTLEVVLPDYAVPKLITKSKTLL 626
G + + ++ + LP L T S+ E ++P+ + +I + + +
Sbjct: 221 GKHWHPIMTDAYSYWRPTTPLLTSLSLPPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKI 280
Query: 627 TRFSEMSGASVSLVEGQPEG-TQKIIQISGTPEQVERAQSVLQGF 670
+ +MSGA + + Q EG +++ + I+G+P + AQ ++ +
Sbjct: 281 SEIRQMSGAHIK-IGNQTEGSSERHVTITGSPVSITVAQYLITAW 324
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 140/338 (41%), Gaps = 52/338 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDTI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQIL-----SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
A +Q+ + E +SGT E + IQ + V E+
Sbjct: 131 AQVQVAGDMLPNSTERAVTISGTPEAI-----IQCVKQICV--------------VMLES 171
Query: 517 PPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQPSKEAAGSVS 575
PP A P PA + A T Q IP Q +K ++
Sbjct: 172 PPKG-----------ATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 220
Query: 576 ETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
+T + P + P ST E+ +P+ + +I + T + +MSGA
Sbjct: 221 QTPFTPLGQTTPAFPGLDAAPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 275
Query: 636 SVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ + +++ I I+GTP + AQ ++ + S
Sbjct: 276 QIKIANAMEGSSERQITITGTPANISLAQYLINARLTS 313
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 134/347 (38%), Gaps = 87/347 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTIT---- 64
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F + + I+ S + V
Sbjct: 65 -GPTDTI--FKAFAMIAYKFEEDIINSMSNSPATSKPP--------------------VT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ A P +
Sbjct: 160 CVKQICVV------------------------MLESP----PKGATIPYRPKPASTPVI- 190
Query: 307 GARFSGSNYRS--NNYG-PRPSGYSI-------EAGAAPMSDSVQPFYGEDLV-----FR 351
FSG + Y P P + + P+ + F G D
Sbjct: 191 ---FSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPASTHE 247
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ ++GS E+ ITI+
Sbjct: 248 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 294
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 240
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 241 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 297 IANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 144/361 (39%), Gaps = 95/361 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFF--------PD 289
+ I+Q V I V ++ S + + +R + + + + + P
Sbjct: 151 TPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Query: 290 DDYVPHMNNTARR-----------PSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMS 337
D + ++ A + P+ G + S+ + N + SG
Sbjct: 206 PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL---------- 255
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
D+ P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI
Sbjct: 256 DASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 311
Query: 398 S 398
+
Sbjct: 312 T 312
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 171/435 (39%), Gaps = 72/435 (16%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI-P 119
N + + P P + R+L G +IGK G I++I Q T A I+VH P
Sbjct: 176 NGPQQGGAYPNRPKNIPDLPTRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNP 235
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
G E+ I I+ T PE + L ++ D + G + +++
Sbjct: 236 GATEKAITINGT----PEA---CGAAVGAILDIVRDEDRNARQAAGTWNDDD-------- 280
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
+ +++ +G L+GK G+ ++ ++ + +T+I I + +C
Sbjct: 281 ------------IPLKILAHNSLIGRLIGKEGRNLKAIQEKVETKIAISNSMADMQQC-- 326
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYVPHMNN 298
+E + + GD + A ++ +LR D + H P F +
Sbjct: 327 NAERTIAIYGDNDRCAEAEVLLMEKLRSCYENDMMIAQQQPHQYPGINFNQLSMFGGLQG 386
Query: 299 TARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDK 358
P M R G NY+ N+ R GY+ + A MS++ + P +
Sbjct: 387 GYGHPGM---REYGMNYQGQNF--RGQGYNGDQ-RAQMSETCT----------LYIPAES 430
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ---IITISSEEGPDDELFP-----A 410
VG +IG + + +K+ P DG DE+ + + S EG F
Sbjct: 431 VGAMIGSKGSHIRNISRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWKSQFCIFDKLK 490
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSR 469
QE + + D +T+ + +P++ +G + G+ G ++ E++R T + + I +
Sbjct: 491 QEGFFNAE----------DERLTSEMTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPRQ 540
Query: 470 ------EEVPACVSG 478
EEVP + G
Sbjct: 541 SETEGLEEVPVKICG 555
>gi|412993678|emb|CCO14189.1| predicted protein [Bathycoccus prasinos]
Length = 335
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 68 SNP-KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEE 123
SNP DP+ + ++L AG V+GK G+ I ++ T I + E+ PG E
Sbjct: 18 SNPHSDPAFAL----KMLVDSRNAGAVLGKGGATINELQTSTNCRIQLTRTGEVFPGTSE 73
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
R++ +S G +PS A+ LI ++ G E
Sbjct: 74 RVLTLS--------GELPSV---LTAVHLISTKLQSETNNGNNNNNNENNEENFENTNTN 122
Query: 184 GFRGGGNRVAT---RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
G N+ T R+V+ GC+LGKGG I+ +++ +IR+ ++ + P C
Sbjct: 123 TEGGEENKQQTPKCRLVIPNAAAGCVLGKGGATIKSFIEDSEAEIRLSSQNQAPPGC--- 179
Query: 241 SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA 300
+ I+ + G I + AVA++++ L E Q ++ + P + P DY
Sbjct: 180 HDRILTISGTIGQILRAVALVAANLLEDQ-----NYATLVKRPSTYRPSLDY-------G 227
Query: 301 RRPSMDGAR 309
R SMD R
Sbjct: 228 RGGSMDHGR 236
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRR 134
T R++ + AG V+GK G+ IKS + + A I + ++ PG +RI+ IS T
Sbjct: 133 TPKCRLVIPNAAAGCVLGKGGATIKSFIEDSEAEIRLSSQNQAPPGCHDRILTISGT--- 189
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE-----EYGGGGGV--GGGGFRG 187
A+ L+ +LE +YG GG + G G +
Sbjct: 190 --------IGQILRAVALVAANLLEDQNYATLVKRPSTYRPSLDYGRGGSMDHGRGHYNN 241
Query: 188 GG-----------NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPR 236
N V+ M V +G +LGKGG+ I ++++ + +I++ R+ +P
Sbjct: 242 NHHHQQQHNVDPQNVVSATMQVDDSKMGPILGKGGRTITEIQVSSGCRIKVSDRNDFVP- 300
Query: 237 CVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ +Q+ G + V+ A ++ RLR+
Sbjct: 301 --GTNLRTLQISGSVTGVQLAWEMLEERLRK 329
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 213 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 272
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 273 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 328
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA- 124
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
V R+VV G L+GKGG I+++R T Q+++ LP +S R V+
Sbjct: 125 ---TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 179
Query: 240 MS---EEIVQVVGDINNV 254
+S + I+Q V I V
Sbjct: 180 ISGTPDAIIQCVKQICVV 197
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 60/334 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 42 TLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTG--------- 92
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + +A L+ D +++ G +G GG G N R+++S
Sbjct: 93 --ALTGIADAYGLVADSLVK----------------GAPQMGMGGVVGSPNTHPIRLLIS 134
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G ++ +V
Sbjct: 135 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIQKSVW 189
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT-------------ARRPSMD 306
I L + + R + L+SP P +N AR + +
Sbjct: 190 EIGKCLIDDEQRG---YGTVLYSPAVRV-QGGAPPAINGASPVGFGGGAPRSFAR--TGN 243
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML-CPIDKVGRVIGE 365
GA F+ S +++Y PR +G S +AG P+ + GED+ + + P D VG +IG
Sbjct: 244 GADFT-SGAPASSYPPRRNGGS-DAGPPPVVED-----GEDIQTQNISIPADMVGCIIGR 296
Query: 366 SEGIVELLQNEIGVDLKVAD-PVDGSDEQIITIS 398
+ ++ G + +A P D S E++ TI+
Sbjct: 297 GGSKISEIRKSSGARISIAKAPHDESGERMFTIT 330
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 42/333 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + E+PP
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVML------ESPPKG- 173
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQPSKEAAGSVSETVKQ 580
A P PA A T Q IP Q +K ++ +T
Sbjct: 174 ----------ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+ P + P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 224 PLGQTNPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 278
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 279 NATEGSSERQITITGTPANISLAQYLINARLTS 311
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 135/354 (38%), Gaps = 101/354 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAA-------PMSDSVQPFYGEDL- 348
A P + F+G + Y P P + A P+ + F G D
Sbjct: 183 ASTPVI----FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 238
Query: 349 ----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 239 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 292
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 71/338 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ + V
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDISSSMTNSTATSK---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + ES P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLESP------------------PKGVTIPYRP----KPSGSPVIFAGG 192
Query: 314 N---YRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYGEDLVFR-----MLCPIDKVG 360
+ + P+P +++ P++ S Q F G D + M P D +G
Sbjct: 193 QAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIG 252
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PVDGS ++ +TI+
Sbjct: 253 CIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 71/338 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ + V
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDISSSMTNSTATSK---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + ES P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLESP------------------PKGVTIPYRP----KPSGSPVIFAGG 192
Query: 314 N---YRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYGEDLVFR-----MLCPIDKVG 360
+ + P+P +++ P++ S Q F G D + M P D +G
Sbjct: 193 QAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIG 252
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PVDGS ++ +TI+
Sbjct: 253 CIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 42/333 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + E+PP
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVML------ESPPKG- 173
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQ-SVQIPATSQPSKEAAGSVSETVKQ 580
A P PA A T Q IP Q +K ++ +T
Sbjct: 174 ----------ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 581 NESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV 640
+ P + P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 224 PLGQTNPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 278
Query: 641 EGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 279 NATEGSSERQITITGTPANISLAQYLINARLTS 311
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 135/354 (38%), Gaps = 101/354 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAA-------PMSDSVQPFYGEDL- 348
A P + F+G + Y P P + A P+ + F G D
Sbjct: 183 ASTPVI----FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 238
Query: 349 ----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 239 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 292
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 166/394 (42%), Gaps = 71/394 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 291 RILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPENCTN 347
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ RILE +E G + +++
Sbjct: 348 ACK-----------RILE------VMQQEANNTNKG-------------EICLKILAHNN 377
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ ET T+I + S+ S + E I+ V G I+N+ A A
Sbjct: 378 LIGRIIGKGGNTIKRIMQETDTKITV----SSINDINSFNLERIITVKGAIDNMSRAEAQ 433
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
IS++LR+S D P P ++ A + G + GS
Sbjct: 434 ISAKLRQSYENDLQAMA----------PQTMMFPGLHPMAMMATA-GIGY-GSRGLYTGQ 481
Query: 321 GPRPSGYSIEAGAAP-MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P P Y AGAA DS + Y + P + VG +IG + + G
Sbjct: 482 APYPGMYP--AGAAQGGGDSQETTY-------LYIPNNAVGAIIGTKGSHIRNIIRFSGA 532
Query: 380 DLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-IT 433
+K+A P + +E+ +TI G + + AQ L+ + R A D++ +T
Sbjct: 533 SVKIAPIDETKPQETQNERRVTIV---GSPEAQWKAQ-YLIFEKMREEGFVAGSDDVRLT 588
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
++VPSS++G + G+ G ++ E++R TG+ I++
Sbjct: 589 VEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKL 622
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 62.0 bits (149), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 399 SEEGPDDE-LFPAQEALLHIQTRIVDLGADKDNII--------TTRLLVPSSEIGCLEGR 449
+E+G ++E + PAQ+ALL + + I + KD RLLV +S+IG L G+
Sbjct: 7 NEDGDENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G+ + +MR +GA IQI ++E+P C DELV I G+ +A + AL V+ ++LY
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVS----AFLY 122
Query: 509 RDFFQKETPPSSTGP 523
+ +++ P S P
Sbjct: 123 KHPPKEQIPWSLILP 137
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R++V+ +G L+GKGG I++MR E+ QI+I PR LP C +E+V + GD V
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQI-PRKDELPGCAFSFDELVVISGDAKAV 110
Query: 255 KNAVAIISSRL 265
K A+ +S+ L
Sbjct: 111 KKALYSVSAFL 121
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 136/331 (41%), Gaps = 50/331 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ S +A +I ++ LE D V
Sbjct: 64 -------PTTS-IFKAFSMIIEK-LEEDISTSMTNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R Q+++ LP +E + V G +
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNS---TERAITVAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSM-DG 307
+ V I + ES + R G SP F Y + +P + +G
Sbjct: 155 IIECVKQICIVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIPQPDVSEG 211
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + + P P +S + A M S Q E + P D +G +IG
Sbjct: 212 PSLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHE-----LTIPNDLIGCIIGRQG 266
Query: 368 GIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS ++ +TI+
Sbjct: 267 AKINEIRQMSGAQIKIANPVEGSTDRQVTIT 297
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTSI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I T + + A +T RL+VP+S+ G L G+ G + E+R S G
Sbjct: 69 FKAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + + G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITVAGTPQ----SIIECVKQICIVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ GA +
Sbjct: 79 LEEDISTSMTNSTATSKPP-------VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I ++ T
Sbjct: 132 QVAGDMLPNSTERAITVAGT 151
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 399 SEEGPDDE-LFPAQEALLHIQTRIVDLGADKDNII--------TTRLLVPSSEIGCLEGR 449
+++G ++E + PAQ+ALL + + I + KD RLLV +S+IG L G+
Sbjct: 7 NDDGDENEPICPAQDALLRVHSVIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGK 66
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G+ + +MR +GA IQI ++E+P C DELV I G+ A + AL V+ ++LY
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVS----AFLY 122
Query: 509 RDFFQKETPPSSTGP 523
+ +++ P S P
Sbjct: 123 KHLPKEQIPWSLILP 137
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R++V+ +G L+GKGG I++MR E+ QI+I PR LP C +E+V + GD V
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQI-PRKDELPGCAFSFDELVVISGDATAV 110
Query: 255 KNAVAIISSRL 265
K A+ +S+ L
Sbjct: 111 KKALYAVSAFL 121
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 213 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 272
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 273 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 328
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA- 124
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
V R+VV G L+GKGG I+++R T Q+++ LP +S R V+
Sbjct: 125 ---TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 179
Query: 240 MS---EEIVQVVGDINNV 254
+S + I+Q V I V
Sbjct: 180 ISGTPDAIIQCVKQICVV 197
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 161 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 212
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 213 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 272
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 273 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 328
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA- 124
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
V R+VV G L+GKGG I+++R T Q+++ LP +S R V+
Sbjct: 125 ---TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 179
Query: 240 MS---EEIVQVVGDINNV 254
+S + I+Q V I V
Sbjct: 180 ISGTPDAIIQCVKQICVV 197
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|294657857|ref|XP_460153.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
gi|199432999|emb|CAG88426.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
Length = 347
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 154/373 (41%), Gaps = 73/373 (19%)
Query: 47 NNTNNIMNNNTSINNSNNRANSNPK---DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKS 103
NNT + N S +N+N N+ P + + YR+L ++G +IG++G++I S
Sbjct: 30 NNTGVSPSTNGSNDNANGETNTLPSINDNSNSSALINYRVLVSAKESGCLIGQNGAVIDS 89
Query: 104 IRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGG 163
IR+ T + +L PG ERI+ +S T D + F+ A + + +E+
Sbjct: 90 IREETNTKAGISKLQPGSHERILTVSGT-LDDCAKALSYFAQA------LCNANIENLVS 142
Query: 164 GGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
++ ++ V G R+++ +G L+G G I+Q ++
Sbjct: 143 YSYF--PLKQLSSNPCV-------EGETTILRLLIPNAQMGTLIGSKGARIQQ--IQANY 191
Query: 224 QIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSP 283
I ++ LP +E +V++ G ++N+ +++ IIS L E D S G +
Sbjct: 192 NISMIASKSFLP---GSNERLVELQGTVDNLYDSLRIISRCLIE----DFSSIVGTSY-- 242
Query: 284 DRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPF 343
YVP +N AR + RF+ N A S S
Sbjct: 243 --------YVPKASNYARNNNQTNKRFNNQN------------------AVTTSISFAN- 275
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
D VG +IG++ ++ ++ G + ++D V+G E++ TIS G
Sbjct: 276 -------------DMVGALIGKNGSRIQGVRKVSGATIGISDEVEGKPERVFTIS---GT 319
Query: 404 DDELFPAQEALLH 416
+ A+ L H
Sbjct: 320 AHAVEKAKSLLYH 332
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 32 YYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAG 91
YY P + R NNN TN NN ++ TT +DM G
Sbjct: 242 YYVPKASNYAR--NNNQTNKRFNNQNAV-------------------TTSISFANDM-VG 279
Query: 92 GVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
+IGK+GS I+ +R+ +GA I + + + G ER+ IS T
Sbjct: 280 ALIGKNGSRIQGVRKVSGATIGISDEVEGKPERVFTISGT 319
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIR-QHTGAWINVHELIPGDEERIIEISDTRRRDP 136
TT R+L + + G +IG G+ I+ I+ + + I +PG ER++E+ T
Sbjct: 161 TTILRLLIPNAQMGTLIGSKGARIQQIQANYNISMIASKSFLPGSNERLVELQGT----- 215
Query: 137 EGRMPSFSPAQEALFLIHDRILE---SDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
++L +I ++E S G +Y + Y F N V
Sbjct: 216 ------VDNLYDSLRIISRCLIEDFSSIVGTSYYVPKASNYARNNNQTNKRFNNQ-NAVT 268
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
T + + VG L+GK G I+ +R + I I P E + + G +
Sbjct: 269 TSISFANDMVGALIGKNGSRIQGVRKVSGATIGISDEVEGKP------ERVFTISGTAHA 322
Query: 254 VKNAVAIISSRL-RESQHRDRSH 275
V+ A +++ L RE Q R S
Sbjct: 323 VEKAKSLLYHNLEREEQRRAESE 345
>gi|383139538|gb|AFG51032.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139540|gb|AFG51033.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139542|gb|AFG51034.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139544|gb|AFG51035.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139546|gb|AFG51036.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139548|gb|AFG51037.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139550|gb|AFG51038.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139552|gb|AFG51039.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
gi|383139554|gb|AFG51040.1| Pinus taeda anonymous locus CL1760Contig1_04 genomic sequence
Length = 76
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 600 LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQ 659
LVT++T+EVV+P++A+ LI S +T+ S++SGA V+L+E +P G+ K+I+ISGTPEQ
Sbjct: 16 LVTKTTVEVVIPEHAIAPLIANSGKGVTQISQISGAKVNLLEVRP-GSDKVIEISGTPEQ 74
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 140/370 (37%), Gaps = 111/370 (30%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE---GNCPERIVTITG--- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 66 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA----TSKPPVT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGAPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ A P +
Sbjct: 160 CVKQICVV------------------------LLESP----PKGATIPYRPKPASTPVI- 190
Query: 307 GARFSGSNYRSNNYG-------------PRPSGYSIEAGAA------------------- 334
FSG R++ G P P+ Y+I+ A
Sbjct: 191 ---FSGGQVRADPLGASTANLSLLLQHQPLPA-YTIQGQYAIPHPDLSKLHQLAMQQTPF 246
Query: 335 -PMSDSVQPFYGEDL-----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD 388
P+ + F G D + P D +G +IG + ++ G +K+A+ ++
Sbjct: 247 TPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME 306
Query: 389 GSDEQIITIS 398
GS E+ ITI+
Sbjct: 307 GSSERQITIT 316
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 146/340 (42%), Gaps = 46/340 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ + G + +++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVTIT---GPTDAI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G A +A+++ ++ L + T P
Sbjct: 131 AQVQV-AGDMLP---NSTERAVTISG----APEAIIQCVKQICVVLLESPPKGATIPYRP 182
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQN 581
P + ++ Q DP A+ ++ + QP +
Sbjct: 183 KPASTPVIFSGG-----------QVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHP 231
Query: 582 ESERREDVPTVINRVPL-PL-------------VTRSTLEVVLPDYAVPKLITKSKTLLT 627
+ + + + + P PL ST E+ +P+ + +I + T +
Sbjct: 232 DLSKLHQL--AMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKIN 289
Query: 628 RFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+MSGA + + +++ I I+GTP + AQ ++
Sbjct: 290 EIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLI 329
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEIS 129
ER + IS
Sbjct: 143 STERAVTIS 151
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQN 581
P A++P+ I + T+ A H + +K ++ +T
Sbjct: 181 KP--------ASTPV-IFAGGQAYTIQGQYAIPHPDL--------TKLHQLAMQQTPFPP 223
Query: 582 ESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVE 641
+ P ++ P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 224 LGQTNPAFPAGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 279
Query: 642 GQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 280 ATEGSSERQITITGTPANISLAQYLINARLTS 311
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 134/354 (37%), Gaps = 101/354 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------ISSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPS-----GYSIEAGAAPMSDSVQPFYGEDL--- 348
A P + F+G + Y P P +++ P P + L
Sbjct: 183 ASTPVI----FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDAS 238
Query: 349 ----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 239 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 292
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILS 468
A EA+L +Q +I D + D+ + RLLV S IGC+ G+ GS ++E+R+ T A+++I S
Sbjct: 2 AVEAILLLQGKIND---EDDDTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI-S 57
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF---FQKETPPSSTGPTG 525
+ P C DELV++VGE+ + RDALV++ RLR + ++ S P G
Sbjct: 58 KGAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLVGTDSVYPVG 117
Query: 526 SALVVEAASP 535
+ L + + P
Sbjct: 118 AGLSIPSILP 127
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
+ V R++V +GC++GKGG I ++R T +RI + P C ++E+V+VVG
Sbjct: 19 DTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI--SKGAKPNCADSNDELVEVVG 76
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP 288
++++V++A+ I RLR+ +++ L D +P
Sbjct: 77 EVSSVRDALVQIVLRLRDDVLKEKDGGLNSLVGTDSVYP 115
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELF 408
VFRML P KVG VIG S + L E ++V + E+ + I ++E PD+
Sbjct: 241 VFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKP 300
Query: 409 PAQEALLHI-QTRIVDLGAD--KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANI 464
PA +ALL + + I D G D +NI+ R+L PS + L G GS ++ +++++ NI
Sbjct: 301 PAIDALLRVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 360
Query: 465 QIL 467
++
Sbjct: 361 HVI 363
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 27/167 (16%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD 121
+N A N +DP T+ +R+L K G VIG SG ++ + + T A + V
Sbjct: 224 TNCSAGEN-RDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAA 282
Query: 122 EERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVG 181
ER + I + P+ P PA +AL +++ + DG Y
Sbjct: 283 AERAVII--FAKEQPDEPKP---PAIDALLRVYECTINDDGLDVRY-------------- 323
Query: 182 GGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
N V R++ L+G G +I ++ +KT I ++
Sbjct: 324 -------NNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVI 363
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 167/426 (39%), Gaps = 70/426 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEG 138
RIL G +IG+ GS I++I Q + A ++VH +E + +E S T +PE
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN 141
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ RILE +E G + +++
Sbjct: 142 CTNAC-----------KRILE------VMQQEANSTNKG-------------EICLKILA 171
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNA 257
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ A
Sbjct: 172 HNNLIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRA 227
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
IS++LR+S D P P ++ A + G+
Sbjct: 228 ENQISTKLRQSYENDLQAMA----------PQSLMFPGLHPMAMMST------PGNGMVF 271
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQN 375
N P PS P ++ V P + D+ + P + VG +IG + +
Sbjct: 272 NTSMPFPSCQGFAMSKTP-ANVVPPVFPNDMQETTYLYIPNNAVGAIIGTKGSHIRSIMR 330
Query: 376 EIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LK+A P+D E+ +TI G + + AQ + + D
Sbjct: 331 FSNASLKIAPIDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDV 387
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
+T LLV SS++G + G+ G ++ E++R TG+ I++ P + V I+G
Sbjct: 388 RLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPF 447
Query: 490 QAARDA 495
+ + A
Sbjct: 448 YSVQSA 453
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDE--ER 124
P P+ M TTY + ++ G +IG GS I+SI + + A + + + P D+ ER
Sbjct: 295 PVFPNDMQETTYLYIPNN-AVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTER 353
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
+ I T PEG+ +A ++I +++ E G
Sbjct: 354 KVTIVGT----PEGQW-------KAQYMIFEKMREE-----------------------G 379
Query: 185 FRGGGN--RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
F G + R+ ++V+ VG ++GKGG+ + +++ T + I+ LP P E
Sbjct: 380 FMCGTDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEE 438
Query: 243 EIVQVVGDINNVKNA 257
V ++G +V++A
Sbjct: 439 TPVHIIGPFYSVQSA 453
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 139/338 (41%), Gaps = 58/338 (17%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I L +Y + +
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI---------CVVMLEAYTIQGQYAIP 211
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P D+T ++ Q P Q + G
Sbjct: 212 HP-------------------DLTKLHQL---------AMQQTPFPPLGQTNPAFPGEKL 243
Query: 576 ETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
E++ + ++ P ST E+ +P+ + +I + T + +MSGA
Sbjct: 244 PLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 299
Query: 636 SVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ + +++ I I+GTP + AQ ++ + S
Sbjct: 300 QIKIANATEGSSERQITITGTPANISLAQYLINARLTS 337
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 87/344 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMI--------AYKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 182
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ----HRDRSHFHGRLHSPDRFFPDDDYVPH 295
+ I+Q V I V ++ + + Q H D + H F P
Sbjct: 183 TPDAIIQCVKQI-----CVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPF-------PP 230
Query: 296 MNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+ T P+ G + S+ + N + SG D+ P +L
Sbjct: 231 LGQT--NPAFPGEKLPLHSSEEAQNLMGQSSGL----------DASPPASTHELTI---- 274
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 275 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 318
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 181 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 240
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 241 QTPFPPLGQANPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 296
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 297 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 64 ------------PTDAIFKAFAMI--------AYKFEEDIVNSMSNSPA----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAIIQ 157
Query: 247 VVGDINNV 254
V I V
Sbjct: 158 CVKQICVV 165
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 150/357 (42%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 181 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 240
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
+P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 241 QTPLPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 296
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 297 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 64 ------------PTDAIFKAFAMI--------AYKFEEDIINSMSNSPA----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAIIQ 157
Query: 247 VVGDINNV 254
V I V
Sbjct: 158 CVKQICVV 165
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 26/335 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+ + ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIFQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREV---QTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
P + ++ I + +T Q P Q + G
Sbjct: 181 KPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 240
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 241 SSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 639 LVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 297 IANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 135/359 (37%), Gaps = 91/359 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 148 ISGTPDAIFQCVKQICVVMLESPPKGATIPYRPKPACTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 298 NTAR-----------------RPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDS 339
+ P+ G + S+ + N + SG D+
Sbjct: 208 QLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL----------DA 257
Query: 340 VQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P +L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 258 SPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 171/419 (40%), Gaps = 72/419 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK++ + T + +++H + G E+ I I T PEG
Sbjct: 196 RILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHAT----PEG-- 249
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I D I++ + EE + +++
Sbjct: 250 -----CSEACRMILD-IMQKEAEETKSAEE---------------------IPLKILAHN 282
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G I NA A
Sbjct: 283 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQD---LTIYNPERTITVKGSIEACSNAEAE 339
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
I ++LRE+ D + +N A + G + S
Sbjct: 340 IMNKLREAYEND--------------------IVTVNQQANL--IPGLNLNALGIFSTGL 377
Query: 321 GPRPSGYSIEAGAAPMSDSVQPF-YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
PSG + A +S PF E V + P VG +IG+ ++ L G
Sbjct: 378 SMLPSGTGVRRPA--VSTPYNPFAVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGA 435
Query: 380 DLKVADPVDG--SDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P + + E+++ I+ GP + F AQ + ++ + +
Sbjct: 436 SIKIA-PAESPEASERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 491
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 492 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVVVKIIGHFFASQTA 547
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 141/332 (42%), Gaps = 54/332 (16%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 110
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 111 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 170
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 171 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 222
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQN 581
P + ++ I + Q P + V +P +S
Sbjct: 223 KPASTPVIFAGGQAYTI----QGQYAIPHPDVSFHFVCLPFSS----------------- 261
Query: 582 ESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVE 641
++ P ST E+ +P+ + +I + T + +MSGA + +
Sbjct: 262 ----------CLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 307
Query: 642 GQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+++ I I+GTP + AQ ++ + S
Sbjct: 308 ATEGSSERQITITGTPANISLAQYLINARLTS 339
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 134/345 (38%), Gaps = 97/345 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 52 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 105
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 106 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 134
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 135 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 192
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 193 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 224
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAAPMS---DSVQPFYGEDLVFRML 353
A P + F+G + Y P P S P S D+ P +L
Sbjct: 225 ASTPVI----FAGGQAYTIQGQYAIPHPD-VSFHFVCLPFSSCLDASPPASTHELTI--- 276
Query: 354 CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 277 -PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 320
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 130 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 182
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 183 STERAVTISGT 193
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 48/357 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEA----ASPIDITPAREVQTVTDPPAATH---------------------Q 556
P + ++ A P+ + A + PP + Q
Sbjct: 181 KPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQ 240
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 241 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 296
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 297 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 64 ------------PTDAIFKAFAMI--------AYKFEEDIINSMSNSPA----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAIIQ 157
Query: 247 VVGDINNV 254
V I V
Sbjct: 158 CVKQICVV 165
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIV-------DLGADKDNIITTRLLVPSSEIGCLEGR 449
+S++E PD + PA + LL + ++V D + + TRLLV ++ G L G+
Sbjct: 2 VSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGK 61
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
GS + + +TG NI+IL E +P D +V+I GE A+ V LR +L
Sbjct: 62 QGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFL 120
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
G G V TR++V+ G L+GK G I+ + T IRIL +H LP + +V+
Sbjct: 39 GAGRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEH-LPVFALRDDSVVE 97
Query: 247 VVGDINNVKNAVAIISSRLRE 267
+ G+ + V AV +++ LR+
Sbjct: 98 IQGESSGVHKAVELVAIHLRK 118
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 56/350 (16%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++E + + YR
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV---VMLESPPKGATIPYR------ 179
Query: 516 TPPSSTGPT----GSALVVEAA----SPIDITPAREVQTVTDPPAATHQSV-QIPATSQP 566
P ++ P G A ++ P +T ++ P Q+ P P
Sbjct: 180 -PKPASAPVIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLP 238
Query: 567 ---SKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSK 623
S+EA + ++ + S + ST E+ +P+ + +I +
Sbjct: 239 LHSSEEAQNLMGQSAGMDASSQ-----------------ASTHELTIPNDLIGCIIGRQG 281
Query: 624 TLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
T + +MSGA + + ++ I I+G+P + AQ ++ + S
Sbjct: 282 TKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARLTS 331
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 136/374 (36%), Gaps = 121/374 (32%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPSGYSI-------EAGAAPMSDSVQPFYGEDL- 348
A P + F+G S Y P P + + P+ + F GE L
Sbjct: 183 ASAPVI----FAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLP 238
Query: 349 ------------------------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
+ P D +G +IG + ++ G +K+A
Sbjct: 239 LHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 298
Query: 385 DPVDGSDEQIITIS 398
++GS E+ ITI+
Sbjct: 299 SAMEGSAERQITIT 312
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 399 SEEGPDDE-LFPAQEALLHIQTRIVDLGADKDNII--------TTRLLVPSSEIGCLEGR 449
+++G ++E + PAQ+ALL + + I + KD RLLV +S+IG L G+
Sbjct: 7 NDDGDENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G+ + +MR +GA IQI ++E+P C DELV I G+ +A + AL V+ ++LY
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVS----AFLY 122
Query: 509 RDFFQKETPPSSTGP 523
+ +++ P S P
Sbjct: 123 KHPPKEQIPWSLILP 137
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R++V+ +G L+GKGG I++MR E+ QI+I PR LP C +E+V + GD V
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQI-PRKDELPGCAFSFDELVVISGDAKAV 110
Query: 255 KNAVAIISSRL 265
K A+ +S+ L
Sbjct: 111 KKALYSVSAFL 121
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV--QIPAT--SQPSKEAAGSVSET 577
P + ++ I + D HQ Q P T Q + G
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPH-PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPL 239
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 240 HSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 295
Query: 638 SLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 296 KIANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 137/349 (39%), Gaps = 71/349 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDIT-----------NSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 148 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 298 NTAR--RPSMDGARFSGSNYRSNNY-GPRPSGYSIEAGAAPMS-----DSVQPFYGEDLV 349
+ + +M F+ + + G + +S E M D+ P +L
Sbjct: 208 QLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT 267
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 268 I----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
I NS + + + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 83 ITNSMSNSTATSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 138 LPNSTERAVTISGT 151
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 70/338 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ + V
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDISSSMTNSTATSK---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + E SP P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLE-------------QSP----PKGVTIPYR----PKPSGSPVIFAGG 193
Query: 314 N---YRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYGEDLVFR-----MLCPIDKVG 360
+ + P+P +++ P++ + Q F G D + M P D +G
Sbjct: 194 QAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIG 253
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PVDGS ++ +TI+
Sbjct: 254 CIIGRQGSKINEIRQMSGAQIKIANPVDGSADRQVTIT 291
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 137/329 (41%), Gaps = 52/329 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 66 ----------TAIFKAFSMIIDK-LEEDISSSMSNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + ++
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGTPLSIIE 157
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
+ + V ++ S + R G SP F Y + +P D +
Sbjct: 158 CVKQI--CVVMLESPPKGVTIPYRPKPSG---SPVTFAGGQAYAVQGQHAIPQP--DLTK 210
Query: 310 FSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGI 369
+ + + PS AG M + Q E + P D +G +IG
Sbjct: 211 LHQLAMQQSPFPLAPSSQGFTAG---MDATTQTGSHE-----LTIPNDLIGCIIGRQGAK 262
Query: 370 VELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS+++ +TI+
Sbjct: 263 INEIRQMSGAQIKIANPVEGSNDRQVTIT 291
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + SN+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMSNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 57/349 (16%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
A +Q+ + E +SGT D ++Q V +I ++EV ++ R +
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV---VMLEVQSKSPP---RGVSRVV 182
Query: 516 TPPSSTGPT----GSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSK 568
P ++ P G A ++ I D+T ++ Q P Q +
Sbjct: 183 APKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQL---------AMQQTPFPPLGQTNP 233
Query: 569 EAAGSVSETVKQNESERREDVPTVINRVPLPLVTRS----TLEVVLPDYAVPKLITKSKT 624
G+ VP V R P + S T E+ +P+ + +I + T
Sbjct: 234 AFPGT------------DRAVPFV--RSPWACLDASPPASTHELTIPNDLIGCIIGRQGT 279
Query: 625 LLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 280 KINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 328
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 127/341 (37%), Gaps = 58/341 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E V + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLP---NSTERAVTISGTPDA 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDR------FFPDDDYVPHMNNTARRPSMDG 307
+ V I + E Q + R+ +P F Y + P D
Sbjct: 155 IIQCVKQICVVMLEVQSKSPPRGVSRVVAPKPASTPVIFAGGQAYT--IQGQYAIPHPDL 212
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF----------RMLCPID 357
+ + + P A P +D PF + P D
Sbjct: 213 TKLHQLAMQQTPFPP----LGQTNPAFPGTDRAVPFVRSPWACLDASPPASTHELTIPND 268
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 269 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 309
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 58/344 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ + A +N+ E ERII I T
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITI--TGST 67
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
D R A +I ++ EE+ + G V
Sbjct: 68 DCVFR---------AFTMITHKL-------------EEDLAA---LVANGTISTKPPVTL 102
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+V+ G L+GKGG I+++R T QI++ LP +E V + G+ ++V
Sbjct: 103 RLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNS---TERGVTISGNQDSV 157
Query: 255 KNAVAIISSRLRES-------QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
V +I + + ES +R L + ++ F ++ H + + +D
Sbjct: 158 IQCVKLICTVILESPPKGATIPYRPSPSPAAVLIAGNQLFDASEFATHPMYSVAQGGLD- 216
Query: 308 ARFSGSNYRSNNYG------PRPSGYSIEAGAAPM---SDSVQPFYGED----LVFRMLC 354
+ N YG + S++ G P+ + +V P G D +L
Sbjct: 217 --LQQAYTLQNQYGIPHSELAKLHQLSMQQGLNPIAQPASTVIP-AGMDSNSQTSQELLI 273
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+ +DG+ ++ +TI+
Sbjct: 274 PNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 317
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 158/341 (46%), Gaps = 39/341 (11%)
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
G L R+L +VG +IG+ V+ ++ E + +++ E+IITI+ G
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE--GSCPERIITIT---GS 66
Query: 404 DDELFPAQEALLHIQTRIVDLGADKDN-------IITTRLLVPSSEIGCLEGRDGS-LSE 455
D +F A + H DL A N +T RL++P+S+ G L G+ G+ + E
Sbjct: 67 TDCVFRAFTMITHKLEE--DLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKE 124
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
+R STGA IQ+ + + +P + T+ V I G +D++++ + + + +
Sbjct: 125 IRESTGAQIQV-AGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILESPPKGA 176
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQS---VQIPATSQ-----PS 567
T P P+ +A+++ D + + T P + Q +Q T Q P
Sbjct: 177 TIPYRPSPSPAAVLIAGNQLFDAS-----EFATHPMYSVAQGGLDLQQAYTLQNQYGIPH 231
Query: 568 KEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLT 627
E A +++Q + + TVI + ++++ E+++P+ + +I + T +
Sbjct: 232 SELAKLHQLSMQQGLNPIAQPASTVI-PAGMDSNSQTSQELLIPNDLIGSIIGRQGTKIN 290
Query: 628 RFSEMSGASVSLVEGQPEGTQ-KIIQISGTPEQVERAQSVL 667
++SGA + + Q +GT + + I+GTP + AQ ++
Sbjct: 291 EIRQVSGAQIK-IGSQLDGTSDRHVTITGTPVSINLAQYLI 330
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 16/144 (11%)
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHI 417
+VG +IG+ ++L++++ G + ++D E+I+TI+ G ++ F A L
Sbjct: 12 EVGSIIGKRGDHIKLIRDQSGAKINISD--GSCPERIVTITGSTGTINKAFIMICAKLQ- 68
Query: 418 QTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEV 472
DL A ++I IT RL+VP+++ GC+ G+ GS + E+R +TGA+IQ+ S E +
Sbjct: 69 ----QDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVAS-EML 123
Query: 473 PACVSGTDELVQIVGEIQAARDAL 496
P S T+ V I G + D +
Sbjct: 124 P---SSTERAVTISGSADSIVDCM 144
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 76 NSIPKPP-----ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERA 130
Query: 126 IEIS 129
+ IS
Sbjct: 131 VTIS 134
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 135/348 (38%), Gaps = 59/348 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D++ EE+ R V
Sbjct: 67 A-----------IFKAFAMIIDKL-------------EEDISSSMTNSTAASR---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN-NTAR 301
+ V I + ES + + + + S F D PH +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVF 350
P ++G + P+P +++ PM+ F +
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 274
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + + G +K+A+PV+GS ++ +TI+
Sbjct: 275 ELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 87/344 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ +A+F I Y EE+ N A
Sbjct: 64 -------PT-----DAIFKAFAMI--------AYKFEEDIT-----------NSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ----HRDRSHFHGRLHSPDRFFPDDDYVPH 295
+ I+Q V I V ++ + + Q H D + H F P
Sbjct: 151 TPDAIIQCVKQI-----CVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTT-- 203
Query: 296 MNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P+ G + S+ + N + SG D+ P +L
Sbjct: 204 -------PAFPGEKLPLHSSEEAQNLMGQSSGL----------DASPPASTHELTI---- 242
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 243 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 286
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 90/354 (25%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYL-------- 507
A +Q+ + E +SGT D ++Q V +I ++E T Y
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV---VMLEAYTIQGQYAIPHPDLTK 185
Query: 508 YRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTV--------TDPPAATHQSVQ 559
++TP + G T A E + + + E Q + PPA+TH
Sbjct: 186 LHQLAMQQTPFTPLGQTTPAFPGEK---LPLHSSEEAQNLMGQSSGLDASPPASTH---- 238
Query: 560 IPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLI 619
E+ +P+ + +I
Sbjct: 239 -----------------------------------------------ELTIPNDLIGCII 251
Query: 620 TKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 252 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 305
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
I NS + + + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 83 ITNSMSNSTATSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 138 LPNSTERAVTISGT 151
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 334 APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
AP S+ P + D VFR++ P+ KVG +IG +++ + E ++V D G+ ++
Sbjct: 64 APASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDR 123
Query: 394 I---------------------ITISSEEGPDDELFPAQEALLHIQTRIVDLGADK---- 428
I + IS E P+ L PA +A++ + R+ L +
Sbjct: 124 IGXMEKKMLSVLLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGL 183
Query: 429 -DNIIT-TRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTDELVQIV 486
D + T + +S + GS + + + +L + EVP + + +V++
Sbjct: 184 FDQVNTGEHWCICASTVRSWFAHFGSKFQNLXAFSXEVYLLXQNEVPFYAAADERIVELQ 243
Query: 487 GEIQAARDALVEVTTRLRSYL 507
GE + AL V LR +L
Sbjct: 244 GEALKVQKALEAVVGHLRKFL 264
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 168/394 (42%), Gaps = 64/394 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 133 RILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPENCTN 189
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ E +++ + G ++ Y + +++
Sbjct: 190 ACKRILE--------VMQQEANNTNKGYAKKYY---------------YEICLKILAHNN 226
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ ET T+I + S+ S + E I+ V G I+N+ A A
Sbjct: 227 LIGRIIGKGGNTIKRIMQETDTKITV----SSINDINSFNLERIITVKGAIDNMSRAEAQ 282
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
IS++LR+S D P P ++ A + G + GS
Sbjct: 283 ISAKLRQSYENDLQAMA----------PQTMMFPGLHPMAMMAT-AGIGY-GSRGLYTGQ 330
Query: 321 GPRPSGYSIEAGAAP-MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P P Y AGAA DS + Y + P + VG +IG + + G
Sbjct: 331 APYPGMY--PAGAAQGGGDSQETTY-------LYIPNNAVGAIIGTKGSHIRNIIRFSGA 381
Query: 380 DLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-IT 433
+K+A P + +E+ +TI G + + AQ L+ + R A D++ +T
Sbjct: 382 SVKIAPIDETKPQETQNERRVTIV---GSPEAQWKAQY-LIFEKMREEGFVAGSDDVRLT 437
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
++VPSS++G + G+ G ++ E++R TG+ I++
Sbjct: 438 VEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKL 471
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 180
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV--QIPAT--SQPSKEAAGSVSET 577
P + ++ I + D HQ Q P T Q + G
Sbjct: 181 KPASTPVIFAGGQAYTIQGQYAIPH-PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPL 239
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
E++ + ++ P ST E+ +P+ + +I + T + +MSGA +
Sbjct: 240 HSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 295
Query: 638 SLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +++ I I+GTP + AQ ++ + S
Sbjct: 296 KIANATEGSSERQITITGTPANISLAQYLINARLTS 331
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 137/349 (39%), Gaps = 71/349 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + + +P F Y +PH +
Sbjct: 148 ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 298 NTAR--RPSMDGARFSGSNYRSNNY-GPRPSGYSIEAGAAPMS-----DSVQPFYGEDLV 349
+ + +M F+ + + G + +S E M D+ P +L
Sbjct: 208 QLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELT 267
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 268 I----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 141/354 (39%), Gaps = 87/354 (24%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDI---------- 115
Query: 184 GFRGGGNRVAT-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
N AT R+VV G L+GKGG I+++R T Q+++ LP +
Sbjct: 116 -INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--N 172
Query: 233 SLPRCVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ----HRDRSHFHGRLHSPDR 285
S R V++S + I+Q V I V ++ + + Q H D + H
Sbjct: 173 STERAVTISGTPDAIIQCVKQI-----CVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTP 227
Query: 286 FFPDDDYVPHMNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY 344
F P + T P+ G + S+ + N + SG D+ P
Sbjct: 228 F-------PPLGQT--NPAFPGEKLPLHSSEEAQNLMGQSSGL----------DASPPAS 268
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 269 THELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 318
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 139/354 (39%), Gaps = 90/354 (25%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYL-------- 507
A +Q+ + E +SGT D ++Q V +I ++E T Y
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV---VMLEAYTIQGQYAIPHPDLTK 217
Query: 508 YRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTV--------TDPPAATHQSVQ 559
++TP G T A E + + + E Q + PPA+TH+
Sbjct: 218 LHQLAMQQTPFPPLGQTNPAFPGEK---LPLHSSEEAQNLMGQSSGLDASPPASTHE--- 271
Query: 560 IPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLI 619
+ +P+ + +I
Sbjct: 272 ------------------------------------------------LTIPNDLIGCII 283
Query: 620 TKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 284 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 337
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 137/329 (41%), Gaps = 52/329 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 66 ----------TAIFKAFSMIIDK-LEEDISSSMSNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + ++
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGTPLSIIE 157
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
+ + V ++ S + R G SP F Y + +P D +
Sbjct: 158 CVKQI--CVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIPQP--DLTK 210
Query: 310 FSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGI 369
+ + + PS AG M + Q E + P D +G +IG
Sbjct: 211 LHQLAMQQSPFPLAPSSQGFTAG---MDATTQTGSHE-----LTIPNDLIGCIIGRQGAK 262
Query: 370 VELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS+++ +TI+
Sbjct: 263 INEIRQMSGAQIKIANPVEGSNDRQVTIT 291
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + SN+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMSNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 276
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 277 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPPHQ 308
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 309 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 353
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 354 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 410 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 465
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 186
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 187 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD---------F 511
G I I S +++ + + + + G ++A +A VE+ +LR D +
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 299
Query: 512 FQKETPPSSTGP 523
F PP GP
Sbjct: 300 FSSLYPPHQFGP 311
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 129 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 182
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 183 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 215
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 216 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 271
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 272 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPPHQ 303
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 304 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 348
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 349 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 404
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 405 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 460
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 181
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 182 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 236
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD---------F 511
G I I S +++ + + + + G ++A +A VE+ +LR D +
Sbjct: 237 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 294
Query: 512 FQKETPPSSTGP 523
F PP GP
Sbjct: 295 FSSLYPPHQFGP 306
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE---RIIEISDTRRRDPEG 138
+I + K G VIGK+G I++++ +GA I + + I D R +E+ T
Sbjct: 147 KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGS---- 202
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+A LI I E++ GG GF G G G F
Sbjct: 203 -------VDKAEQLIKSVIAEAEAGGSPALIARGF---------GSGQPGSEQFE----- 241
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
M V VG ++GKGG+ I+ M+ ++ +I+++P+ P V+++E IV+V G+
Sbjct: 242 ----MTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQH--PPEGVTLTERIVRVTGNK 295
Query: 252 NNVKNAVAIISSRLRE--SQHRDRSHFHG 278
++ A +I + + S+H ++S +G
Sbjct: 296 KQIEAAKDLIKQAMNQTFSKHTNQSGGYG 324
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 61/382 (15%)
Query: 336 MSDSVQPFYGED-------------LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLK 382
+S +QP +G L R+L +VG +IG+ V+ ++ E G +
Sbjct: 21 LSHHLQPHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 80
Query: 383 VADPVDGSDEQIITISSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLL 437
+++ E+I+TI+ GP D +F A + + I + + A +T RL+
Sbjct: 81 ISE--GNCPERIVTIT---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLV 135
Query: 438 VPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDAL 496
VP+S+ G L G+ GS + E+R STGA +Q+ + + +P + T+ V I G DA+
Sbjct: 136 VPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISG----TPDAI 187
Query: 497 VEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEA----ASPIDITPARE--------- 543
++ ++ + + T P P + ++ A P+ + A
Sbjct: 188 IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPL 247
Query: 544 -VQTVTDPPAATH-----------QSVQIPATSQPSKEAAGSVSETVKQNESERREDVPT 591
T+ A H Q P Q + G E++ +
Sbjct: 248 PAYTIQGQYAIPHPELTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSS 307
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
++ P ST E+ +P+ + +I + T + +MSGA + + +++ I
Sbjct: 308 GLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 363
Query: 652 QISGTPEQVERAQSVLQGFILS 673
I+GTP + AQ ++ + S
Sbjct: 364 TITGTPANISLAQYLINARLTS 385
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 42 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 95
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 96 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 124
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 125 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 182
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 183 TPDAIIQCVKQICVV 197
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 43/209 (20%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE---RIIEISDTRRRDPEG 138
+I + K G VIGK+G I++++ +GA I + + I D R +E+ T
Sbjct: 147 KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGS---- 202
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+A LI I E++ GG GF G G G F
Sbjct: 203 -------VDKAEQLIKSVIAEAEAGGSPALIARGF---------GSGQPGSEQFE----- 241
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
M V VG ++GKGG+ I+ M+ ++ +I+++P+ P V+++E IV+V G+
Sbjct: 242 ----MTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQH--PPEGVTLTERIVRVTGNK 295
Query: 252 NNVKNAVAIISSRLRE--SQHRDRSHFHG 278
++ A +I + + S+H ++S +G
Sbjct: 296 KQIEAAKDLIKQAMNQTFSKHTNQSGGYG 324
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 130 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 183
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 184 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 216
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 217 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGAVEACASAEV 272
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D H + + +P +N +A
Sbjct: 273 EIMKKLREAFENDMLAVHQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 322
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 323 APPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 367
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 368 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 423
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 424 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 482
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 483 TPD--ENEEVIVRIIGHFFASQTA 504
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 100
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 194
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EE 123
R S + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ E
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPE 88
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG 183
RI+ I+ +A+F I Y EE+
Sbjct: 89 RIVTITG---------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA- 124
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVS 239
V R+VV G L+GKGG I+++R T Q+++ LP +S R V+
Sbjct: 125 ---TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVT 179
Query: 240 MS---EEIVQVVGDINNV 254
+S + I+Q V I V
Sbjct: 180 ISGTPDAIIQCVKQICVV 197
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 120 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 173 STERAVTISGT 183
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 175/434 (40%), Gaps = 79/434 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 276
Query: 260 IISSRLRESQHRDRSHFHGR--------LHSPDRFFPDDDYVP-------HMNNTARRPS 304
I +LRE+ D + + L + F +P P
Sbjct: 277 EIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPF 336
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
+ + S Y + +GP P +S Y E + + P VG +IG
Sbjct: 337 ATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIG 381
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIV 422
+ ++ L G +K+A P +G D E+++ I+ GP + F AQ +
Sbjct: 382 KKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEEN 437
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE 481
++ + + VPSS G + G+ G +++E++ T A + I+ R++ P +
Sbjct: 438 FFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEV 494
Query: 482 LVQIVGEIQAARDA 495
+V+I+G A++ A
Sbjct: 495 IVRIIGHFFASQTA 508
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 186
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 187 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
G I I S +++ + + + + G ++A +A VE+ +LR D
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML 291
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 133/341 (39%), Gaps = 67/341 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ N A
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDIS----------SSMTNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAIT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTAR 301
+ G ++ V I + ES + R G SP F Y +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIP 204
Query: 302 RPSMDGARFSGSNYRSNNYG----PRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPID 357
+P A S + + P P G + M S Q E M P D
Sbjct: 205 QPDSSSASISPQLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSSHE-----MTIPND 259
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 260 LIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVTIT 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 131/358 (36%), Gaps = 68/358 (18%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + I + I
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSIIE 157
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDY--------VPHMN-NTARRPS 304
+ ++ + RL S +P D Y PH + P
Sbjct: 158 CVKQICVVMLEVSPQAPPKLQCIPWRLKS--SIYPQDRYSTGSDSASFPHTTPSMCLNPD 215
Query: 305 MDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG-------------- 345
++G + P+P +++ PM+ F G
Sbjct: 216 LEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAG 275
Query: 346 -----EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 276 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 193
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 194 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 227 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 282
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 283 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPTGPRG 332
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 333 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 377
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 378 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 433
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 434 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 492
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 493 TPD--ENEEVIVRIIGHFFASQTA 514
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 192
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 193 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
G I I S +++ + + + + G ++A +A VE+ +LR D
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML 297
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 134/337 (39%), Gaps = 68/337 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ N A
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDIS----------SSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAIT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTAR 301
+ G ++ V I + ES + R G SP F Y +
Sbjct: 148 IAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIP 204
Query: 302 RPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGR 361
+P D + + + + PS AG M S Q E + P D +G
Sbjct: 205 QP--DLTKLHQLAMQQSPFPLAPSSQGFTAG---MDASAQTGSHE-----LTIPNDLIGC 254
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 255 IIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTIT 291
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + SN+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMSNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 138/344 (40%), Gaps = 87/344 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMI--------AYKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQ----HRDRSHFHGRLHSPDRFFPDDDYVPH 295
+ I+Q V I V ++ + + Q H D + H F P
Sbjct: 151 TPDAIIQCVKQI-----CVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPF-------PP 198
Query: 296 MNNTARRPSMDGARFS-GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+ T P+ G + S+ + N + SG D+ P +L
Sbjct: 199 LGQT--NPAFPGEKLPLHSSEEAQNLMGQSSGL----------DASPPASTHELTI---- 242
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 243 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 286
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 139/354 (39%), Gaps = 90/354 (25%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYL-------- 507
A +Q+ + E +SGT D ++Q V +I ++E T Y
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICV---VMLEAYTIQGQYAIPHPDLTK 185
Query: 508 YRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTV--------TDPPAATHQSVQ 559
++TP G T A E + + + E Q + PPA+TH+
Sbjct: 186 LHQLAMQQTPFPPLGQTNPAFPGEK---LPLHSSEEAQNLMGQSSGLDASPPASTHE--- 239
Query: 560 IPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLI 619
+ +P+ + +I
Sbjct: 240 ------------------------------------------------LTIPNDLIGCII 251
Query: 620 TKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 252 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 305
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|302839775|ref|XP_002951444.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
gi|300263419|gb|EFJ47620.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
Length = 1261
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 339 SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
S +P + + FR+LC + G VIG+ V ++ G ++ V P+ G ++I I
Sbjct: 54 SEKPAVPKGIHFRLLCHEGQAGAVIGKGGDTVRNIRKNSGAEVSVQPPIQGHRLRVIIID 113
Query: 399 SEEG----PDDELFPAQEALLHIQTRIVD----LGA-DKDNIITTRLLVPSSEIGCLEG- 448
S G P +PA+EALL V+ L A D ++ RLLV S+ L G
Sbjct: 114 SSPGNRAVPS---YPAKEALLTCAMLTVEGDQPLNAPDPSKLVDVRLLVHSALAAGLLGL 170
Query: 449 --RDGSLS--EMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
GSL+ ++ GAN+ I E P +E + + G A AL V +R
Sbjct: 171 KHSHGSLAAGDISARCGANVIIPGEAERPKLAEADEEYLLLRGPWPAVYAALGMVADEVR 230
Query: 505 SYLYRDFFQKETP 517
R FF+ P
Sbjct: 231 ----RQFFELRDP 239
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 25 TKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNP------KDPSLMVT 78
TKP+ Q + + GN T + ++ N + P++
Sbjct: 5 TKPQQAQKAQ--DTQKQNGNEKEKTGGASTQGLAKRKPQDKDNKEKAKRRRSEKPAVPKG 62
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
+R+LCH+ +AG VIGK G +++IR+++GA ++V I G R+I I + P
Sbjct: 63 IHFRLLCHEGQAGAVIGKGGDTVRNIRKNSGAEVSVQPPIQGHRLRVIIIDSS----PGN 118
Query: 139 R-MPSFSPAQEALFLIHDRILESD 161
R +PS+ PA+EAL +E D
Sbjct: 119 RAVPSY-PAKEALLTCAMLTVEGD 141
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 30/240 (12%)
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTG-AWINVHELIPGDEERIIEISDTR 132
S + TY+++ + KAG IGK G ++ +R G + + VH + R++E+S T
Sbjct: 340 STPIAVTYKLVVPESKAGRFIGKGGENLRDMRLALGLSTLKVHPAVKDTSVRVLEVSST- 398
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
E + A +AL +R+ G+ + G GG RG R+
Sbjct: 399 ----EPAASNRCAAADALLYYVERL----------GQNTPQ-------GAGGNRG---RI 434
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
+M++ + H G ++G +I Q+ TK ++ + +P + ++ ++ GD
Sbjct: 435 TIKMLLQQQHCGPVVGPRAAVIRQISALTKASC-VVHKKGDVPPYGAPDDQELEAEGDAQ 493
Query: 253 NVKNAVAIISSRLRESQHRDRSHFHGR--LHSPDRFFPDDDYVPHMN-NTARRPSMDGAR 309
+V A+ I+++ +R + R + R L +P+ + PH +TA P + R
Sbjct: 494 HVFEAIRIVAAIVRGCELRRQGQIAVRETLGTPEFDIVRGNIPPHAAPHTAMGPMVSATR 553
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 174/428 (40%), Gaps = 67/428 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G IK++ + T + +++H + G E+ I I T PEG
Sbjct: 118 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHAT----PEG-- 171
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I D I++ + EE + +++
Sbjct: 172 -----CSEACRMILD-IMQKEADETKSAEE---------------------IPLKILAHN 204
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G A
Sbjct: 205 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQD---LTIYNPERTITVKGSTEACSKAQVE 261
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA---------RRPSMDGARFS 311
I +LRE+ D + + + +P +N A PS GAR +
Sbjct: 262 IMKKLREAYENDVVAVNQQ----------ANLIPGLNLNALGIFSTGLSMLPSTPGARGA 311
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSD-SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
+ + + + S GA P S Q E V + P VG +IG+ +
Sbjct: 312 AAATPYHPFASSSAYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHI 371
Query: 371 ELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK 428
+ L G +K+A P +G D E+++ I+ GP + F AQ + +
Sbjct: 372 KQLARFAGASIKIA-PAEGPDASERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKE 427
Query: 429 DNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
+ + + VPS G + G+ G +++E++ T A + I+ R++ P + +V+I+G
Sbjct: 428 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVKIIG 484
Query: 488 EIQAARDA 495
A++ A
Sbjct: 485 HFFASQTA 492
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 152/347 (43%), Gaps = 37/347 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 143
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 144 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 203
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 204 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 255
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV--- 578
P + ++ I + + P H Q A Q +K ++ +T
Sbjct: 256 KPASTPVIFAGGQAYTI---QGQYAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQTPFPP 312
Query: 579 --KQNESERREDVPTVINRVPLPLVTRS----------TLEVVLPDYAVPKLITKSKTLL 626
+ N + E +P + L+ +S T E+ +P+ + +I + T +
Sbjct: 313 LGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 372
Query: 627 TRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 373 NEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 419
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 137/355 (38%), Gaps = 70/355 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 85 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 138
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 139 ------------PTDAIFKAFAMI--------AYKFEEDIINSMSNSPA----TSKPPVT 174
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E V + G +
Sbjct: 175 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVTISGTPDA 229
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDY-------VPHMNNTAR--- 301
+ V I + ES + + + +P F Y +PH + A
Sbjct: 230 IIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLY 289
Query: 302 RPS--MDGARFSGSNYRSNNYGP------------RPSGYSIEA----GAAPMSDSVQPF 343
+PS + + + + P P S EA G +P D+ P
Sbjct: 290 QPSAILQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPA 349
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+L P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 350 STHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 400
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 163 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 215
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 216 STERAVTISGT 226
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 70/337 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + ES P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLESP------------------PKGVTIPYRP----KPSSSPVIFAGG 192
Query: 314 NYRS-------NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR-----MLCPIDKVGR 361
++ P G + +G S V+ ++G D + + P D +G
Sbjct: 193 QLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGC 252
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 253 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 289
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 46/223 (20%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDTRR---------------RDPEGRM------PSFSP---AQ 147
V +++P ER I I+ + P+G PS SP A
Sbjct: 132 QVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG 191
Query: 148 EALFLIHDRILE------SDGGGGFYGEEEE--EYGGGGGVGGGGFRGGGNRVATRMVVS 199
L +H ++ + G GF G E E G G + + +
Sbjct: 192 GQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK-----GYWGLDASAQTTSHELTIP 246
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLPRCVSMS 241
+GC++G+ G I ++R + QI+I P + S R V+++
Sbjct: 247 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 289
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 143/359 (39%), Gaps = 72/359 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP-----FY 344
P +D G + S N + S +++ G + DS P +
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 345 GEDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G D + + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 273 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 331
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 131/330 (39%), Gaps = 54/330 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ S + +I LE D V
Sbjct: 64 -------PTTSIFKAFSMIIEK--LEEDISNSMTNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R Q+++ LP +E + V G +
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNS---TERAITVAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGA 308
+ V I + ES + R G SP F Y + +P +
Sbjct: 155 IIECVKQICIVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIPQPDL--- 208
Query: 309 RFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
+ + + P P +S + A M S Q E + P D +G +IG
Sbjct: 209 --TKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHE-----LTIPNDLIGCIIGRQGA 261
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS ++ +TI+
Sbjct: 262 KINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTSI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + A +T RL+VP+S+ G L G+ G + E+R S G
Sbjct: 69 FKAFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + + G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITVAGTPQ----SIIECVKQICIVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
I+NS + + K P T R++ + G +IGK G IK IR+ GA + V ++
Sbjct: 83 ISNSMTNSTATSKPP-----VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDM 137
Query: 118 IPGDEERIIEISDT 131
+P ER I ++ T
Sbjct: 138 LPNSTERAITVAGT 151
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEA 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 133/360 (36%), Gaps = 71/360 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFP----------DDDYVPHMN-NTARR 302
+ V I + ES + + S F D PH +
Sbjct: 155 IIECVKQICVVMLESPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLN 214
Query: 303 PSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG------------ 345
P ++G + P+P +++ PM+ F G
Sbjct: 215 PDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW 274
Query: 346 -------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 AGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 129 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 182
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 183 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 215
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 216 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 271
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 272 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 321
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 322 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 366
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 367 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 422
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 423 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 481
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 482 TPD--ENEEVIVRIIGHFFASQTA 503
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 181
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 182 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 236
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
G I I S +++ + + + + G ++A +A VE+ +LR D
Sbjct: 237 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML 286
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQIL-----SREEVPACVSGTDE-LVQIVGEI 489
A +Q+ + E +SGT E ++Q V +I
Sbjct: 131 AQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQI 164
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 66 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA----TSKPPVT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNV 254
V I V
Sbjct: 160 CVKQICVV 167
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 145/363 (39%), Gaps = 77/363 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 22 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 78
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 79 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 111
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 112 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 169
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 170 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 226
Query: 302 RPSMDGARFSGSNYRSNNYGPRP---------------------SGYSIEAGAAPMSDSV 340
P ++G + P+P +G+S G S V
Sbjct: 227 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS---GIESSSPEV 283
Query: 341 QPFYGEDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ ++G D + + P D +G +IG + ++ G +K+A+PV+GS ++ +
Sbjct: 284 KGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 343
Query: 396 TIS 398
TI+
Sbjct: 344 TIT 346
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 80
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 81 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 140
Query: 462 ANIQI 466
A +Q+
Sbjct: 141 AQVQV 145
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 91 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 143
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 144 QVAGDMLPNSTERAITIA 161
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPPHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 249
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 250 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD---------F 511
G I I S +++ + + + + G ++A +A VE+ +LR D +
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGY 362
Query: 512 FQKETPPSSTGP 523
F PP GP
Sbjct: 363 FSSLYPPHQFGP 374
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 130/337 (38%), Gaps = 68/337 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A+F I+E + EE+ N A
Sbjct: 64 ------------PTTAIFKAFSMIIE---------KLEEDIS----------SSMTNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAIT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTAR 301
+ G ++ V I + ES + R G SP F Y +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIP 204
Query: 302 RPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGR 361
+P + GP G+ A+ + S M P D +G
Sbjct: 205 QPDLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSS----------HEMTIPNDLIGC 254
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 255 IIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVTIT 291
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T R++VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 47/245 (19%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T RI+ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTATSKPP-------VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT--------------------------RRRDPEGRMPSFSP 145
V +++P ER I I+ T R P G F+
Sbjct: 132 QVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAG 191
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT----RMVVSRM 201
Q I + D + ++ G GF+GG + A M +
Sbjct: 192 GQAYAVQGQHAIPQPD-LTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTSSHEMTIPND 250
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+GC++G+ G I ++R + QI+I P + S R V+ + G ++ A +
Sbjct: 251 LIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVT-------ITGSAASISLAEYL 303
Query: 261 ISSRL 265
I++RL
Sbjct: 304 INARL 308
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 168/418 (40%), Gaps = 74/418 (17%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI--IEISDTRRRDPEGRMPSFSPAQE 148
G +IG+ G+ I++I Q + A ++VH +E + +E S T +PE + +
Sbjct: 88 GAIIGRQGTTIRTITQQSRARVDVHR-----KENVGSLEKSITIYGNPEN---CTNACKR 139
Query: 149 ALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLG 208
L ++ L ++ G + +++ +G ++G
Sbjct: 140 ILEVMQQEALSTNKG---------------------------EICLKILAHNNLIGRIIG 172
Query: 209 KGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAIISSRLRE 267
K G I+++ +T T+I + S+ S + E I+ V G I N+ A IS++LR+
Sbjct: 173 KSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQ 228
Query: 268 SQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGY 327
S D P P ++ A + G+ N P PS
Sbjct: 229 SYENDLQAMA----------PQSLMFPGLHPMAMMST------PGNGMVFNTSMPFPSCQ 272
Query: 328 SIEAGAAPMSDSVQPFYGEDL--VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA- 384
S P S V P + D+ + P + VG +IG + + LK+A
Sbjct: 273 SFAMSKTPAS-VVPPAFPNDMQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAP 331
Query: 385 ----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPS 440
P+D E+ +TI G + + AQ + + D +T LLV S
Sbjct: 332 LDADKPLDQQTERKVTIV---GTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVAS 388
Query: 441 SEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDEL--VQIVGEIQAARDA 495
S++G + G+ G ++ E++R TG+ I++ P SG DE V I+G + + A
Sbjct: 389 SQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPP--SGGDEETPVHIIGPFYSVQSA 444
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 43/195 (22%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDE--ER 124
P P+ M TT+ + ++ G +IG GS I+SI + + A + + L P D+ ER
Sbjct: 286 PAFPNDMQETTFLYIPNN-AVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTER 344
Query: 125 IIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGG 184
+ I T PEG+ +A ++I +++ E G
Sbjct: 345 KVTIVGT----PEGQW-------KAQYMIFEKMREE-----------------------G 370
Query: 185 FRGGGN--RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
F G + R+ ++V+ VG ++GKGG+ + +++ T + I+ LP P E
Sbjct: 371 FMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEE 429
Query: 243 EIVQVVGDINNVKNA 257
V ++G +V++A
Sbjct: 430 TPVHIIGPFYSVQSA 444
>gi|3548819|gb|AAC34491.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 155
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 112 INVHELIPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYG 168
+ V+E +PG +ER++ I S+ R R + PA +ALF +HD ++ +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 169 EEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL 228
+ +EY G V V RM+V +G L+GKGG II+ +R +T QIR+
Sbjct: 61 NDNDEYSEGQTV-----------VTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV- 108
Query: 229 PRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
R+ +LP C + I+ V ++ +K V
Sbjct: 109 -RNDNLPMCTEKARTILMVQRNLLGMKTMV 137
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 381 LKVADPVDGSDEQIITISS--------EEGPDDELFPAQEALLHIQ-------------T 419
++V + + G DE+++TI S E+ +D + PA +AL +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 420 RIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MRRSTGANIQILSREEVPACVSG 478
D ++ ++T R+LVPS +IG L G+ G + + +R T A I++ + +P C
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEK 119
Query: 479 TDELVQI 485
++ +
Sbjct: 120 ARTILMV 126
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 140/329 (42%), Gaps = 45/329 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 44 TLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGI-------- 95
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ +A L+ D +++ G GG N R+++S
Sbjct: 96 ---LNGIADAYGLVADCLVKGAPQMGI---------------GGSVAAAPNTHPIRLLIS 137
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G + ++ AV
Sbjct: 138 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPDGIQKAVW 192
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF-----SGSN 314
I L + + R + L+SP +N T + R +G++
Sbjct: 193 EIGKCLVDDEQRG---YGTVLYSPSVRVGGGAPAAPLNGTGESRGYNAPRSYNRTGNGAD 249
Query: 315 YRSN---NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGESEGIV 370
+ S +Y PR +G S E G + GED+ + + P D VG +IG +
Sbjct: 250 FTSGAPASYPPRRNGAS-EGGGGGSGPPPRVEEGEDIQTQNISIPADMVGCIIGRGGSKI 308
Query: 371 ELLQNEIGVDLKVAD-PVDGSDEQIITIS 398
++ G + +A P D + E++ TI+
Sbjct: 309 SEIRKSSGARISIAKAPHDDTGERMFTIT 337
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 41/336 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
F A + D+G I RL+VP+S+ G L G+ GS + E+R++TG +IQ+
Sbjct: 79 FSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 467 LSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
S E +SG+ E QI I ++E R + YR P T
Sbjct: 139 ASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPRGATIPYRP------KPQVT 190
Query: 522 GPT----GSALVVEAASPIDITPAREVQTVTDPPAATHQSVQI---PATSQPSKEAAGSV 574
GP G A ++ + P +EV +P A+ PA++ +
Sbjct: 191 GPVILANGQAFTIQGNYAV---PTQEV--AKNPLASLAALGLAGMNPASTGGINHTGSAP 245
Query: 575 SETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSG 634
+ S+ R P NR + E+ + + + +I K T + ++SG
Sbjct: 246 AALAALAGSQLRTANPA--NR-----AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISG 298
Query: 635 ASVSLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
A + + E + T + I ISG P+ V AQ ++
Sbjct: 299 AMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 334
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + EE
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKKF--------------EE 91
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G VG ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 92 FNDVGKVGK-------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 144
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 145 --NSTERAVTLSGSAEQITQCIYQI 167
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPPHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 249
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 250 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD---------F 511
G I I S +++ + + + + G ++A +A +E+ +LR D +
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGY 362
Query: 512 FQKETPPSSTGP 523
F PP GP
Sbjct: 363 FSSLYPPHQFGP 374
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 47/341 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E + V++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSE--GNCPERIVTIT---GPTDAI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQIL-----SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
A +Q+ + E +SGT E + IQ + V E+
Sbjct: 131 AQVQVAGDMLPNSTERAVTISGTPEAI-----IQCVKQICV--------------VMLES 171
Query: 517 PPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVS- 575
PP G T A +P+ + + PA + S+ + P+ G +
Sbjct: 172 PPK--GATIPYRPKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAI 229
Query: 576 ---ETVKQNESERREDVPTVINRV--PLPLV----TRSTLEVVLPDYAVPKLITKSKTLL 626
+ K ++ ++ T + + P V ST E+ +P+ + +I + T +
Sbjct: 230 PHPDLTKLHQLAMQQTPFTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKI 289
Query: 627 TRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+MSGA + + + + I I+GTP + AQ ++
Sbjct: 290 NEIRQMSGAQIKIANAMEGSSDRQITITGTPANISLAQYLI 330
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 138/371 (37%), Gaps = 112/371 (30%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ + A INV E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSE---GNCPERIVTITG--- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 66 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSQA----TSKPPVT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ A P +
Sbjct: 160 CVKQICVV------------------------MLESP----PKGATIPYRPKPATAPVI- 190
Query: 307 GARFSGSNYRSNN--------------YGPRPSGYSIEAGAA------------------ 334
FSG R++ + P P+ Y+I+ A
Sbjct: 191 ---FSGGQVRADTLTAPATANLSLLLQHQPLPA-YTIQGQYAIPHPDLTKLHQLAMQQTP 246
Query: 335 --PMSDSVQPFYGEDL-----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPV 387
+ + F G D + P D +G +IG + ++ G +K+A+ +
Sbjct: 247 FTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM 306
Query: 388 DGSDEQIITIS 398
+GS ++ ITI+
Sbjct: 307 EGSSDRQITIT 317
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN++A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSQATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDTI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + EMR STG
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130
Query: 462 ANIQIL-----SREEVPACVSGTDE-LVQIVGEI 489
A +Q+ + E +SGT E ++Q V +I
Sbjct: 131 AQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQI 164
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 135/369 (36%), Gaps = 109/369 (29%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 12 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTIT---- 64
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F + + I+ S + V
Sbjct: 65 -GPTDTI--FKAFAMIAYKFEEDIINSMSNSPATSKPP--------------------VT 101
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I++MR T Q+++ LP +S R V++S E I+Q
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLP--NSTERAVTISGTPEAIIQ 159
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMD 306
V I V L SP P +P+ A P +
Sbjct: 160 CVKQICVV------------------------MLESP----PKGATIPYRPKPASTPVI- 190
Query: 307 GARFSGSNYRSNNYGP------------RPSGYSIEAGAA-------------------- 334
FSG + + Y+I+ A
Sbjct: 191 ---FSGGQVSAELLKTTLTPNLTLLMQQKCPAYTIQGQYAIPHPDLTKLHQLAMQQTPFT 247
Query: 335 PMSDSVQPFYGEDLV-----FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
P+ + F G D + P D +G +IG + ++ G +K+A+ ++G
Sbjct: 248 PLGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEG 307
Query: 390 SDEQIITIS 398
S E+ ITI+
Sbjct: 308 SSERQITIT 316
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK +R+ TGA + V +++P
Sbjct: 90 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN 142
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 143 STERAVTISGT 153
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 176 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 229
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 230 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 262
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 263 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 318
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 319 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 368
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 369 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 413
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 414 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 469
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 470 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 528
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 529 TPD--ENEEVIVRIIGHFFASQTA 550
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 140/348 (40%), Gaps = 59/348 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVF 350
P ++G + P+P +++ PM+ F +
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 274
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 140/348 (40%), Gaps = 59/348 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVF 350
P ++G + P+P +++ PM+ F +
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 274
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 145/363 (39%), Gaps = 77/363 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRP---------------------SGYSIEAGAAPMSDSV 340
P ++G + P+P +G+S G S V
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS---GIESSSPEV 271
Query: 341 QPFYGEDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ ++G D + + P D +G +IG + ++ G +K+A+PV+GS ++ +
Sbjct: 272 KGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 331
Query: 396 TIS 398
TI+
Sbjct: 332 TIT 334
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 93/189 (49%), Gaps = 34/189 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEG 138
++L +++ AG VIGK GSII SI TG + + + P +ER++ + G
Sbjct: 22 KLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLC--------G 73
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
++ ++AL +I D+I E + E++ G + R+VV
Sbjct: 74 KIDQI---KDALLIILDKIKEV---ANQHSHEKQNMMNGAA-----------KYTCRIVV 116
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+ V ++GKGG+ I+Q++ T ++I+I R+ L +E I+ ++G ++++
Sbjct: 117 PKSAVSAIIGKGGQQIKQLQDSTGSKIQISSREDGL------NERIITIIGSFESIRDTA 170
Query: 259 AIISSRLRE 267
+++ +++
Sbjct: 171 LKVANSIQK 179
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 28/176 (15%)
Query: 345 GEDLVFRMLCPIDKV-GRVIGESEGIVELLQNEIGVDLKVA---DPVDGSDEQIITISSE 400
G L F L + V G VIG+ I+ ++N+ G LK++ + E+++ +
Sbjct: 15 GNQLCFVKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLC-- 72
Query: 401 EGPDDELFPAQEALLHIQTRIVDLG----ADKDNII------TTRLLVPSSEIGCLEGRD 450
G D++ ++ALL I +I ++ +K N++ T R++VP S + + G+
Sbjct: 73 -GKIDQI---KDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSAIIGKG 128
Query: 451 GS-LSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLR 504
G + +++ STG+ IQI SRE+ G +E ++ I+G ++ RD ++V ++
Sbjct: 129 GQQIKQLQDSTGSKIQISSRED------GLNERIITIIGSFESIRDTALKVANSIQ 178
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 139/382 (36%), Gaps = 118/382 (30%)
Query: 69 NPKDPS-----LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
NPKD L VT T R+L H + G +IGK G +K +R+ +GA IN+ E E
Sbjct: 2 NPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPE 59
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGV 180
RI+ I+ +A+F I E D
Sbjct: 60 RIVTITG---------------PTDAIFKAFSMIALKFEEDINASMTNSSVTSK------ 98
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPR 236
V R+VV G L+GKGG I+++R T Q+++ LP +S R
Sbjct: 99 ---------PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 147
Query: 237 CVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV 293
V++S + I+Q V I V L SP P +
Sbjct: 148 AVTISGTPDAIIQCVKQICVV------------------------MLESP----PKGATI 179
Query: 294 PHMNNTARRPSMDGARFSGSNYRSNNY-----------GPRPS-GYSIEAGAA------- 334
P+ A P + F+G R++ P+P+ ++I+ A
Sbjct: 180 PYRPKPASAPII----FAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLT 235
Query: 335 -------------PMSDSVQPFYGEDLV-----FRMLCPIDKVGRVIGESEGIVELLQNE 376
P+ + F G D + P D +G +IG + ++
Sbjct: 236 KLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQM 295
Query: 377 IGVDLKVADPVDGSDEQIITIS 398
G +K+A+ +GS E+ +TI+
Sbjct: 296 SGAQIKIANATEGSAERQVTIT 317
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S ++ K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSSVTSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 137/356 (38%), Gaps = 68/356 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA I + E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + + +I+ LE D V
Sbjct: 64 ------PTNAIFKAFAMIIYK--LEEDINSSMTKSTAAS----------------RLVTL 99
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 100 RLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 154
Query: 255 KNAVAIISSRLRES-QHRDRSHFHGRLHSP-------------DRFFPDDDYVPHMNNTA 300
V I + E+ H + L+ P DR Y PH +
Sbjct: 155 TKCVKQICLVMLETLSHSPQGKVKTILYQPMPSRSPVTCAGGQDRCSDAAGY-PHATHDL 213
Query: 301 RRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFYGE- 346
P +D G + S N + S +++ AG S V+ ++
Sbjct: 214 EGPPLDAYSIQGQHTISPLNLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASL 273
Query: 347 ----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 274 DASTQITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTIT 329
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G +K+ + E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALLHIQTRIVDLGADKDN----IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A +++ ++ K ++T RL+VP+++ G L G+ G + E+R+STGA
Sbjct: 69 FKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGA 128
Query: 463 NIQI 466
+Q+
Sbjct: 129 QVQV 132
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 178/444 (40%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEA 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSMLPPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 131/330 (39%), Gaps = 54/330 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ S + +I LE D V
Sbjct: 64 -------PTTSIFKAFSMIIEK--LEEDISTSMTNSTATSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R Q+++ LP +E + + G +
Sbjct: 100 IRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNS---TERAITIAGTPQS 154
Query: 254 VKNAVAIISSRLRESQHRD-----RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGA 308
+ V I + ES + R G SP F Y + +P +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSG---SPVIFAGGQAYAVQGQHAIPQPDL--- 208
Query: 309 RFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
+ + + P P +S + A M S Q E + P D +G +IG
Sbjct: 209 --TKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHE-----LTIPNDLIGCIIGRQGA 261
Query: 369 IVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS ++ +TI+
Sbjct: 262 KINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTTSI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I T + + A +T RL+VP+S+ G L G+ G + E+R S G
Sbjct: 69 FKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q +++E ++ + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGTPQ----SIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 522 GPTGSALV 529
P+GS ++
Sbjct: 181 KPSGSPVI 188
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ GA +
Sbjct: 79 LEEDISTSMTNSTATSKPP-------VTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDT 131
V +++P ER I I+ T
Sbjct: 132 QVAGDMLPNSTERAITIAGT 151
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 145/367 (39%), Gaps = 81/367 (22%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 214
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRP---------------------SGYSIEAGAAPM 336
+ P ++G + P+P +G+S G
Sbjct: 215 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS---GIESS 271
Query: 337 SDSVQPFYGEDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
S V+ ++G D + + P D +G +IG + ++ G +K+A+PV+GS
Sbjct: 272 SPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 331
Query: 392 EQIITIS 398
++ +TI+
Sbjct: 332 DRQVTIT 338
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|224153471|ref|XP_002337357.1| predicted protein [Populus trichocarpa]
gi|222838904|gb|EEE77255.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 432 ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ TRLLVPSS++GC+ G+ ++EMRR A I + + E P C S +ELVQI G
Sbjct: 1 MITRLLVPSSKVGCILGQGSQDINEMRR-LQAEICVYPKNEKPKCASEDEELVQISGNYG 59
Query: 491 AARDALVEVTT 501
A+D LV++ +
Sbjct: 60 VAKDVLVDIAS 70
Score = 49.7 bits (117), Expect = 0.006, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
TR++V VGC+LG+G + I +MR + +I + P++ P+C S EE+VQ+ G+
Sbjct: 3 TRLLVPSSKVGCILGQGSQDINEMR-RLQAEICVYPKNEK-PKCASEDEELVQISGNYGV 60
Query: 254 VKNAVAIISS 263
K+ + I+S
Sbjct: 61 AKDVLVDIAS 70
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 135/353 (38%), Gaps = 100/353 (28%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRS--NNYG-PRPSGYSIEAGAA------PMSDSVQPFYGEDL-- 348
A P + F+G + Y P P + A P+ + F G D
Sbjct: 183 ASTPVI----FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGLDASP 238
Query: 349 ---VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 239 PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 291
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 55/365 (15%)
Query: 336 MSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
M + +P +D L R++ +VG +IG+ IV+ + E G + ++D
Sbjct: 4 MDGNNKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCP 61
Query: 392 EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI----------------ITTR 435
E+I+T++ GP + +F +A I + + + +I IT R
Sbjct: 62 ERIVTVT---GPTNSIF---KAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLR 115
Query: 436 LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSR-----EEVPACVSGTDE-LVQIVGE 488
L+VP+S+ G L G+ GS + E+R TGA+IQ+ S E +SGT E + Q +
Sbjct: 116 LIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYH 175
Query: 489 IQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAR-EVQTV 547
I ++E + + YR Q P G G A ++ + PA ++ +
Sbjct: 176 ICC---VMLESPPKGATIPYRPKPQVGGPVILAG--GQAFTIQGNYAV---PAHSDMGKL 227
Query: 548 TDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLE 607
P A ++ + + P+ + + S+ R + NR P T E
Sbjct: 228 GSSPLAGLAALGLGGLAAPANTGGLNPAALAALAGSQLRTN---NANRQ-QPAANNQTHE 283
Query: 608 VVLPDYAVPKLITKSKTLLTRFSEMSGASVSLV-----EGQPEGTQKIIQISGTPEQVER 662
+ +P+ + +I K T + ++SGA + + EG P T + I I+G P+ V
Sbjct: 284 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGP--TDRTITITGNPDSVAL 341
Query: 663 AQSVL 667
AQ ++
Sbjct: 342 AQYLI 346
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 15 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT 68
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEV 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 249
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 250 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
G I I S +++ + + + + G ++A +A VE+ +LR D
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML 354
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F S+ + G S ++ A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 55/235 (23%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDTRR---------------RDPEGRM------PSFSPA---- 146
V +++P ER I I+ + P+G PS SP
Sbjct: 132 QVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG 191
Query: 147 -------------QEALFLIHDRILE------SDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
Q L +H ++ S G GF G E G G
Sbjct: 192 GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKG--YWAGLDA 249
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLPRCVSMS 241
+ + + +GC++G+ G I ++R + QI+I P + S R V+++
Sbjct: 250 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 195 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 248
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 249 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 281
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA
Sbjct: 282 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEI 337
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 338 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 387
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 388 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 432
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 433 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 488
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 489 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 547
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 548 TPD--ENEEVIVRIIGHFFASQTA 569
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 139/382 (36%), Gaps = 118/382 (30%)
Query: 69 NPKDPS-----LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
NPKD L VT T R+L H + G +IGK G +K +R+ +GA IN+ E E
Sbjct: 2 NPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPE 59
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGV 180
RI+ I+ +A+F I E D
Sbjct: 60 RIVTITG---------------PTDAIFKAFSMIALKFEEDINASMTNSTVTSK------ 98
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPR 236
V R+VV G L+GKGG I+++R T Q+++ LP +S R
Sbjct: 99 ---------PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 147
Query: 237 CVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV 293
V++S + I+Q V I V L SP P +
Sbjct: 148 AVTISGTPDAIIQCVKQICVV------------------------MLESP----PKGATI 179
Query: 294 PHMNNTARRPSMDGARFSGSNYRSNNY-----------GPRPS-GYSIEAGAA------- 334
P+ A P + F+G R++ P+P+ ++I+ A
Sbjct: 180 PYRPKPASAPII----FAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLT 235
Query: 335 -------------PMSDSVQPFYGEDLV-----FRMLCPIDKVGRVIGESEGIVELLQNE 376
P+ + F G D + P D +G +IG + ++
Sbjct: 236 KLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQM 295
Query: 377 IGVDLKVADPVDGSDEQIITIS 398
G +K+A+ +GS E+ +TI+
Sbjct: 296 SGAQIKIANATEGSAERQVTIT 317
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSTVTSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 151 TPDAIIQCVKQICVV 165
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 143/358 (39%), Gaps = 69/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPH------MNN 298
V I V ++ ++ R F G DR+ PH +N+
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSSGSASYPHTAPSMCLNS 214
Query: 299 TARRPSMDGARFSGSN-------------YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG 345
P + G ++ P G + +G S V+ ++G
Sbjct: 215 DLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWG 274
Query: 346 EDLVFR-----MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
D + + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 332
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 140/352 (39%), Gaps = 63/352 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 214
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGE 346
+ P ++G + P+P +++ PM+ F +
Sbjct: 215 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQ 274
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 TTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 326
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 276
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 277 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 308
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 309 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 353
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 354 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 410 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 465
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 347 DLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITI-SSEE 401
D R+L P VG +IG+ + I + Q+ + + K G+ E+ +TI ++ E
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS---GAAEKPVTIHATPE 186
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
G + A +L I + D + I ++L + +G L G++G +L ++ T
Sbjct: 187 GTSE----ACRMILEIMQKEADETKLAEEI-PLKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
G I I S +++ + + + + G ++A A +E+ +LR D
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML 291
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 151 TPDAIIQCVKQICVV 165
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + ++R TG V +++PG +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S +A L+ +LE G VG GG R+++S
Sbjct: 97 --ALSGISKAYHLVAKGLLE----------------GAPSVGMGGVINTSGTHPVRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV++ G ++ A
Sbjct: 139 HNQMGTIIGRAGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEIQGTPEGIEKATW 193
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R + L++P P N G R N+
Sbjct: 194 EIGKCLIDDHERG---YGTVLYNPAVRVQAGTTGPVTNG------FTGNRSYNRTGHGND 244
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQN 375
+ P+ YS +G+ S P ED + P D VG +IG + ++
Sbjct: 245 FSDSPT-YSRRSGSDAASRPPMPTTTEDGEEIQTQNISIPSDMVGCIIGRGGSKISEIRK 303
Query: 376 EIGVDLKVAD-PVDGSDEQIITI 397
G + +A P D + E++ TI
Sbjct: 304 SSGARISIAKAPHDETGERMFTI 326
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 142/359 (39%), Gaps = 73/359 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 170 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLT---- 222
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F +A +I D+ LE D V
Sbjct: 223 -GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 259
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 260 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLP---NSTERAITIAGVPQS 314
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMN 297
V V I + E+ + GR+ + P + P V PH
Sbjct: 315 VTECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT 371
Query: 298 NTARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYG 345
+ P +D G + S N + S +++ G + DS P Y
Sbjct: 372 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 431
Query: 346 EDL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 432 ASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 490
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 228
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 229 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 288
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 289 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 332
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 333 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 391
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 392 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 451
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 452 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 503
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 56 NTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH 115
N+S+ NS A S P T R++ + G +IGK G IK IR+ TGA + V
Sbjct: 244 NSSMTNST--AASRPP-------VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA 294
Query: 116 -ELIPGDEERIIEIS 129
+++P ER I I+
Sbjct: 295 GDMLPNSTERAITIA 309
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 142/397 (35%), Gaps = 145/397 (36%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMI--------AYKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNT 299
+ I+Q V I V L SP P +P+
Sbjct: 151 TPDAIIQCVKQICVV------------------------MLESP----PKGATIPYRPKP 182
Query: 300 ARRPSMDGARFSGSNYRSN-------------NYGPRPSGYSIEAGAA------------ 334
A P + F+G R++ + P P+ Y+I+ A
Sbjct: 183 ASTPVI----FAGGQVRADPLAASTANLSLLLQHQPLPA-YTIQGQYAIPHPDLTKLHQL 237
Query: 335 --------PMSDSVQPFYGEDLVFR-------------------------MLCPIDKVGR 361
P+ + F GE L + P D +G
Sbjct: 238 AMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGC 297
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 298 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 334
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
F A + D+G I RL+VP+S+ G L G+ GS + E+R++TG +IQ+
Sbjct: 79 FSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 467 LS 468
S
Sbjct: 139 AS 140
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + EE
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKKF--------------EE 91
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G VG ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 92 FNDVGKVGK-------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 144
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 145 --NSTERAVTLSGSAEQITQCIYQI 167
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 151 TPDAIIQCVKQICVV 165
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|428173185|gb|EKX42089.1| hypothetical protein GUITHDRAFT_74219, partial [Guillardia theta
CCMP2712]
Length = 268
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 30/189 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEG 138
+ L + AG +IG+ G+ I S++Q TGA I V +E PG + RI+ ++ G
Sbjct: 1 QFLASNKDAGTLIGRGGNTISSLQQRTGARIRVSNGNEYYPGTQNRIVLLT--------G 52
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
++ + A E G E ++ G G N + + V
Sbjct: 53 QLSNIMGALE----------------GSLREIYGDFSGHSAPSPPGDDRDSNGIMLTLAV 96
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
+ G L+G+GG+ I M E+ +I++ +DH +P ++E +V VVG I+ V AV
Sbjct: 97 PEISCGLLIGRGGENIRVMVEESGCKIQLTNKDHLVP---GITERLVLVVGQIDRVLKAV 153
Query: 259 AIISSRLRE 267
+I ++ E
Sbjct: 154 ELILYKMWE 162
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
N ++N + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E E
Sbjct: 2 NINDANAPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPE 59
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGV 180
RI+ I+ +A+F I E D
Sbjct: 60 RIVTITG---------------PTDAIFKAFSMIALKFEEDINASMTNSTVTSK------ 98
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPR 236
V R+VV G L+GKGG I+++R T Q+++ LP +S R
Sbjct: 99 ---------PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 147
Query: 237 CVSMS---EEIVQVVGDI 251
V++S + I+Q V I
Sbjct: 148 AVTISGTPDAIIQCVKQI 165
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSTVTSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 143/360 (39%), Gaps = 75/360 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E+ + + G +
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV--AGDMLPNS---TEQAITIAGMPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRL----------HSP-------DRFFPDDDYVPHM 296
V V I + E+ + GR+ SP DR+ Y PH
Sbjct: 155 VTECVKQICLVMLETISQSP---QGRVMTIPYQPMPASSPVICAGGQDRYSNTAGY-PHA 210
Query: 297 NNTARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPF 343
+ P +D G + S N + S +++ AG S V+ +
Sbjct: 211 THDLEGPPLDAYSIQGQHTISPLHLANLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGY 270
Query: 344 YGE-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 271 WASLDASTQTTHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R+STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
A +Q+ + + +P + T++ + I G Q+ + + ++
Sbjct: 129 AQVQV-AGDMLP---NSTEQAITIAGMPQSVTECVKQI 162
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRRRDPEG 138
T + + + + G VIG+ GS IK I+ +GA +N E ++PG ERI+ +S
Sbjct: 172 TIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVA------ 225
Query: 139 RMPSFSPAQEALFLIHDRILESD-------GGGGFYGEEEEEYGG------GGGVGGGGF 185
A++ I +LE G G Y ++ + G G GG
Sbjct: 226 -----DAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGA 280
Query: 186 RGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLP-RCVSMSEE 243
G++ ++ + VG ++GK G I ++R +++ QIR+ P P + V+ E
Sbjct: 281 SAPGSQT-QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDER 339
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHR 271
+V + G N+ AV ++ RL + +
Sbjct: 340 LVTITGQPVNINIAVQMLYHRLEAEKAK 367
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+ R L A +IG++G+ + IR+ +GA + + E IPG+ ERI+ +
Sbjct: 89 SMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNV----------- 137
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ +A LI RI +E + G V + ++
Sbjct: 138 FGALDAVSKAFGLIVRRI------------NDEPFDVAS-------VPGSRAVTIKFIIP 178
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+GG I++ ++ + R+ + LP +E I+ V G + + AV
Sbjct: 179 NSRMGSVIGRGGSKIKE--IQDASGARLNASEVMLP---GSTERILSVSGVADAIHIAVY 233
Query: 260 IISSRLRESQHRD 272
I + L E Q R+
Sbjct: 234 YIGTILLEYQERN 246
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 139/348 (39%), Gaps = 59/348 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVF 350
P ++G + P+P +++ PM+ F +
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 274
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K A+PV+GS ++ +TI+
Sbjct: 275 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL++P+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 136/367 (37%), Gaps = 89/367 (24%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERI+ I+
Sbjct: 13 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTITG---- 66
Query: 135 DPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+A+F I E D
Sbjct: 67 -----------PTDAIFKAFSMIALKFEEDINASMTNSTVTSK---------------PP 100
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEI 244
V R+V+ G L+GKGG I+++R T Q+++ LP +S R V++S + I
Sbjct: 101 VTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAI 158
Query: 245 VQVVGDINNV---------------KNAVAII---SSRLRESQHRDRSHFHGRLHSPDR- 285
+Q V I V K A A I ++R + H L P
Sbjct: 159 IQCVKQICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTLLASAGNHAVLAQPQTA 218
Query: 286 --FFPDDDY-VPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGA------APM 336
F Y +PH + + SM F Y PS + A P+
Sbjct: 219 PAFTIQGQYAIPHPDVS----SMHVLYFL--------YSLLPSLTKLHQLAMQHPPFTPL 266
Query: 337 SDSVQPFYGEDL-----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
+ F G D + P D +G +IG + ++ G +K+A+ +GS
Sbjct: 267 GQTTPGFPGLDASTPASSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSA 326
Query: 392 EQIITIS 398
E+ +TI+
Sbjct: 327 ERQVTIT 333
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSTVTSKPP-----VTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 132/363 (36%), Gaps = 106/363 (29%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV------KNAVAIISSRLRES------------------QHRDRSH 275
+ I+Q V I V K +++ + + H D +
Sbjct: 151 TPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTK 210
Query: 276 FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP 335
H F P P T R F S + + P S +
Sbjct: 211 LHQLAMQQTPFPPLGQTNPAFPGTDR-----AVPFVRSPWACLDASPPASTH-------- 257
Query: 336 MSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQII 395
+ P D +G +IG + ++ G +K+A+ +GS E+ I
Sbjct: 258 ---------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 302
Query: 396 TIS 398
TI+
Sbjct: 303 TIT 305
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ V
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDIINSMSNSPA----TSKPPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R V++S + I+Q
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDAIIQ 157
Query: 247 VVGDINNV 254
V I V
Sbjct: 158 CVKQICVV 165
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 174/420 (41%), Gaps = 71/420 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I++H + G E+ I I + PEG
Sbjct: 201 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHAS----PEG-- 254
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + + +E + +++
Sbjct: 255 -----CSTACKIIME-IMQKEAQDTKFTDE---------------------IPLKILAHN 287
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G I A
Sbjct: 288 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQE---LTLYNPERTITVKGSIETCGKAEEE 344
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
I ++RES D S + + H +P +N A + A SG
Sbjct: 345 IMKKIRESYESDLSAMNLQAH----------LLPGLNLNAL--GLFPASTSGI------- 385
Query: 321 GPRPSGYSIEAGAAPMSDSVQPF--YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
P PS + + AA + + P+ E + P VG +IG+ ++ L G
Sbjct: 386 -PSPSTLGVPSAAA--ATNYLPYGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAG 442
Query: 379 VDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P + E+++ I+ GP + F AQ + G ++ + +
Sbjct: 443 ASIKIAPPETPDAKERMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 499
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDA 495
VPS G + G+ G +++E++ T A + ++ R+++P DE +V+I G A + A
Sbjct: 500 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVIVKITGHFYACQLA 555
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 137/328 (41%), Gaps = 51/328 (15%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D+ RML P VG +IG+ + + Q + +D+ + S++ I +S EG
Sbjct: 197 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCS 256
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
A + ++ I + D I ++L ++ +G L G++G +L ++ + T
Sbjct: 257 T----ACKIIMEIMQKEAQDTKFTDE-IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTK 311
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
I I +E+ + + + + G I+ A E+ ++R D
Sbjct: 312 ITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDL------------ 357
Query: 524 TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPAT-SQPSKEAAGSVSETVKQNE 582
SA+ ++A + P + + PA+T + P+T PS AA + +Q E
Sbjct: 358 --SAMNLQA----HLLPGLNLNALGLFPAST-SGIPSPSTLGVPSAAAATNYLPYGQQAE 410
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
+E T+ + +P AV +I K + + S +GAS+ +
Sbjct: 411 TE--------------------TVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPP 450
Query: 643 Q-PEGTQKIIQISGTPEQVERAQSVLQG 669
+ P+ ++++ I+G PE +AQ + G
Sbjct: 451 ETPDAKERMVIITGPPEAQFKAQGRIYG 478
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 32/155 (20%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T + M G +IGK G IK + + GA I +I+ D +
Sbjct: 411 TETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASI--------------KIAPPETPDAK 456
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
RM + EA F RI F+G +EE ++ +
Sbjct: 457 ERMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEV-----------------KLEAHIK 499
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
V G ++GKGGK + +++ T ++ ++PRD
Sbjct: 500 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ 533
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 16/144 (11%)
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHI 417
+VG +IG+ ++L++++ G + ++D E+I+TI+ G ++ F A L
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISD--GSCPERIVTITGSIGTINKAFGMICAKLQ- 57
Query: 418 QTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEV 472
DL A ++I IT RL+VP+++ GC+ G+ G+ + E+R +TGA+IQ+ S E +
Sbjct: 58 ----QDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVAS-EML 112
Query: 473 PACVSGTDELVQIVGEIQAARDAL 496
P S T+ V I G + D +
Sbjct: 113 P---SSTERAVTISGSADSIVDCM 133
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK G+ IK IR+ TGA I V E++P ER
Sbjct: 65 NSIPKPP-----ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERA 119
Query: 126 IEIS 129
+ IS
Sbjct: 120 VTIS 123
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F ++ + G S ++ A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ G + +
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GSTNAI 71
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + D+ + + IT RL+VP+S+ G L G+ GS + E+R TGA
Sbjct: 72 FKAFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 131
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+IQ+ S E +P + T+ V I G +A + + T +
Sbjct: 132 SIQVAS-EMLP---NSTERAVTISGTGEAITQCIYHICTVM 168
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 51/209 (24%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
M+N IN+ +N VT T R++ + G +IGK G I+K R+ +GA I
Sbjct: 3 MDNKNMINDDSN------------VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKI 50
Query: 113 NVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
N+ + ERI+ ++ + A+F I + + E ++
Sbjct: 51 NISD--GSCPERIVTVTGS---------------TNAIFKAFTLICKK------FEEFQD 87
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----L 228
GG GV + R++V G L+GKGG I+++R T I++ L
Sbjct: 88 INSGGSGV-------PRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEML 140
Query: 229 PRDHSLPRCVSMS---EEIVQVVGDINNV 254
P +S R V++S E I Q + I V
Sbjct: 141 P--NSTERAVTISGTGEAITQCIYHICTV 167
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 23/163 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
R TGA+IQ+ S E +P + T+ V I G +A + +
Sbjct: 130 REVTGASIQVAS-EMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + GGGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQSGGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 51/328 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR---PSMDGARF 310
+ V I + ES + + P R P V + +M + F
Sbjct: 155 IIECVKQICVVMLESPPKG-------VTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHF 207
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
++ + G S ++ A + S Q E + P D +G +IG +
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCIIGRQGAKI 262
Query: 371 ELLQNEIGVDLKVADPVDGSDEQIITIS 398
++ G +K+A+PV+GS ++ +TI+
Sbjct: 263 NEIRQMSGAQIKIANPVEGSTDRQVTIT 290
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 45/223 (20%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDTRR---------------RDPEGRM------PSFSP---AQ 147
V +++P ER I I+ + P+G PS SP A
Sbjct: 132 QVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG 191
Query: 148 EALFLIHDRILE------SDGGGGFYGEEEE--EYGGGGGVGGGGFRGGGNRVATRMVVS 199
L +H ++ + G GF G E E G G + + +
Sbjct: 192 GQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG----YWAGLDASAQTTSHELTIP 247
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLPRCVSMS 241
+GC++G+ G I ++R + QI+I P + S R V+++
Sbjct: 248 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 290
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 650 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 703
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 704 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 736
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + A
Sbjct: 737 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACACAEI 792
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 793 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 842
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 843 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 887
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 888 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 943
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 944 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 1002
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 1003 TPD--ENEEVIVRIIGHFFASQTA 1024
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E V + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F ++ + G S ++ A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 175/420 (41%), Gaps = 71/420 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I++H + G E+ I I + PEG
Sbjct: 201 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHAS----PEG-- 254
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + + +E + +++
Sbjct: 255 -----CSTACKIIME-IMQKEAQDTKFTDE---------------------IPLKILAHN 287
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G I A
Sbjct: 288 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQE---LTLYNPERTITVKGSIETCGKAEEE 344
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
I ++RES D S + + H +P +N A + A SG
Sbjct: 345 IMKKIRESYESDLSAMNLQAH----------LLPGLNLNAL--GLFPASTSGI------- 385
Query: 321 GPRPSGYSIEAGAAPMSDSVQPF--YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
P PS + + AA + + P+ E + P VG +IG+ ++ L G
Sbjct: 386 -PSPSTLGVPSAAA--ATNYLPYGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAG 442
Query: 379 VDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P + E+++ I+ GP + F AQ + G ++ + ++
Sbjct: 443 ASIKIAPPETPDAKERMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAQIK 499
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDA 495
VPS G + G+ G +++E++ T A + ++ R+++P DE +V+I G A + A
Sbjct: 500 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVIVKITGHFYACQLA 555
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 137/328 (41%), Gaps = 51/328 (15%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D+ RML P VG +IG+ + + Q + +D+ + S++ I +S EG
Sbjct: 197 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCS 256
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
A + ++ I + D I ++L ++ +G L G++G +L ++ + T
Sbjct: 257 T----ACKIIMEIMQKEAQDTKFTDE-IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTK 311
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
I I +E+ + + + + G I+ A E+ ++R D
Sbjct: 312 ITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDL------------ 357
Query: 524 TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPAT-SQPSKEAAGSVSETVKQNE 582
SA+ ++A + P + + PA+T + P+T PS AA + +Q E
Sbjct: 358 --SAMNLQA----HLLPGLNLNALGLFPAST-SGIPSPSTLGVPSAAAATNYLPYGQQAE 410
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
+E T+ + +P AV +I K + + S +GAS+ +
Sbjct: 411 TE--------------------TVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPP 450
Query: 643 Q-PEGTQKIIQISGTPEQVERAQSVLQG 669
+ P+ ++++ I+G PE +AQ + G
Sbjct: 451 ETPDAKERMVIITGPPEAQFKAQGRIYG 478
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 32/155 (20%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T + M G +IGK G IK + + GA I +I+ D +
Sbjct: 411 TETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASI--------------KIAPPETPDAK 456
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
RM + EA F RI F+G +EE ++ ++
Sbjct: 457 ERMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEV-----------------KLEAQIK 499
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDH 232
V G ++GKGGK + +++ T ++ ++PRD
Sbjct: 500 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ 533
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 193
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 194 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 227 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 282
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 283 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 332
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E V +
Sbjct: 333 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEVVNLFI 377
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 378 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 433
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 434 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 492
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 493 TPD--ENEEVIVRIIGHFFASQTA 514
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 276
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 277 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 326
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E V +
Sbjct: 327 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEVVNLFI 371
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 372 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 427
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 428 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 486
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 487 TPD--ENEEVIVRIIGHFFASQTA 508
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 141/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP-----FY 344
P +D G + S N + S +++ G + DS P +
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 345 GEDL----VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G D + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 GLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 147/377 (38%), Gaps = 80/377 (21%)
Query: 64 NRANSNPKDP-------SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
N A +P P L VT T R+L H + G +IGK G +K IR+ +GA IN+ E
Sbjct: 1 NAARRSPWTPVNRVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE 60
Query: 117 LIPGD-EERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYG 175
G+ ERII ++ P + F +A +I D+ LE D
Sbjct: 61 ---GNCPERIITLT-----GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR- 104
Query: 176 GGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP 235
V R+VV G L+GKGG I+++R T Q+++ LP
Sbjct: 105 --------------PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 148
Query: 236 RCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV- 293
+ +E + + G +V V I + E+ + GR+ + P + P V
Sbjct: 149 ---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVI 202
Query: 294 --------------PHMNNTARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE-- 330
PH + P +D G + S N + S +++
Sbjct: 203 CAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHG 262
Query: 331 ----AGAAPMSDSVQPFYGE-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDL 381
AG S V+ ++ + P + +G +IG + ++ G +
Sbjct: 263 GTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQI 322
Query: 382 KVADPVDGSDEQIITIS 398
K+A+PV+GS + +TI+
Sbjct: 323 KIANPVEGSSGRQVTIT 339
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 77
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 78 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 137
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 138 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 181
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 240
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 241 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 300
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 301 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 352
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 92 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 146
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 147 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 200
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 129 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 132/342 (38%), Gaps = 77/342 (22%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
T R+VV G L+GKGG I+++R T Q+++ LP +E V
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS---TERAVT 147
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHFHG--RLHSPDRFFPDDDY-------VPHMN 297
+ G + + V I + ES + + +P F Y +PH +
Sbjct: 148 ISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPD 207
Query: 298 NTA-RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPI 356
T + +M F + + P+G D+ P +L P
Sbjct: 208 LTKLHQLAMQQTPFPPLGQTNPAF---PAGL----------DASPPASTHELTI----PN 250
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
D +G +IG + ++ G +K+A+ +GS E+ ITI+
Sbjct: 251 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 292
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILSR-----EEVPACVSGTDELV 483
R TGA+IQ+ S E +SGT E +
Sbjct: 130 REVTGASIQVASEMLPNSTERAVTISGTSEAI 161
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + GGGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQSGGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 151/358 (42%), Gaps = 61/358 (17%)
Query: 337 SDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
S S P ED L R++ +VG +IG+ IV + E G + ++D E
Sbjct: 9 SASGAPIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPE 66
Query: 393 QIITISSEEGPDDELFPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
+I+T+S G + +F A + ++ D+G I RL+VP+S+ G L G
Sbjct: 67 RIVTVS---GTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIG 123
Query: 449 RDGS-LSEMRRSTGANIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
+ GS + E+R++TG +IQ+ S E +SG+ E QI I ++E R
Sbjct: 124 KSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPR 181
Query: 503 LRSYLYRDFFQKETPPSSTGPT----GSALVVEAASPIDITPAREV-QTVTDPPAATHQS 557
+ YR P TGP G A ++ + P +EV + AA +
Sbjct: 182 GATIPYRP------KPQVTGPVILANGQAFTIQGNYAV---PTQEVAKNPLASLAALGLA 232
Query: 558 VQIPATS-----QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPD 612
PA++ AGS T N +++++ TV N +
Sbjct: 233 GMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDL---------------- 276
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQP-EG--TQKIIQISGTPEQVERAQSVL 667
+ +I K T + ++SGA + + + EG T + I ISG P+ V AQ ++
Sbjct: 277 --IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 332
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 44/202 (21%)
Query: 60 NNSNNRANSNP---KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NN+++ A+ P +DPS VT T R++ + G +IGK G I+ R+ +GA IN+ +
Sbjct: 4 NNTSSSASGAPIKLEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
ERI+ +S T FS A LI + + E ++
Sbjct: 62 --GSCPERIVTVSGTTNAI-------FS----AFTLITKK----------FEEWCSQFND 98
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
G V G ++ R++V G L+GK G I+++R T I++ LP +
Sbjct: 99 VGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP--N 149
Query: 233 SLPRCVSMS---EEIVQVVGDI 251
S R V++S E+I Q + I
Sbjct: 150 STERAVTLSGSAEQITQCIYQI 171
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 142/359 (39%), Gaps = 73/359 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 19 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLT---- 71
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + F +A +I D+ LE D V
Sbjct: 72 -GPTNAI--F----KAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 108
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 109 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQS 163
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMN 297
V V I + E+ + GR+ + P + P V PH
Sbjct: 164 VTECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT 220
Query: 298 NTARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIE------AGAAPMSDSVQPFY 344
+ P +D G + S N + S +++ AG S V+ ++
Sbjct: 221 HDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYW 280
Query: 345 GE-----DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 281 ASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 339
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 77
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 78 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 137
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 138 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 181
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 240
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 241 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 300
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 301 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 352
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 92 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 146
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 147 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 200
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 193
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 194 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 227 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 282
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 283 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 332
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E V +
Sbjct: 333 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEVVNLFI 377
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 378 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 433
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 434 RIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 492
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 493 TPD--ENEEVIVRIIGHFFASQTA 514
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 41/341 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILS-----REEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRSYLYRD 510
R TGA+IQ+ S E +SGT E + Q + I ++E + + YR
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAITQCIYHICC---VMLESPPKGATIPYRP 186
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAR-EVQTVTDPPAATHQSVQIPATSQPSKE 569
Q P G G A ++ + PA ++ + P A ++ + + P+
Sbjct: 187 KPQVGGPVILAG--GQAYTIQGNYAV---PAHSDMGKLGSNPLAGLAALGLGGLATPANT 241
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
+ + S+ R + NR P T E+ +P+ + +I K T +
Sbjct: 242 GGLNPAALAALAGSQLRT---SNTNRQ-QPAANNQTHEMTVPNELIGCIIGKGGTKIAEI 297
Query: 630 SEMSGASVSLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
++SGA + + E + T + I I+G P+ V AQ ++
Sbjct: 298 RQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLI 338
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + G GGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQGSGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 276
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 277 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 326
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 327 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 371
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 372 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 427
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 428 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 486
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 487 TPD--ENEEVIVRIIGHFFASQTA 508
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 134 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 187
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 188 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 220
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 221 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 276
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 277 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 326
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 327 APPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 371
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 372 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 427
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 428 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 486
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 487 TPD--ENEEVIVRIIGHFFASQTA 508
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 55/339 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP---- 303
I VK ++ L +S + + + SP F Y +P
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 214
Query: 304 ----SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
+M + F ++ + G S ++ A + S Q E + P D +
Sbjct: 215 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLI 269
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 308
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILS-----REEVPACVSGTDELV 483
R TGA+IQ+ S E +SGT E +
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAI 161
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + G GGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQGSGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACATAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 9 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 63 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 99
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 100 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 154
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 155 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + ITI+
Sbjct: 272 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITIT 329
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 67
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 68 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 127
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 128 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 171
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 230
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 231 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 290
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + I I+G+ + AQ ++
Sbjct: 291 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITITGSAASISLAQYLI 342
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 82 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 136
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 137 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 190
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GTCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 136/372 (36%), Gaps = 115/372 (30%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E P ERI+ I+
Sbjct: 13 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP---ERIVTITG--- 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+A+F I E D
Sbjct: 67 ------------PTDAIFKAFSMIALKFEEDINASMTNSSVTSK---------------P 99
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EE 243
V R+VV G L+GKGG I+++R T Q+++ LP +S R V++S +
Sbjct: 100 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISGTPDA 157
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
I+Q V I V L SP P +P+ A P
Sbjct: 158 IIQCVKQICVV------------------------MLESP----PKGATIPYRPKPASAP 189
Query: 304 SMDGARFSGSNYRSNNY-----------GPRPS-GYSIEAGAA----------------- 334
+ F+G R++ P+P+ ++I+ A
Sbjct: 190 II----FAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHP 245
Query: 335 ---PMSDSVQPFYGEDLV-----FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP 386
P+ + F G D + P D +G +IG + ++ G +K+A+
Sbjct: 246 PFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANA 305
Query: 387 VDGSDEQIITIS 398
+GS E+ +TI+
Sbjct: 306 TEGSAERQVTIT 317
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S ++ K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSSVTSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
F A + D+G I RL+VP+S+ G L G+ GS + E+R++TG +IQ+
Sbjct: 79 FSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 138
Query: 467 LS 468
S
Sbjct: 139 AS 140
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + EE
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKKF--------------EE 91
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G VG ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 92 FNDVGKVGK-------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 144
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 145 --NSTERAVTLSGSAEQITQCIYQI 167
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 41/341 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILS-----REEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRSYLYRD 510
R TGA+IQ+ S E +SGT E + Q + I ++E + + YR
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAITQCIYHICC---VMLESPPKGATIPYRP 186
Query: 511 FFQKETPPSSTGPTGSALVVEAASPIDITPAR-EVQTVTDPPAATHQSVQIPATSQPSKE 569
Q P G G A ++ + PA ++ + P A ++ + + P+
Sbjct: 187 KPQVGGPVILAG--GQAYTIQGNYAV---PAHSDMGKLGSNPLAGLAALGLGGLATPANT 241
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
+ + S+ R + NR P T E+ +P+ + +I K T +
Sbjct: 242 GGLNPAALAALAGSQLRT---SNTNRQ-QPAANNQTHEMTVPNELIGCIIGKGGTKIAEI 297
Query: 630 SEMSGASVSLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
++SGA + + E + T + I I+G P+ V AQ ++
Sbjct: 298 RQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLI 338
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + G GGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQGSGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 55/339 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D++ EE + R V
Sbjct: 64 -------PT-NAIFKAFAMIIDKL-------------EEVFSSSMTNSTAASR---PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP---- 303
I VK ++ L +S + + + SP F Y +P
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 214
Query: 304 ----SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
+M + F ++ + G S ++ A + S Q E + P D +
Sbjct: 215 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLI 269
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 308
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 179/434 (41%), Gaps = 79/434 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 128 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 181
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE V +++
Sbjct: 182 -----TSEACRMILE-IMQKEAEDTKLAEE---------------------VPLKILAHN 214
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G I+ NA
Sbjct: 215 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTIDACANAEM 270
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ D + + + +P +N +A G +G +
Sbjct: 271 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSAL-----GIFSTGLSVLPPP 315
Query: 320 YGPR---PS----GYSIEAGAAP--------MSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
GPR PS ++ +G P Y E + P VG +IG
Sbjct: 316 AGPRGVPPSVPYHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIG 375
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIV 422
+ ++ L G +K+A P +G D E+++ I+ GP + F AQ +
Sbjct: 376 KKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEEN 431
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE 481
++ + + VPSS G + G+ G +++E++ T A + I+ R++ P +
Sbjct: 432 FFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENAEV 488
Query: 482 LVQIVGEIQAARDA 495
+V+I+G A++ A
Sbjct: 489 IVRIIGHFFASQTA 502
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 193
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 194 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 227 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 282
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 283 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 332
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 333 APPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 377
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 378 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 433
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 434 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 492
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 493 TPD--ENEEVIVRIIGHFFASQTA 514
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 140 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 193
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 194 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 226
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 227 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 282
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 283 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 332
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 333 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 377
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 378 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 433
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 434 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 492
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 493 TPD--ENEEVIVRIIGHFFASQTA 514
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 139/359 (38%), Gaps = 83/359 (23%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTASSR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
V I V ++ ++ R F G DR+ PH PS
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSSGSASYPH-----TAPS 209
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAA-------------------PMSDSVQPF-- 343
M S+ GP Y+I+ A PMS F
Sbjct: 210 M--------CLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSA 261
Query: 344 ----YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 262 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 320
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A+S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTASSRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D + ++ + S Y +
Sbjct: 340 EIMKKLREA------------------FENDMLAVNTHSG----------YFSSLYPHHQ 371
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
+GP P +S Y E + + P VG +IG+ ++ L G
Sbjct: 372 FGPFPHHHS---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 416
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 417 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 528
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 39/190 (20%)
Query: 69 NPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI 128
+P++ L +T T R+L H + G +IGK G +K IR+ + A I + E
Sbjct: 13 SPEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISE------------ 60
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
PE R+ + + + +A+F I F EE+ G GG G G
Sbjct: 61 ----GSCPE-RITTITGSTDAVFRAVSMI-------AFKLEEDL------GAGGDGVSAG 102
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS--- 241
V R+V+ G L+GK G I ++R T Q+++ LP +S R V++S
Sbjct: 103 RAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLP--NSTERAVTVSGVP 160
Query: 242 EEIVQVVGDI 251
+ I+Q V I
Sbjct: 161 DTIIQCVRQI 170
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 326 GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA- 384
G + AG AP++ R++ P + G +IG++ + ++ G ++VA
Sbjct: 96 GDGVSAGRAPVT------------LRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAG 143
Query: 385 DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIG 444
D + S E+ +T+S PD + ++ L D + + LVP+ IG
Sbjct: 144 DLLPNSTERAVTVSGV--PDTIIQCVRQICL-------DPSSQSSS---QEFLVPNDLIG 191
Query: 445 CLEGRDGS-LSEMRRSTGANIQILSREE 471
C+ GR GS +SE+R+ +GA+I+I ++ E
Sbjct: 192 CIIGRHGSKISEIRQMSGAHIKIGNQTE 219
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E V +
Sbjct: 390 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEVVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----------ITTRLLVPSSEIGCLEGRDGS-LSEM 456
F +A I + + + +I IT RL+VP+S+ G L G+ GS + E+
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 457 RRSTGANIQILS-----REEVPACVSGTDELV 483
R TGA+IQ+ S E +SGT E +
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAI 161
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E + + + G GGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE-------WCSQFHDIQGSGGV-------PRPP 103
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLP--NSTERAVTISGTSEAI 161
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 162 TQCIYHICCV 171
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK+G I+ I+ +GA I V HE PG R +E+S +
Sbjct: 142 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSG----N 197
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT- 194
PE S A++ LI + I E+D G G V GG A
Sbjct: 198 PE----QISKAEQ---LIKEVIAEADAGSS------------GAVSGGRKYNAPQPGAET 238
Query: 195 -RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+M ++ VG ++GKGG+ I+ M+ ++ +I+++P LP + +E V + G
Sbjct: 239 FQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLH--LPAGDTSTERTVHIDGTQEQ 296
Query: 254 VKNAVAIISSRLRESQHRD 272
+++A +++ E++ R+
Sbjct: 297 IEHAKQLVAEVTSENRARN 315
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 9 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 62
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 63 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 99
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 100 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 154
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 155 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 272 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 329
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 67
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 68 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 127
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 128 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 171
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 230
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 231 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 290
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 291 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 342
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 82 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 136
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 137 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 190
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 601 VTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV 660
V+ +T+EV +P AV ++ K + + E+SGA V L + + + ++I+ISGTPEQ
Sbjct: 113 VSTTTVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVKLHDSESGASDRVIEISGTPEQT 172
Query: 661 ERAQSVLQGFI 671
A+S+LQ FI
Sbjct: 173 HAAKSLLQAFI 183
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
P + TTT + G V+GK GS I+ IR+ +GA + +H+ G +R+IEIS T
Sbjct: 110 PKNVSTTTVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVKLHDSESGASDRVIEISGT 168
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPERIVTIT---GPTDAI 71
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
A +Q+ + E +SGT D ++Q V +I
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 165
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 137/365 (37%), Gaps = 69/365 (18%)
Query: 64 NRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE 123
N ++ + L VT T R+L H + G +IGK G +K +R+ +GA IN+ E E
Sbjct: 2 NTKDTKATEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSCPE 59
Query: 124 RIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI---LESDGGGGFYGEEEEEYGGGGGV 180
RI+ I+ +A+F I E D
Sbjct: 60 RIVTITG---------------PTDAIFKAFSMIALKFEEDINASMTNSTVTSK------ 98
Query: 181 GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPR 236
V R+VV G L+GKGG I+++R T Q+++ LP +S R
Sbjct: 99 ---------PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTER 147
Query: 237 CVSMS---EEIVQVVGDINNVKNAVAIISSRLRESQ--HRDRSHFHGRLHSPDRFFPDDD 291
V++S + I+Q V I V ++ S + + +R + + + + D
Sbjct: 148 AVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTI 202
Query: 292 YVPHMNNTARRPSM-------DGARFSGSNYRSNNYGPRPSGYSIEAGA------APMSD 338
N+T R S F + P P + A P+
Sbjct: 203 LASAGNHTELRLSYLTDLCLNCACCFQAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQ 262
Query: 339 SVQPFYGEDLV-----FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
+ F G D + P D +G +IG + ++ G +K+A+ +GS E+
Sbjct: 263 TTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAER 322
Query: 394 IITIS 398
+TI+
Sbjct: 323 QVTIT 327
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN S + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 86 INASMTNSTVTSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 140
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 141 LPNSTERAVTISGT 154
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 196 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 249
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 250 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 282
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 283 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 338
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 339 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 388
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 389 APPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 433
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 434 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 489
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 490 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 548
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 549 TPD--ENEEVIVRIIGHFFASQTA 570
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAVGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAVGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 151/358 (42%), Gaps = 61/358 (17%)
Query: 337 SDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
S S P ED L R++ +VG +IG+ IV + E G + ++D E
Sbjct: 9 SASGAPIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPE 66
Query: 393 QIITISSEEGPDDELFPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
+I+T+S G + +F A + ++ D+G I RL+VP+S+ G L G
Sbjct: 67 RIVTVS---GTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIG 123
Query: 449 RDGS-LSEMRRSTGANIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
+ GS + E+R++TG +IQ+ S E +SG+ E QI I ++E R
Sbjct: 124 KSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPR 181
Query: 503 LRSYLYRDFFQKETPPSSTGPT----GSALVVEAASPIDITPAREV-QTVTDPPAATHQS 557
+ YR P TGP G A ++ + P +EV + AA +
Sbjct: 182 GATIPYRP------KPQVTGPVILANGQAFTIQGNYAV---PTQEVAKNPLASLAALGLA 232
Query: 558 VQIPATS-----QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPD 612
PA++ AGS T N +++++ TV N +
Sbjct: 233 GMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDL---------------- 276
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQP-EG--TQKIIQISGTPEQVERAQSVL 667
+ +I K T + ++SGA + + + EG T + I ISG P+ V AQ ++
Sbjct: 277 --IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 332
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 44/202 (21%)
Query: 60 NNSNNRANSNP---KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NN+++ A+ P +DPS VT T R++ + G +IGK G I+ R+ +GA IN+ +
Sbjct: 4 NNTSSSASGAPIKLEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
ERI+ +S T FS A LI + + E ++
Sbjct: 62 --GSCPERIVTVSGTTNAI-------FS----AFTLITKK----------FEEWCSQFND 98
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
G V G ++ R++V G L+GK G I+++R T I++ LP +
Sbjct: 99 VGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP--N 149
Query: 233 SLPRCVSMS---EEIVQVVGDI 251
S R V++S E+I Q + I
Sbjct: 150 STERAVTLSGSAEQITQCIYQI 171
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 47/327 (14%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFSMIIDK-LEEDISSSMTNSTASSK---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+ V I + ES + + + SP F Y + P D +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYT--IQGQYAIPQPDLTKLH 212
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+ +++ P +S G + D+ +L P D +G +IG +
Sbjct: 213 QLAMQQSHF---PMSHSGNTGFSGGIDASAQATSHELTI----PNDLIGCIIGRQGAKIN 265
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITIS 398
++ G +K+A+PV+GS+++ +TI+
Sbjct: 266 EIRQMSGAQIKIANPVEGSNDRQVTIT 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A+S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTASSKPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D SL VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERI+ I+
Sbjct: 10 DGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG- 66
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
A EA+F I + + E+ V
Sbjct: 67 --------------ATEAIFRAFAMIAQK------FEEDISAAMSNSSV------TSKPP 100
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEI 244
V R+V G L+GKGG I+++R T Q+++ LP S R V++S + I
Sbjct: 101 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLP--DSTERAVTISGTPQAI 158
Query: 245 VQVVGDINNV 254
Q V I +V
Sbjct: 159 TQCVRHICSV 168
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ S E+I+TI+ G + +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTIT---GATEAI 71
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I + + +T RL+ P S+ G L G+ GS + E+R +TG
Sbjct: 72 FRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 131
Query: 462 ANIQI 466
A +Q+
Sbjct: 132 AQVQV 136
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 91 SNSSVTSKPP-------VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPD 143
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 144 STERAVTISGT 154
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCGDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCGDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 109 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 162
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 163 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 199
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 200 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLP---NSTERAITIAGVPQSV 254
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 255 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 311
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 312 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 371
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 372 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 429
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 153/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 167
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 168 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 227
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 228 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 271
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 272 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 330
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 331 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 390
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 391 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 442
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 182 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 236
Query: 118 IPGDEERIIEIS 129
+P ER I I+
Sbjct: 237 LPNSTERAITIA 248
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 168/425 (39%), Gaps = 93/425 (21%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK G + +R TG V +++ G +R++ I+ G
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTIT--------GG 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S A ++ +LE G +G GG ++++S
Sbjct: 100 CEAIS---RAYAIVAQALLE----------------GAPSLGMGGVPQSNGTHPIKLLIS 140
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ + + + +R++ + LP+ +E IV+V G + ++ A+
Sbjct: 141 HNQMGTIIGRQGLKIKHI--QDVSGVRMVAQKEMLPQS---TERIVEVQGTPDGIRAAIW 195
Query: 260 IISSRLRESQHRDRSHFHGRLHSPD-RFFPDDDYVPHMNNTA-RRPSMDGARF------- 310
IS L + R L++P R P P + T+ PS G R
Sbjct: 196 EISKCLVDDWQRGTGTV---LYNPVVRTQPGS--TPAVGGTSPSYPSTGGGRSQEYSSPR 250
Query: 311 -----SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIG 364
+G+++ SN G RP ++ AA GE+L + + P D VG +IG
Sbjct: 251 VLRTGNGADFSSNGGGQRPYSRRSDSDAASRGPPTHDENGEELQTQNISIPADMVGCIIG 310
Query: 365 ESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD 423
+ + ++ G + +A P D + E++ TI
Sbjct: 311 RAGSKISEIRKTSGARISIAKAPHDETGERMFTI-------------------------- 344
Query: 424 LGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEV----PACVSGT 479
+G K N LL + E +MRRS + +SR ++ P C+ G+
Sbjct: 345 MGTSKANESALFLLYENLEA----------EKMRRSQAQTSEAISRSDLPRGCPICLIGS 394
Query: 480 DELVQ 484
E+++
Sbjct: 395 AEIIR 399
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 179/449 (39%), Gaps = 90/449 (20%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
RIL H G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPENCT 206
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ E + +SD V +++
Sbjct: 207 NACRKILEVMQQEATNTNKSD------------------------------VILKILAHN 236
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+G ++GK G I+++ ET+T+I + ++ E I+ V G I N+ A A
Sbjct: 237 NLIGRIIGKEGNTIKRIMSETETKITVSSFNY---------ERIITVKGSIENMSKAEAQ 287
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG----SNYR 316
IS++LR+S F L S P P ++ A S G + G ++Y+
Sbjct: 288 ISAKLRQS-------FENDLQS---MAPQTVMFPGLHPMAMM-SATGITYPGRGGPTSYQ 336
Query: 317 SNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
+ P P + P++ ++ E + P VG +IG + +
Sbjct: 337 --QFAPAPYPPMYPSTIPPINPALAADVQETAF--LFIPNSAVGAIIGTKGSNIRSMIRF 392
Query: 377 IGVDLKVADPVD------------GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDL 424
G +KVA + S +Q + G D + AQ + ++ D
Sbjct: 393 SGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFD---KLRDE 449
Query: 425 GADKDN---IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTD 480
G +N +T +LVPSS++G + GR GS + E++R TG+ I++ ++ GT+
Sbjct: 450 GFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQ----GSTDGTE 505
Query: 481 E--LVQIVGEIQAARDALVEVTTRLRSYL 507
+ V I+G A + A R+RS +
Sbjct: 506 DTTTVHIIGHFLATQSA----QRRIRSMV 530
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 395 ITISSEEGPDDELFPAQEALLHIQTRIVD-LGADKDN-------IITTRLLVPSSEIGCL 446
+ IS+++ PD L PA + LL + RI D L + D + TRLLVP+S+ G L
Sbjct: 12 VMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSL 71
Query: 447 EGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
G+ G+ + ++ ++ ++IL E VP D +V+I GE A+ + + LR
Sbjct: 72 IGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRK 129
Query: 506 YL 507
+L
Sbjct: 130 FL 131
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ + +P+ +P PA + L +H RI + G GE ++ G VG
Sbjct: 15 SAKDEPDAPLP---PAVDGLLRVHKRITD-----GLDGESDQPQRAAGTVG--------- 57
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RIL S+P + +V++ G+
Sbjct: 58 --PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIL---ESVPPVALSDDRVVEIQGE 112
Query: 251 INNVKNAVAIISSRLRE 267
+V AV +I+S LR+
Sbjct: 113 PLDVHKAVELIASHLRK 129
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 35/333 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
+IQ+ S E +SG+ E QI I ++E R + YR
Sbjct: 139 SIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPRGATIPYRP------K 190
Query: 518 PSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSET 577
P TGP L A I A Q V P A+ ++ + + S +
Sbjct: 191 PQVTGPV--ILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAAL 248
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
S+ R P NR + E+ + + + +I K T + ++SGA +
Sbjct: 249 AALAGSQLRTANPA--NR-----AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMI 301
Query: 638 SLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
+ E + T + I ISG P+ V AQ ++
Sbjct: 302 RISNCEEREGGNTDRTITISGNPDSVALAQYLI 334
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + E + + +
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKKFEE-------WCSQFND 98
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
G + G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 99 VG----------KVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 135/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F ++ + G S ++ A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K A+PV+GS ++ +TI+
Sbjct: 270 GRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEISDTRRRDPEG 138
T + + + + G VIG+ GS IK I+ +GA +N E ++PG ERI+ +S
Sbjct: 172 TIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVA------ 225
Query: 139 RMPSFSPAQEALFLIHDRILESD-------GGGGFYGEEEEEYGG------GGGVGGGGF 185
A++ I +LE G G Y ++ + G G GG
Sbjct: 226 -----DAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGA 280
Query: 186 RGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLP-RCVSMSEE 243
G++ ++ + VG ++GK G I ++R +++ QIR+ P P + + E
Sbjct: 281 SAPGSQT-QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDER 339
Query: 244 IVQVVGDINNVKNAVAIISSRLRESQHR 271
+V + G N+ AV ++ RL + +
Sbjct: 340 LVTITGQPVNINIAVQMLYHRLEAEKAK 367
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+ R L A +IG++G+ + IR+ +GA + + E IPG+ ERI+ +
Sbjct: 89 SMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNV----------- 137
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ +A LI RI +E + G V + ++
Sbjct: 138 FGALDAVSKAFGLIVRRI------------NDEPFDVAS-------VPGSRAVTIKFIIP 178
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+GG I++ ++ + R+ + LP +E I+ V G + + AV
Sbjct: 179 NSRMGSVIGRGGSKIKE--IQDASGARLNASEVMLP---GSTERILSVSGVADAIHIAVY 233
Query: 260 IISSRLRESQHRD 272
I + L E Q R+
Sbjct: 234 YIGTILLEYQERN 246
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNAI 69
Query: 408 FPAQ-------EALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRS 459
F A E +Q+ +G K I T RL+VP+S+ G L G+ GS + E+R
Sbjct: 70 FKAFSLICKKFEEFQELQSGGGSMGIPKPPI-TLRLIVPASQCGSLIGKGGSKIKEIREV 128
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
TGA+IQ+ S E +P + T+ V I G +A + + +
Sbjct: 129 TGASIQVAS-EMLP---NSTERAVTISGTSEAITQCIYHICCVM 168
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 39/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DP+ +T T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 10 DPN--ITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 64
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
A+F I + + E +E GGG +G
Sbjct: 65 --------------PTNAIFKAFSLICKK------FEEFQELQSGGGSMG-----IPKPP 99
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 100 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSEAI 157
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 158 TQCIYHICCV 167
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 250
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 251 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 283
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 284 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 339
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 340 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 389
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 390 APPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 434
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 435 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 490
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 491 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 549
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 550 TPD--ENEEVIVRIIGHFFASQTA 571
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 128
Query: 462 ANIQIL-----SREEVPACVSGT-DELVQIVGEI 489
+ +Q+ + E +SGT D ++Q V +I
Sbjct: 129 SQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSTA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T +Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 151 TPDAIIQCVKQICVV 165
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TG+ + V +++P
Sbjct: 88 SNSTATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 159/394 (40%), Gaps = 66/394 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L G +IG+ GS I+ I Q++ A ++VH D +E + T +PE
Sbjct: 130 RLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHR---KDNVGSLEKAITIYGNPENCTS 186
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ RILE +E G + +++
Sbjct: 187 ACK-----------RILE------VMQQEANNTNKG-------------EICLKILAHNN 216
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I+N+ +
Sbjct: 217 LIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGSIDNMSRGESQ 272
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG--ARFSGSNYRSN 318
IS++LR+S D L FP + M+ G + G++Y
Sbjct: 273 ISAKLRQSYENDLQA----LAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGMYPGTSYPM- 327
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
Y P GA P S VQ + P + VG +IG + + G
Sbjct: 328 -YQP-----PTVPGAPPGSSDVQE------TTYLYIPNNAVGAIIGTKGSHIRNIIRFSG 375
Query: 379 VDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P++ E+ +TI G + + AQ + + D +T
Sbjct: 376 ASVKIAPLEADKPLEQQTERKVTIV---GTPEAQWKAQYLIFEKMREEGFVSGTDDVRLT 432
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
+LVPS+++G + G+ G ++ E++R TG+ I++
Sbjct: 433 VEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 466
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 168/419 (40%), Gaps = 72/419 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G IK++ + T + +++H + G E+ I I T PEG
Sbjct: 122 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHAT----PEG-- 175
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I D I++ + EE + +++
Sbjct: 176 -----CSEACRMILD-IMQKEADETKSAEE---------------------IPLKILAHN 208
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G NA
Sbjct: 209 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQD---LTIYNPERTITVKGSTEACSNAEVE 265
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
I +LRE+ D + +N A + G S S
Sbjct: 266 IMKKLREAYEND--------------------IVAVNQQANL--IPGLNLSALGIFSTGL 303
Query: 321 GPRPSGYSIEAGAAPMSDSVQPF-YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
PS S+ A A + PF E V + P VG +IG+ ++ L G
Sbjct: 304 SMLPS--SVGARGAAAAAPYHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGA 361
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 362 SIKIA-PAEGPDATERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 417
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 418 VPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVKIIGHFFASQTA 473
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D RML P VG +IG+ ++ L Q + VD+ + +++ I ++ EG
Sbjct: 118 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 177
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
+ A +L I + D + I ++L +S +G L G++G +L ++ + TG
Sbjct: 178 E----ACRMILDIMQKEADETKSAEE-IPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTK 232
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
I I +++ + + + + G +A +A VE+ +LR D
Sbjct: 233 ITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYENDI 278
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 140/358 (39%), Gaps = 71/358 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +V
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGVPQSV 155
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHS-PDRFFPDDDYV---------------PHMNN 298
V I + E+ + GR+ + P + P V PH +
Sbjct: 156 TECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 299 TARRPSMDGARFSGSNYRS-------NNYGPRPSGYSIEAGAAPMS--DSVQP---FYGE 346
P +D G + S N + S +++ G + DS P Y
Sbjct: 213 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 272
Query: 347 DL------VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
L + P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 273 SLDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 154/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH ++ P S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
VG L+GK G+ ++++ ET T+I I +D S + E + V G + NA I
Sbjct: 150 VGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACANAEIEI 205
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYG 321
+LRE+ D + + + +P +N +A G +G + G
Sbjct: 206 MKKLREAFENDMLAVNQQ----------ANLIPGLNLSAL-----GIFSTGLSVLPPPSG 250
Query: 322 PRPSGYSIEAGAAPMSDSVQPF--YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
PR AP + PF Y E + + P VG +IG+ ++ L G
Sbjct: 251 PR---------GAPPAAPYHPFAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGA 301
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 302 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 357
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 358 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 413
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ G V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTADG--------------------------VPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 72/361 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG----------- 345
P ++G + P+P +++ PM+ F G
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 274
Query: 346 --------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI
Sbjct: 275 WAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 334
Query: 398 S 398
+
Sbjct: 335 T 335
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 192 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST----PEG-- 245
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 246 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 278
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 279 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQ 334
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 335 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 372
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E V ++ P VG +IG+ ++ L
Sbjct: 373 SSAVPPPPSSVTGAAPYSSFMQA--PEQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 430
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 431 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 487
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 488 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 540
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 541 MAQRKIRDILAQV 553
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 150/358 (41%), Gaps = 61/358 (17%)
Query: 337 SDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
S S P ED L R++ +VG +IG+ IV + E G + ++D E
Sbjct: 9 SASGAPIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPE 66
Query: 393 QIITISSEEGPDDELFPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEG 448
+I+T+S G +F A + ++ D+G I RL+VP+S+ G L G
Sbjct: 67 RIVTVS---GTTSAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIG 123
Query: 449 RDGS-LSEMRRSTGANIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
+ GS + E+R++TG +IQ+ S E +SG+ E QI I ++E R
Sbjct: 124 KSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPR 181
Query: 503 LRSYLYRDFFQKETPPSSTGPT----GSALVVEAASPIDITPAREV-QTVTDPPAATHQS 557
+ YR P TGP G A ++ + P +EV + AA +
Sbjct: 182 GATIPYRP------KPQVTGPVILANGQAFTIQGNYAV---PTQEVSKNPLASLAALGLA 232
Query: 558 VQIPATS-----QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPD 612
PA++ AGS T N +++++ TV N +
Sbjct: 233 GMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDL---------------- 276
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQP-EG--TQKIIQISGTPEQVERAQSVL 667
+ +I K T + ++SGA + + + EG T + I ISG P+ V AQ ++
Sbjct: 277 --IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 332
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 60 NNSNNRANSNP---KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NN++ A+ P +DPS VT T R++ + G +IGK G I+ R+ +GA IN+ +
Sbjct: 4 NNTSGSASGAPIKLEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
ERI+ +S T A+F I + + E ++
Sbjct: 62 --GSCPERIVTVSGT---------------TSAIFAAFTLITKK------FEEWCSQFND 98
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
G V G ++ R++V G L+GK G I+++R T I++ LP +
Sbjct: 99 VGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLP--N 149
Query: 233 SLPRCVSMS---EEIVQVVGDI 251
S R V++S E+I Q + I
Sbjct: 150 STERAVTLSGSAEQITQCIYQI 171
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 34/187 (18%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D R+L P G +IG+ + L+++ + V D E+++T+SS+
Sbjct: 20 DEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDCP--GPERMLTLSSD------ 71
Query: 407 LFPAQEALLHIQTRIV-----DLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
+ + +I T +V + G N + R+++ S+ GC+ G+ G + E+R T
Sbjct: 72 ----LDTICNIVTDVVPNLEENGGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKT 127
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS------------YLY 508
GA I+I S TD ++QIVGE D++ E+ T ++S + Y
Sbjct: 128 GARIKIFSN----VAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNPIKGIVNPYDPHNY 183
Query: 509 RDFFQKE 515
D++ +E
Sbjct: 184 DDYYAEE 190
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 45/186 (24%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L AG +IGK G I +R A I V + PG E RM
Sbjct: 24 RLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDC-PGPE----------------RML 66
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ S + + I ++ + EE GG R GN + RM++ +
Sbjct: 67 TLSSDLDTICNIVTDVVPN----------LEENGG---------RVNGNELDLRMMIHQS 107
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD----INNVKNA 257
GC++GK G I+++R +T +I+I + P+ ++ I+Q+VG+ +++++
Sbjct: 108 QAGCVIGKAGYKIKELREKTGARIKIF--SNVAPQS---TDRIIQIVGEPSKCVDSIREI 162
Query: 258 VAIISS 263
+ +I S
Sbjct: 163 ITLIKS 168
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 65 RANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEE 123
R N N D R++ H +AG VIGK+G IK +R+ TGA I + + P +
Sbjct: 92 RVNGNELD--------LRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVAPQSTD 143
Query: 124 RIIEI 128
RII+I
Sbjct: 144 RIIQI 148
>gi|315042996|ref|XP_003170874.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
gi|311344663|gb|EFR03866.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
Length = 564
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 17/151 (11%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T +I+ D G VIG+SG ++ + + +G IN+ D E I+ R G
Sbjct: 286 TTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIAR----DGE---SINGLRPVTLTGS 338
Query: 140 MPSFSPAQEALFLIHDRILESDG-GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ A+E + I +ESD GG G+ E G GG GGG+++ +M +
Sbjct: 339 QQTIQRAKELILGI----VESDTRTGGNQGQREPR-----GQAAGGENGGGDKLNDKMFI 389
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILP 229
+ +VG ++GKGG+ I +++ + +I ILP
Sbjct: 390 PKEYVGMVIGKGGETIRELQSLSGCKINILP 420
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 51/351 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T+S G +
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--CSCPERIVTVS---GSRSAI 76
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+ A + D N I RL+VP+S+ G L G+ GS + E+R TG
Sbjct: 77 YKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITG 136
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTT-RLRSYLYRDFFQKETPPSS 520
+IQ+ S E +P + T+ V + G +A + + L S P
Sbjct: 137 CSIQVAS-EMLP---NSTERAVTLSGSAEAITQCIYHICCVMLESPPKGATIPYRPKPQV 192
Query: 521 TGPT----GSALVVEAASPIDITPAREVQTVTDPP----AATHQSVQIPATSQPSKEAAG 572
GP G A ++ + PA+EV + P AA + IP+ + G
Sbjct: 193 NGPVIVANGQAYTIQGNYAV---PAQEVSGIAKNPLAGLAALGLAGAIPSNT-------G 242
Query: 573 SVSETVKQNESERREDVP-------------TVINRVPLPLVTRSTLEVVLPDYAVPKLI 619
++ T K + E +P T NR P+ ++S E+ +P+ + +I
Sbjct: 243 GLNPTGKYSSPNALEYIPHAALAALAGSQLRTNNNRNVAPVQSQSH-EMTVPNDLIGCII 301
Query: 620 TKSKTLLTRFSEMSGASVSL--VEGQPEG-TQKIIQISGTPEQVERAQSVL 667
K T + ++SGA + + E + G T + I I+G P+ V AQ ++
Sbjct: 302 GKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLI 352
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 40/190 (21%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DP+ VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ +S +
Sbjct: 17 DPA--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGS 72
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
R S +A LI + E + + ++ G +
Sbjct: 73 R-----------SAIYKAFTLITKKFEE-------WCSQFQDNAN---------TQGKPQ 105
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++S E I
Sbjct: 106 IPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLP--NSTERAVTLSGSAEAI 163
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 164 TQCIYHICCV 173
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ R+++ VG ++GK G+I+++ R E+ +I I D S P E IV V G
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDCSCP------ERIVTVSGSR 73
Query: 252 NNVKNAVAIISSRLRE--SQHRDRSHFHGRLHSPDRFF 287
+ + A +I+ + E SQ +D ++ G+ P R
Sbjct: 74 SAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLI 111
>gi|401412830|ref|XP_003885862.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
gi|325120282|emb|CBZ55836.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
Length = 417
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDEERIIEISDTRRRDPEG 138
+++ +++ AG +IGK+G I ++ Q TG + + L PG ++R++ +S + +
Sbjct: 21 KMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQ---- 76
Query: 139 RMPSFSPAQEALFLIHDRILESD----GGGGFYGEEEEEYGGGGG----VGGGGFRGGGN 190
AL LI +I E+ G G G + G G G VG F G N
Sbjct: 77 -------VNNALVLILGKIKETVTSQFGAGTQTGTQPGSNGAGNGSAECVGRDPF--GSN 127
Query: 191 -----RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIV 245
++ R+ V R V ++GKGG+ I +++ T ++++ R+ L +E ++
Sbjct: 128 DASQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREEGL------AERMI 181
Query: 246 QVVGDINNVKNAVAIISSRLRESQHRDRSHFH 277
+ G + V+ A I+S ++ + R H H
Sbjct: 182 TITGLLEQVRAAALGIASCIQSDPYL-RDHMH 212
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 432 ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
IT RL VP S + + G+ G + E++ +TGA +Q+ REE A + ++ I G ++
Sbjct: 134 ITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREEGLA-----ERMITITGLLE 188
Query: 491 AARDALVEVTTRLRSYLY-RDFFQ 513
R A + + + ++S Y RD
Sbjct: 189 QVRAAALGIASCIQSDPYLRDHMH 212
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 135/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTASSR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F S+ + G S + A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 65/240 (27%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A+S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTASSRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEISDTRR---------------RDPEGRM------PSFSPA---- 146
V +++P ER I I+ + P+G PS SP
Sbjct: 132 QVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG 191
Query: 147 -------------QEALFLIHDRILE------SDGGGGFYGEE-----EEEYGGGGGVGG 182
Q L +H ++ S G GF G E E+ Y
Sbjct: 192 GQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGY-------W 244
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRIL-PRDHSLPRCVSMS 241
G + + + +GC++G+ G I ++R + QI+I P + S R V+++
Sbjct: 245 AGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
>gi|108862918|gb|ABG22073.1| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|215694782|dbj|BAG89973.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 355
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVD-LGADKDN-------IITTRLLVPSSEIGCLEG 448
IS+++ PD L PA + LL + RI D L + D + TRLLVP+S+ G L G
Sbjct: 2 ISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIG 61
Query: 449 RDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ G+ + ++ ++ ++IL E VP D +V+I GE A+ + + LR +L
Sbjct: 62 KQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFL 119
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ + +P+ +P PA + L +H RI + G GE ++ G VG
Sbjct: 3 SAKDEPDAPLP---PAVDGLLRVHKRITD-----GLDGESDQPQRAAGTVG--------- 45
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
TR++V G L+GK G I+ ++ +K +RIL S+P + +V++ G+
Sbjct: 46 --PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIL---ESVPPVALSDDRVVEIQGE 100
Query: 251 INNVKNAVAIISSRLRE 267
+V AV +I+S LR+
Sbjct: 101 PLDVHKAVELIASHLRK 117
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 17/146 (11%)
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
+ +VG +IG+ V+ ++ E G + +++ E+I+TI+ GP D +F A +
Sbjct: 52 LWEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAIFKAFAMIA 106
Query: 416 H-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQIL-- 467
+ I + + A +T RL+VP+S+ G L G+ GS + E+R STGA +Q+
Sbjct: 107 YKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD 166
Query: 468 ---SREEVPACVSGT-DELVQIVGEI 489
+ E +SGT D ++Q V +I
Sbjct: 167 MLPNSTERAVTISGTPDAIIQCVKQI 192
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 118 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 170
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 171 STERAVTISGT 181
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 58/348 (16%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI--- 128
D ++ VT T R+L H + G +IGK G +K IR+ + A IN+ E ERII I
Sbjct: 121 DGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE--GSCPERIITITGP 178
Query: 129 SDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGG 188
+D R M +F ++ + L+ + + S
Sbjct: 179 TDCVFR--AFTMITFKLEEDLMALVANGTVTSK--------------------------- 209
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
V R+V+ G L+GKGG I+++R T Q+++ LP +E V +
Sbjct: 210 -PPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQV--AGDLLPNS---TEREVTIS 263
Query: 249 GDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRP----S 304
G + + V +I + + ES + + + +P + V ++ P +
Sbjct: 264 GSQDAIIQCVKLICTVILESPPKGATIPYRPSPTPGTVLLAGNQVFEASDFGSHPLFSVA 323
Query: 305 MDGARFSGSNYRSNNYG-PRPSGYSI------EAGAAPMSDSV-QPFYG------EDLVF 350
G + ++YG P + + G AP+S S Q G +
Sbjct: 324 QGGVDLQQTYAVQSHYGIPHSELAKLHQLSMQQQGLAPISQSATQVLPGGVEANSQTTSQ 383
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+L P D +G +IG + ++ G +K+ +D + ++ +TIS
Sbjct: 384 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTIS 431
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G L R+L +VG +IG+ V+ ++ E + +++ E+IITI+ GP
Sbjct: 125 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE--GSCPERIITIT---GPT 179
Query: 405 DELFPAQEAL-LHIQTRIVDLGAD----KDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
D +F A + ++ ++ L A+ +T RL++P+S+ G L G+ GS + E+R
Sbjct: 180 DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRE 239
Query: 459 STGANIQI 466
+TGA +Q+
Sbjct: 240 TTGAQVQV 247
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 59/348 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH + +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMSL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVF 350
P ++G + P+P +++ PM+ F +
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 274
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +I + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 ELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 72/361 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG----------- 345
P ++G + P+P +++ PM+ F G
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 274
Query: 346 --------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI
Sbjct: 275 WAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 334
Query: 398 S 398
+
Sbjct: 335 T 335
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 138/351 (39%), Gaps = 62/351 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 214
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYGE-----D 347
+ P ++G + P+P +++ PM+ F
Sbjct: 215 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQ 274
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P + +G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 275 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 325
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 74/360 (20%)
Query: 342 PFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
P ED L R++ +VG +IG+ IV + E G + ++D E+I+T+
Sbjct: 14 PIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTV 71
Query: 398 SSEEGPDDELFPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS- 452
S G +F A + ++ D+G I RL+VP+S+ G L G+ GS
Sbjct: 72 S---GTTSAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSK 128
Query: 453 LSEMRRSTGANIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ E+R++TG +IQ+ S E +SG+ E QI I ++E R +
Sbjct: 129 IKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPRGATIP 186
Query: 508 YRDFFQKETPPSSTGPT----GSALVVEAASPIDITPAREVQTVTDP------------- 550
YR P TGP G A ++ + P +EV +P
Sbjct: 187 YRP------KPQVTGPVILANGQAFTIQGNYAV---PTQEV--AKNPLASLAALGLAGMN 235
Query: 551 PAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVL 610
PA+T A + AGS T N +++++ TV N +
Sbjct: 236 PASTGGINHTAALA----ALAGSQLRTANANRAQQQQHEMTVSNDL-------------- 277
Query: 611 PDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQP-EG--TQKIIQISGTPEQVERAQSVL 667
+ +I K T + ++SGA + + + EG T + I ISG P+ V AQ ++
Sbjct: 278 ----IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 333
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 44/202 (21%)
Query: 60 NNSNNRANSNP---KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NN+++ A P +DPS VT T R++ + G +IGK G I+ R+ +GA IN+ +
Sbjct: 4 NNTSSSAGGAPIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
ERI+ +S T S A LI + + E ++
Sbjct: 62 --GSCPERIVTVSGTT-----------SAIFSAFTLITKK----------FEEWCSQFND 98
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDH 232
G V G ++ R++V G L+GK G I+++R T I++ LP +
Sbjct: 99 VGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP--N 149
Query: 233 SLPRCVSMS---EEIVQVVGDI 251
S R V++S E+I Q + I
Sbjct: 150 STERAVTLSGSAEQITQCIYQI 171
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 144/340 (42%), Gaps = 45/340 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
+IQ+ S E +SG+ E QI I ++E R + YR
Sbjct: 139 SIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPRGATIPYRP------K 190
Query: 518 PSSTGPT----GSALVVEAASPIDITPAREVQTVTDPPAATHQSVQI---PATSQPSKEA 570
P TGP G A ++ + P +EV +P A+ PA++
Sbjct: 191 PQVTGPVILANGQAFTIQGNYAV---PTQEV--AKNPLASLAALGLAGMNPASTGGINHT 245
Query: 571 AGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFS 630
+ + S+ R P NR + E+ + + + +I K T +
Sbjct: 246 GSAPAALAALAGSQLRTANPA--NR-----AQQQQHEMTVSNDLIGCIIGKGGTKIAEIR 298
Query: 631 EMSGASVSLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
++SGA + + E + T + I ISG P+ V AQ ++
Sbjct: 299 QISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 338
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + + E +
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKK----------FEEWCSQ 95
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G V G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 96 FNDVGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 141/365 (38%), Gaps = 76/365 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 214
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG------- 345
+ P ++G + P+P +++ PM+ F G
Sbjct: 215 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPE 274
Query: 346 ------------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
+ + P D +G +IG + ++ G +K+A+PV+GS ++
Sbjct: 275 VKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 334
Query: 394 IITIS 398
+TI+
Sbjct: 335 QVTIT 339
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 141/365 (38%), Gaps = 76/365 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 22 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 78
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 79 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 111
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 112 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 167
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 168 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 226
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG------- 345
+ P ++G + P+P +++ PM+ F G
Sbjct: 227 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPE 286
Query: 346 ------------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
+ + P D +G +IG + ++ G +K+A+PV+GS ++
Sbjct: 287 VKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 346
Query: 394 IITIS 398
+TI+
Sbjct: 347 QVTIT 351
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 80
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 81 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 140
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 141 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 196
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 197 KPSSSPVI 204
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 87/433 (20%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S + P E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMXP---EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 436
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 437 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 493
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 494 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 546
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 547 MAQRKIRDILAQV 559
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+IQ+ S E +P + T+ V + G + + ++
Sbjct: 139 SIQVAS-EMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + E + + +
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKKFEE-------WCSQFND 98
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
G + G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 99 VG----------KVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 48/327 (14%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+ V I + ES + + + SP F Y + P D +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYT--IQGQYAIPQPDLTKLH 212
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+ +++ P + +A + S Q E + P D +G +IG +
Sbjct: 213 QLAMQQSHF---PMSHGNTGFSAGLDASAQTTSHE-----LTIPNDLIGCIIGRQGAKIN 264
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITIS 398
++ G +K+A+PV+GS ++ +TI+
Sbjct: 265 EIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 46/346 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 69
Query: 408 FPAQEALLHIQTRIVDLGADKDNI---------------ITTRLLVPSSEIGCLEGRDGS 452
F +A I + + + +I IT RL+VP+S+ G L G+ GS
Sbjct: 70 F---KAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGS 126
Query: 453 -LSEMRRSTGANIQILSR-----EEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRS 505
+ E+R TGA+IQ+ S E +SGT E + Q + I ++E + +
Sbjct: 127 KIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICC---VMLESPPKGAT 183
Query: 506 YLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAR-EVQTVTDPPAATHQSVQIPATS 564
YR Q P G G A ++ + PA ++ + P A+ ++ + +
Sbjct: 184 IPYRPKPQVGGPVILAG--GQAYTIQGNYAV---PAHSDMGKLGSNPLASLAALGLGGLA 238
Query: 565 QPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKT 624
P+ + + S+ R + NR P T E+ +P+ + +I K T
Sbjct: 239 TPANTGGLNPAALAALAGSQLRT---SNTNRQ-QPAANNQTHEMTVPNELIGCIIGKGGT 294
Query: 625 LLTRFSEMSGASVSLV---EGQPEGTQKIIQISGTPEQVERAQSVL 667
+ ++SGA + + E + T + I I+G P+ V AQ ++
Sbjct: 295 KIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLI 340
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 37/192 (19%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 10 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 64
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E F+ + GGGGGV +R
Sbjct: 65 ---------PTNS-IFKAFTLICKKFEEWC--SQFHDIQGGGAGGGGGV---------SR 103
Query: 192 --VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SE 242
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE
Sbjct: 104 PPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSE 161
Query: 243 EIVQVVGDINNV 254
I Q + I V
Sbjct: 162 AITQCIYHICCV 173
>gi|169622886|ref|XP_001804851.1| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
gi|160704873|gb|EAT77860.2| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 136/330 (41%), Gaps = 58/330 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR------VA 193
S S +A L+ +L+ G GG R G A
Sbjct: 97 --SLSGISKAYGLVAKGLLDGAPAMGM---------------GGVVRTDGTHQRKLTVTA 139
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+++S +G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G ++
Sbjct: 140 IRLLISHNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGSPSS 194
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
++ A+ I L + R + L++P N + +GA FS S
Sbjct: 195 IEKAIWEIGKCLIDDHERG---YGTVLYNPAGGATAGGMGGRSYNR----TGNGADFSDS 247
Query: 314 NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLV----FRMLCPIDKVGRVIGESEGI 369
P+ YS +G+ S P + ED V + P D VG +IG
Sbjct: 248 A---------PTSYSRRSGSDAASRPPPPTHDEDGVELQTQNISIPSDMVGCIIGRGGSK 298
Query: 370 VELLQNEIGVDLKVAD-PVDGSDEQIITIS 398
+ ++ G + +A P D + E++ TI+
Sbjct: 299 ISEIRKTSGARISIAKAPHDDTGERMFTIT 328
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 181/450 (40%), Gaps = 86/450 (19%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
RIL H G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPENCT 206
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ E + +SD V +++
Sbjct: 207 NACRKILEVMQQEATNTNKSD------------------------------VILKILAHN 236
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVA 259
+G ++GK G I+++ ET+T+I + S+ S + E I+ V G I N+ A A
Sbjct: 237 NLIGRIIGKEGNTIKRIMSETETKITV----SSINDINSFNYERIITVKGSIENMSKAEA 292
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG----SNY 315
IS++LR+S F L S P P ++ A S G + G ++Y
Sbjct: 293 QISAKLRQS-------FENDLQS---MAPQTVMFPGLHPMAMM-SATGITYPGRGGPTSY 341
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
+ + P P + P++ ++ E + P VG +IG + +
Sbjct: 342 Q--QFAPAPYPPMYPSTIPPINPALAADVQETAF--LFIPNSAVGAIIGTKGSNIRSMIR 397
Query: 376 EIGVDLKVADPVD------------GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD 423
G +KVA + S +Q + G D + AQ + ++ D
Sbjct: 398 FSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFD---KLRD 454
Query: 424 LGADKDN---IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGT 479
G +N +T +LVPSS++G + GR GS + E++R TG+ I++ ++ GT
Sbjct: 455 EGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQ----GSTDGT 510
Query: 480 DE--LVQIVGEIQAARDALVEVTTRLRSYL 507
++ V I+G A + A R+RS +
Sbjct: 511 EDTTTVHIIGHFLATQSA----QRRIRSMV 536
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 69 NPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERII 126
NP D M T I+ KAG VIGK G IKS+++ G + + + P + ++ +
Sbjct: 169 NPNDGPGM--TVQEIMIPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPL 226
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
IS + Q+A ++ D I + GF E+ EYG R
Sbjct: 227 RISGEPFK-----------VQQAKEMVMDLIRDQ----GFR-EQRGEYGS---------R 261
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
GG+ + + V R VG ++G+ G++I++++ +T +I+ P D S P + I Q
Sbjct: 262 VGGDSL--DVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTP------DRIAQ 313
Query: 247 VVGDINNVKNAVAIISSRLRESQ 269
++G N ++A II+ LR Q
Sbjct: 314 IMGPPNQAQHAADIITDLLRSVQ 336
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI---------------ITTRLLVPSSEIGCLEGRDGS 452
F +A I + + + ++ IT RL+VP+S+ G L G+ GS
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGS 129
Query: 453 -LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+ E+R TGA+IQ+ S E +P + T+ V I G +A + +
Sbjct: 130 KIKEIREVTGASIQVAS-EMLP---NSTERAVTISGTSEAITQCIYHI 173
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 33/190 (17%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E F+ GGGGGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE--WCSQFHDVPGSGAGGGGGV-------SRPP 108
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSEAI 166
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 167 TQCIYHICCV 176
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 56/339 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISE---GNCPERIITLAG--- 62
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 63 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 98
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 99 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 154
Query: 250 DINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP---- 303
I VK ++ L +S + + ++ SP F Y +P
Sbjct: 155 -IECVKQICVVMLETLSQSPPKGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 213
Query: 304 ----SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
+M + F ++ + G S ++ A + S Q E + P D +
Sbjct: 214 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLI 268
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 269 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 307
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V++ + E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKM-REESGARINISE--GNCPERIITLA---GPTNAI 67
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 68 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 127
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 128 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWP 183
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 184 KPSSSPVI 191
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 137/360 (38%), Gaps = 85/360 (23%)
Query: 58 SINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
S++ S R S + P L R+L AG VIGK G IK +R A +N+ +
Sbjct: 267 SLHYSRKRRRSGHEGPEL------RLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPD- 319
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
ER++ IS + + + + D I D G
Sbjct: 320 -SSTPERVLNISC-------ANVATLTDC------VSDLIPRLDDG-------------- 351
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
+ G RM+V + G ++G+ G I+++R T IR+ C
Sbjct: 352 --------KSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSE------C 397
Query: 238 VSMS-EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHM 296
+S E ++Q GD + NA+ + E+ + +R +
Sbjct: 398 APLSTERVIQFSGDKEKIVNAIRHVKEICEETP----------IKGVERLYD-------A 440
Query: 297 NNTARRPSMD-GARFSGSNYRSNNYGPRPSGYSIEAGAA------------PMSD---SV 340
NN ++D G + N+RSN+ R SG + AA PM S
Sbjct: 441 NNYDMSYALDYGGYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPMQALGYSP 500
Query: 341 QPFYGEDLV--FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
Y E+L+ ++ P + G +IG+ + ++ E G + V P SDE+IITIS
Sbjct: 501 MSLYAENLIATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITIS 560
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 38/247 (15%)
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA 492
R+LV S+ G + GR G + E+R TGA I++ S E P T+ ++Q G+ +
Sbjct: 360 VRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYS-ECAPL---STERVIQFSGDKEKI 415
Query: 493 RDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDI---TPAREVQT--V 547
+A+ V +ETP A + + +D T R ++
Sbjct: 416 VNAIRHVKE----------ICEETPIKGVERLYDANNYDMSYALDYGGYTTDRNWRSNST 465
Query: 548 TDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTR---S 604
T + H S PA S P +S + P+ L +
Sbjct: 466 TRRSSGIHSSS--PAASTPHFTGVNEISPM-------------QALGYSPMSLYAENLIA 510
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
T++V +P +I K + R E SGA + + P+ ++II ISGT Q++ Q
Sbjct: 511 TVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISGTTSQIKLGQ 570
Query: 665 SVLQGFI 671
+LQ I
Sbjct: 571 YLLQQCI 577
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 176/427 (41%), Gaps = 83/427 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ IK + + T + +++H + G E+ I I T PEG
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHST----PEG-- 255
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I D I++ + E+ + +++
Sbjct: 256 -----CSAACRMILD-IMQKEANETKTTED---------------------IPLKILAHN 288
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP-RCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I SL + E + V G I+ A
Sbjct: 289 SLVGRLIGKEGRNLKKIEEDTGTKITI----SSLQDLTIYNPERTITVKGSIDACCKAEV 344
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I+ +LRE+ D + + + + +P +N A G SG
Sbjct: 345 EITKKLREAYENDIAAINQQA----------NLIPGLNLNAL-----GIFSSGLPVLPPA 389
Query: 320 YGPR-------PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
GPR P+GY+ AP E V + P VG +IG+ ++
Sbjct: 390 AGPRSAVPAVAPAGYNPFLQQAP----------EQEVVYLFIPTQAVGALIGKKGQHIKQ 439
Query: 373 LQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
L + G +K+A P + D E+++ I+ G + F AQ + A ++
Sbjct: 440 LAHFAGASIKIA-PAESPDVTERMVIIT---GTPEAQFKAQGRIFGKLKEENFFSAKEEV 495
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGE 488
+ T + VPSS G + G+ G +++E++ T A + I+ R++ P DE V+I G
Sbjct: 496 KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGH 551
Query: 489 IQAARDA 495
A++ A
Sbjct: 552 FFASQTA 558
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 138/332 (41%), Gaps = 57/332 (17%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D RML P VG +IG+ ++ + Q + VD+ + +++ I S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
A +L I + + ++ I ++L +S +G L G++G +L ++ TG
Sbjct: 256 --CSAACRMILDIMQKEANETKTTED-IPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTK 312
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFF----QKETPPS 519
I I S +++ + + + + G I A A VE+T +LR D Q P
Sbjct: 313 ITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIP- 369
Query: 520 STGPTGSAL-VVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETV 578
G +AL + + P+ PPAA P ++ P+ AG
Sbjct: 370 --GLNLNALGIFSSGLPV------------LPPAAG------PRSAVPAVAPAGYNPFLQ 409
Query: 579 KQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVS 638
+ E E + + +P AV LI K + + + +GAS+
Sbjct: 410 QAPEQE--------------------VVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIK 449
Query: 639 LVEGQ-PEGTQKIIQISGTPEQVERAQSVLQG 669
+ + P+ T++++ I+GTPE +AQ + G
Sbjct: 450 IAPAESPDVTERMVIITGTPEAQFKAQGRIFG 481
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 75/193 (38%), Gaps = 35/193 (18%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEAL 150
G +IGK G IK + GA I + P + + E RM + EA
Sbjct: 427 GALIGKKGQHIKQLAHFAGASIKI---APAESPDVTE-----------RMVIITGTPEAQ 472
Query: 151 FLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKG 210
F RI F+ +EE ++ T + V G ++GKG
Sbjct: 473 FKAQGRIFGKLKEENFFSAKEE-----------------VKLETHIKVPSSAAGRVIGKG 515
Query: 211 GKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH 270
GK + +++ T ++ I+PRD + E V++ G + A I +++ +
Sbjct: 516 GKTVNELQNLTSAEV-IVPRDQTPDEN---DEVFVKISGHFFASQTAQRKIREIIQQVKQ 571
Query: 271 RDRSHFHGRLHSP 283
+++ H G SP
Sbjct: 572 QEQKHQQGAAVSP 584
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 131/342 (38%), Gaps = 67/342 (19%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D SL VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERI+ I+
Sbjct: 10 DGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGP 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
EG +FS +I + E D
Sbjct: 68 T----EGIFRAFS-------MIAQK-FEEDITAAMTNSNVTSK---------------PP 100
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V R+V G L+GKGG I+++R T Q+++ LP +E V + G
Sbjct: 101 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDS---TERAVTISGTP 155
Query: 252 NNVKNAVAIISSRLRES-------QHRDR---SHFHGRL---HSPDRF-FPDDDYVPHMN 297
+ V I S + ES +R + + H L HS F P H +
Sbjct: 156 QAITQCVRHICSVMLESPPKGATIPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQD 215
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPI 356
T + + + P PS G S P D+ P ++L P
Sbjct: 216 LTKL------------HQLAMQHIPLPSLGQS--NPTFPGLDASAPTSSQELAI----PN 257
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
D +G +IG + ++ G +K+A DGS + +TI+
Sbjct: 258 DFIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAMRQVTIT 299
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ S E+I+TI+ GP + +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTIT---GPTEGI 71
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + N+ +T RL+ P S+ G L G+ GS + E+R +TG
Sbjct: 72 FRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 131
Query: 462 ANIQI 466
A +Q+
Sbjct: 132 AQVQV 136
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 181/450 (40%), Gaps = 86/450 (19%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
RIL H G +IG+ GS I+ I Q T A ++VH D +E + T +PE
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPENCT 206
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ E + +SD V +++
Sbjct: 207 NACRKILEVMQQEATNTNKSD------------------------------VILKILAHN 236
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVA 259
+G ++GK G I+++ ET+T+I + S+ S + E I+ V G I N+ A A
Sbjct: 237 NLIGRIIGKEGNTIKRIMSETETKITV----SSINDINSFNYERIITVKGSIENMSKAEA 292
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG----SNY 315
IS++LR+S F L S P P ++ A S G + G ++Y
Sbjct: 293 QISAKLRQS-------FENDLQS---MAPQTVMFPGLHPMAMM-SATGITYPGRGGPTSY 341
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
+ + P P + P++ ++ E + P VG +IG + +
Sbjct: 342 Q--QFAPAPYPPMYPSTIPPINPALAADVQETAF--LFIPNSAVGAIIGTKGSNIRSMIR 397
Query: 376 EIGVDLKVADPVD------------GSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD 423
G +KVA + S +Q + G D + AQ + ++ D
Sbjct: 398 FSGASVKVASTENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFD---KLRD 454
Query: 424 LGADKDN---IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGT 479
G +N +T +LVPSS++G + GR GS + E++R TG+ I++ ++ GT
Sbjct: 455 EGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKLPTQ----GSTDGT 510
Query: 480 DE--LVQIVGEIQAARDALVEVTTRLRSYL 507
++ V I+G A + A R+RS +
Sbjct: 511 EDTTTVHIIGHFLATQSA----QRRIRSMV 536
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 99/444 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 183 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 236
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 237 -----TSEACRMILE-IMQKEAEETKLAEE---------------------IPLKILAHN 269
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + A
Sbjct: 270 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACACAEI 325
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA------------------- 300
I +LRE+ D + + + +P +N +A
Sbjct: 326 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSALGIFSTGLSVLSPPAGPRG 375
Query: 301 ------RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
P + + S Y + +GP P +S Y E + +
Sbjct: 376 APPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHS---------------YPEQEIVNLFI 420
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQE 412
P VG +IG+ ++ L G +K+A P +G D E+++ I+ GP + F AQ
Sbjct: 421 PTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQG 476
Query: 413 ALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
+ ++ + + VPSS G + G+ G +++E++ T A + I+ R++
Sbjct: 477 RIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 535
Query: 472 VPACVSGTDELVQIVGEIQAARDA 495
P + +V+I+G A++ A
Sbjct: 536 TPD--ENEEVIVRIIGHFFASQTA 557
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 42/336 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S S +A L +LE G GG R G R+++S
Sbjct: 97 --SLSGISKAYGLAAKGLLEGAPAMGM---------------GGVIRTDGTH-PIRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGSPAGIEKAVW 193
Query: 260 IISSRLRESQHRDRSHFHGRLHSPD-RFFPDDDYVPHMN-NTARRPSMDGARFSGSNYRS 317
I L + R + L++P R P P N +A M G R
Sbjct: 194 EIGKCLIDDHERG---YGTVLYNPAVRVQPGVGPGPAANGGSAPAGGMGGGRSYNRTGHG 250
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELL 373
++ P +S +G+ S P + ED + P D VG +IG + +
Sbjct: 251 ADFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEI 310
Query: 374 QNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELF 408
+ + +A P D + E++ TI+ +++
Sbjct: 311 RKTSNARISIAKAPHDDTGERMFTITGSASANEKAL 346
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 48/327 (14%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+ V I + ES + + + SP F Y + P D +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYT--IQGQYAIPQPDLTKLH 212
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+ +++ P + +A + S Q E + P D +G +IG +
Sbjct: 213 QLAMQQSHF---PMTHGNTGFSAGLDASAQTTSHE-----LTIPNDLIGCIIGRQGAKIN 264
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITIS 398
++ G +K+A+PV+GS ++ +TI+
Sbjct: 265 EIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 178/433 (41%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACRMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I+ ++RE+ D + + H +P +N + +
Sbjct: 342 EITKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S +GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVSGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVVVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 140/361 (38%), Gaps = 72/361 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYV--PHMN-NTAR 301
V I V ++ ++ R F G DR+ D PH +
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDSASFPHTTPSMCL 214
Query: 302 RPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG----------- 345
P ++G + P+P +++ PM+ F G
Sbjct: 215 NPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 274
Query: 346 --------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
+ + P D +G +IG + ++ G +K A+PV+GS ++ +TI
Sbjct: 275 WAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTI 334
Query: 398 S 398
+
Sbjct: 335 T 335
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 141/361 (39%), Gaps = 77/361 (21%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRD-----------HSLPRCVS 239
R+VV G L+GKGG I+++R T Q+++ LP S+ CV
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVK 160
Query: 240 -----MSEEIVQV-VGDINNVKNAVAIISSRLRESQHRDR-SHFHGRLHSPDRF--FPDD 290
M E + Q G + + SS + + +DR S G H+ P D
Sbjct: 161 QICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLD 220
Query: 291 DY------------VPHMNNTARRPSMDGARFSGSNYRS-NNYGPRPSGYSIEAGAAPMS 337
Y + +N AR+ S G+ + ++ P GY A +
Sbjct: 221 AYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-----WASLD 275
Query: 338 DSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
S Q + + P + +G +IG + ++ G +K+A+PV+GS + +TI
Sbjct: 276 ASTQTTH------ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
Query: 398 S 398
+
Sbjct: 330 T 330
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 152/352 (43%), Gaps = 54/352 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L S
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQ 172
Query: 522 GPTGSALVV-----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ P ATH P + S + ++S
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAY-SIQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
+ K N+ R++ +++ L T++T E+ +P+ +
Sbjct: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+I + + +MSGA + + + + + I+G+ + AQ ++
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ GP + +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GPTNSI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI---------------ITTRLLVPSSEIGCLEGRDGS 452
F +A I + + + +I IT RL+VP+S+ G L G+ GS
Sbjct: 73 F---KAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGS 129
Query: 453 -LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ E+R TGA+IQ+ S E +P + T+ V I G +A + + +
Sbjct: 130 KIKEIREVTGASIQVAS-EMLP---NSTERAVTISGTSEAITQCIYHICCVM 177
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 33/190 (17%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DPS VT T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ ++
Sbjct: 13 DPS--VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG- 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ S +A LI + E F+ + GGGGGV
Sbjct: 68 ---------PTNS-IFKAFTLICKKFEE--WCSQFHDIQGGGAGGGGGV-------SRPP 108
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSM---SEEI 244
+ R++V G L+GKGG I+++R T I++ LP +S R V++ SE I
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLP--NSTERAVTISGTSEAI 166
Query: 245 VQVVGDINNV 254
Q + I V
Sbjct: 167 TQCIYHICCV 176
>gi|358343600|ref|XP_003635888.1| Poly(rC)-binding protein [Medicago truncatula]
gi|358344098|ref|XP_003636130.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355501823|gb|AES83026.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355502065|gb|AES83268.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 241
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 38/240 (15%)
Query: 440 SSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVE 498
SS++G + G+ G ++S +R ++G+NI++ P C + +EL+ I G + +AL +
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVC---PAPHCAAKDEELILITGGYRCIENALRK 84
Query: 499 VTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVT-DPPAATHQS 557
+T+ +R+ P + ++ EA I P+ + T T +
Sbjct: 85 ITSIIRN----------------NPLTNEVLAEA----RIKPSFPLNKDTVRSKFITRKK 124
Query: 558 VQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVP------LPLVTRSTLEVVLP 611
P P + A ++ V +N E +I V + VT +T+E+++
Sbjct: 125 SSFPFARVPPQNAGVYQAKKVTENG----ESHTNLIENVEPGRGNIVATVTNTTVEIIVS 180
Query: 612 DYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQ--KIIQISGTPEQVERAQSVLQG 669
++ + + L R ++SGA V++ + GT K++ ISGTP+Q AQS+LQ
Sbjct: 181 EHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVV-ISGTPDQTFAAQSLLQA 239
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
VG ++GKGGK I +R + + IR+ P P C + EE++ + G ++NA+ I
Sbjct: 30 QVGAIVGKGGKNISNIRNNSGSNIRVCP----APHCAAKDEELILITGGYRCIENALRKI 85
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFFP-DDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
+S +R + + R+ FP + D V T ++ S AR N
Sbjct: 86 TSIIRNNPLTNEVLAEARIKPS---FPLNKDTVRSKFITRKKSSFPFARVP-----PQNA 137
Query: 321 GPRPSGYSIEAGAA--PMSDSVQPFYGE------DLVFRMLCPIDKVGRVIGESEGIVEL 372
G + E G + + ++V+P G + ++ G V GE G ++
Sbjct: 138 GVYQAKKVTENGESHTNLIENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDR 197
Query: 373 LQNEIGVDLKVADPVD-GSDEQIITISSEEGPDDELFPAQEAL 414
++ G D+ V DP G+ + IS G D+ F AQ L
Sbjct: 198 IRQISGADVTVFDPSSTGTSGGKVVIS---GTPDQTFAAQSLL 237
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 47/285 (16%)
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
SPAQEAL + D G V G G R+ ++V
Sbjct: 73 LSPAQEALVALLDS--------------------GWVVHLNGEAWGAERMTCLVLVEAGR 112
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS--EEIVQVVGDINNVKNAVAI 260
+ GKG I+ + E+ ++R+ P + EE+V++ GD V+ A+
Sbjct: 113 LEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGTTVRRALVS 170
Query: 261 ISSRLR-ESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
+SS L+ + + H + FP VP P M S R+N
Sbjct: 171 VSSCLQGDGPLGSSTSAHSVNPILTQTFPK---VPE-------PEMGSLYSDMSTERANT 220
Query: 320 YGPR---PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNE 376
P P G A ++ V F FR+LCP+ G +IG++ +++ ++
Sbjct: 221 SIPHIDCPQG----ATGIEQTECVMQFS-----FRLLCPVTLAGGLIGKNGMVIKAIEVN 271
Query: 377 IGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRI 421
G + V PV E+ IT+S+ E P + + A+L I R+
Sbjct: 272 SGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDRM 316
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
++R+LC AGG+IGK+G +IK+I ++GA ++V + ER I +S + +
Sbjct: 244 SFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQK-- 301
Query: 140 MPSFSPAQEALFLIHDRI 157
FS + A+ I DR+
Sbjct: 302 ---FSMVENAVLRIFDRM 316
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 35/333 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETP 517
+IQ+ S E +SG+ E QI I ++E R + YR
Sbjct: 139 SIQVASEMLPNSTERAVTLSGSAE--QITQCIYQICLVMLESPPRGATIPYRP------K 190
Query: 518 PSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSET 577
P TGP L A I A Q V P A+ ++ + + S +
Sbjct: 191 PQVTGPV--ILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAAL 248
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
S+ R P NR + E+ + + + +I K T + ++SGA +
Sbjct: 249 AALAGSQLRTANPA--NR-----AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMI 301
Query: 638 SLVEGQP-EG--TQKIIQISGTPEQVERAQSVL 667
+ + EG T + I ISG P+ V AQ ++
Sbjct: 302 RISNCEEREGGNTDRTITISGNPDSVALAQYLI 334
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + + E +
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKK----------FEEWCSQ 95
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G V G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 96 FNDVGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 176/438 (40%), Gaps = 87/438 (19%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRD 135
V R+L G +IGK G+ I++I + T + I+VH + G E+ I + T
Sbjct: 217 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST---- 272
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEG S + L ++H ++ + V +
Sbjct: 273 PEG---CSSACRMILEIMHKEAKDTKTA--------------------------DEVPLK 303
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNV 254
++ VG L+GK G+ ++++ +T T+I I +D +L E + V G I N
Sbjct: 304 ILAHNNFVGRLIGKEGRNLKKVEQDTDTKITISSLQDLTL----YNPERTITVKGAIENC 359
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
A I ++RE+ D + + H +P +N +
Sbjct: 360 CRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVG 397
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ P S GAAP S + P E + ++ P VG +IG+ ++ L
Sbjct: 398 LFPASSSAVPPPPSSVTGAAPYSSFMAP---EQEMVQVFIPAQAVGAIIGKKGQHIKQLS 454
Query: 375 NEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P S +++ I+ GP + F AQ + G ++ +
Sbjct: 455 RFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLE 511
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGE 488
T + VP+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G
Sbjct: 512 THIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGH 564
Query: 489 IQAA-------RDALVEV 499
A+ RD L +V
Sbjct: 565 FYASQMAQRKIRDILAQV 582
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILS 468
+IQ+ S
Sbjct: 139 SIQVAS 144
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T A+F I + + E +
Sbjct: 59 ISD--GSCPERIVTVSGTT---------------NAIFSAFTLITKK------FEEWCSQ 95
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G V G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 96 FNDVGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|328768071|gb|EGF78118.1| hypothetical protein BATDEDRAFT_90775 [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 89/331 (26%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEISDTRRRDPEGRMPSFSPAQ 147
KAG VIG+ G +K I + G I + P GD E+ I+ G + A
Sbjct: 172 KAGIVIGRGGETLKGIERQFGVRIQLEPSGPSGDIEKSAIIT--------GGLQEIEAAS 223
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGG---GGGVGGGGFRGGGNRVATRMVVSRMHVG 204
+A+ I + + GG G YG+ YG GGG+ + V + HVG
Sbjct: 224 KAVQEIINGTPRT-GGNGAYGQSAAPYGATPYGGGI------------TAHVQVPQAHVG 270
Query: 205 CLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSR 264
++GKGG+ I+ ++ + +I + + P + IV + G+ + V A +++
Sbjct: 271 LVIGKGGETIKSLQQRSGARITVAKETETEPGATT---RIVTIYGNEHAVATAQHMVNEI 327
Query: 265 LRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRP 324
++ Q + + YGP P
Sbjct: 328 IQHQQFQR-------------------------------------------QVTTYGPPP 344
Query: 325 SGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVA 384
G++ YG+ M+ KVG VIG ++ +Q E GV LKV
Sbjct: 345 GGFN--------------NYGQYCEVVMVSAT-KVGLVIGRGGETIKSIQGEYGVTLKVD 389
Query: 385 DPVDGSDEQIITISSEEGPDDELFPAQEALL 415
D + E+ + + G D + A+EA+
Sbjct: 390 PNTDANGERRVAVY---GQPDAVARAKEAVY 417
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 162/394 (41%), Gaps = 66/394 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L G +IG+ GS I+ I Q++ A ++VH D +E + T +PE
Sbjct: 129 RLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHR---KDNVGSLEKAITIYGNPENCTS 185
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ RILE +E G + +++
Sbjct: 186 AC-----------KRILE------VMQQEANNTNKG-------------EICLKILAHNN 215
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I+N+ +
Sbjct: 216 LIGRIIGKSGNTIKRIMQDTDTKITV----SSINDINSFNLERIITVKGSIDNMSRGESQ 271
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG--ARFSGSNYRSN 318
IS++LR+S D L FP + M+ G + GS+Y
Sbjct: 272 ISAKLRQSYENDLQA----LAPQSIMFPGLHPMAMMSTAGNGMGFAGRSGMYPGSSYPM- 326
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIG 378
Y P P+ + G++ + ++ + P + VG +IG + + G
Sbjct: 327 -YQP-PTAPGVPPGSSDVQETT----------YLYIPNNAVGAIIGTKGSHIRNIIRFSG 374
Query: 379 VDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P++ E+ +TI G + + AQ + + D +T
Sbjct: 375 ASVKIAPLEADKPLEQQTERKVTIV---GTPEAQWKAQYLIFEKMREEGFVSGTDDVRLT 431
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
+LVPS+++G + G+ G ++ E++R TG+ I++
Sbjct: 432 VEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 465
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 47/270 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK G IK ++ +GA I V + P R++E+ T +
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ- 194
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+A LI+D + E++ GG G+ G
Sbjct: 195 ----------IAKAEQLINDVLSEAEAGGS-------------GIVSRRLTGQAGSEQFV 231
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M V VG ++GKGG+ I+ M+ T +I+++P H P SM E VQ+ G ++
Sbjct: 232 MKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSM-ERTVQIDGTSEQIE 289
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+A +++ + E++ R+ + G +P Y AR PS GA
Sbjct: 290 SAKQLVNEVISENRIRNPAMAGG--------YPQQGY------QARPPSGWGAPPGAPPM 335
Query: 316 RSNNYG-PRPSGYSIEAGAAPMSDSVQPFY 344
+ Y +P Y G +P + QP Y
Sbjct: 336 QQPGYSYAQPGSY---PGPSPQYNMSQPAY 362
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 297 NNTARRPSMD-GARFSGSNYRSNNYGPRPSGYSIEAGAAPM--SDSVQPF-YGEDLVFRM 352
N A+RP ++ GA G + + PS + G PM + S P YG +
Sbjct: 84 NTEAKRPRVENGAGAGGFDSGDKGFSSAPS----DVGQKPMISTPSAIPVSYGYQGTSKK 139
Query: 353 L-CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
+ P +VG +IG+ ++ LQ + G ++V +D + G D++ A+
Sbjct: 140 IDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIAKAE 199
Query: 412 EALLHIQTRIVDLGADKDNIITTRLL-----------VPSSEIGCLEGRDG-SLSEMRRS 459
+ + + + + A I++ RL VP++++G + G+ G ++ M+
Sbjct: 200 QLINDV---LSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQAR 256
Query: 460 TGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTTRLR 504
TGA IQ++ P S + VQI G +I++A+ + EV + R
Sbjct: 257 TGARIQVIPLHLPPGDTS-MERTVQIDGTSEQIESAKQLVNEVISENR 303
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 48/327 (14%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
+ V I + ES + + + SP F Y + P D +
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYT--IQGQYAIPQPDLTKLH 212
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+ +++ P + +A + S Q E + P D +G +IG +
Sbjct: 213 QLAMQQSHF---PMTHGNTGFSAGLDASAQTTSHE-----LTIPNDLIGCIIGRQGAKIN 264
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITIS 398
++ G +K+A+PV+GS ++ +TI+
Sbjct: 265 EIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + E+ + SP P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLETLSQ----------SP----PKGVTIPYRP----KPSSSPVIFAGG 196
Query: 314 NYRS--NNYG-PRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVFRMLCPIDKV 359
+ Y P+P +++ PM+ F + + P D +
Sbjct: 197 QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLI 256
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 257 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE---RIIEISDTRRRDPEGR 139
I + + G +IGK+G I++++ +GA I + + D R +E+ T
Sbjct: 158 IEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGT-------- 209
Query: 140 MPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
+A LI I E++ GG GF G G G F
Sbjct: 210 ---LGSVDKAELLIKSVIAEAEAGGSPALIARGF---------GSGQPGSEQFE------ 251
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
M V VG ++GKGG I+ M+ ++ +I+++P+ P V+++E IV+V G+
Sbjct: 252 ---MTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIPQH--PPEGVTLTERIVRVTGNKK 306
Query: 253 NVKNAVAIISSRLRE--SQHRDRSHFHG 278
++ A +I + + S+H ++S +G
Sbjct: 307 QIELAKDLIKQAMNQTFSRHTNQSGGYG 334
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 43/208 (20%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEE---RIIEISDTRRRDPEGR 139
I + + G +IGK+G I++++ +GA I + + D R +E+ T
Sbjct: 151 IEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGT-------- 202
Query: 140 MPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
+A LI I E++ GG GF G G G F
Sbjct: 203 ---LGSVDKAELLIKSVIAEAEAGGSPALIARGF---------GSGQPGSEQFE------ 244
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
M V VG ++GKGG I+ M+ ++ +I+++P+ P V+++E IV+V G+
Sbjct: 245 ---MTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIPQH--PPEGVTLTERIVRVTGNKK 299
Query: 253 NVKNAVAIISSRLRE--SQHRDRSHFHG 278
++ A +I + + S+H ++S +G
Sbjct: 300 QIELAKDLIKQAMNQTFSRHTNQSGGYG 327
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 141/359 (39%), Gaps = 70/359 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPH------MNN 298
V I V ++ ++ R F G DR+ PH +N+
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSSGSASYPHTAPSMCLNS 214
Query: 299 TARRPSMDGARFSGSN-------------YRSNNYGPRPSGYSIEAGAAPMSDSVQPFY- 344
P + G ++ P G + +G S V+ ++
Sbjct: 215 DLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWA 274
Query: 345 -----GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ + P D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 275 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 141/339 (41%), Gaps = 56/339 (16%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 155
Query: 250 DINNVKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP---- 303
I VK ++ L +S + + + SP F Y +P
Sbjct: 156 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 214
Query: 304 ----SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
+M + F ++ + G S ++ A + S Q + + P + +
Sbjct: 215 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTH------ELTIPNNLI 268
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 269 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 307
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 142/337 (42%), Gaps = 47/337 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPT--------GSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIPATSQPSKEA 570
P+ G A ++ I D+T ++ TH + S E
Sbjct: 185 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV 244
Query: 571 AGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFS 630
G + L T++T E+ +P+ + +I + +
Sbjct: 245 KGYWAS---------------------LDASTQTTHELTIPNNLIGCIIGRQGANINEIR 283
Query: 631 EMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+MSGA + + + + + I+G+ + AQ ++
Sbjct: 284 QMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 320
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D+G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVT 500
+IQ+ S E +P + T+ V + G + + ++
Sbjct: 139 SIQVAS-EMLP---NSTERAVTLSGSAEQITQCIYQIC 172
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S A+ +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGASIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + + E +
Sbjct: 59 ISD--GSCPERIVTVSGTTNAI-------FS----AFTLITKK----------FEEWCSQ 95
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G V G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 96 FNDVGKV-------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
R+L P G +IG+ + L+ E + V D E+I+T++++
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDCP--GPERILTVAAD--------- 73
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILS 468
+ +L + + I+ + +++I R+LV S+ GC+ G+ G + E+R TGA I+I S
Sbjct: 74 -LDTMLRVVSEIL---PNLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYS 129
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
C TD +VQI G+ DA+ E L++
Sbjct: 130 N----CCPQSTDRIVQINGKGNLCVDAIRECMELLKT 162
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEA 149
AG +IGK GS I+ IR +GA I + E +PG +RII IS T + +M + Q
Sbjct: 302 AGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPNQI---QMAQYLLQQRL 358
Query: 150 LFLIH 154
++LIH
Sbjct: 359 VYLIH 363
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
P+L R+L H +AG +IGK G IK +R+ TGA I ++ P +RI++I+
Sbjct: 86 PNLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQIN 143
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 603 RSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVER 662
+++ +V +P +I K + + + SGA++++ E P +II ISGTP Q++
Sbjct: 290 KNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPNQIQM 349
Query: 663 AQSVLQ 668
AQ +LQ
Sbjct: 350 AQYLLQ 355
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ RM+V + GC++GKGG I+++R +T +I+I C ++ IVQ+ G
Sbjct: 92 IDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNC-----CPQSTDRIVQINGKG 146
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFF 287
N +A+ L+ S + ++ + H+ D +F
Sbjct: 147 NLCVDAIRECMELLKTSPIKGMNNPYDP-HNFDEYF 181
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 20/104 (19%)
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
++ALF +HD+++ + E+ EE ++V +++V+ +GC+
Sbjct: 56 EDALFRVHDKVVSEK----VHSEDFEE---------------ASQVTVQLLVTSDQIGCV 96
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+GKGG+II+ + E+ QI IL DH L C +E+VQ+ G+
Sbjct: 97 IGKGGQIIQNIYSESGAQIYILKNDH-LLSCALSFDELVQISGE 139
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 402 GPDD----ELFPAQE----ALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEG 448
GPDD +L+ +E AL + ++V ++ +T +LLV S +IGC+ G
Sbjct: 39 GPDDTVYIDLYALKERLEDALFRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQIGCVIG 98
Query: 449 RDGSLSE-MRRSTGANIQILSREEVPACVSGTDELVQIVGE 488
+ G + + + +GA I IL + + +C DELVQI GE
Sbjct: 99 KGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISGE 139
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 18/165 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV+ + E G + ++D E+I+T++ G + +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVT---GSTNAI 69
Query: 408 FPAQEALL----HIQTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
F A + ++ D+ + + IT RL+VP+S+ G L G+ GS + E+R
Sbjct: 70 FKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 129
Query: 459 STGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
TGA+IQ+ S E +P + T+ V I G +A + + T +
Sbjct: 130 VTGASIQVAS-EMLP---NSTERAVTISGTGEAITQCIYHICTVM 170
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 47/209 (22%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
M+N IN+ +N VT T R++ + G +IGK G I+K R+ +GA I
Sbjct: 1 MDNKNMINDDSN------------VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKI 48
Query: 113 NVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEE 172
N+ + ERI+ ++ S + +A LI + E + + ++
Sbjct: 49 NISD--GSCPERIVTVTG-----------STNAIFKAFTLICKKFEE------WCSQFQD 89
Query: 173 EYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----L 228
GG GV + R++V G L+GKGG I+++R T I++ L
Sbjct: 90 INSGGSGV-------PRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEML 142
Query: 229 PRDHSLPRCVSMS---EEIVQVVGDINNV 254
P +S R V++S E I Q + I V
Sbjct: 143 P--NSTERAVTISGTGEAITQCIYHICTV 169
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 177/438 (40%), Gaps = 86/438 (19%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRD 135
V R+L G +IGK G+ I++I + T + I+VH + G E+ I + T
Sbjct: 80 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST---- 135
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEG S + L ++H ++ + V +
Sbjct: 136 PEG---CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLK 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNV 254
++ VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N
Sbjct: 167 ILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENC 222
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
A I ++RE+ D + + H +P +N +
Sbjct: 223 CRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVG 260
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 261 LFPASSSAVPPPPSSVTGAAPYSSFMQ--APEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 318
Query: 375 NEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P S +++ I+ GP + F AQ + G ++ +
Sbjct: 319 RFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLE 375
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGE 488
T + VP+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G
Sbjct: 376 THIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGH 428
Query: 489 IQAA-------RDALVEV 499
A+ RD L +V
Sbjct: 429 FYASQMAQRKIRDILAQV 446
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 167/419 (39%), Gaps = 72/419 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G IK++ + T + +++H + G E+ I I T PEG
Sbjct: 184 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHAT----PEG-- 237
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I D I++ + EE + +++
Sbjct: 238 -----CSEACRMILD-IMQKEADETKSAEE---------------------IPLKILAHN 270
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG L+GK G+ ++++ +T T+I I P + E + V G NA
Sbjct: 271 SLVGRLIGKEGRNLKKIEQDTGTKITISPLQD---LTIYNPERTITVKGSTEACSNAEVE 327
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
I +LRE+ D + +N A + G S S
Sbjct: 328 IMKKLREAYEND--------------------IVAVNQQANL--IPGLNLSALGIFSTGL 365
Query: 321 GPRPSGYSIEAGAAPMSDSVQPF-YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
PS S A A + PF E V + P VG +IG+ ++ L G
Sbjct: 366 SMLPS--SAGARGAAAAAPYHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGA 423
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 424 SIKIA-PAEGPDATERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 479
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 480 VPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVKIIGHFFASQTA 535
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D RML P VG +IG+ ++ L Q + VD+ + +++ I ++ EG
Sbjct: 180 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 239
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
+ A +L I + D + I ++L +S +G L G++G +L ++ + TG
Sbjct: 240 E----ACRMILDIMQKEADETKSAEE-IPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTK 294
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
I I +++ + + + + G +A +A VE+ +LR D
Sbjct: 295 ITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYENDI 340
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQGMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 147 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 200
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 201 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 233
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 234 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 289
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 290 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 327
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 328 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 385
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 386 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 442
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 443 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 495
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 496 MAQRKIRDILAQV 508
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 176/429 (41%), Gaps = 78/429 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + +E V +++
Sbjct: 253 -----CSSACKMILE-IMQKEAKDTKTADE---------------------VPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGSIENCCKAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S +GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVSGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA----- 492
P+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYASQMAQR 551
Query: 493 --RDALVEV 499
RD L +V
Sbjct: 552 KIRDILAQV 560
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 184/444 (41%), Gaps = 81/444 (18%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
P + R+L G +IGK G+ I++I + T + I++H + G E+ I I T
Sbjct: 189 PKVQSDIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHST 248
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+G A I D I++ + + EE
Sbjct: 249 ----PDG-------CSNACKTIMD-IMQKEALDTKFTEE--------------------- 275
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGD 250
+ +++ VG L+GK G+ ++++ ET T+I I P +D +L E + V G
Sbjct: 276 IPLKILAHNSFVGRLIGKEGRNLKKIEQETGTKITISPLQDLTL----YNPERTITVKGS 331
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
I A + ++RES D + + L S + +P +N A A
Sbjct: 332 IEACAKAEEEVMKKIRESYESDMAAMN--LQS--------NLIPGLNLNALGLFPTTAPG 381
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
G + S+ P G S G P S++V F P VG +IG+ +
Sbjct: 382 MGPSM-SSITPPGAHGGSSSFGGHPESETVHLFI----------PALAVGAIIGKQGQHI 430
Query: 371 ELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADK 428
+ L + G +K+A P +G D ++++ I GP + F AQ + G +
Sbjct: 431 KQLSHFAGASIKIA-PAEGMDAKQRMVIIV---GPPEAQFKAQCRIFGKLKEENFFGPKE 486
Query: 429 DNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG 487
+ + + VP+ G + G+ G +++E++ T A + ++ R++ P DE Q++
Sbjct: 487 EVKLEAHIKVPAFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTP------DENDQVIV 539
Query: 488 EI-------QAARDALVEVTTRLR 504
+I Q A+ + E+ ++R
Sbjct: 540 KISGHFFACQLAQRKIQEILAQVR 563
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 154/384 (40%), Gaps = 68/384 (17%)
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
Y+P T P G R G N R GP SG S GA P S D+ R
Sbjct: 153 YIPDETATPEGPPAGGRR--GFNAR----GPPRSG-SPGLGARPKVQS-------DIPLR 198
Query: 352 MLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
ML P VG +IG+ + + Q +D+ + G+ E+ ITI S PD
Sbjct: 199 MLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENA-GAAEKPITIHST--PDGCSNA 255
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILS 468
+ + +Q +D ++ I ++L +S +G L G++G +L ++ + TG I I
Sbjct: 256 CKTIMDIMQKEALDTKFTEE--IPLKILAHNSFVGRLIGKEGRNLKKIEQETGTKITISP 313
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSAL 528
+++ + + + + G I+A A EV ++R D +A+
Sbjct: 314 LQDL--TLYNPERTITVKGSIEACAKAEEEVMKKIRESYESDM--------------AAM 357
Query: 529 VVEAASPIDITPAREVQTV-TDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESERRE 587
+++ ++ P + + P A + + + P A G S ESE
Sbjct: 358 NLQS----NLIPGLNLNALGLFPTTAPGMGPSMSSITPPG--AHGGSSSFGGHPESE--- 408
Query: 588 DVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSL--VEGQPE 645
T+ + +P AV +I K + + S +GAS+ + EG +
Sbjct: 409 -----------------TVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGM-D 450
Query: 646 GTQKIIQISGTPEQVERAQSVLQG 669
Q+++ I G PE +AQ + G
Sbjct: 451 AKQRMVIIVGPPEAQFKAQCRIFG 474
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 41 HRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSI 100
HRG N+ + +N++S N+ + T +L G VIGK G +
Sbjct: 275 HRGARGNDRSGSYSNDSSFNHGSG------------TTDGVEVLVPRAAVGVVIGKGGDM 322
Query: 101 IKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI 157
IK I+ TGA + E PGD + I+ G+ + ++ + + D +
Sbjct: 323 IKKIQAETGARVQFQQGREDGPGDRKCIL----------SGKHQAVEQVRQRIQELIDSV 372
Query: 158 LESDGGGGFYGEEEEEYGGGGG-------VGGGGFRGGG---NRVATRMVVSRMHVGCLL 207
+ D G G G G G GG R GG +++ T V G ++
Sbjct: 373 MRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETTFTVPSSKCGIII 432
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
GKGG+ I+Q+ +T + R+ S + +E+I + G+ V++A I S +L
Sbjct: 433 GKGGETIKQINQQTGAHCELDRRNQS-----NENEKIFIIRGNPEQVEHAKRIFSEKL 485
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEIS-DTRRRDPEGRM 140
I+ K G +IGK G IK +++ +GA + V + P E E+ + I+ D ++ + ++
Sbjct: 202 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 261
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A++ + + H +D G + + +G G G ++V R
Sbjct: 262 VYELIAEKEMQMFHRGARGNDRSGSYSNDSSFNHGSGTTDG------------VEVLVPR 309
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRI 227
VG ++GKGG +I++++ ET +++
Sbjct: 310 AAVGVVIGKGGDMIKKIQAETGARVQF 336
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 51/335 (15%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRS--HFHGRLHSPDRFFPDDDYVPHMNNTARRP-------- 303
+ V I + ES + + + SP F Y +P
Sbjct: 155 IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQL 214
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
+M + F ++ + G S ++ A + S Q E + P D +G +I
Sbjct: 215 AMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHE-----LTIPNDLIGCII 269
Query: 364 GESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ ++ G +K+A+PV+GS ++ +TI+
Sbjct: 270 RRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T R L +AG VIG+ G + IR+ V +L+PG ER++ ++
Sbjct: 142 TLIMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTG------- 194
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
S A LI I+ D G + Y G G+ + R++
Sbjct: 195 ----QISGVARAFGLICQTIM--DNSSGIPNDSPSTYTG----------LSGSTLTLRLL 238
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++GK G I+ ++ + T R+ LP+ +E +V++ G V+ A
Sbjct: 239 ISSAQMGGVIGKAGTKIKSIQQTSGT--RMAASKELLPQS---TERLVEISGRPEQVEKA 293
Query: 258 VAIISSRLRESQHR 271
VA I+ L E + +
Sbjct: 294 VAEIAKALVEDEAK 307
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 56 NTSINNSNNRANSNPKDPSLMV--TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
T ++NS+ N +P + + T T R+L + GGVIGK+G+ IKSI+Q +G +
Sbjct: 208 QTIMDNSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMA 267
Query: 114 V-HELIPGDEERIIEIS 129
EL+P ER++EIS
Sbjct: 268 ASKELLPQSTERLVEIS 284
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRR 134
+TT +I + + G +IGKSG IK ++ +GA I V ++ PG + R +++S T +
Sbjct: 142 STTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQ 201
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG---GGNR 191
S A+E LI D + E+D G G V + G +
Sbjct: 202 --------ISRAEE---LIRDVLAEADAGSS------------GTVSNRKYNAPQPGAEQ 238
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+M ++ VG ++GKGG+ I+ M+ ++ +I+++P LP + +E + + G
Sbjct: 239 F--QMQIANNKVGLVIGKGGETIKSMQAKSGARIQVIPLH--LPPGDTSTERTLYIDGTT 294
Query: 252 NNVKNAVAIISSRLRESQHRD 272
+ ++ A +++ E++ R+
Sbjct: 295 DQIEIAKQLVAEVTSENRARN 315
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 150/359 (41%), Gaps = 65/359 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++ G+
Sbjct: 48 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT--------GQ 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S + A ++ +LE G +G GG R+++S
Sbjct: 100 LRSLA---RAYAIVAKGLLE----------------GAPQMGMGGIVSNNGTHPVRLLIS 140
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 141 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 195
Query: 260 IISSRLRESQHRDRSHFHGRLHSP------DRFFPDDDYVP----HMNNTARRP---SMD 306
I L + R L++P P ++ P + NNT+ R + +
Sbjct: 196 EIGKCLLDDWQRGTGTV---LYNPAVRASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGN 252
Query: 307 GARFS--GSNYRSN-NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVI 363
GA FS G N RSN + G R E G + ++ P D VG +I
Sbjct: 253 GADFSDGGYNRRSNSDAGNRGYPLVTEDGEEIQTQNIS------------IPADMVGCII 300
Query: 364 GESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
G + ++ G + +A P D + E++ TI S + + L+ E L +TR
Sbjct: 301 GRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTR 359
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR G+ ++E+RRS+GA I I + P +G + + I
Sbjct: 280 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISI---AKAPHDETG-ERMFTI 335
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 336 MGSAQANEKAL 346
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 109/284 (38%), Gaps = 45/284 (15%)
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
SPAQEAL + D G V G G R+ ++V
Sbjct: 139 LSPAQEALVALLDS--------------------GWVVHLNGEAWGAERMTCLVLVEAGR 178
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS--EEIVQVVGDINNVKNAVAI 260
+ GKG I+ + E+ ++R+ P + EE+V++ GD V+ A+
Sbjct: 179 LEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGTTVRRALVS 236
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
+SS L+ G L S + + P M S R+N
Sbjct: 237 VSSCLQGD---------GPLGSSTSAHSVNPILTQTFPKVPEPEMGSLYSDMSTERANTS 287
Query: 321 GPR---PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
P P G A ++ V F FR+LCP+ G +IG++ +++ ++
Sbjct: 288 IPHIDCPQG----ATGIEQTECVMQFS-----FRLLCPVTLAGGLIGKNGMVIKAIEVNS 338
Query: 378 GVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRI 421
G + V PV E+ IT+S+ E P + + A+L I R+
Sbjct: 339 GASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDRM 382
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
++R+LC AGG+IGK+G +IK+I ++GA ++V + ER I +S + +
Sbjct: 310 SFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQK-- 367
Query: 140 MPSFSPAQEALFLIHDRI 157
FS + A+ I DR+
Sbjct: 368 ---FSMVENAVLRIFDRM 382
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 49/225 (21%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRR 133
T T+ I + K G +IGK+G I++++ +GA I + E+ R +E+ T+
Sbjct: 157 ATNTHTIEVPNNKVGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRPVELVGTQE 216
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFR 186
+A LI I E++ GG GF G G G F
Sbjct: 217 S-----------IDKAEQLIKSVIAEAEAGGSPALIAKGF---------GPGQSGSEQFE 256
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
M V VG ++GKGG+ I+ M+ + +I+++P+ P +++E V+
Sbjct: 257 ---------MSVPDNKVGLIIGKGGETIKNMQTRSGARIQLIPQH--PPEGTTLTERTVR 305
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRS--------HFHGRLHSP 283
V G+ ++ A +I + + R+ S H H + H P
Sbjct: 306 VTGNKKQIEAAKELIKQAMNQVFARNTSQSGGYGQQHHHPQGHGP 350
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 174/420 (41%), Gaps = 76/420 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ IK + + T + +++H + G E+ I I T PEG
Sbjct: 202 RMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHST----PEG-- 255
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I D I++ + E+ + +++
Sbjct: 256 -----CSAACRMILD-IMQKEANETKTTED---------------------IPLKILAHN 288
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP-RCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I SL + E + V G I+ A
Sbjct: 289 SLVGRLIGKEGRNLKKIEEDTGTKITI----SSLQDLTIYNPERTITVKGSIDACCKAEV 344
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I+ +LRE+ D + + + + +P +N A G SG
Sbjct: 345 EITKKLREAYENDIAAINQQA----------NLIPGLNLNAL-----GIFSSGLPVLPPA 389
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
GPR + ++ AP E V + P VG +IG+ ++ L + G
Sbjct: 390 AGPRSAVPAVAPQQAP----------EQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGA 439
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P + D E+++ I+ G + F AQ + A ++ + T +
Sbjct: 440 SIKIA-PAESPDVTERMVIIT---GTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIK 495
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P DE V+I G A++ A
Sbjct: 496 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 551
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 56/328 (17%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D RML P VG +IG+ ++ + Q + VD+ + +++ I S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
A +L I + + ++ I ++L +S +G L G++G +L ++ TG
Sbjct: 256 --CSAACRMILDIMQKEANETKTTED-IPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTK 312
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
I I S +++ + + + + G I A A VE+T +LR D
Sbjct: 313 ITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI------------ 358
Query: 524 TGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPS-KEAAGSVSETVKQNE 582
A + + A+ I P ++ I ++ P AAG
Sbjct: 359 ---AAINQQANLI--------------PGLNLNALGIFSSGLPVLPPAAGP--------- 392
Query: 583 SERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEG 642
R VP V P + + + +P AV LI K + + + +GAS+ +
Sbjct: 393 ---RSAVPAV---APQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA 446
Query: 643 Q-PEGTQKIIQISGTPEQVERAQSVLQG 669
+ P+ T++++ I+GTPE +AQ + G
Sbjct: 447 ESPDVTERMVIITGTPEAQFKAQGRIFG 474
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 75/193 (38%), Gaps = 35/193 (18%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEAL 150
G +IGK G IK + GA I + P + + E RM + EA
Sbjct: 420 GALIGKKGQHIKQLAHFAGASIKI---APAESPDVTE-----------RMVIITGTPEAQ 465
Query: 151 FLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKG 210
F RI F+ +EE ++ T + V G ++GKG
Sbjct: 466 FKAQGRIFGKLKEENFFSAKEE-----------------VKLETHIKVPSSAAGRVIGKG 508
Query: 211 GKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQH 270
GK + +++ T ++ I+PRD + E V++ G + A I +++ +
Sbjct: 509 GKTVNELQNLTSAEV-IVPRDQTPDEN---DEVFVKISGHFFASQTAQRKIREIIQQVKQ 564
Query: 271 RDRSHFHGRLHSP 283
+++ H G SP
Sbjct: 565 QEQKHQQGAAVSP 577
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 141/361 (39%), Gaps = 91/361 (25%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-----------LIPGDEERIIEISD 130
R+L H AG +IG G+ IK +R++T I + + L+ G ER++E
Sbjct: 124 RLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKSERVVECVK 183
Query: 131 T-----RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGG-- 183
T +GR + P +D E G F EE GGG + G
Sbjct: 184 TMLELISEAPIKGRTQPYDPN------FYDETYEYGGFTMF-----EERGGGRRLMGSFP 232
Query: 184 --GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP---RDHSLPRCV 238
G R G+R RM SR +G+G LP RD+
Sbjct: 233 MRGSRSSGDRGYDRMPSSR------VGRG----------------PLPPSRRDYD----- 265
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH--SPDRFFPDDDYV--- 293
DI+ + SR+ R R+ G H DR++ D Y
Sbjct: 266 -----------DISPRRGPPPPHHSRVVRPSGRSRNMPMGHPHRGGDDRYY--DSYRGSD 312
Query: 294 PHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML 353
N+ RP G SG S+++ SG G SD P + ++
Sbjct: 313 ERSNDRRSRPDRYGDNMSGGYDNSSSWDSYQSG-----GRGSYSDMGGPV----ITTQVT 363
Query: 354 CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEA 413
P D G +IG+ ++ +++E G +K+ +P++GS+++IITI+ G D++ AQ
Sbjct: 364 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT---GTQDQIQNAQYL 420
Query: 414 L 414
L
Sbjct: 421 L 421
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 47 NNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQ 106
+N + +N++S ++ + + D V TT + D+ AG +IGK G IK IR
Sbjct: 327 DNMSGGYDNSSSWDSYQSGGRGSYSDMGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRH 385
Query: 107 HTGAWINVHELIPGDEERIIEISDTR 132
+GA I + E + G E+RII I+ T+
Sbjct: 386 ESGASIKIDEPLEGSEDRIITITGTQ 411
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 140/372 (37%), Gaps = 96/372 (25%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTASSR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIVQ 246
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSIIE 157
Query: 247 VVGDINNV--KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
V I V ++ ++ R F G DR+ PH PS
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSSGSASYPH-----TAPS 209
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAA-------------------PMSDSVQPFYG 345
M S+ GP Y+I+ A PMS F G
Sbjct: 210 M--------CLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSG 261
Query: 346 -------------------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADP 386
+ + P D +G +IG + ++ G +K+A+P
Sbjct: 262 VESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 321
Query: 387 VDGSDEQIITIS 398
V+GS ++ +TI+
Sbjct: 322 VEGSTDRQVTIT 333
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A+S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTASSRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 144/357 (40%), Gaps = 58/357 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R + +AG +IGK G + ++R TG V +++ G +R++ I+
Sbjct: 49 TLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITG------- 101
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+A ++ +LE G VG GG +++
Sbjct: 102 ----GCDAVSKAYAVVARSLLE----------------GAPSVGMGGVISANGTHPIKLL 141
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ A
Sbjct: 142 ISHNQMGTVIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERVVEVQGTPEGIQRA 196
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSP-----------DRFFPDDDYVPHMNNTARRPSMD 306
V I L + R L++P DR +P + T + +
Sbjct: 197 VWEICKCLVDDWQRGTGTV---LYNPVVRGGGQPLGGDRNYPQERSYGSSRVTR---TGN 250
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGE 365
GA F S+N G RP ++ AA GE+L + + P D VG +IG
Sbjct: 251 GADF------SSNSGGRPYNRRSDSDAASRGPPTHDENGEELQTQNISIPADMVGCIIGR 304
Query: 366 SEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
+ ++ G + +A P D S E++ TI S + + L+ E L +TR
Sbjct: 305 QGTKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKTR 361
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 157/358 (43%), Gaps = 54/358 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG++E V+ ++ E G +++ E+IIT++ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISE--GNCPERIITLT---GPTCAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A +++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMMINKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ S + +P + T++ + + Q+ + + ++ ET P
Sbjct: 129 AQVQV-SGDMLP---NSTEQAITVAVVPQSVTECVQQIC----------LVMLETLPQC- 173
Query: 522 GPTGSALVV-----EAASPIDITPAREVQT-VTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G + + A+SP+ ++ + P AT + + +P S + ++S
Sbjct: 174 -PQGRVMPIPYQPMPASSPVTCAGGQDRGSDAAGYPHAT-RDLGVPPLDACSTQGQHTIS 231
Query: 576 --ETVKQNESERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAV 615
K N+ R++ +++ R L T++T E+ +P+ +
Sbjct: 232 PLHLAKLNQVARQQSHIAMLHGGTGFAGIESSSPEVKGYRASLDASTQTTHELTIPNNLI 291
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + + +MSGA + + + + + I+G+ + AQ ++ + S
Sbjct: 292 GCIIGRQGVNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLFS 349
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 143/333 (42%), Gaps = 32/333 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ + L ++ E+I+TI+ GP D +
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTIT---GPTDAI 70
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + I + + A +T RL+VP+S+ G L G+ GS + E+R STG
Sbjct: 71 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 130
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ V I G DA+++ ++ + + T P
Sbjct: 131 AQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRP 182
Query: 522 GPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSV--QIPAT--SQPSKEAAGSVSET 577
P + ++ I + D HQ Q P T Q + G E
Sbjct: 183 KPASTPVIFAGGQAYTIQGQYAIPH-PDQLTKLHQLAMQQTPFTPLGQTTPAFPG---EK 238
Query: 578 VKQNESERREDV---PTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSG 634
+ + SE +++ + ++ P ST E+ +P+ + +I + T + +MSG
Sbjct: 239 LPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 294
Query: 635 ASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
A + + +++ I I+GTP + AQ ++
Sbjct: 295 AQIKIANATEGSSERQITITGTPANISLAQYLI 327
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
I NS + + + K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 85 ITNSMSNSTATSKPP-----VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDM 139
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 140 LPNSTERAVTISGT 153
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 176/429 (41%), Gaps = 78/429 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + +E V +++
Sbjct: 253 -----CSSACKMILE-IMQKEAKDTKTADE---------------------VPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGSIENCCKAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S +GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVSGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA----- 492
P+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYASQMAQR 551
Query: 493 --RDALVEV 499
RD L +V
Sbjct: 552 KIRDILAQV 560
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 135/363 (37%), Gaps = 75/363 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 39 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 89
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A L+ +LE G +G GG R+++S
Sbjct: 90 --PLQGTARAYALVAKGLLE----------------GAPQMGMGGIVNNNGTHPVRLLIS 131
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 132 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 186
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R + N A R S+ G+ ++ N
Sbjct: 187 EIGKCLIDDWQRGTGTI-------------------LYNPAVRASVGGSTSMNTSSVGNG 227
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYG--------------------EDLVFRMLCPIDKV 359
Y RP Y+ A SD YG E + P D V
Sbjct: 228 YSSRP--YNRTGNGADFSDGQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMV 285
Query: 360 GRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHI 417
G +IG + ++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 286 GCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 345
Query: 418 QTR 420
+TR
Sbjct: 346 KTR 348
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 269 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 324
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 325 MGSAQANEKAL 335
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 133/343 (38%), Gaps = 80/343 (23%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDIRSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI-- 251
+VV G L+GKGG I+++R T Q VQV GD+
Sbjct: 100 LSLVVPASQCGSLIGKGGCKIKEIRESTGAQ--------------------VQVAGDMLP 139
Query: 252 NNVKNAVAI--ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
N+ + A+ I I + E + F L SP P +P+ +PS
Sbjct: 140 NSTERAITIAGIPQSIIECV---KQIFVVMLESP----PKGVTIPYR----PKPSSSPVI 188
Query: 310 FSGSNYRS--NNYG-PRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVFRMLCP 355
F+G + Y P+P +I+ PM+ F + + P
Sbjct: 189 FAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTSHELTIP 248
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
D +G +IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 249 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 291
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I++ + + A +T L+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 309 RFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQP------FYGEDLVFRMLCPIDKVGRV 362
+++ SN NN P EA A M+ S P + D R+L P G +
Sbjct: 3 KYAQSNVE-NNRVPVAGIMKREADAGAMTGSGGPTSPHKRYRQGDDELRLLIPSKVAGSI 61
Query: 363 IGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIV 422
IG+ + L+++ + V D E+++TISS+ ++ E + +++
Sbjct: 62 IGKGGQNITKLRSQYKASIIVPDCP--GPERVLTISSDLPTVLQVL--NEVVPNLEENGS 117
Query: 423 DLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE 481
G+D+ I R+LV S+ GC+ G+ G + E+R TGA I+I S C TD
Sbjct: 118 RHGSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDR 170
Query: 482 LVQIVGEIQAARDALVEVTTRLRS 505
L+ I G+ D + E+ +++
Sbjct: 171 LISICGKPSTCIDCIRELIATIKT 194
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
NN N+ N S VT + AG +IGK G+ I+ IR +GA I + E +P
Sbjct: 373 NNQGNQGNMGSNKTSTQVTIPKDL------AGAIIGKGGARIRKIRSDSGAGITIDEPLP 426
Query: 120 GDEERIIEIS 129
G +RII I+
Sbjct: 427 GSNDRIITIT 436
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L AG +IGK G I +R A I V + PG ER++ IS +P
Sbjct: 50 RLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDC-PG-PERVLTISSD--------LP 99
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ L ++++ + + G +G +E + RM+V +
Sbjct: 100 TV------LQVLNEVVPNLEENGSRHGSDE--------------------IDVRMLVHQS 133
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD----INNVKNA 257
GC++GKGG I+++R +T +I+I H P ++ ++ + G I+ ++
Sbjct: 134 QAGCIIGKGGLKIKELREKTGARIKIY--SHCCPHS---TDRLISICGKPSTCIDCIREL 188
Query: 258 VAIISS 263
+A I +
Sbjct: 189 IATIKT 194
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 603 RSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVER 662
+++ +V +P +I K + + SGA +++ E P +II I+G P Q++
Sbjct: 385 KTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGLPSQIQM 444
Query: 663 AQSVLQGFILSTQD 676
AQ +LQ + D
Sbjct: 445 AQYLLQQSVHENAD 458
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 176/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 177/438 (40%), Gaps = 86/438 (19%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRD 135
V R+L G +IGK G+ I++I + T + I+VH + G E+ I + T
Sbjct: 58 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST---- 113
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PEG S + L ++H ++ + V +
Sbjct: 114 PEG---CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLK 144
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNV 254
++ VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N
Sbjct: 145 ILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENC 200
Query: 255 KNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSN 314
A I ++RE+ D + + H +P +N +
Sbjct: 201 CRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVG 238
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+ P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 239 LFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 296
Query: 375 NEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIIT 433
+K+A P S +++ I+ GP + F AQ + G ++ +
Sbjct: 297 RFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLE 353
Query: 434 TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGE 488
T + VP+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G
Sbjct: 354 THIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGH 406
Query: 489 IQAA-------RDALVEV 499
A+ RD L +V
Sbjct: 407 FYASQMAQRKIRDILAQV 424
>gi|296089737|emb|CBI39556.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 455 EMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
E+ TG NI ILS+E + S DE+VQI+GE+ A + LV++T RL++ L+
Sbjct: 104 EVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLKANLF 157
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 137/351 (39%), Gaps = 61/351 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFSMIIDK-LEEDISSSMTNSTASSK---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP +E + + G ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQSI 155
Query: 255 KNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFPDDDYVPHMNNTA--------RRP-- 303
V I + ES + + + + S F A RR
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHT 215
Query: 304 ---SMDGARFSGSNYRSNNYG-PRPS-----GYSIEAGAAPMSDSVQPFY-------GED 347
S+D G+ Y P+P +++ PMS S + +
Sbjct: 216 GGVSLDAVDLHGAYIIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQT 275
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS+++ +TI+
Sbjct: 276 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 177/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S AGAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVAGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
++ T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ IS +
Sbjct: 11 ISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISGST---- 64
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
E +FS LI ++ E + E + G +G G + R+
Sbjct: 65 EAIYKAFS-------LICTKVEE-------FIEMQNGKTGATAIGKCG-------MTLRL 103
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V G L+GKGG I+++R T QI++ LP+ +E V + G +++
Sbjct: 104 IVPASQCGSLIGKGGNKIKEIREATGAQIQV--ASDVLPQS---TERAVTLTGTRDSITQ 158
Query: 257 AVAIISSRLRES 268
+ I + + ES
Sbjct: 159 CIFHICAVMVES 170
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 22/185 (11%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
L R++ +VG +IG+ IV+ + E G + ++D E+I+TIS G +
Sbjct: 12 SLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTIS---GSTEA 66
Query: 407 LFPA-------QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
++ A E + +Q A +T RL+VP+S+ G L G+ G+ + E+R
Sbjct: 67 IYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIRE 126
Query: 459 STGANIQILS-----REEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
+TGA IQ+ S E ++GT D + Q + I A +VE + + YR
Sbjct: 127 ATGAQIQVASDVLPQSTERAVTLTGTRDSITQCIFHICA---VMVESPPKGVTIPYRAKP 183
Query: 513 QKETP 517
Q P
Sbjct: 184 QMGAP 188
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 392 EQIITISSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCL 446
E+I+TI+ GP D +F A + + I + + A +T RL+VP+S+ G L
Sbjct: 18 ERIVTIT---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSL 74
Query: 447 EGRDGS-LSEMRRSTGANIQIL-----SREEVPACVSGT-DELVQIVGEIQAARDALVEV 499
G+ GS + E+R STGA +Q+ + E +SGT D ++Q V +I ++E
Sbjct: 75 IGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVV---MLES 131
Query: 500 TTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI---DITPAREVQTVTDPPAATHQ 556
+ + YR TP G G A ++ I D+T ++ Q
Sbjct: 132 PPKGATIPYRPK-PASTPVIFAG--GQAYTIQGQYAIPHPDLTKLHQL---------AMQ 179
Query: 557 SVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVP 616
P Q + G E++ + ++ P ST E+ +P+ +
Sbjct: 180 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP----PASTHELTIPNDLIG 235
Query: 617 KLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+I + T + +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 236 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 292
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 50 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 102
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 103 STERAVTISGT 113
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 43/233 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK G IK ++ +GA I V + P R++E+ T +
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ- 194
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+A LI+D + E++ GG G+ G
Sbjct: 195 ----------IAKAEQLINDVLSEAEAGGS-------------GIVSRRLTGQAGSEQFV 231
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M V VG ++GKGG+ I+ M+ T +I+++P H P SM E VQ+ G ++
Sbjct: 232 MKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSM-ERTVQIDGTSEQIE 289
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGA 308
+A +++ + E++ R+ + G +P Y AR PS GA
Sbjct: 290 SAKQLVNEVISENRIRNPAMAGG--------YPQQGY------QARPPSGWGA 328
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
++ P +VG +IG+ ++ LQ + G ++V +D + G D++ A
Sbjct: 139 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIAKA 198
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLL-----------VPSSEIGCLEGRDG-SLSEMRR 458
++ + + + + A I++ RL VP++++G + G+ G ++ M+
Sbjct: 199 EQLINDV---LSEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQA 255
Query: 459 STGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTTRLR 504
TGA IQ++ P S + VQI G +I++A+ + EV + R
Sbjct: 256 RTGARIQVIPLHLPPGDTS-MERTVQIDGTSEQIESAKQLVNEVISENR 303
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 137/363 (37%), Gaps = 75/363 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 44 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A L+ +LE G +G GG R+++S
Sbjct: 95 --PLQGTARAYALVAKGLLE----------------GAPQMGMGGIVNNNGTHPVRLLIS 136
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 137 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 191
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R L++P A R S+ G+ ++ N
Sbjct: 192 EIGKCLIDDWQRGTGTI---LYNP----------------AVRASVGGSTSMNTSSVGNG 232
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYG--------------------EDLVFRMLCPIDKV 359
Y RP Y+ A SD YG E + P D V
Sbjct: 233 YNSRP--YNRTGNGADFSDGQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMV 290
Query: 360 GRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHI 417
G +IG + ++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 291 GCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 350
Query: 418 QTR 420
+TR
Sbjct: 351 KTR 353
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 274 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 329
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 330 MGSAQANEKAL 340
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 93/337 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--V 192
P+ + +A +I D+ LE D +R V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDISSSMTNST-----------------AASRPPV 98
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEIV 245
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ + I+
Sbjct: 99 TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIAGIPQSII 156
Query: 246 QVVGDINNVKNAVAIISSRLRESQHR----DRSHFHGRLHSPDRFFPDDDYVPHMNNTAR 301
+ V I V ++ + + Q+ D + H +L FP + H N
Sbjct: 157 ECVKQI-----CVVMLEAYTIQGQYAIPQPDLTKLH-QLAMQQSHFP----MTHGN---- 202
Query: 302 RPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGR 361
+G+S A+ + S + P D +G
Sbjct: 203 -----------------------TGFSAGLDASAQTTS----------HELTIPNDLIGC 229
Query: 362 VIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PV+GS ++ +TI+
Sbjct: 230 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 266
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 76/374 (20%)
Query: 46 NNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIR 105
N TN + + +A ++ MV RIL AG VIGK G IK++R
Sbjct: 16 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVE--LRILLQSKNAGAVIGKGGKNIKALR 73
Query: 106 QHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFL-----IHDRILES 160
A ++V + ERI+ IS E +E L L LES
Sbjct: 74 TDYNASVSVPD--SSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLES 131
Query: 161 DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRME 220
D + ++G R+++ + G ++G G I+++R
Sbjct: 132 DAVECLNYQH--------------YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELREN 177
Query: 221 TKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRL 280
T+T I++ C ++ +V + G + V + II + ES GR
Sbjct: 178 TQTTIKLFQE-----CCPQSTDRVVLIGGKPDRVVECIKIILDLISES------PIKGRA 226
Query: 281 HSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSV 340
D F D+ Y + G ++ RP G+
Sbjct: 227 QPYDPNFYDETY----------------DYGGFTMMFDDRRGRPVGF------------- 257
Query: 341 QPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE 400
P G + D G +IG+ ++ +++E G +K+ +P++GS+++IITI+
Sbjct: 258 -PMRGRE---------DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT-- 305
Query: 401 EGPDDELFPAQEAL 414
G D++ AQ L
Sbjct: 306 -GTQDQIQNAQYLL 318
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERIIEISDTRRRDPEGRM 140
R+L H AGG+IG G+ IK +R++T I + E P +R++ I R
Sbjct: 152 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDR------ 205
Query: 141 PSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
E + +I D I ES G FY +E Y GG R G V
Sbjct: 206 -----VVECIKIILDLISESPIKGRAQPYDPNFY---DETYDYGGFTMMFDDR-RGRPVG 256
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
M G ++GKGG+ I+Q+R E+ I+I D L + I+ + G +
Sbjct: 257 FPMRGREDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLE---GSEDRIITITGTQDQ 310
Query: 254 VKNAVAIISSRLRE 267
++NA ++ + +++
Sbjct: 311 IQNAQYLLQNSVKQ 324
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 58/357 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R + +AG +IGK G + ++R TG V +++ G +R++ I+
Sbjct: 49 TLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITG------- 101
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+A ++ +LE G VG GG +++
Sbjct: 102 ----GCDAVSKAYAVVARSLLE----------------GAPSVGMGGVISANGTHPIKLL 141
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ A
Sbjct: 142 ISHNQMGTVIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERVVEVQGTPEGIQRA 196
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSP-----------DRFFPDDDYVPHMNNTARRPSMD 306
V I L + R L++P DR +P + T + +
Sbjct: 197 VWEICKCLVDDWQRGTGTV---LYNPVVRGGGQPLGGDRNYPQERSYGSSRVTR---TGN 250
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGE 365
GA F S+N G RP ++ AA GE++ + + P D VG +IG
Sbjct: 251 GADF------SSNSGGRPYNRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGCIIGR 304
Query: 366 SEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
+ ++ G + +A P D S E++ TI S + + L+ E L +TR
Sbjct: 305 QGSKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKTR 361
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 174/429 (40%), Gaps = 79/429 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 143 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST----PEG-- 196
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A + + I++ + +E V +++
Sbjct: 197 --CSAACKMIL----EIMQKEAKDTKTADE---------------------VPLKILAHN 229
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 230 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQ 285
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 286 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 323
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S +GAAP S + P E + P VG +IG+ ++ L
Sbjct: 324 SSAVPPPPSSVSGAAPYSSFMPP---EQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASA 380
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 381 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 437
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAA----- 492
P+S G + G+ G +++E++ T A + ++ R++ P +V+I+G A+
Sbjct: 438 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKIIGHFYASQMAQR 494
Query: 493 --RDALVEV 499
RD L +V
Sbjct: 495 KIRDILAQV 503
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D SL VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERI+ I+
Sbjct: 10 DGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGP 67
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
EG +FS +I + E D
Sbjct: 68 T----EGIFRAFS-------MIAQK-FEEDITAAMTNSNVTSK---------------PP 100
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS---EEI 244
V R+V G L+GKGG I+++R T Q+++ LP S R V++S + I
Sbjct: 101 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLP--DSTERAVTISGTPQAI 158
Query: 245 VQVVGDINNV 254
Q V I +V
Sbjct: 159 TQCVRHICSV 168
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ S E+I+TI+ GP + +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTIT---GPTEGI 71
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + + N+ +T RL+ P S+ G L G+ GS + E+R +TG
Sbjct: 72 FRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 131
Query: 462 ANIQI 466
A +Q+
Sbjct: 132 AQVQV 136
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 41 HRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSI 100
HRG N+ + +N++S N+ + T +L G VIGK G +
Sbjct: 276 HRGARGNDRSGNYSNDSSFNHGSG------------TTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 101 IKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI 157
IK I+ TGA + E PGD + I+ G+ + ++ + + D +
Sbjct: 324 IKKIQAETGARVQFQQGREDGPGDRKCIV----------SGKHQAVEQVRQRIQELIDSV 373
Query: 158 LESDGGGGFYGEEEEEYGGGGG-------VGGGGFRGGG---NRVATRMVVSRMHVGCLL 207
+ D G G G G G GG R GG +++ T V G ++
Sbjct: 374 MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIII 433
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
GKGG+ I+Q+ +T + R+ S + +E+I + G+ V++A I S +L
Sbjct: 434 GKGGETIKQINQQTGAHCELDRRNQS-----NENEKIFIIRGNPEQVEHAKRIFSEKL 486
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 60/306 (19%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEIS-DTRRRDPEGRM 140
I+ K G +IGK G IK +++ +GA + V + P E E+ + I+ D ++ + ++
Sbjct: 203 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 262
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A++ + + H +D G + + +G G G ++V R
Sbjct: 263 VYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDG------------VEVLVPR 310
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP---RCVSMSEEIVQVVGDINNVKNA 257
VG ++GKGG +I++++ ET +++ P +C+ ++ A
Sbjct: 311 AAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCI------------VSGKHQA 358
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
V + R++E D DD +N R G F G+N
Sbjct: 359 VEQVRQRIQE--------------LIDSVMRRDD---GRSNIGARSGPRGNGF-GNNRNP 400
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
N YG G+ G PM D ++ + P K G +IG+ ++ + +
Sbjct: 401 NEYG----GWDRRQG-GPMQDKIETMF--------TVPSSKCGIIIGKGGETIKQINQQT 447
Query: 378 GVDLKV 383
G ++
Sbjct: 448 GAHCEL 453
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 155/395 (39%), Gaps = 54/395 (13%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS 142
I D G +IG+ G I ++ TG I + G ER+ ++ +R +
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSRE--------A 163
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
+ A+E + I ++ ++G G G GG + GF +++
Sbjct: 164 VNRAKELVLSIVNQRSRTEGIGDMGGSS------GGLMSHSGF--------VEIMIPGPK 209
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VG ++GKGG+ I+Q++ ++ ++ ++ S + E+ +++ GD V+ A ++
Sbjct: 210 VGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ-----EKPLRITGDPQKVEYAKQLVY 264
Query: 263 SRLRESQHRDRSHFHGRLHSPDRF--FPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
+ E ++ FH DR + +D H + T DG
Sbjct: 265 ELIAE---KEMQMFHRGARGNDRSGNYSNDSSFNHGSGTT-----DGVEV---------L 307
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVF---RMLCPIDKVGRVIGESEGIVELLQNEI 377
PR + + M +Q G + F R P D+ V G+ + + ++ Q
Sbjct: 308 VPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQR-- 365
Query: 378 GVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
++ D V D+ I + GP F G + I T
Sbjct: 366 --IQELIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFT 423
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREE 471
VPSS+ G + G+ G ++ ++ + TGA+ ++ R +
Sbjct: 424 VPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQ 458
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 41 HRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSI 100
HRG N+ + +N++S N+ + T +L G VIGK G +
Sbjct: 276 HRGARGNDRSGNYSNDSSFNHGSG------------TTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 101 IKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI 157
IK I+ TGA + E PGD + I+ G+ + ++ + + D +
Sbjct: 324 IKKIQAETGARVQFQQGREDGPGDRKCIV----------SGKHQAVEQVRQRIQELIDSV 373
Query: 158 LESDGGGGFYGEEEEEYGGGGG-------VGGGGFRGGG---NRVATRMVVSRMHVGCLL 207
+ D G G G G G GG R GG +++ T V G ++
Sbjct: 374 MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIII 433
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
GKGG+ I+Q+ +T + R+ S + +E+I + G+ V++A I S +L
Sbjct: 434 GKGGETIKQINQQTGAHCELDRRNQS-----NENEKIFIIRGNPEQVEHAKRIFSEKL 486
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 60/306 (19%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEIS-DTRRRDPEGRM 140
I+ K G +IGK G IK +++ +GA + V + P E E+ + I+ D ++ + ++
Sbjct: 203 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 262
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A++ + + H +D G + + +G G G ++V R
Sbjct: 263 VYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDG------------VEVLVPR 310
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP---RCVSMSEEIVQVVGDINNVKNA 257
VG ++GKGG +I++++ ET +++ P +C+ ++ A
Sbjct: 311 AAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCI------------VSGKHQA 358
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
V + R++E D DD +N R G F G+N
Sbjct: 359 VEQVRQRIQE--------------LIDSVMRRDD---GRSNIGARSGPRGNGF-GNNRNP 400
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
N YG G+ G PM D ++ + P K G +IG+ ++ + +
Sbjct: 401 NEYG----GWDRRQG-GPMQDKIETMF--------TVPSSKCGIIIGKGGETIKQINQQT 447
Query: 378 GVDLKV 383
G ++
Sbjct: 448 GAHCEL 453
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 90/184 (48%), Gaps = 26/184 (14%)
Query: 324 PSGYSIEAGAA--PMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDL 381
P+G + +AG++ P+ + V ED+ P + VG +IG + LQ+E G +
Sbjct: 87 PTGRTGQAGSSGGPIGN-VGGICNEDI----RVPDNMVGLIIGRGGEQITRLQSETGCKI 141
Query: 382 KVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTR------IVDLGADKDNIIT-- 433
++A G E++ T++ G + + A+E +L I + I D+G I++
Sbjct: 142 QMAPESGGLPERLCTLT---GSREAVNRAKELVLSIVNQRSRTEGIGDMGGSSGGIMSHS 198
Query: 434 --TRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL-----SREEVPACVSGTDELVQI 485
+++P ++G + G+ G ++ +++ +GA + ++ +E P ++G + V+
Sbjct: 199 GFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEY 258
Query: 486 VGEI 489
++
Sbjct: 259 AKQL 262
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 137/351 (39%), Gaps = 61/351 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFSMIIDK-LEEDISSSMTNSTASSK---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP +E + + G ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQSI 155
Query: 255 KNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFPDDDYVPHMNNTA--------RRP-- 303
V I + ES + + + + S F A RR
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHT 215
Query: 304 ---SMDGARFSGSNYRSNNYG-PRPS-----GYSIEAGAAPMSDSVQPFY-------GED 347
S+D G+ Y P+P +++ PMS S + +
Sbjct: 216 GGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQT 275
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS+++ +TI+
Sbjct: 276 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 23/171 (13%)
Query: 348 LVF-RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD----GSDEQIITIS-SEE 401
L F +ML G VIG++ I+ ++N+ G LK++ P + + E+++ + +E
Sbjct: 17 LCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLS-PTNSYFPNTQERVLVLCGKQE 75
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSE 455
++ L + + I T+ DK NI T R++VP S + + G+ G + +
Sbjct: 76 QINNALLIILDKIRQITTQNFQ---DKQNINTAPKYTCRIVVPKSAVSAIIGKGGQQIKQ 132
Query: 456 MRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRS 505
++ STGA IQI SRE+ G +E ++ I+G ++ D ++VT +++
Sbjct: 133 LQDSTGAKIQISSRED------GLNERIISIIGPFESISDTAIKVTNSIQN 177
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 138/351 (39%), Gaps = 61/351 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFSMIIDK-LEEDISSSMTNSTASSK---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIPQSI 155
Query: 255 KNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFPDDDYVPHMNNTA--------RRP-- 303
V I + ES + + + + S F A RR
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHT 215
Query: 304 ---SMDGARFSGSNYRSNNYG-PRPS-----GYSIEAGAAPMSDSVQPFY-------GED 347
S+D G+ Y P+P +++ PMS S + +
Sbjct: 216 GGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQT 275
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS+++ +TI+
Sbjct: 276 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 68/339 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNS---TERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + E+ + SP P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLETLSQ----------SP----PKGVTIPYRP----KPSSSPVIFAGG 196
Query: 314 NYRS--NNYG-PRPS-----GYSIEAGAAPMSDSVQPF------YGEDLVFRMLCPIDKV 359
+ Y P+P +++ PM+ F + + P D +
Sbjct: 197 QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLI 256
Query: 360 GRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G +IG + ++ G +K A+PV+GS ++ +TI+
Sbjct: 257 GCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A ++T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 140/365 (38%), Gaps = 74/365 (20%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISD 130
D L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG 63
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+A +I D+ LE D
Sbjct: 64 PTNA-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------P 96
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
V R+VV G L+GKGG I+++R T Q+++ LP + +E + + G
Sbjct: 97 LVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGI 151
Query: 251 INNVKNAVAIISSRLRES-------QHRDRSHFHGRLHS--PDRFFPDDDYV--PHMN-N 298
++ V I + ES +R + + + DR+ D PH +
Sbjct: 152 PQSIIECVKHICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 211
Query: 299 TARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG-------- 345
P ++G + P+P +++ PM+ F G
Sbjct: 212 MCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEV 271
Query: 346 -----------EDLVFRMLCPIDKVGRVIG-ESEGIVELLQNEIGVDLKVADPVDGSDEQ 393
+ + P D +G +IG + I E+ Q G +K+A+ V+GS ++
Sbjct: 272 KGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMS-GALIKIANTVEGSTDR 330
Query: 394 IITIS 398
+TI+
Sbjct: 331 QVTIT 335
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A ++T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 139/346 (40%), Gaps = 58/346 (16%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG- 63
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
P+ + +A +I D+ LE D
Sbjct: 64 ---------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PL 97
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
V R+VV G L+GKGG I+++R T Q+++ LP + +E + + G
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIP 152
Query: 252 NNVKNAVAIISSRLRESQHRDRS------------HFHGRLHSPDRFFPDDDYVPHMNNT 299
++ V I + ES + + F G DR+ D +
Sbjct: 153 QSIIECVKHICVVMLESPPKGVTIPYRPKPSSSPVIFAG---GQDRYSTGSDKAYTIQGQ 209
Query: 300 ARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFY------GEDLVFRML 353
P D + + +++ P G + +G S V+ ++ + +
Sbjct: 210 YAIPQPDLTKLHQLAVQQSHF-PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT 268
Query: 354 CPIDKVGRVIG-ESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
P D +G +IG + I E+ Q G +K+A+ V+GS ++ +TI+
Sbjct: 269 IPNDLIGCIIGCQGAKINEICQMS-GALIKIANTVEGSTDRQVTIT 313
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 168/410 (40%), Gaps = 92/410 (22%)
Query: 91 GGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEA 149
G +IGK G IK+I + T + +++H + G E+ + I T PEG EA
Sbjct: 26 GAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-------TSEA 74
Query: 150 LFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGK 209
+I + I++ + EE + +++ VG L+GK
Sbjct: 75 CRMILE-IMQKEADETKLAEE---------------------IPLKILAHNGLVGRLIGK 112
Query: 210 GGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRES 268
G+ ++++ ET T+I I +D S + E + V G + +A I +LRE+
Sbjct: 113 EGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEIEIMKKLREA 168
Query: 269 QHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYS 328
F +D + ++ + S Y + +GP P +S
Sbjct: 169 ------------------FENDMLAVNTHSG----------YFSSLYPHHQFGPFPHHHS 200
Query: 329 IEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD 388
Y E + + P VG +IG+ ++ L G +K+A P +
Sbjct: 201 ---------------YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAE 244
Query: 389 GSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCL 446
G D E+++ I+ GP + F AQ + ++ + + VPSS G +
Sbjct: 245 GPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRV 301
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 302 IGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQTA 348
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 41/218 (18%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI---SSEEGPDD 405
VFR+LC +VG +IG V + E G +KV E+ + I + +GP D
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 406 ELFPAQEA--LLHIQTRI---------------------------------VDLGADKDN 430
+ A ++ TR DLG +
Sbjct: 77 TCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAH 136
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMR-RSTGANIQILSREEVPACVSGTDELVQIVGE 488
+ T RLLVP+ + G L G+ G ++ E+R R+ GA++ + +VP C + D +V+I G+
Sbjct: 137 V-TLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGK 195
Query: 489 IQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGS 526
+ R A V L+ YL P+ P G+
Sbjct: 196 PKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGA 233
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T +R+LC + + GG+IG+ G ++ I TGA + V ER + I R RD
Sbjct: 15 TAVFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGP 74
Query: 138 GRMPSFSPAQEAL-----FLIHDRIL---ESDGG---GGFYGEEEEEYGGGGGVGGGGFR 186
G A+E +L R + E DG +++++ G GVGG
Sbjct: 75 G---DTCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLG 131
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
V R++V G L+GKGG+ I+++R + +P C + + +V+
Sbjct: 132 RSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVE 191
Query: 247 VVGDINNVKNAVAIISSRLRE 267
+ G +V+ A + L++
Sbjct: 192 IHGKPKDVRVAADAVFESLKD 212
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 168/419 (40%), Gaps = 92/419 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 128 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 181
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE V +++
Sbjct: 182 -----TSEACRMILE-IMQKEAEDTKLAEE---------------------VPLKILAHN 214
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G I+ NA
Sbjct: 215 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTIDACANAEM 270
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ F +D A S S Y N
Sbjct: 271 EIMKKLREA------------------FENDML---------------AVNSHSGYFPNM 297
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
Y G + P ++V F P VG +IG+ ++ L G
Sbjct: 298 YPHHHFGPFPHHHSYPEQETVNLF----------IPTQAVGAIIGKKGAHIKQLARFAGA 347
Query: 380 DLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D E+++ I+ GP + F AQ + ++ + +
Sbjct: 348 SIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 403
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G A++ A
Sbjct: 404 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENAEVIVRIIGHFFASQTA 459
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 138/351 (39%), Gaps = 61/351 (17%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFSMIIDK-LEEDISSSMTNSTASSK---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIPQSI 155
Query: 255 KNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFPDDDYVPHMNNTA--------RRP-- 303
V I + ES + + + + S F A RR
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHT 215
Query: 304 ---SMDGARFSGSNYRSNNYG-PRPS-----GYSIEAGAAPMSDSVQPFY-------GED 347
S+D G+ Y P+P +++ PMS S + +
Sbjct: 216 GGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQA 275
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+ P D +G +IG + ++ G +K+A+PV+GS+++ +TI+
Sbjct: 276 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 133/335 (39%), Gaps = 41/335 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S S +A L +LE G GG R G R+++S
Sbjct: 97 --SLSGISKAYGLAAKGLLEGAPAMGM---------------GGVIRTDGTH-PIRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E +V+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERVVEVQGSPAGIEKAVW 193
Query: 260 IISSRLRESQHRDRSHFHGRLHSPD-RFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSN 318
I L + R + L++P R P P N + G R
Sbjct: 194 EIGKCLIDDHERG---YGTVLYNPAVRVQPGVGPGPAANGGSAPAGGMGGRSYNRTGHGA 250
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQ 374
++ P +S +G+ S P + ED + P D VG +IG + ++
Sbjct: 251 DFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIR 310
Query: 375 NEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELF 408
+ +A P D + E++ TI+ +++
Sbjct: 311 KTSNARISIAKAPHDDTGERMFTITGSASANEKAL 345
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 38/210 (18%)
Query: 80 TYRIL-CHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
T RI+ + K G +IGKSG I++++ ++GA I + + D + TR + G
Sbjct: 152 TSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADAN-----APTRSVELVG 206
Query: 139 RMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+ S +A LI + I E+D GG GF G G G F
Sbjct: 207 TLESID---KAERLIKNVIAEADAGGSPALIARGF---------GSGQSGSEQFE----- 249
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
M+V VG ++GKGG+ I+ ++ + +I+++P+ P V+++E V++ G+
Sbjct: 250 ----MLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQH--PPEGVTLTERTVRITGNK 303
Query: 252 NNVKNAVAIISSRLRE--SQHRDRSHFHGR 279
++ A +I + + S+H +S +G+
Sbjct: 304 KQIEAAKDMIKQAMSQTFSRHGAQSGGYGQ 333
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R++ +VG +IG+ IV + E G + ++D E+I+T+S G + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--GSCPERIVTVS---GTTNAI 78
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + ++ D G I RL+VP+S+ G L G+ GS + E+R++TG
Sbjct: 79 FSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+IQ+ S E +P + T+ V + G + + ++ + R K
Sbjct: 139 SIQVAS-EMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAK 186
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 43/205 (20%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NNTS +S + +DPS VT T R++ + G +IGK G I+ R+ +GA IN
Sbjct: 3 DNNTS--SSAGGTSIKHEDPS--VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEE 173
+ + ERI+ +S T FS A LI + + E +
Sbjct: 59 ISD--GSCPERIVTVSGTTN-------AIFS----AFTLITKK----------FEEWCSQ 95
Query: 174 YGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LP 229
+ G +G ++ R++V G L+GK G I+++R T I++ LP
Sbjct: 96 FNDAGKIGK-------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP 148
Query: 230 RDHSLPRCVSMS---EEIVQVVGDI 251
+S R V++S E+I Q + I
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQI 171
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 181/445 (40%), Gaps = 84/445 (18%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
P + R+L G +IGK G I+++ + T + I++H + G E+ I I T
Sbjct: 189 PKVQSDIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHST 248
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
PEG + E I++ + + EE
Sbjct: 249 ----PEGSSNACRTIME--------IMQKEAIDTKFTEE--------------------- 275
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP-RCVSMSEEIVQVVGD 250
+ +++V VG L+GK G+ ++++ +T T+I I SL V E + V G
Sbjct: 276 IPLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITI----SSLQDLTVYNPERTITVKGA 331
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
I N A + ++RE+ D + + L S + +P +N A G
Sbjct: 332 IENCGRAEEEVMKKIREAYESDVAAMN--LQS--------NLIPGLNLNALGLFPSGTPG 381
Query: 311 SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIV 370
G + S GYS G P S++V F P VG +IG+ +
Sbjct: 382 MGPSMSSLPPPGAHGGYSF--GGNPESETVHLFI----------PTLAVGAIIGKQGQHI 429
Query: 371 ELLQNEIGVDLKVADPVDGSDEQ---IITISSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
+ L + G +K+A P +G D + +I + GP + F AQ + G
Sbjct: 430 KQLSHFAGASIKIA-PAEGMDPKHRMVIIV----GPPEAQFKAQCRIFGKLKEENFFGPK 484
Query: 428 KDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----L 482
++ + + VPS G + G+ G +++E++ T A + ++ R++ P DE +
Sbjct: 485 EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTP------DEKDQVI 537
Query: 483 VQIVGEI---QAARDALVEVTTRLR 504
V+I+G Q A+ + E+ ++R
Sbjct: 538 VKIIGHFFACQLAQRKIQEILAQVR 562
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 24/222 (10%)
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
Y+P + PS G R N GP SG S GA P S D+ R
Sbjct: 153 YIPDETASPEGPSEGGRR------SFNARGPPRSG-SPSLGARPKVQS-------DIPLR 198
Query: 352 MLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
ML P VG +IG+ + L Q +D+ + +++ I S+ EG +
Sbjct: 199 MLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSNACRT 258
Query: 410 AQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILS 468
E + Q +D ++ I ++LV ++ +G L G++G +L ++ + TG I I S
Sbjct: 259 IMEIM---QKEAIDTKFTEE--IPLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISS 313
Query: 469 REEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRD 510
+++ V + + + G I+ A EV ++R D
Sbjct: 314 LQDL--TVYNPERTITVKGAIENCGRAEEEVMKKIREAYESD 353
>gi|237844115|ref|XP_002371355.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|211969019|gb|EEB04215.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|221506360|gb|EEE31995.1| KH domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 412
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL---IPGDEERIIEISDTRRRDPEG 138
+++ +++ AG +IGK+G I ++ Q TG + + L PG ++R++ +S + +
Sbjct: 21 KMIVNNVAAGAIIGKNGIAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQ---- 76
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF-----------RG 187
AL LI +I E+ +G + G G G G
Sbjct: 77 -------VNNALVLILGKIKETVTS--HFGTSGTQSGAQAGSTGSGSPELARQAFGSDAA 127
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
+++ R+ V R V ++GKGG+ I +++ T ++++ R+ L +E ++ +
Sbjct: 128 AQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSSREEGL------AERMITI 181
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFH 277
G + V+ A I+S ++ + R H H
Sbjct: 182 SGVLEQVRAAALGIASCIQSDPYL-RDHMH 210
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 426 ADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQ 484
A + IT RL VP S + + G+ G + E++ +TGA +Q+ SREE A + ++
Sbjct: 126 AAAQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSSREEGLA-----ERMIT 180
Query: 485 IVGEIQAARDALVEVTTRLRSYLY-RDFFQKETPPSSTG 522
I G ++ R A + + + ++S Y RD P + G
Sbjct: 181 ISGVLEQVRAAALGIASCIQSDPYLRDHMHVVYKPGAPG 219
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 141/364 (38%), Gaps = 76/364 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 45 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 95
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A L+ +LE G +G GG R+++S
Sbjct: 96 --PLQGTARAYALVAKGLLE----------------GAPQMGMGGIVNNNGTHPVRLLIS 137
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 138 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 192
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSM-DGARFSGSNYRSN 318
I L + R L++P A R S+ G+ + + SN
Sbjct: 193 EIGKCLIDDWQRGTGTI---LYNP----------------AVRASVGTGSSINTNTTASN 233
Query: 319 NYGPRPSGYSIEAGAAPMSDSVQPFY-------------------GEDLVFRML-CPIDK 358
Y RP Y+ A SD Y GE++ + + P D
Sbjct: 234 GYNSRP--YNRTGNGADFSDGQSAGYSRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADM 291
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLH 416
VG +IG + ++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 292 VGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEA 351
Query: 417 IQTR 420
+TR
Sbjct: 352 EKTR 355
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 276 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 331
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 332 MGSAQANEKAL 342
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRR 134
+TT +I + + G +IGK+G IK ++ +GA I V ++ PG + R ++IS T +
Sbjct: 142 STTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQ 201
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGF------YGEEEEEYGGGGGVGGGGFRGG 188
A LI D + E+D G Y + G
Sbjct: 202 -----------ISRAEQLIIDVLAEADAGSSGTISNRKYNAPQP---------------G 235
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVV 248
+ +M ++ VG ++GKGG+ I+ M+ +++ +I+++P LP + +E + +
Sbjct: 236 AEQF--QMQIANNKVGLVIGKGGETIKSMQAKSQARIQVIPLH--LPPGDTSTERTLYID 291
Query: 249 GDINNVKNAVAIISSRLRESQHRDR 273
G ++ A ++S E++ R++
Sbjct: 292 GTAEQIEIAKQLVSEVTSENRARNQ 316
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 38/288 (13%)
Query: 392 EQIITISSEEGPDDELFPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCL 446
E+I+TI+ GP D +F A + + I + + A +T RL+VP+S+ G L
Sbjct: 37 ERIVTIT---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSL 93
Query: 447 EGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
G+ GS + E+R STGA +Q+ + + +P + T+ V I G DA+++ ++
Sbjct: 94 IGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISG----TPDAIIQCVKQICV 145
Query: 506 YLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQ 565
+ + T P P + ++ I IP Q
Sbjct: 146 VMLESPPKGATIPYRPKPASTPVIFAGGQAYTI----------------QGQYAIPHPDQ 189
Query: 566 PSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTL 625
+K ++ +T + P + P ST E+ +P+ + +I + T
Sbjct: 190 LTKLHQLAMQQTPFPPLGQTNPAFPGLDASPP-----ASTHELTIPNDLIGCIIGRQGTK 244
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILS 673
+ +MSGA + + +++ I I+GTP + AQ ++ + S
Sbjct: 245 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 292
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 69 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 121
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 122 STERAVTISGT 132
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRR 134
T ++IL + AG +IGK G I +++ GA + + ++ PG ER+ I+ +
Sbjct: 37 TFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSV-- 94
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
E + IH+ I+E +E+ + + +
Sbjct: 95 -------------EGVLRIHEFIMEKI-------KEKPDPTAKIAIDFDHKQPAEREKQV 134
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI--LPRDHSLPRCVSMSEEIVQVVGDIN 252
+++V G ++GKGG I+Q++ E+ ++I +DH+L +E + V+G+++
Sbjct: 135 KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHAL------AERCITVIGEMD 188
Query: 253 NVKNAVAIISSRLRE 267
N K A +I +++ E
Sbjct: 189 NNKKACQLILAKIVE 203
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD---GSDEQIITISSEEGPDDE 406
F++L P G +IG+ + LLQ E G +K++ D G+ E++ I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIIT-----------------TRLLVPSSEIGCLEGR 449
+ E +L I I++ +K + ++LVP+S G + G+
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL----- 503
GS + +++ +GA +QI + + A + + ++GE+ + A + ++
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHAL---AERCITVIGEMDNNKKACQLILAKIVEDPQ 206
Query: 504 -RSYLYRDFFQKETPPSSTGPTGS 526
S L+ + + P ++ PTGS
Sbjct: 207 SGSCLHVSYAEVTGPVANFNPTGS 230
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 137/326 (42%), Gaps = 43/326 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S S +A L +LE G GG R G R+++S
Sbjct: 97 --SLSGISKAYGLAAKGLLEGAPAMGM---------------GGVIRTDGTH-PIRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGSPAGIEKAVW 193
Query: 260 IISSRLRESQHRDRSHFHGRLHSP-DRFFPDDDYVPHMN-NTARRPSMDGARFSGSNYRS 317
I L + R + L++P R P P N +A SM G ++ + + +
Sbjct: 194 EIGKCLIDDHERG---YGTVLYNPVVRVQPGAGPGPLSNGGSAPSGSMGGRSYNRTGHGA 250
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVELL 373
++ P +S +G+ S P + ED + P D VG +IG + +
Sbjct: 251 -DFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGTKISEI 309
Query: 374 QNEIGVDLKVAD-PVDGSDEQIITIS 398
+ + +A P D + E++ TI+
Sbjct: 310 RKTSNARISIAKAPHDDTGERMFTIT 335
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 80
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 81 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 140
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 141 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 196
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 197 KPSSSPVI 204
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 139/364 (38%), Gaps = 75/364 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 22 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 78
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 79 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 111
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMSEEIVQVVG 249
R+VV G L+GKGG I+++R T Q+++ LP +S R ++++ I Q +
Sbjct: 112 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP--NSTERAITIA-GIPQSI- 167
Query: 250 DINNVKNAVAIISSRLRESQHRDRS-HFHGRLHSPDRFFP----------DDDYVPHMN- 297
I VK ++ L +S + + + + S F D PH
Sbjct: 168 -IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP 226
Query: 298 NTARRPSMDGARFSGSNYRSNNYGPRPS-----GYSIEAGAAPMSDSVQPFYG------- 345
+ P ++G + P+P +++ PM+ F G
Sbjct: 227 SMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPE 286
Query: 346 -----------EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQI 394
+ P + +G +IG + ++ G +K+A+PV+GS +
Sbjct: 287 VKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ 346
Query: 395 ITIS 398
+TI+
Sbjct: 347 VTIT 350
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 22/185 (11%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
L R++ +VG +IG+ IV+ + E G + ++D E+I+TIS G +
Sbjct: 12 SLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTIS---GSTEA 66
Query: 407 LFPA-------QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRR 458
++ A E + +Q A +T RL+VP+S+ G L G+ G+ + E+R
Sbjct: 67 IYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIRE 126
Query: 459 STGANIQILS-----REEVPACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFF 512
+TGA IQ+ S E ++GT D + Q + I A +VE + + YR
Sbjct: 127 ATGAQIQVASDVLPQSTERAVTLTGTRDSITQCIFHICA---VMVESPPKGVTIPYRAKP 183
Query: 513 QKETP 517
Q P
Sbjct: 184 QMGAP 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
++ T R++ + G +IGK G I+K R+ +GA IN+ + ERI+ IS
Sbjct: 11 ISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISG------ 62
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
S +A LI ++ E + E + G +G G R+
Sbjct: 63 -----STEAIYKAFSLICTKVEE-------FIEMQNGKTGATAIGKCGM-------TLRL 103
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V G L+GKGG I+++R T QI++ LP+ +E V + G +++
Sbjct: 104 IVPASQCGSLIGKGGNKIKEIREATGAQIQV--ASDVLPQS---TERAVTLTGTRDSITQ 158
Query: 257 AVAIISSRLRES 268
+ I + + ES
Sbjct: 159 CIFHICAVMVES 170
>gi|428180127|gb|EKX48995.1| hypothetical protein GUITHDRAFT_68316, partial [Guillardia theta
CCMP2712]
Length = 276
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWI---NVHELIPGDEERIIEISDTRRRDPEG 138
++L + AG VIGKSGS I+S++ TG I N ++ PG ++R++ I+ T
Sbjct: 2 QLLVSNKDAGTVIGKSGSTIQSVQSRTGCKIRISNNNDFFPGTQDRVLLITGT------- 54
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
EA+ + I+ GEE V M+V
Sbjct: 55 --------TEAVMMGAKAIITELLENNHTGEENP------------VDPATKDVVITMLV 94
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
G ++GKGG+ I+ M E+ ++++ +D +P + E ++ G + N K A+
Sbjct: 95 PEKTSGVIIGKGGENIKHMIEESGAKMKLNSKDTKIP---GLDERVLTCDGKLANAKRAM 151
Query: 259 AIISSRLRE 267
++ ++ E
Sbjct: 152 EMVMEKVLE 160
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 57 TSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
T + +N+ NP DP+ +L + +G +IGK G IK + + +GA + ++
Sbjct: 67 TELLENNHTGEENPVDPATK-DVVITMLVPEKTSGVIIGKGGENIKHMIEESGAKMKLNS 125
Query: 117 L---IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGF------Y 167
IPG +ER++ +G++ + A+ A+ ++ +++LE +G G+ Y
Sbjct: 126 KDTKIPGLDERVLTC--------DGKLAN---AKRAMEMVMEKVLE-EGAAGYTNISTQY 173
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVG-----CLLGKGGKIIEQMRMETK 222
G GG G GG + ++ V +HV LLGKGG +I +M +
Sbjct: 174 SRVSGMGGMGGMGGMGGGIPRTSNISNPTVTYTVHVPDEVVPALLGKGGSVIREMMEASG 233
Query: 223 TQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
QIR+ + +P + I+ + G+ ++ A +ISS++
Sbjct: 234 AQIRVSQKGEFVP---GTNHRIITITGNQHSASYAHQLISSKI 273
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 175/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V +++
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKILAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H +P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LIPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYGSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVVIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ ++ E G + ++D E+I+TI+ G +
Sbjct: 74 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 131
Query: 408 F-----PAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F +E +L + + IT R++VP+++ G L G+ GS + ++R +TG
Sbjct: 132 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 185
Query: 462 ANIQILSR-----EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKET 516
A+IQ+ S E +SGT + + + + L+EVT + S + F+ +
Sbjct: 186 ASIQVASEMLPHSTERAVTLSGTADAINLC--MTQVCQILLEVTRKKLSTENKATFKFQA 243
Query: 517 PP 518
PP
Sbjct: 244 PP 245
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 148 NSVPKPP-----ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERA 202
Query: 126 IEISDT 131
+ +S T
Sbjct: 203 VTLSGT 208
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 38/166 (22%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R+L + G +IGK G IK IR+ +GA IN+ + ERI+ I+ T +
Sbjct: 75 TIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKAF 132
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ +E + L+ + + + + R++V
Sbjct: 133 NMVCNKFEEDMLLLPNSVPKPP------------------------------ITMRVIVP 162
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS 241
G L+GKGG I+ +R T I++ LP HS R V++S
Sbjct: 163 ATQCGSLIGKGGSKIKDIREATGASIQVASEMLP--HSTERAVTLS 206
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI---IEISDTRRR 134
TTTY++ + K G +IGK+G I+ ++ ++GA I + D R+ +EI T
Sbjct: 186 TTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSEN 245
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
++A LI+ I E+D GG + G + +AT
Sbjct: 246 -----------IKKAEELINAVIAEADAGGSP------------SLIARGLTSS-HSIAT 281
Query: 195 ----RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
++ V VG ++G+GG+ I+ ++ + +I+++P++ LP E ++V GD
Sbjct: 282 AEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQN--LPEGDESKERTIRVTGD 339
Query: 251 INNVKNAVAIISSRLRES 268
++ A +I + ++
Sbjct: 340 KKQIEIATDMIKEVMNQT 357
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-----ADP--------VDGSDE 392
E ++M P KVG +IG++ + LQ G +++ ADP + G+ E
Sbjct: 185 ETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSE 244
Query: 393 QIITISSEEGPDDELFPA--QEALLHIQTRIVDLGADKDNIITT----RLLVPSSEIGCL 446
I +EL A EA ++ G + I T +L VP+ ++G +
Sbjct: 245 NIKKA-------EELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLI 297
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEV 499
GR G ++ ++ +GA IQ++ + +P + +++ G +I+ A D + EV
Sbjct: 298 IGRGGETIKSLQTRSGARIQLIP-QNLPEGDESKERTIRVTGDKKQIEIATDMIKEV 353
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDEL 407
VFR++ DKVG +IG ++ L + ++V + + +I+ IS+ E EL
Sbjct: 98 VFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAEL 157
Query: 408 FPAQEALLHIQTRIVD---------LGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMR 457
PA +A + I I D L + +LLVPS++ L G+ G + ++
Sbjct: 158 PPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQ 217
Query: 458 RSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+TGA ++I+ + E+ + + +V I G AL V LR +L
Sbjct: 218 ETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFL 267
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 174/433 (40%), Gaps = 86/433 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I + T PEG
Sbjct: 199 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST----PEG-- 252
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S + L ++H ++ + V + +
Sbjct: 253 -CSSACKMILEIMHKEAKDTKTA--------------------------DEVPLKTLAHN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T+T+I I +D +L E + V G I N A
Sbjct: 286 NFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITVKGAIENCCRAEQ 341
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + H P +N + +
Sbjct: 342 EIMKKVREAYENDVAAMSLQSH----------LTPGLN------------LAAVGLFPAS 379
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
P S GAAP S +Q E + ++ P VG +IG+ ++ L
Sbjct: 380 SSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASA 437
Query: 380 DLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLV 438
+K+A P S +++ I+ GP + F AQ + G ++ + T + V
Sbjct: 438 SIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRV 494
Query: 439 PSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE----LVQIVGEIQAA- 492
P+S G + G+ G +++E++ T A + ++ R++ P DE +V+I+G A+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQVIVKIIGHFYASQ 547
Query: 493 ------RDALVEV 499
RD L +V
Sbjct: 548 MAQRKIRDILAQV 560
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 145/348 (41%), Gaps = 48/348 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 44 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A L+ +LE G +G GG R+++S
Sbjct: 95 --PLQGTARAYALVAKGLLE----------------GAPQMGMGGVVSNNGTHPVRLLIS 136
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 137 HNQMGTIIGRSGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 191
Query: 260 IISSRLRESQHRDRSH--FHGRLHSPDRFFPDDDYVPHMNNTARRP---SMDGARFSGSN 314
I L + R ++ + + P + V N + RP + +GA FS
Sbjct: 192 EIGKCLIDDWQRGTGTILYNPAVRASVGTAPVNQNVG--NGYSSRPYNRTGNGADFSD-- 247
Query: 315 YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQ 374
+S YG R + + G +++ + +++ P D VG +IG + + ++
Sbjct: 248 -QSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISI----PADMVGCIIGRAGSKITEIR 302
Query: 375 NEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
G + +A P D + E++ TI S + + L+ E L +TR
Sbjct: 303 RSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAEKTR 350
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 271 DGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI---AKAPHDDTG-ERMFTI 326
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 327 MGSAQANEKAL 337
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ L+ + + V D S E+++TI + G
Sbjct: 75 GPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDST--SPERVLTIGANLGT- 131
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITT--RLLVPSSEIGCLEGRDG-SLSEMRRSTG 461
A E +L I ++ D K+N RLLV S+ GC+ GR G + E+R TG
Sbjct: 132 -----ALECVLDIIPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTG 186
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
A I++ S+ C T+ +V I G+ + D + + L++
Sbjct: 187 AQIKVYSQ----CCPESTERVVAIGGKPKIVVDCIETIHDLLQT 226
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEI 128
R+L H +AG +IG++G IK +R+ TGA I V+ + P ER++ I
Sbjct: 159 RLLVHQSQAGCIIGRAGFKIKELRERTGAQIKVYSQCCPESTERVVAI 206
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEA 149
AG +IGK G+ I+ IR+ + A I + E +PG +RII I+ T + Q A
Sbjct: 482 AGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHEQ-----------IQSA 530
Query: 150 LFLIHDR 156
FL+ R
Sbjct: 531 QFLLQSR 537
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 163 GGGFYGEEEEEYGGGG------GVGGGG--FRGGGNRVATRMVVSRMHVGCLLGKGGKII 214
GG Y + + +GG G GG G F GN +T++ + + G ++GKGG I
Sbjct: 434 GGDSYDDGYDNFGGMGQNFSQDNSGGMGQMFGNEGNLPSTQVTIPKDLAGAIIGKGGARI 493
Query: 215 EQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSR 264
+++R ++ QI I D LP ++ I+ + G +++A ++ SR
Sbjct: 494 QEIRRQSNAQIVI---DEGLP---GSNDRIITITGTHEQIQSAQFLLQSR 537
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 159/391 (40%), Gaps = 71/391 (18%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVT-----------TTYRILCHDMKAGGVIGKSGSII 101
M++ T ++ S N AN +P + VT T R + +AG +IGK+G +
Sbjct: 6 MHDATMVDESMNDANM-IDEPEIEVTPKTEEEYAQSMLTLRAIVSSKEAGIIIGKAGKNV 64
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD 161
+R TG V +++PG +R++ ++ P A+ A L+ +LE
Sbjct: 65 ADLRDETGVKAGVSKVVPGVHDRVLTVTG----------PLHGTAR-AYALVAKGLLE-- 111
Query: 162 GGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMET 221
G +G GG R+++S +G ++G+ G I+ ++
Sbjct: 112 --------------GAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLKIKH--IQD 155
Query: 222 KTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH 281
+ +R++ + LP+ +E IV+V G ++ AV I L + R L+
Sbjct: 156 ASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTI---LY 209
Query: 282 SP---DRFFPDDDYVPHMNNTARRP---SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP 335
+P N RP + +GA FS +S Y R S + +AG P
Sbjct: 210 NPAVRASVGSGSTNTNMGNGYGSRPYNRTGNGADFSD---QSGGYSSRRS--NSDAGRFP 264
Query: 336 M----SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGS 390
M D +Q + P D VG +IG + + ++ G + +A P D +
Sbjct: 265 MVAEDGDEIQ-------TQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDET 317
Query: 391 DEQIITISSEEGPDDE-LFPAQEALLHIQTR 420
E++ TI +++ L+ E L +TR
Sbjct: 318 GERMFTIMGSAAANEKALYLLYENLEAEKTR 348
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D D I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 269 DGDEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 324
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKETPP 518
+G A AL + L + R + + PP
Sbjct: 325 MGSAAANEKALYLLYENLEAEKTR---RSQQPP 354
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 70/407 (17%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
P + R+L G +IGK G+ I++I + T + I++H + G E+ I I T
Sbjct: 189 PKVQSDIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHST 248
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
PEG + + E I++ + + EE
Sbjct: 249 ----PEGCSKACTTIME--------IMQKEALDTKFTEE--------------------- 275
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGD 250
+ +++ VG L+GK G+ ++++ +T T+I I P +D +L E + V G
Sbjct: 276 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYN----PERTITVKGS 331
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
I A + ++RE+ D + + L S + +P +N A G
Sbjct: 332 IEACSRAEEEVMKKVREAYESDMAAMN--LQS--------NLIPGLNLNALGLFPSGTPG 381
Query: 311 SGSNYRSNNYGPRPS-GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGI 369
G + +N+ P + G G P S++V F P VG +IG+
Sbjct: 382 MGPSM--SNFPPSGAHGGCSSFGGQPESETVHLFI----------PALAVGAIIGKQGQH 429
Query: 370 VELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
++ L + G +K+A P +G D ++++ I GP + F AQ + G
Sbjct: 430 IKQLSHFAGASIKIA-PAEGMDAKQRMVIIV---GPPEAQFKAQCRIFGKLKEENFFGPK 485
Query: 428 KDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVP 473
++ + + VPS G + G+ G +++E++ T A + ++ R++ P
Sbjct: 486 EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTP 531
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 175/425 (41%), Gaps = 84/425 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IGK G IK+I + T + +++H + G E+ + I T PEG
Sbjct: 198 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT----PEG-- 251
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
EA +I + I++ + EE + +++
Sbjct: 252 -----TSEACRMILE-IMQKEADETKLAEE---------------------IPLKILAHN 284
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ ET T+I I +D S + E + V G + +A
Sbjct: 285 GLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS----IYNPERTITVKGTVEACASAEI 340
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I +LRE+ D + + + +P +N +A
Sbjct: 341 EIMKKLREAFENDMLAVNQQ----------ANLIPGLNLSA------------------- 371
Query: 320 YGPRPSGYSI-----EAGAAPMSDSVQPF-YGEDLVFRMLCPIDKVGRVIGESEGIVELL 373
G +G S+ AP + PF Y E + + P VG +IG+ ++ L
Sbjct: 372 LGIFSTGLSVLSPPAGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQL 431
Query: 374 QNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
G +K+A P +G D E+++ I+ GP + F AQ + ++
Sbjct: 432 ARFAGASIKIA-PAEGPDVSERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVK 487
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ + VPSS G + G+ G +++E++ T A + I+ R++ P + +V+I+G
Sbjct: 488 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFF 544
Query: 491 AARDA 495
A++ A
Sbjct: 545 ASQTA 549
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 140/353 (39%), Gaps = 54/353 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGKSG + +R TG V +++PG +R++ ++
Sbjct: 44 TLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ A L+ +LE G +G GG R+++S
Sbjct: 95 --PLNGTARAYALVAKGLLE----------------GAPQMGMGGIVSNNGTHPVRLLIS 136
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 137 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 191
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R L++P + T +M+ + +G N R N
Sbjct: 192 EIGKCLIDDWQRGTGTI---LYNP-------AVRASVGTTPSTSTMNQSVGNGYNSRPYN 241
Query: 320 YGPRPSGYSIEAGA------APMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGI 369
+ +S ++G S+ P ED + P D VG +IG
Sbjct: 242 RTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSK 301
Query: 370 VELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
+ ++ G + +A P D + E++ TI S + + L+ E L +TR
Sbjct: 302 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTR 354
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 275 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 330
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 331 MGSAQANEKAL 341
>gi|223973385|gb|ACN30880.1| unknown [Zea mays]
Length = 254
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
R R+VV G ++GKGG I+ E+ I+I P+D++ V + + +V V G
Sbjct: 33 RPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTVTGT 89
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMD 306
+N NA+ +I +L E H+ L SP + FP VP + P +
Sbjct: 90 FDNQMNAIDLILKKLSED-----VHYPANLSSPFPYAGLTFPSYPGVPVGYMIPQVPYNN 144
Query: 307 GARFSGSNYRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGE 365
NY NN YG R Y + PM E L + + +G V+G
Sbjct: 145 AV-----NYGPNNGYGGR---YQNNKPSTPMRSPASNEAQESLTIGIAD--EHIGAVVGR 194
Query: 366 S-EGIVELLQNEIGVDLKVADP---VDGSDEQIITIS 398
+ I E++Q G +K++D + G+ ++ +TI+
Sbjct: 195 AGRNITEIIQAS-GARIKISDRGDFISGTSDRKVTIT 230
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 43/350 (12%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R + +AG +IGK G + ++R TG V +++ G +R++ I+
Sbjct: 49 TLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTIT-------- 100
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
G + S A A + +LE G VG GG +++
Sbjct: 101 GGCDAVSKAYAA---VARSLLE----------------GAPSVGMGGVISANGTHPLKLL 141
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ A
Sbjct: 142 ISHNQMGTVIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERVVEVQGTPEGIERA 196
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS----GS 313
V I L + R L++P P N + S +R + G+
Sbjct: 197 VWEICKCLVDDWQRGTGTV---LYNPVVRGPGAPVSGGERNYPQERSYGSSRVTRTGNGA 253
Query: 314 NYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGESEGIVEL 372
++ SN+ G R ++ AA GE++ + + P D VG +IG + +
Sbjct: 254 DFSSNS-GGRAYNRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISE 312
Query: 373 LQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
++ + G + +A P D S E++ TI S + + L+ E L +TR
Sbjct: 313 IRKQSGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAEKTR 362
>gi|348578485|ref|XP_003475013.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Cavia
porcellus]
Length = 338
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQ-HTGAWINVHELIPGDEERIIEISDTRRRDPEGR- 139
R+L H AGG+IG G+ IK +R+ H G V E + + + D D GR
Sbjct: 148 RLLIHQSLAGGIIGVKGAKIKELREIHIG----VCECMNCNYSKYCTFRDLMAYDRRGRP 203
Query: 140 ------MPSFSPAQEALFLI-------HDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
M FS + I E GG G+ +Y GG G G
Sbjct: 204 GDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGY------DYSYAGGRGSYGDL 257
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
GG + T++ + + G ++GKGG+ I+Q+R E+ I+I D L + I+
Sbjct: 258 GG-PIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLE---GSEDRIIT 310
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDRSHF 276
+ G + ++NA ++ + ++ Q+ D F
Sbjct: 311 ITGTQDQIQNAQYLLQNSVK--QYADVEGF 338
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
+ TT + D+ AG +IGK G IK IR +GA I + E + G E+RII I+ T+
Sbjct: 261 IITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 315
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 67/338 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
R+VV G L+GKGG I+++R T Q+++ LP + +E + + G +
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITIAGIPQS 154
Query: 254 VKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGS 313
+ V I + E+ + SP P +P+ +PS F+G
Sbjct: 155 IIECVKQICVVMLETLSQ----------SP----PKGVTIPYR----PKPSSSPVIFAGG 196
Query: 314 NYRS--NNYG-PRPS-----GYSIEAGAAPMSDSVQPFYGE-----DLVFRMLCPIDKVG 360
+ Y P+P +++ PM+ F + P + +G
Sbjct: 197 QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIG 256
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
+IG + ++ G +K+A+PV+GS + +TI+
Sbjct: 257 CIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 294
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 43/250 (17%)
Query: 435 RLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAAR 493
++LV S G + GR GS + E+R TGA +++ SR T+ +V + GE++
Sbjct: 118 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSR----CAPQSTERIVLLNGEVEKII 173
Query: 494 DALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAA 553
D + + L KE P GP V P+ DP
Sbjct: 174 DCINIIIDVL----------KEIP--IKGP------VRPYDPM----------YYDPDII 205
Query: 554 THQSVQIPATSQPSKEA-------AGSVSETVKQNESERREDVPTVINRV-PLPLVTRST 605
+ +P + S+ GSV + +R + +I R P+P + T
Sbjct: 206 SDYGGYVPDRNFISRVGRGRDYGFGGSVIPSRYPGRDDRYSGMRDMIGRYSPIPAM--QT 263
Query: 606 LEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQS 665
+V +PD +I K + + R E SGA + + + G +II ISGT EQ++ AQ
Sbjct: 264 TQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISGTREQIQAAQY 323
Query: 666 VLQGFILSTQ 675
+LQ + +++
Sbjct: 324 LLQQCVRTSE 333
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 35/195 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPE--- 137
++L H+ AG VIG+ GS IK +R+ TGA + V P ERI+ ++ + +
Sbjct: 118 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCIN 177
Query: 138 ------GRMPSFSPAQEALFLIHDRILESDGGG-----GFYGE--EEEEYGGGGGVGGGG 184
+P P + + +D + SD GG F +YG GG V
Sbjct: 178 IIIDVLKEIPIKGPVRPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDYGFGGSVIPSR 237
Query: 185 FRGGGNRVA-----------------TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
+ G +R + T++ + G ++GKGG I ++R E+ QI +
Sbjct: 238 YPGRDDRYSGMRDMIGRYSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEV 297
Query: 228 LP-RDHSLPRCVSMS 241
P RD+ R +++S
Sbjct: 298 EPHRDNGGDRIITIS 312
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 17/233 (7%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINN 253
+++V H G ++G+GG I+++R +T Q+++ R C S E IV + G++
Sbjct: 118 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSR------CAPQSTERIVLLNGEVEK 171
Query: 254 VKNAVAIISSRLRESQHRDRSH-FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSG 312
+ + + II L+E + + + PD YVP N +R F G
Sbjct: 172 IIDCINIIIDVLKEIPIKGPVRPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDYGFGG 231
Query: 313 SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVEL 372
S S Y R YS G M P ++ P + G +IG+ +
Sbjct: 232 SVIPSR-YPGRDDRYS---GMRDMIGRYSPIPAMQTT-QVTIPDELGGAIIGKGGSRINR 286
Query: 373 LQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG 425
++ E G ++V D ++IITIS E A + LL R + G
Sbjct: 287 VREESGAQIEVEPHRDNGGDRIITISGTR----EQIQAAQYLLQQCVRTSEAG 335
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 144/356 (40%), Gaps = 59/356 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++ G+
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT--------GQ 97
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S + A ++ +LE G +G GG R+++S
Sbjct: 98 LRSLA---RAYAIVAKGLLE----------------GAPQMGMGGIVSNNGTHPIRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 139 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 193
Query: 260 IISSRLRESQHRD----------RSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR 309
I L + R R+ G + Y + N+ + +GA
Sbjct: 194 EIGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNSNPPAGNGYQNNANSRQYNRTGNGAD 253
Query: 310 FSGSNY--RSN-NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
FS +Y RSN + G R E G + ++ P D VG +IG
Sbjct: 254 FSDGSYNRRSNSDAGNRGYPQVTEDGEEIQTQNIS------------IPADMVGCIIGRG 301
Query: 367 EGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
+ ++ G + +A P D + E++ TI S + + L+ E L +TR
Sbjct: 302 GTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTR 357
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR G+ ++E+RRS+GA I I + P +G + + I
Sbjct: 278 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISI---AKAPHDETG-ERMFTI 333
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 334 MGSAQANEKAL 344
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 136/362 (37%), Gaps = 74/362 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ ++
Sbjct: 228 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 278
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S A L+ +LE G +G GG R+++S
Sbjct: 279 --ALSGTARAYALVAKGLLE----------------GAPQMGMGGIVSNNGTHPIRLLIS 320
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 321 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 375
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R + N A R S+ + S++
Sbjct: 376 EIGKCLIDDWQRGTGTI-------------------LYNPAVRSSVGSGSIQHNGGNSDS 416
Query: 320 YGPRPSGYSIEAGAAPMSDSV---------------QPFYGED----LVFRMLCPIDKVG 360
Y RP Y+ A SD P ED + P D VG
Sbjct: 417 YNSRP--YNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVG 474
Query: 361 RVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQ 418
+IG + ++ G + +A P D + E++ TI S + + L+ E L +
Sbjct: 475 CIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEK 534
Query: 419 TR 420
TR
Sbjct: 535 TR 536
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR G+ ++E+RRS+GA I I + P +G + + I
Sbjct: 457 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISI---AKAPHDETG-ERMFTI 512
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 513 MGSAQANEKAL 523
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 49/346 (14%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD--------PVDGSDEQIITISS 399
L R++ +VG +IG+ ++ + E G + ++D V GS E I+ S
Sbjct: 74 LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFS 133
Query: 400 ------EEGPDDELFPAQEALLHIQTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGR 449
EE P Q +Q +L ++ ++ +T RL+VP+S+ G L G+
Sbjct: 134 LIARKFEEMLSLLCLPVQTVGPTLQ----ELQSNGSHLPKPPVTLRLIVPASQCGSLIGK 189
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
GS + E+R TGA+IQ+ S E +P + T+ V + G +A + ++ +
Sbjct: 190 GGSKIKEIREVTGASIQVAS-EMLP---NSTERAVTVSGTAEAITKCIYQICCVMMESPP 245
Query: 509 RDFFQKETPPSSTGPT----GSALVVEAASPI---DITPAREVQTVTDPPAATHQSVQIP 561
+ P + P G A V+ I D+T ++ P H I
Sbjct: 246 KGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAI- 304
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
P AA + + ++ N + + +T E+ +P+ + +I K
Sbjct: 305 ---NPQALAALATTNNLRPNTAAAAIAT-----------ASTTTTEMTIPNDLIGCIIGK 350
Query: 622 SKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+ + ++SGA++ + + + + ISGTPE + AQ ++
Sbjct: 351 GGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLI 396
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERIIEI 128
PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER + +
Sbjct: 168 PKPP-----VTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTV 222
Query: 129 SDT 131
S T
Sbjct: 223 SGT 225
>gi|388502730|gb|AFK39431.1| unknown [Lotus japonicus]
Length = 123
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 598 LPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTP 657
L VT +T+E+V+ ++ + + + R ++SGASV++ + +Q + ISGTP
Sbjct: 44 LATVTNTTVEIVVSEHVFSSVYGEDGGNVDRIRQISGASVTVYDPSAGTSQGKVVISGTP 103
Query: 658 EQVERAQSVLQGFILSTQ 675
+Q AQS+LQ FI S Q
Sbjct: 104 DQTFAAQSLLQAFIQSGQ 121
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TTT +I K G +IGKSG I+ ++ ++GA I + D S TR +
Sbjct: 184 TTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPH-----SSTRPVELI 238
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
G + S A++ L++ I E+D GG + G V + +
Sbjct: 239 GTLESIDKAEK---LMNAVIAEADAGGSP------------ALVARGLSPAQAIVGSDQI 283
Query: 198 ---VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
V VG ++GKGG+ I+ ++ +T +I+++P+ LP E VQV GD +
Sbjct: 284 QIQVPNEKVGLIIGKGGETIKSLQTKTGARIQLIPQH--LPEGDDSKERTVQVTGDKRQI 341
Query: 255 KNAVAIISSRLRE 267
+ A +I L +
Sbjct: 342 EIAQEMIKEVLSQ 354
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 341 QPFYGEDLVFRML-CPIDKVGRVIGESEGIVELLQNEIGVDLKV-----ADPVDGSDEQI 394
QP G D R + P +KVG +IG+S + LQ G +++ ADP S +
Sbjct: 177 QPISGSDTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADP-HSSTRPV 235
Query: 395 ITISSEEGPD--DELFPA--QEALLHIQTRIVDLGADKDNIIT----TRLLVPSSEIGCL 446
I + E D ++L A EA +V G I ++ VP+ ++G +
Sbjct: 236 ELIGTLESIDKAEKLMNAVIAEADAGGSPALVARGLSPAQAIVGSDQIQIQVPNEKVGLI 295
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTTR 502
G+ G ++ ++ TGA IQ++ + +P + VQ+ G +I+ A++ + EV ++
Sbjct: 296 IGKGGETIKSLQTKTGARIQLIP-QHLPEGDDSKERTVQVTGDKRQIEIAQEMIKEVLSQ 354
Query: 503 L 503
+
Sbjct: 355 I 355
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 412 EALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSRE 470
EA+L +Q + + ++K I TRLLVPSS++GC+ G+ ++EMRR A I++ +
Sbjct: 65 EAILQLQNKTSEF-SEKGMI--TRLLVPSSKVGCILGQGSQDINEMRR-LQAEIRVYPKN 120
Query: 471 EVPACVSGTDELVQ 484
E P C S +ELVQ
Sbjct: 121 EKPKCASEDEELVQ 134
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
TR++V VGC+LG+G + I +MR + +IR+ P++ P+C S EE+VQ
Sbjct: 84 TRLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYPKNEK-PKCASEDEELVQA 135
>gi|388855866|emb|CCF50441.1| related to poly(rC)-binding protein 3 [Ustilago hordei]
Length = 440
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
+++NN ++ DP T R L +AG +IGK G+ + +R+ TG V +++P
Sbjct: 26 DDANNNLSAAELDPD--ATLLVRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKVVP 83
Query: 120 GDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGG 179
G +R++ ++ T +A LI ILE+ +
Sbjct: 84 GVHDRVLSVTGT-----------LVGISDAFALIAKTILENPLNAPVQAD---------- 122
Query: 180 VGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS 239
G + + R+++S +G ++G+ G I+ ++ + R++ LP+
Sbjct: 123 --GTPAQAAAQTSSVRLLISHNLMGTVIGRQGLKIKH--IQDLSGARMVASKEMLPQS-- 176
Query: 240 MSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRS---HFHGRLHSP 283
+E +V+V G ++ ++ AV I+ L E R ++ + G+ H P
Sbjct: 177 -TERVVEVQGSVDAIRVAVHQIARCLAEDCDRSQNVVLYQPGQGHGP 222
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 43/224 (19%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
+ TT I + K G +IGK+G I++++ +GA I + + + + + TR
Sbjct: 147 ALQETTRLIDVPNTKVGVLIGKAGETIRNLQMSSGAKIQITK-----DADVSSDAMTRPV 201
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGGGFRG 187
+ G + S A++ LI I E++ GG GF G G G F
Sbjct: 202 ELVGTVESIDKAEQ---LIKSVIAEAEAGGSPALIAKGF---------GSGQSGSEQFE- 248
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQV 247
M+V VG ++GKGG+ I+ ++ + +I+++P+ P +++E V+V
Sbjct: 249 --------MLVPDNKVGLIIGKGGETIKNLQTRSGARIQLIPQH--PPAGTTLTERTVRV 298
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRS--------HFHGRLHSP 283
G+ ++ A +I + ++ R+ + H H + H P
Sbjct: 299 TGNKKQIEAAKELIKQAMSQTFPRNTTQSGGYGPQHHHPQGHGP 342
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERI+ I+
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GNCPERIVTITG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A+F I Y EE+ N A
Sbjct: 64 ------------PTDAIFKAFAMIA--------YKFEEDI-----------INSMSNSPA 92
Query: 194 T-------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS- 241
T R+VV G L+GKGG I+++R T Q+++ LP +S R V++S
Sbjct: 93 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP--NSTERAVTISG 150
Query: 242 --EEIVQVVGDINNV 254
+ I+Q V I V
Sbjct: 151 TPDAIIQCVKQICVV 165
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 88 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 140
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 141 STERAVTISGT 151
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 159/392 (40%), Gaps = 63/392 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L G +IG+ GS I+ I Q + A ++VH D +E + T +PE
Sbjct: 68 RVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHR---KDNVGSVEKAITIYGNPEN--- 121
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ +ILE +E G + +++
Sbjct: 122 --------CTMACKKILE------VMQQEANSTNKG-------------EICLKILAHNN 154
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GK G I+++ +T T+I + S+ S + E I+ V G I N+ +
Sbjct: 155 LIGRIIGKSGNTIKRIMQDTDTKITV----SSINDISSFNLERIITVKGSIENMSKGESQ 210
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNY 320
IS++LR+S D L FP + M+ +G F+G R+
Sbjct: 211 ISAKLRQSYENDLQA----LAPQTIMFPGLHPMAMMSTAG-----NGMGFTG---RTAGA 258
Query: 321 GPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVD 380
SG S G P S+ P ++ + + P + VG +IG + + G
Sbjct: 259 TASASG-SGATGMYPGSNF--PIEVQETTY-LYIPNNAVGAIIGTKGLHIRNIIRFSGAS 314
Query: 381 LKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTR 435
+K+A P + E+ +TI G + + AQ + + D +T
Sbjct: 315 VKIAPLEADKPQEQQTERKVTII---GTPEAQWKAQYLIFEKMREEGFVSGTDDVRLTVE 371
Query: 436 LLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
+ VPS+++G + G+ G ++ E++R TG+ I++
Sbjct: 372 IFVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 403
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 66 ANSNPKDPSLMVT-------------TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+NS P PS V+ T+ RI K G VIGK G IK+I+ +GA I
Sbjct: 60 SNSIPAPPSYTVSYASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKI 119
Query: 113 NV---HELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGE 169
+ + P R +E+ T + S A+E LI+D I E+D GG
Sbjct: 120 QITKDQDADPHSLTRDVELMGTSEQ--------ISRAEE---LINDVIAETDAGGSASSA 168
Query: 170 EEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP 229
G + G + + R V VG L+GKGG+ I+ M+ + +++I+P
Sbjct: 169 VH---------GLNTKQPGAEQFSIR--VPNDKVGLLIGKGGETIKYMQSRSGARMQIIP 217
Query: 230 RDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
LP +E V + G ++ A +++ L
Sbjct: 218 LH--LPPGDPTTERTVYINGLTEQIEAAKELVNDVL 251
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN 66
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+A +I D+ LE D V
Sbjct: 67 A-----------IFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 149/378 (39%), Gaps = 97/378 (25%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-----------LIPGDEERIIEISD 130
R+L H AG +IG G+ IK +R++T I + + L+ G ER++E
Sbjct: 124 RLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKMERVVECIK 183
Query: 131 TRRR-----DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF 185
T +GR + P +D E GGF EE GG +GG
Sbjct: 184 TMLELIADAPIKGRAQPYDPN------FYDETYEY---GGFTVMFEERVGGRRPMGGFPS 234
Query: 186 RG----GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS 241
RG GG+R RM SR G G + R + R P HS
Sbjct: 235 RGNRSSGGDRGFERMSSSR-------GGRGPMSSSRRDYDDSPRRGPPPPHS-------- 279
Query: 242 EEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH--SPDRFFPDDDYV---PHM 296
SR+ R R+ G H DR++ D Y
Sbjct: 280 ---------------------SRVSRGNSRGRNMSIGHSHRGGDDRYY--DSYRGSDERS 316
Query: 297 NNTARRP-----SMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
N+ RP SM G +GS++ + + G R S I P+ + +
Sbjct: 317 NDRRGRPDRYSDSMSGGYDNGSSWDNYHSGGRCSYNDI---GGPV-----------VTTQ 362
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
+ P D G +IG+ ++ ++++ G +K+ +P++GS+++IITI+ G D++ Q
Sbjct: 363 VTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITIT---GTQDQI---Q 416
Query: 412 EALLHIQTRIVDLGADKD 429
A +Q+ ++ L KD
Sbjct: 417 NAQFLLQSSVLHLLGHKD 434
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+N +S +N ++ + D V TT + D+ AG +IGK G IK IR +GA I
Sbjct: 335 DNGSSWDNYHSGGRCSYNDIGGPVVTTQVTIPKDL-AGSIIGKGGQRIKQIRHDSGAAIK 393
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRIL 158
+ E + G E+RII I+ T+ + Q A FL+ +L
Sbjct: 394 IDEPLEGSEDRIITITGTQDQ-----------IQNAQFLLQSSVL 427
>gi|449669385|ref|XP_002157937.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Hydra magnipapillata]
Length = 549
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 173/436 (39%), Gaps = 77/436 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI------PGDEERIIEISDTRRRD 135
RIL ++GK G I +++ +TG I++H P DE + T + D
Sbjct: 141 RILVPSDMVKVLLGKGGCTITAMQTNTGTKIDIHRDKGPCYRGPCDETIV-----TIKGD 195
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VA 193
PE SFS A + F E E+ R R +
Sbjct: 196 PE----SFSKAIREIL------------SAFSNEYEK-------------RDTDARKPIQ 226
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD------HSLPR-CVSMSEEIVQ 246
+++ + G ++GKGG ++Q + E+ I+ +P V E ++
Sbjct: 227 LKLLAHDLLCGRIIGKGGNNLKQTKQESNVSKLIISNSIYEESSQMIPTGFVCTGERVIT 286
Query: 247 VVGDINNVKNAVAIISSRLRESQHRD-RSHFHGR--LHSPDRFFPDDDYVPHMNNTARRP 303
+ G ++ + A ++IS +LRE +D R+ ++ L+ F +Y P
Sbjct: 287 IEGSLDAICIAESLISKKLREYMEKDARNQYNTNMGLYHGAAFGGQINY-------GYNP 339
Query: 304 SMDGARFSGSNYRSNNYGPRPSGYS-----IEAGAAPMSDSVQ-PFYG--EDLVFRMLCP 355
M + G + Y PS + + G P + Q P+Y E +L P
Sbjct: 340 QMYPRMYGGYTVDTFGYPAYPSSMNNYPGILGHGYLPYTPPQQVPYYSNFEPETTCILIP 399
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
+VG +IG + G + ++ G ++V +G + ++ + GP D + A +
Sbjct: 400 TKEVGAIIGRNGGYISRMKQYSGAQIRVIKGDEGGESKVEIV----GPPDCQWRASLCVF 455
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREE--- 471
+ + A + + T +VP S +G + G+ G + +++ A+I++ ++
Sbjct: 456 SKIKETMKV-AYSEAQLKTEFIVPGSCVGRVIGKKGQVVQDIQDKAQADIEVPKDKQGAN 514
Query: 472 -VPACVSGTDELVQIV 486
VP ++GT QI
Sbjct: 515 DVPVYITGTFNGTQIA 530
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 35/328 (10%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ +++ VG L+GKGG + ++ E+ T++ I + + E + + G +
Sbjct: 310 IPLKLLAHNSLVGRLIGKGGTTLNKIMEESNTKVSI---SNLQELTIYNMERTITIKGSL 366
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
N+ A ++S +LR+S D + + + FP ++ + P GA F+
Sbjct: 367 NDECKAEEMVSEKLRDSFRADMASLTQQYN----LFPGLNHASVFSGLGNSP---GAIFN 419
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+ + S Y+I AA ++ + + PI VG +IG +
Sbjct: 420 VAMHNS------AVLYAIFGPAAYTVNTHHLLQPPSEITYLFIPISAVGAIIGVKGQEIR 473
Query: 372 LLQNEIGVDLKVADPVDGSDEQ-IITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
+ + ++V P DE+ + I EG D + AQ + H + D+ + K
Sbjct: 474 EISQKSSAKVRVEPPRSEDDEERAVYI---EGYPDAQWIAQWFIYH--KILTDVCSGKGE 528
Query: 431 I-ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDE---LVQI 485
+ + + ++VP++ +G + G+ GS + ++ TGA I +VP + D+ +V+I
Sbjct: 529 VRLISEIMVPANMVGRIIGKRGSAIQDLELLTGAEI------DVPKNIKPNDKNEVVVRI 582
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQ 513
G A++ A ++ R Y + Q
Sbjct: 583 KGHFFASQSAQRQI--RFMLYTAKAMMQ 608
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
G+ + ++V+ +GCL+GKGG II +MR T++ IRIL +++ LP+ S +E+VQ
Sbjct: 27 GHSMGKAVIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKEN-LPKIASDDDEMVQ 83
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 436 LLVPSSEIGCLEGRDGSL-SEMRRSTGANIQILSREEVPACVSGTDELVQ 484
++V ++ IGCL G+ GS+ +EMRR T +NI+ILS+E +P S DE+VQ
Sbjct: 34 VIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMVQ 83
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPEGRMPSFSP 145
+ G +IGK G IK ++ +GA I V + P RI+E+ T +
Sbjct: 147 RVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQ----------- 195
Query: 146 AQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGC 205
+A LI+D + E+D GG G Y G +GG + M + VG
Sbjct: 196 IAKAEQLINDVLAEADAGGS--GTISRRYAG---------QGGSEHFS--MKIPNNKVGL 242
Query: 206 LLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
++GKGG I+ M+ + +I+++P LP + +E V + G V+ A ++
Sbjct: 243 VIGKGGDSIKNMQARSGARIQVIPLH--LPPGDTSTERTVHIEGTSEQVEAAKQLV 296
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G L ++ P +VG +IG+ ++ LQ + G ++V +D I G
Sbjct: 134 GSGLSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTP 193
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTR-----------LLVPSSEIGCLEGRDG-S 452
+++ A++ + + + + A I+ R + +P++++G + G+ G S
Sbjct: 194 EQIAKAEQLINDV---LAEADAGGSGTISRRYAGQGGSEHFSMKIPNNKVGLVIGKGGDS 250
Query: 453 LSEMRRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTT 501
+ M+ +GA IQ++ P S T+ V I G +++AA+ + EVT+
Sbjct: 251 IKNMQARSGARIQVIPLHLPPGDTS-TERTVHIEGTSEQVEAAKQLVNEVTS 301
>gi|294460460|gb|ADE75808.1| unknown [Picea sitchensis]
Length = 131
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 611 PDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGF 670
P+ + + ++ LT+ ++SGA V + + +P T+ ++ ISGTPEQ AQS+LQ F
Sbjct: 64 PERVIGSIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPEQTHAAQSLLQAF 123
Query: 671 ILSTQDA 677
I+S Q +
Sbjct: 124 IMSGQSS 130
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 77
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 78 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 137
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 138 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 179
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 19 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT- 74
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 75 ----------NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 108
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 109 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 92 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 146
Query: 118 IPGDEERIIEIS 129
+P ER I I+
Sbjct: 147 LPNSTERAITIA 158
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 330 EAGAAPMSDSVQP------FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
EA A M+ S P + D R+L P G +IG+ + L+++ + V
Sbjct: 37 EADAGTMTGSGGPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV 96
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEI 443
D E+++TISS+ ++ E + +++ G+D+ I R+LV S+
Sbjct: 97 PDCP--GPERVLTISSDLPTVLQVL--NEVVPNLEENGSRHGSDE---IDVRMLVHQSQA 149
Query: 444 GCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
GC+ G+ G + E+R TGA I+I S C TD L+ I G+ + + E+
Sbjct: 150 GCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCIECIRELIAT 205
Query: 503 LRS 505
+++
Sbjct: 206 IKT 208
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 45/189 (23%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L AG +IGK G I +R A I V + PG ER++ IS +P
Sbjct: 64 RLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDC-PG-PERVLTISSD--------LP 113
Query: 142 SFSPAQEALFLIHDRI--LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ L ++++ + LE +G R G + + RM+V
Sbjct: 114 TV------LQVLNEVVPNLEENGS----------------------RHGSDEIDVRMLVH 145
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ GC++GKGG I+++R +T +I+I H P ++ ++ + G N +
Sbjct: 146 QSQAGCIIGKGGLKIKELREKTGARIKIY--SHCCPHS---TDRLISICGKPNTCIECIR 200
Query: 260 IISSRLRES 268
+ + ++ S
Sbjct: 201 ELIATIKTS 209
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 432 ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
+ RLLV SS +G L GR G+ + + +GA ++IL + E+PAC DE+V++VG +
Sbjct: 197 VEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSCE 256
Query: 491 AARDALVEVTTRLRSYLYR 509
AA AL + +++++++ R
Sbjct: 257 AACAALRLLASQIKAHVLR 275
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 60 NNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP 119
N +++ P+ P+L + R+LC +IGK G +K IR+ +GA ++V + +
Sbjct: 16 NGMMGLSDTEPEVPALRL----RLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVL 71
Query: 120 GDEERIIEISDTRRRDP 136
G +ER++ I R+ P
Sbjct: 72 GCDERVVHIMGERQAQP 88
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER 124
V T+R+L + G +IGK G ++ +R TGA I V + PG EER
Sbjct: 340 VEVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER 387
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE 400
L R+LCP V +IG+ V+ ++ E G L VADPV G DE+++ I E
Sbjct: 31 LRLRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVVHIMGE 83
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 31/334 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ IV+ + E G + ++D E+I+TI+ G D +
Sbjct: 18 LTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISD--GSCPERIVTIT---GTTDAI 72
Query: 408 FPAQEALLHIQTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
F A + V I IT RL++P+S+ G L G+ GS + E+R TGA
Sbjct: 73 FKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSKIKEIREITGA 132
Query: 463 NIQILSREEVP------ACVSGT-DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
++ +++ E +P VSGT D + Q + I ++E + + YR Q
Sbjct: 133 SV-VVASEMLPNSTERAVTVSGTSDAITQCIYHICC---VMLESPPKGATIPYRPKPQVG 188
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
P G G A ++ + TP ++ ++ P A ++ + + + + S
Sbjct: 189 GPVILAG--GQAYTIQGNYAVPATP--DMNKLSGNPLANLAALGLGGLTGTGGGGSMNAS 244
Query: 576 ETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
S+ R + P + + E+ +P+ + +I K T + ++SGA
Sbjct: 245 ALAALAGSQLR----SGGGGGPQSGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGA 300
Query: 636 SVSL--VEGQPEGTQKIIQISGTPEQVERAQSVL 667
+ + E + +++ I I+GT E V AQ ++
Sbjct: 301 MIRISNCEDRESSSERTITITGTAESVALAQYLI 334
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
VT T R+L + G +IGK G I+K R+ +GA IN+ + ERI+ I+ T
Sbjct: 16 VTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISD--GSCPERIVTITGT----- 68
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+A+F + I + + EEE GG + G + R+
Sbjct: 69 ----------TDAIFKAFNLICK---------KLEEEV--GGPLAGTAIP--RPPITLRL 105
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
++ G L+GKGG I+++R T + + LP + +E V V G + +
Sbjct: 106 IMPASQCGSLIGKGGSKIKEIREITGASVVV--ASEMLP---NSTERAVTVSGTSDAITQ 160
Query: 257 AVAIISSRLRES 268
+ I + ES
Sbjct: 161 CIYHICCVMLES 172
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDP 136
T I+ KAG VIGK G IKS+++ G + + + P + ++ + IS +
Sbjct: 173 TVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK-- 230
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
Q+A ++ + I + GF E+ EYG R GG+ + +
Sbjct: 231 ---------VQQAKEMVMELIRDQ----GFR-EQRGEYGS---------RIGGDSL--DV 265
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
V R VG ++G+ G++I++++ +T +I+ P D + P + I Q++G + ++
Sbjct: 266 PVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTP------DRIAQIMGPPDQAQH 319
Query: 257 AVAIISSRLRESQ 269
A IIS LR Q
Sbjct: 320 AAEIISDLLRSVQ 332
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A +Q+ + + +P + T+ + I G Q+ + + ++ + L + + T P
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 522 GPTGSALV 529
P+ S ++
Sbjct: 185 KPSSSPVI 192
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 66 ----------NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 179/431 (41%), Gaps = 48/431 (11%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP-GDEERIIEISDTRRRDPEGRM 140
RIL G +IG+ G+ I+SI Q T A ++VH G E+ I I T P+
Sbjct: 141 RILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESLGSAEKAITILGT----PDS-- 194
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S A + ++ +L ++ E+ + +++
Sbjct: 195 -CTSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPN---------------IPLKILAHN 238
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVS-MSEEIVQVVGDINNVKNAVA 259
+G L+GK G +I+ + +T ++I I L S SE + V+G + N A A
Sbjct: 239 NLIGRLIGKNGNVIKSIMNQTNSKITI----SKLEDLKSGYSERTITVIGTVENSSRAEA 294
Query: 260 IISSRLRESQHRDRSHF--HGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
++S++LR +D + + S + P N+T S G+ +
Sbjct: 295 LLSAKLRSYYKQDMASMIPQRQGQSSANSNSNGSSYPLSNSTTSSVSDSGSLIDSAAISP 354
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
+ PSG +D+VQ E + PI VIG + L+
Sbjct: 355 LSIPNSPSGLFSNNSVFLENDNVQS--DEIETTAIYIPIQTFNYVIGARGNQLPALEQIS 412
Query: 378 GVDLKVADPV-DGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-LGADKDNIITTR 435
G L++ + G++E+ + ++ G + AQ L I ++ + L ++ + T
Sbjct: 413 GASLQLVQSMYSGANERKVVVN---GNASSQWKAQ---LSIFNKVGEGLTPSEELSLRTE 466
Query: 436 LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDEL-VQIVGEIQAAR 493
+LVPS +G + G+ GS + +++ TGA I E+P ++ D++ V I G A++
Sbjct: 467 ILVPSPLVGRIIGKGGSTVRQLQSQTGAMI------EIPRGMADGDKVSVHIKGTFLASQ 520
Query: 494 DALVEVTTRLR 504
A + + +R
Sbjct: 521 AAQRRIRSIIR 531
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 23/171 (13%)
Query: 348 LVF-RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG----SDEQIITIS-SEE 401
L F +ML G VIG++ I+ ++N+ G LK++ P + + E+++ + +E
Sbjct: 17 LCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLS-PTNSYFPNTQERVLVLCGKQE 75
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSE 455
++ L + + I T+ DK N+ T R++VP S + + G+ G + +
Sbjct: 76 QINNALLIILDKIRQITTQNFQ---DKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQ 132
Query: 456 MRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRS 505
++ +TGA IQI SRE+ G +E ++ I+G ++ D ++VT +++
Sbjct: 133 LQDTTGAKIQISSRED------GLNERIISIIGPFESISDTAIKVTNSIQN 177
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDP 136
T I+ KAG VIGK G IKS+++ G + + + P + ++ + IS +
Sbjct: 184 TVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK-- 241
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
Q+A ++ + I E GF E+ EYG R GG + +
Sbjct: 242 ---------VQQAKEMVMELIREQ----GFR-EQRGEYGS---------RIGGESL--DV 276
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
V R VG ++G+ G++I++++ +T +I+ P D S P + I Q++G + ++
Sbjct: 277 PVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSAP------DRIAQIMGPPDQAQH 330
Query: 257 AVAIISSRLRESQ 269
A II+ LR Q
Sbjct: 331 AADIIADLLRSVQ 343
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + ++D S E+I+TI+ G + +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISD--GSSPERIVTIT---GASEVI 71
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A + I +++ +T RL+ P+S+ G L G+ GS + E+R STG
Sbjct: 72 FKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEIRESTG 131
Query: 462 ANIQI 466
A +Q+
Sbjct: 132 AQVQV 136
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 52/194 (26%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ + ERI+ I+
Sbjct: 13 LNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISD--GSSPERIVTITG---- 66
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
A E +F I E + EE+ N T
Sbjct: 67 -----------ASEVIFKAFAMIAE---------KFEEDI----------LASMINSTVT 96
Query: 195 -------RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS-- 241
R+V G L+GKGG I+++R T Q+++ LP S R V++S
Sbjct: 97 SRPPVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDLLP--DSTERAVTISGT 154
Query: 242 -EEIVQVVGDINNV 254
I Q V I V
Sbjct: 155 PHAITQCVKHICTV 168
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D V+R++ P+ KVG +IG +++ + E +++ D ++I+ IS +E
Sbjct: 21 PGWPGDNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKE 80
Query: 402 GPDDELFPAQEALLHIQTRIVDLGADKDNII----------TTRLLVPSSEIGCLEGRDG 451
P+ L PA +A+L + R+ A + + + RLLV SS+ L G+ G
Sbjct: 81 EPEAALSPAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQG 140
Query: 452 ----SLSEMRRSTGANIQIL 467
S+ E RR ++ I
Sbjct: 141 STIKSILESRRCASSSCYIF 160
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 71 KDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
K P YR++ K G +IG+ G +IK + T A I + + P +RI+ IS
Sbjct: 19 KWPGWPGDNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISG 78
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
+ +PE + SPA +A+ + R+ G E G V G F
Sbjct: 79 --KEEPEA---ALSPAIDAVLRVFKRVSGPSAG--------EGDATGSAVAGAAFS---- 121
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQM 217
+ R++V+ L+GK G I+ +
Sbjct: 122 --SVRLLVASSQAINLIGKQGSTIKSI 146
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 330 EAGAAPMSDSVQP------FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
EA A M+ S P + D R+L P G +IG+ + L+++ + V
Sbjct: 51 EADAGTMTGSGGPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV 110
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEI 443
D E+++TISS+ ++ E + +++ G+D+ I R+LV S+
Sbjct: 111 PDCP--GPERVLTISSDLPTVLQVL--NEVVPNLEENGSRHGSDE---IDVRMLVHQSQA 163
Query: 444 GCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
GC+ G+ G + E+R TGA I+I S C TD L+ I G+ + + E+
Sbjct: 164 GCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCIECIRELIAT 219
Query: 503 LRS 505
+++
Sbjct: 220 IKT 222
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 45/189 (23%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L AG +IGK G I +R A I V + PG ER++ IS +P
Sbjct: 78 RLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDC-PG-PERVLTISSD--------LP 127
Query: 142 SFSPAQEALFLIHDRI--LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ L ++++ + LE +G R G + + RM+V
Sbjct: 128 TV------LQVLNEVVPNLEENGS----------------------RHGSDEIDVRMLVH 159
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ GC++GKGG I+++R +T +I+I H P ++ ++ + G N +
Sbjct: 160 QSQAGCIIGKGGLKIKELREKTGARIKIY--SHCCPH---STDRLISICGKPNTCIECIR 214
Query: 260 IISSRLRES 268
+ + ++ S
Sbjct: 215 ELIATIKTS 223
>gi|391326103|ref|XP_003737564.1| PREDICTED: RNA-binding protein Nova-1-like [Metaseiulus
occidentalis]
Length = 430
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 61 NSNNRANSNPKDPSLMVTTT-YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HE 116
N + A S P L T ++IL + AG +IGK G I +++ GA + + ++
Sbjct: 6 NVASTAASAGGSPGLTAPTYHFKILVPAVAAGAIIGKGGETIAQVQKDCGARVKMSKSND 65
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
PG ER+ I+ T E + IH+ I++ +E+ +
Sbjct: 66 FYPGTTERVCLITGTV---------------EGIVKIHNFIMDKI-------KEKPDPNS 103
Query: 177 GGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI--LPRDHSL 234
GV + +++V G ++GKGG I+Q++ ++ I++ RDH+L
Sbjct: 104 RTGVDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEDSNVYIQLSQKSRDHAL 163
Query: 235 PRCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+E + ++G++ + AV ++ +++ E
Sbjct: 164 ------AERSITIIGELEPTRKAVDLVLAKIVE 190
>gi|459269|emb|CAA54960.1| transcribed sequence 1087 [Zea mays]
Length = 228
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
R R VV G ++GKGG I+ E+ I+I P+D++ V + + +V + G
Sbjct: 8 RPKVRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNY---VGLHDRLVTITGT 64
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVPHMNNTARRPSMD 306
+N NA+ +I +L E H+ L SP + FP VP + P +
Sbjct: 65 FDNQMNAIDLILKKLSED-----VHYPPNLSSPFPYAGLTFPSYPGVPVGYMIPQVPYSN 119
Query: 307 GARFSGSNYRSNN-YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGE 365
NY NN YG R Y PM E L + + +G V+G
Sbjct: 120 AV-----NYGPNNGYGGR---YQNNKPTTPMRSPASNEAQESLTIGIAD--EHIGAVVGR 169
Query: 366 S-EGIVELLQNEIGVDLKVA---DPVDGSDEQIITIS 398
+ I E++Q G +K++ D + G+ ++ +TI+
Sbjct: 170 AGRNITEIIQAS-GARIKISDRGDYISGTSDRKVTIT 205
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG---- 63
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 64 ------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVTL 100
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 26/197 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK+G I+ I+ +GA I V HE PG R +E+S
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELS------ 192
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G+ S A++ LI + + E+D G G +Y + G +
Sbjct: 193 --GKPEQISKAEQ---LIKEVLAEADAGSSGAGSGGRKYNA--------TQPGAETF--Q 237
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M ++ VG ++GKGG+ I+ M+ + +I+++P LP + +E V + G ++
Sbjct: 238 MKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLH--LPAGDTSTERTVHIDGTQEQIE 295
Query: 256 NAVAIISSRLRESQHRD 272
A +IS E++ R+
Sbjct: 296 AAKQLISEVTSENRARN 312
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 330 EAGAAPMSDSVQP------FYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV 383
EA A M+ S P + D R+L P G +IG+ + L+++ + V
Sbjct: 58 EADAGAMTGSGGPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV 117
Query: 384 ADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEI 443
D E+++TISS+ ++ E + +++ G+D+ I R+LV S+
Sbjct: 118 PDCP--GPERVLTISSDLPTVLQVL--NEVVPNLEENGSRHGSDE---IDVRMLVHQSQA 170
Query: 444 GCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTR 502
GC+ G+ G + E+R TGA I+I S C TD L+ I G+ + + E+
Sbjct: 171 GCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPTTCIECIRELIAT 226
Query: 503 LRS 505
+++
Sbjct: 227 IKT 229
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 42/164 (25%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L AG +IGK G I +R A I V + PG ER++ IS +P
Sbjct: 85 RLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDC-PG-PERVLTISSD--------LP 134
Query: 142 SFSPAQEALFLIHDRI--LESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ L ++++ + LE +G R G + + RM+V
Sbjct: 135 TV------LQVLNEVVPNLEENGS----------------------RHGSDEIDVRMLVH 166
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPR--DHSLPRCVSMS 241
+ GC++GKGG I+++R +T +I+I HS R +S+
Sbjct: 167 QSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISIC 210
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRD 135
T+ I + + G +IGKSG IK+++ +GA I V + +PG + R +E+S T +
Sbjct: 118 TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQ- 176
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGG--GGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A LI++ + E+D G +Y + G ++
Sbjct: 177 ----------ISRAEQLINEVLAEADAASSGNL---SSRKYNA--------PQPGADQF- 214
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+M ++ VG ++GKGG+ I+ M+ ++ +I+++P LP +E V + G
Sbjct: 215 -QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLH--LPPGDPATERTVYIDGTQEQ 271
Query: 254 VKNAVAIISSRLRESQHRD--RSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
++ A ++ E++ R+ + + + P R P ++ PH ++P
Sbjct: 272 IETAKQLVIEVTSENRARNPMSGGYSQQGYRPPR--PQSNWGPHGGAPMQQP 321
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 41 HRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSI 100
HRG+ ++ + +N+++ N+ + T +L G VIGK G +
Sbjct: 275 HRGSRGSDRSGNYSNDSNFNHGSG------------TTDGVEVLVPRAAVGVVIGKGGDM 322
Query: 101 IKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI 157
IK I+ TGA + E PGD + I+ G+ + ++ + + D +
Sbjct: 323 IKKIQAETGARVQFQQGREDGPGDRKCIV----------SGKHQAVEQVRQRIQELIDSV 372
Query: 158 LESDGGGGFYGEEEEEYGGG-------GGVGGGGFRGGG---NRVATRMVVSRMHVGCLL 207
+ D G G G G GG R GG +++ T V G ++
Sbjct: 373 MRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQGGPMQDKIETTFTVPSSKCGIII 432
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
GKGG+ I+Q+ +T + R+ S + +E+I + G+ V++A I S +L
Sbjct: 433 GKGGETIKQINQQTGAHCELDRRNQS-----NENEKIFIIRGNPEQVEHAKRIFSEKL 485
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEIS-DTRRRDPEGRM 140
I+ K G +IGK G IK +++ +GA + V + P E E+ + I+ D ++ + ++
Sbjct: 202 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 261
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A++ + + H SD G + + +G G G ++V R
Sbjct: 262 VYELIAEKEMQMFHRGSRGSDRSGNYSNDSNFNHGSGTTDG------------VEVLVPR 309
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRI 227
VG ++GKGG +I++++ ET +++
Sbjct: 310 AAVGVVIGKGGDMIKKIQAETGARVQF 336
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEG 138
+I + + G +IGK G IK ++ +GA I V + P R++E+ T +
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQ---- 193
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+A LI+D + E++ GG G+ G M +
Sbjct: 194 -------IAKAEQLINDVLSEAESGGS-------------GIVSRRLTGPSGSEQFVMKI 233
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VG ++GKGG+ I+ M+ T +I+++P LP + +E +Q+ G +++A
Sbjct: 234 PNNKVGLVIGKGGETIKSMQARTGARIQVIPLH--LPPGDTSTERTLQIDGSSEQIESAK 291
Query: 259 AIISSRLRESQHRD 272
+++ + E++ R+
Sbjct: 292 QLVNEVISENRARN 305
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 25/197 (12%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
++ P +VG +IG+ ++ LQ + G ++V +D + G D++ A
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIAKA 197
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLL-----------VPSSEIGCLEGRDG-SLSEMRR 458
++ + + + G+ I++ RL +P++++G + G+ G ++ M+
Sbjct: 198 EQLINDVLSEAESGGS---GIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 254
Query: 459 STGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTTRLR------SYLYR 509
TGA IQ++ P S T+ +QI G +I++A+ + EV + R S Y
Sbjct: 255 RTGARIQVIPLHLPPGDTS-TERTLQIDGSSEQIESAKQLVNEVISENRARNSGMSGGYN 313
Query: 510 DFFQKETPPSSTGPTGS 526
+ PPSS GP G+
Sbjct: 314 QQGYQARPPSSWGPPGA 330
>gi|388503270|gb|AFK39701.1| unknown [Medicago truncatula]
Length = 110
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 594 NRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQI 653
+R+P PL STLE+V+P AV K++ K L ++SGA+V + E + ++ I
Sbjct: 34 HRLP-PL---STLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALI 89
Query: 654 SGTPEQVERAQSVLQGFILST 674
SGT E+ A++++Q FI +T
Sbjct: 90 SGTSEEKRAAENLIQAFITAT 110
>gi|256083131|ref|XP_002577803.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230295|emb|CCD76466.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 322
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ ++ E V KV P E+++ + + G
Sbjct: 6 GPKVELRFLISTKAAGVIIGKGGENIKKIREEYSV--KVTIPDSNGPERVLVLDGDLGSV 63
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E+F +E L +Q+ ++D+ + RLLV S+ GC+ GR G + E+R +G
Sbjct: 64 IEIF--RENLEKMQS-------NRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSG-- 112
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ L ++ C TD ++Q+VG++ D L + L
Sbjct: 113 LHTLKVYQM-LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK+G I+ I+ +GA I V HE PG R +E+S
Sbjct: 143 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELS------ 196
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G S A++ LI + + E+D G G + + GG +
Sbjct: 197 --GNPDQISKAEQ---LIKEVLAEADAGSSGGGSGRKY---------NAPQPGGETF--Q 240
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M ++ VG ++GKGG+ I+ M+ +T +I+++P LP + +E V + G ++
Sbjct: 241 MKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPLH--LPAGDTSTERTVHIDGTPEQIE 298
Query: 256 NAVAIISSRLRESQHRD 272
+A ++ E++ R+
Sbjct: 299 SAKQLVIEVTSENRARN 315
>gi|356566965|ref|XP_003551695.1| PREDICTED: uncharacterized protein LOC100805008 [Glycine max]
Length = 157
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 332 GAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD 391
AAP + + G+D++FR++ P +G+VIG+ ++ ++ + +K+AD + +
Sbjct: 60 AAAPDQSAAKRAKGQDVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHE 119
Query: 392 EQIITISSEEGPDDELFPAQEALLHI 417
E++I ISS++ D+++ A++AL I
Sbjct: 120 ERVIIISSKDN-DEKVTDAEKALEQI 144
>gi|357603478|gb|EHJ63796.1| Heterogeneous nuclear ribonucleoprotein K [Danaus plexippus]
Length = 264
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TTT + D+ AG +IGK+GS I+ IR +GA I + E +PG +RII I+ T R
Sbjct: 185 TTTQVTIPKDL-AGAIIGKAGSRIRKIRAESGAGIEIAEPLPGAADRIITITGTPPR--- 240
Query: 138 GRMPSFSPAQEALFLIHDRILESD 161
Q+A +L+ + ES+
Sbjct: 241 --------IQKAQYLLQQSVHESN 256
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
+T +V +P +I K+ + + + SGA + + E P +II I+GTP ++++A
Sbjct: 185 TTTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGAADRIITITGTPPRIQKA 244
Query: 664 QSVLQ 668
Q +LQ
Sbjct: 245 QYLLQ 249
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 12 YDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPK 71
+ HQ Y G+ R P + +P + Y N+ + +NN+S + +
Sbjct: 300 FSHQSYHGNMDDR--PNSDRRGRPGDRY------NSMSGGYGDNNSSWEPFQSGGRGSYS 351
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
D V TT + D+ AG +IGK G IK IR +GA I + E + G E+RII I+ T
Sbjct: 352 DIGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGT 410
Query: 132 R 132
+
Sbjct: 411 Q 411
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 284 DRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPF 343
DRF + + N RP+ D G Y S + G + S E + S
Sbjct: 298 DRF----SHQSYHGNMDDRPNSDRRGRPGDRYNSMSGGYGDNNSSWEPFQSGGRGSYSDI 353
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGP 403
G + ++ P D G +IG+ ++ +++E G +K+ +P++GS+++IITI+ G
Sbjct: 354 GGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIN---GT 410
Query: 404 DDELFPAQEAL 414
D++ AQ L
Sbjct: 411 QDQIQNAQYLL 421
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQI 466
A +Q+
Sbjct: 129 AQVQV 133
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT- 65
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ +A +I D+ LE D V
Sbjct: 66 ----------NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + S + +N+ A S P T R++ + G +IGK G IK IR+ TGA +
Sbjct: 79 LEEDISSSMTNSTAASRPP-------VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 113 NVH-ELIPGDEERIIEIS 129
V +++P ER I I+
Sbjct: 132 QVAGDMLPNSTERAITIA 149
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VGC++GKGG+ I ++R + + I+I+ R+ + S SE +V + G N++ AV ++
Sbjct: 306 VGCIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLY 365
Query: 263 SRLRESQHR 271
RL + + R
Sbjct: 366 QRLEQEKMR 374
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 52/307 (16%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI 118
+ N++ + + PS R L A +IGK G I IR+ + A +N+ E I
Sbjct: 65 VTNTSTTQSPSSYTPSTPGPIVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESI 124
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
P + ERI+ +S + +A L+ RI +E +
Sbjct: 125 PSNPERILTVSG-----------ALDAVSKAFGLLVRRI------------NDEPFDQPS 161
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
G + R ++ +G ++G+ G I++ ++ + R+ + LP
Sbjct: 162 -------LPGSRAASIRFIIPNSRMGAIIGRQGSKIKE--IQEASGARLHAGETMLPGS- 211
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNN 298
+E I+ + G + + AV + + L L PDR + Y P N
Sbjct: 212 --TERILSITGVADALHIAVYYVGATL--------------LEHPDRGSNNLPYRPAAVN 255
Query: 299 TARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDK 358
A PS+ G+ + + S ++ + P + Q F DLV C I K
Sbjct: 256 RALTPSLVGSPLNSPSASMLALSATNSPKALASVLTPGLQTQQIFIPNDLVG---CIIGK 312
Query: 359 VGRVIGE 365
G+ I E
Sbjct: 313 GGQKINE 319
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 143/353 (40%), Gaps = 54/353 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGKSG + +R TG V +++PG +R++ ++
Sbjct: 44 TLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG--------- 94
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ A L+ +LE G +G GG R+++S
Sbjct: 95 --PLNGTARAYALVAKGLLE----------------GAPQMGMGGIVSNNGTHPVRLLIS 136
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 137 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 191
Query: 260 IISSRLRESQHRDRSHFHGRLHSPD--RFFPDDDYVPHMNNTA-----RRP---SMDGAR 309
I L + R L++P MN + RP + +GA
Sbjct: 192 EIGKCLIDDWQRGTGTI---LYNPAVRASVGTTTSTSTMNQSVGNGYNSRPYNRTGNGAD 248
Query: 310 FSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGI 369
FS +S YG R + + G +++ + +++ P D VG +IG
Sbjct: 249 FSD---QSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGSK 301
Query: 370 VELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEALLHIQTR 420
+ ++ G + +A P D + E++ TI S + + L+ E L +TR
Sbjct: 302 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKTR 354
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + I T + +P+ +GC+ GR GS ++E+RRS+GA I I + P +G + + I
Sbjct: 275 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI---AKAPHDETG-ERMFTI 330
Query: 486 VGEIQAARDAL 496
+G QA AL
Sbjct: 331 MGSAQANEKAL 341
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRD 135
T+ I + + G +IGKSG IK+++ +GA I V + +PG + R +E+S T +
Sbjct: 102 TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQ- 160
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGG--GGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
A LI++ + E+D G + + G ++
Sbjct: 161 ----------ISRAEQLINEVLAEADAASSGNLSSRKYNA-----------PQPGADQF- 198
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+M ++ VG ++GKGG+ I+ M+ ++ +I+++P LP +E V + G
Sbjct: 199 -QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLH--LPPGDPATERTVYIDGTQEQ 255
Query: 254 VKNAVAIISSRLRESQHRD--RSHFHGRLHSPDRFFPDDDYVPHMNNTARRP 303
++ A ++ E++ R+ + + + P R P ++ PH ++P
Sbjct: 256 IETAKQLVIEVTSENRARNPMSGGYSQQGYRPPR--PQSNWGPHGGAPMQQP 305
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 133/333 (39%), Gaps = 54/333 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R L AG +IGK G + +R TG V +++PG +R++ IS + R
Sbjct: 27 TLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGSVDR--- 83
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+A LI +++ S+ + R++
Sbjct: 84 --------VAKAYGLIVAQLVASNPTSPISASSS------------------THTSLRLL 117
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+GG I+ ++ + R++ LP+ +E +V+V G + ++ A
Sbjct: 118 ISHNLMGTIIGRGGTRIKA--IQDNSGARMVASKDMLPQS---TERVVEVHGSVEAIERA 172
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRS 317
V I L E R F P + ++RR S + + GS +S
Sbjct: 173 VDDIGKSLLEDWERGLGTVL--------FHPGAG--DERSGSSRRYSENRGSYGGSR-QS 221
Query: 318 NNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEI 377
N P S +A ++P +++ + P D VG +IG + ++
Sbjct: 222 NGRPGSPGSPSRQAPSSPQPTNLR-------TQNISIPSDMVGCIIGRGGSKITEIRRLS 274
Query: 378 GVDLKVAD-PVDGSDEQIITI-SSEEGPDDELF 408
G + +A P D + E++ TI + E + LF
Sbjct: 275 GSKISIAKAPHDETGERMFTIVGTPEANEKALF 307
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 132/334 (39%), Gaps = 44/334 (13%)
Query: 337 SDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
S S P + L R L G +IG+ V L+++ GV V+ V G ++++T
Sbjct: 17 SRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLT 76
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSE 455
IS + + A L + A + RLL+ + +G + GR G+ +
Sbjct: 77 ISGSVDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTIIGRGGTRIKA 136
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
++ ++GA + + S++ +P T+ +V++ G ++A A+ ++ L R
Sbjct: 137 IQDNSGARM-VASKDMLPQS---TERVVEVHGSVEAIERAVDDIGKSLLEDWERGL---- 188
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPAT-SQPSKEAAGSV 574
G+ L A +R + QS P + PS++A S
Sbjct: 189 ---------GTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSPSRQAPSS- 238
Query: 575 SETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSG 634
P P R T + +P V +I + + +T +SG
Sbjct: 239 ----------------------PQPTNLR-TQNISIPSDMVGCIIGRGGSKITEIRRLSG 275
Query: 635 ASVSLVEG-QPEGTQKIIQISGTPEQVERAQSVL 667
+ +S+ + E +++ I GTPE E+A +L
Sbjct: 276 SKISIAKAPHDETGERMFTIVGTPEANEKALFLL 309
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 68 SNPKDP---SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHELIPGDEE 123
SNP P S T+ R+L G +IG+ G+ IK+I+ ++GA + +++P E
Sbjct: 98 SNPTSPISASSSTHTSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTE 157
Query: 124 RIIEISDT-----RRRDPEGR--MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG 176
R++E+ + R D G+ + + + E G Y E YGG
Sbjct: 158 RVVEVHGSVEAIERAVDDIGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGG 217
Query: 177 GGGVGG-GGFRGGGNRVA-----------TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQ 224
G G G +R A + + VGC++G+GG I ++R + ++
Sbjct: 218 SRQSNGRPGSPGSPSRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSK 277
Query: 225 IRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHR 271
I I H E + +VG + A+ ++ ++L + R
Sbjct: 278 ISIAKAPHD-----ETGERMFTIVGTPEANEKALFLLYNQLESEKER 319
>gi|256083129|ref|XP_002577802.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230296|emb|CCD76467.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 368
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ ++ E V KV P E+++ + + G
Sbjct: 6 GPKVELRFLISTKAAGVIIGKGGENIKKIREEYSV--KVTIPDSNGPERVLVLDGDLGSV 63
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E+F +E L +Q+ ++D+ + RLLV S+ GC+ GR G + E+R +G
Sbjct: 64 IEIF--RENLEKMQS-------NRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSG-- 112
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ L ++ C TD ++Q+VG++ D L + L
Sbjct: 113 LHTLKVYQM-LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 38/347 (10%)
Query: 330 EAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
E ++P S +P L R L + G +IG+ + ++ + V V+ V G
Sbjct: 11 EVSSSPNGHSDEP----QLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPG 66
Query: 390 SDEQIITISSEEGPDDELFPAQEALLHIQTRIVD-------LGADKDNIITTRLLVPSSE 442
+++ ++S F A+ A L ++T + D +GA + RLL+ +
Sbjct: 67 VQDRVFSVSGAVDHVAAAF-AEVARLLLETPLSDSSLPPPPVGA----FTSVRLLISHNL 121
Query: 443 IGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTT 501
+G + GR G+ + +++ +GA + + S+E +P T+ +V+I G ++A + A++E+
Sbjct: 122 MGTVIGRSGAKIKQIQDESGARM-VASKEMLPQS---TERVVEIQGSVEAIKTAVLEIGK 177
Query: 502 RLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIP 561
L R+ P + G G + QTVT +S P
Sbjct: 178 CLMEDWERNTGTVLYHPGAAGDAGV-----------LAGGLGAQTVTGGLGGIRRSSVAP 226
Query: 562 ATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITK 621
+ + +E+ R D P ++N L T + +P V +I +
Sbjct: 227 SFGFGGERRMSGRPSISAPSETRRVSDAPPMVNDPNL-----RTQNISIPSDMVGCIIGR 281
Query: 622 SKTLLTRFSEMSGASVSLVEG-QPEGTQKIIQISGTPEQVERAQSVL 667
T +T +SG+ +S+ + E +++ I GT + ERA +L
Sbjct: 282 GGTKITEIRRLSGSRISIAKAPHDETGERMFTIVGTADATERALMLL 328
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
NN + ++ N + +P L + R L +AG +IGK G I IR T
Sbjct: 4 NNISPTQEVSSSPNGHSDEPQL----SLRALVSTKEAGILIGKGGQTIADIRAKTNVKAG 59
Query: 114 VHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFL--IHDRILESDGGGGFYGEEE 171
V +++PG ++R+ +S + +F+ L + D L G F
Sbjct: 60 VSKVVPGVQDRVFSVSGAV----DHVAAAFAEVARLLLETPLSDSSLPPPPVGAF----- 110
Query: 172 EEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD 231
+ R+++S +G ++G+ G I+Q++ E+ R++
Sbjct: 111 --------------------TSVRLLISHNLMGTVIGRSGAKIKQIQDESGA--RMVASK 148
Query: 232 HSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRD 272
LP+ +E +V++ G + +K AV I L E R+
Sbjct: 149 EMLPQS---TERVVEIQGSVEAIKTAVLEIGKCLMEDWERN 186
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 430 NIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGE 488
N+ T + +PS +GC+ GR G+ ++E+RR +G+ I I + P +G + + IVG
Sbjct: 262 NLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISI---AKAPHDETG-ERMFTIVGT 317
Query: 489 IQAARDALVEVTTRLRSYLYRDFFQKE 515
A AL+ + ++L S R Q +
Sbjct: 318 ADATERALMLLYSQLESEKERRMLQAQ 344
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 50/251 (19%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK+G I+ I+ +GA I V HE PG R +E+S
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELS------ 192
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G+ S A++ LI + + E+D G G +Y + G +
Sbjct: 193 --GKPEQISKAEQ---LIKEVLAEADAGSSGAGSGGRKYNA--------TQPGAETF--Q 237
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M ++ VG ++GKGG+ I+ M+ + +I+++P LP + +E V + G ++
Sbjct: 238 MKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLH--LPAGDTSTERTVHIDGTQEQIE 295
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A +IS E R ++ P N AR P G +S Y
Sbjct: 296 AAKQLISEVTSELARRTANY------------------PGEQNRARNPMSGG--YSQQGY 335
Query: 316 R----SNNYGP 322
R +N+GP
Sbjct: 336 RPPRPQSNWGP 346
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH 416
+VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +F A ++
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAIFKAFAMIID 58
Query: 417 -----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSRE 470
I + + + A +T RL+VP+S+ G L G+ G + E+R STGA +Q+ + +
Sbjct: 59 KLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV-AGD 117
Query: 471 EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALV 529
+P + T+ + I G Q+ + + ++ + L + + T P P+ S ++
Sbjct: 118 MLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVI 173
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD-EERIIEISDTRR 133
L VT T R+L H + G +IGK G +K IR+ +GA IN+ E G+ ERII ++
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTG--- 63
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P+ + +A +I D+ LE D V
Sbjct: 64 -------PT-NAIFKAFAMIIDK-LEEDINSSMTNSTAASR---------------PPVT 99
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+++ G L G+ G + E+R STG
Sbjct: 69 FKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 65 RANSNPKD-PSL--MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPG 120
R N P D PS+ T + + + + G VIGK GS IK I+ +GA +N E ++PG
Sbjct: 134 RINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPG 193
Query: 121 DEERIIEISDTRRR-------------DPEGRMPSFSPAQEALFLIHDRILESDGGGGFY 167
ER++ ++ + + RMPS S + R G
Sbjct: 194 STERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRPSSNPSRRAPYQGSSYVP 253
Query: 168 GEEEEEYGGGGGVGGGGFRGGGNRVATRMV-VSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
G Y G G ++ T+ + + VGC++GKGG I ++R + +QI+
Sbjct: 254 G-----YSQPFGSGPPPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIK 308
Query: 227 ILPRDHSLPRCVSM------------SEEIVQVVGDINNVKNAVAIISSRLRESQHR 271
I+ P V + E +V + G N++ AV ++ RL + + +
Sbjct: 309 IME-----PGAVGVGMNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLEQEKQK 360
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
R L A +IGK GS + IR+ +GA + V E IPG+ ERI+ +S
Sbjct: 71 RCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVS 118
>gi|238883031|gb|EEQ46669.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 365
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+L +AG +IG +G +I SIR T + LIPG ERI+ +S + D +
Sbjct: 71 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSG-KLDDCAKAL 129
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
F+ A LI+ I E Y R+++
Sbjct: 130 SYFAQA-----LINANI--------------ESYNYFPLKQLSSTPNTEETTILRLLIPN 170
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+G L+G G I+Q ++ I ++ LP +E +V++ G ++++ +++ I
Sbjct: 171 SQMGTLIGSKGARIQQ--LQNNFNISMIASKSFLP---GSNERLVELQGTVDDLYDSLRI 225
Query: 261 ISSRLRE 267
IS L E
Sbjct: 226 ISRCLIE 232
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 79/249 (31%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQI---RILPRDHSLPRCVSMSEEIVQVVGDI 251
R++VS GCL+G G++I+ +R ET T+ R++P H E I+ V G +
Sbjct: 72 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSH---------ERILTVSGKL 122
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
++ A+ S+F L +
Sbjct: 123 DDCAKAL---------------SYFAQALIN----------------------------- 138
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+N S NY P + + P ++ E + R+L P ++G +IG ++
Sbjct: 139 -ANIESYNYFPLK-----QLSSTPNTE-------ETTILRLLIPNSQMGTLIGSKGARIQ 185
Query: 372 LLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LQN + + + + GS+E+++ + +G D+L+ + L I +R L D +
Sbjct: 186 QLQNNFNISMIASKSFLPGSNERLVEL---QGTVDDLYDS----LRIISRC--LIEDFSS 236
Query: 431 IITTRLLVP 439
I+ T VP
Sbjct: 237 IVGTTYYVP 245
>gi|68473490|ref|XP_719303.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
gi|46441115|gb|EAL00415.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
Length = 369
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+L +AG +IG +G +I SIR T + LIPG ERI+ +S + D +
Sbjct: 73 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSG-KLDDCAKAL 131
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
F+ A LI+ I E Y R+++
Sbjct: 132 SYFAQA-----LINANI--------------ESYNYFPLKQLSSTPNTEETTILRLLIPN 172
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+G L+G G I+Q ++ I ++ LP +E +V++ G ++++ +++ I
Sbjct: 173 SQMGTLIGSKGARIQQ--LQNNFNISMIASKSFLP---GSNERLVELQGTVDDLYDSLRI 227
Query: 261 ISSRLRE 267
IS L E
Sbjct: 228 ISRCLIE 234
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 79/249 (31%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQI---RILPRDHSLPRCVSMSEEIVQVVGDI 251
R++VS GCL+G G++I+ +R ET T+ R++P H E I+ V G +
Sbjct: 74 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSH---------ERILTVSGKL 124
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
++ A+ S+F L +
Sbjct: 125 DDCAKAL---------------SYFAQALIN----------------------------- 140
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+N S NY P + + P ++ E + R+L P ++G +IG ++
Sbjct: 141 -ANIESYNYFPLK-----QLSSTPNTE-------ETTILRLLIPNSQMGTLIGSKGARIQ 187
Query: 372 LLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LQN + + + + GS+E+++ + +G D+L+ + L I +R L D +
Sbjct: 188 QLQNNFNISMIASKSFLPGSNERLVEL---QGTVDDLYDS----LRIISRC--LIEDFSS 238
Query: 431 IITTRLLVP 439
I+ T VP
Sbjct: 239 IVGTTYYVP 247
>gi|68473725|ref|XP_719187.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
gi|46440993|gb|EAL00294.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
Length = 368
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+L +AG +IG +G +I SIR T + LIPG ERI+ +S + D +
Sbjct: 72 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSG-KLDDCAKAL 130
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
F+ A LI+ I E Y R+++
Sbjct: 131 SYFAQA-----LINANI--------------ESYNYFPLKQLSSTPNTEETTILRLLIPN 171
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+G L+G G I+Q ++ I ++ LP +E +V++ G ++++ +++ I
Sbjct: 172 SQMGTLIGSKGARIQQ--LQNNFNISMIASKSFLP---GSNERLVELQGTVDDLYDSLRI 226
Query: 261 ISSRLRE 267
IS L E
Sbjct: 227 ISRCLIE 233
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 79/249 (31%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQI---RILPRDHSLPRCVSMSEEIVQVVGDI 251
R++VS GCL+G G++I+ +R ET T+ R++P H E I+ V G +
Sbjct: 73 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSH---------ERILTVSGKL 123
Query: 252 NNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFS 311
++ A+ S+F L +
Sbjct: 124 DDCAKAL---------------SYFAQALIN----------------------------- 139
Query: 312 GSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
+N S NY P + + P ++ E + R+L P ++G +IG ++
Sbjct: 140 -ANIESYNYFPLK-----QLSSTPNTE-------ETTILRLLIPNSQMGTLIGSKGARIQ 186
Query: 372 LLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN 430
LQN + + + + GS+E+++ + +G D+L+ + L I +R L D +
Sbjct: 187 QLQNNFNISMIASKSFLPGSNERLVEL---QGTVDDLYDS----LRIISRC--LIEDFSS 237
Query: 431 IITTRLLVP 439
I+ T VP
Sbjct: 238 IVGTTYYVP 246
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
T+ +I + + G +IGK+G I+ I+ +GA I V HE PG R +E+S
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELS------ 192
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
G+ S A++ LI + + E+D G G +Y G F+
Sbjct: 193 --GKPEQISKAEQ---LIKEVLAEADAGSSGAGSGGRKYNATQ-PGAETFQ--------- 237
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M ++ VG ++GKGG+ I+ M+ + +I+++P LP + +E V + G ++
Sbjct: 238 MKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLH--LPAGDTSTERTVHIDGTQEQIE 295
Query: 256 NAVAIIS 262
A +IS
Sbjct: 296 AAKQLIS 302
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 28 RYNHYYQPNNNYRHRGNN---NNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRIL 84
R N +PN++ R R + +N +NN+S ++ + + D V TT +
Sbjct: 312 RGNADARPNSDRRGRPGDRYGDNMGGGGYDNNSSWDSYQSGGRGSYNDMGGPVITTQVTI 371
Query: 85 CHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
D+ AG +IGK G IK IR +GA I + E + G E+RII IS T+
Sbjct: 372 PKDL-AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQ 418
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 280 LHSPDRFFPDDDYV--PHMNNTARRPSMD-----GARFSGSNYRSNNYGPRPSGYSIEAG 332
L P R DD Y + N RP+ D G R+ G N Y S S ++G
Sbjct: 294 LAPPHRGGGDDQYSYDSYRGNADARPNSDRRGRPGDRY-GDNMGGGGYDNNSSWDSYQSG 352
Query: 333 AAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
S G + ++ P D G +IG+ ++ +++E G +K+ +P++GS++
Sbjct: 353 G---RGSYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 409
Query: 393 QIITISSEEGPDDELFPAQEAL----LHI 417
+IITIS G D++ AQ L LH+
Sbjct: 410 RIITIS---GTQDQIQNAQYLLQNSALHL 435
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 137/335 (40%), Gaps = 60/335 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++PG +R++ I+ G
Sbjct: 59 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTIT--------GG 110
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S +A + ++E G +G GG ++++S
Sbjct: 111 CEAIS---KAYAKVASALME----------------GAPAMGMGGVVAANGTHPIKLLIS 151
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ A
Sbjct: 152 HNQMGTVIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERVVEVQGTPEGIQRATW 206
Query: 260 IISSRLRESQHRDRSHFHGRLHSP---------------DRFFPDDDYVPHMNNTARRPS 304
I L + R + L++P +P + P+ ++ +
Sbjct: 207 EICKCLVDDWQRGQGTV---LYNPVVRTGTGAGAPAMGGASSYP-QERAPYGGSSRVTRT 262
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVI 363
+GA FS N GPR ++ AA GE++ + + P D VG +I
Sbjct: 263 GNGADFS-------NGGPRQYNRRSDSDAAQRGPPTHDENGEEIQTQNISIPADMVGCII 315
Query: 364 GESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI 397
G + + ++ G + +A P D + E++ TI
Sbjct: 316 GRAGSKISEIRKTSGARISIAKAPHDDTGERMFTI 350
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ ++ E V KV P E+++ + + G
Sbjct: 6 GPKVELRFLISTKAAGVIIGKGGENIKKIREEYSV--KVTIPDSNGPERVLVLDGDLGSV 63
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E+F +E L +Q+ ++D+ + RLLV S+ GC+ GR G + E+R +G
Sbjct: 64 IEIF--RENLEKMQS-------NRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSG-- 112
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ L ++ C TD ++Q+VG++ D L + L
Sbjct: 113 LHTLKVYQM-LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ ++ E V KV P E+++ + + G
Sbjct: 6 GPKVELRFLISTKAAGVIIGKGGENIKKIREEYSV--KVTIPDSNGPERVLVLDGDLGSV 63
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E+F +E L +Q+ ++D+ + RLLV S+ GC+ GR G + E+R +G
Sbjct: 64 IEIF--RENLEKMQS-------NRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSG-- 112
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ L ++ C TD ++Q+VG++ D L + L
Sbjct: 113 LHTLKVYQM-LCPCSTDRVIQLVGDVGKVLDCLRSIAELL 151
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T + ++ + K G +IGK+G I+ ++ ++GA I + D S +R +
Sbjct: 175 TMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADP-----YSASRPVELI 229
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGF---RGGGNRVAT 194
G + + + A++ LI D I E+D GG + GF + G
Sbjct: 230 GSLENINKAEK---LIKDVIAEADAGGS------------PSLVARGFATAQAVGAAEQV 274
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
++ V VG ++GKGG+ I+ ++ + +I+++P+ LP E V+V GD +
Sbjct: 275 QIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQ--HLPEGDQSKERTVRVTGDKKQI 332
Query: 255 KNAVAII 261
+ A +I
Sbjct: 333 EMAREMI 339
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 169/412 (41%), Gaps = 80/412 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
+IL G +IGK G I++I + + ++VH + G E++I I +PE
Sbjct: 195 KILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHGKENSGLLEKVISIYG----NPEN-- 248
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
S +E L ++ + + + E + +++
Sbjct: 249 -CTSACKEILLVMQNELSSPNRTSSSVQE----------------------IVLKILADN 285
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRI---------LPRDHSLPRCVSM-SEEIVQVVGD 250
+ G ++G+ G++I+++R +T+T+I + L H L SM E ++ V GD
Sbjct: 286 RYCGRVIGREGRVIKKIREDTQTKITVSNDSDHLLELGHGHGLQDVASMFPERVISVRGD 345
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
I+++ A IS+ LRE +D +H P D + P M GA
Sbjct: 346 IDHMSEAEGAISTILRECAEKD-------MHQPQL---DPRMMAMPGAMGGLPMMQGAGA 395
Query: 311 SGSN-----------YRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKV 359
G Y G + G+ +G+ +++ Q + P V
Sbjct: 396 GGIYPGGGPGFYPGMYPGVQQGHQDMGFPPSSGSNSPTETCQ----------ICVPNSAV 445
Query: 360 GRVIGES----EGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
G +IG + + I+ Q + ++ K D + + E+I++I +G D ++ A +
Sbjct: 446 GALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSI---KGTQDSIWRASYYVF 502
Query: 416 HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI 466
+ + + D + T + VP +G + G+ G ++ E++R TGA I++
Sbjct: 503 E-KLKSEGFSGNDDVRLRTAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIKL 553
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 45/201 (22%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD----EERIIEISDTRR 133
T T +I + G +IG +GS IK I + + A++ + D ERI+ I T
Sbjct: 433 TETCQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGT-- 490
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q++++ + E GF G ++ R+
Sbjct: 491 -------------QDSIWRASYYVFEKLKSEGFSGNDDV------------------RLR 519
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
T + V + VG ++GKGGK + +++ T I+ LP D + V E +V+ G +
Sbjct: 520 TAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIK-LPEDQT----VQGDEVVVEAYGTFMS 574
Query: 254 VKNA---VAIISSRLRESQHR 271
V +A + ++ + R+ Q R
Sbjct: 575 VHSAHSRIRALAEKQRQQQMR 595
>gi|218191842|gb|EEC74269.1| hypothetical protein OsI_09495 [Oryza sativa Indica Group]
Length = 263
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 60/288 (20%)
Query: 119 PGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGG 178
PG +RII +S F +A+ LI +++L GEE E
Sbjct: 5 PGTNDRIIMVSGL-----------FDEVIKAMELILEKLLAE-------GEESNE----- 41
Query: 179 GVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCV 238
R R+VV G ++GKGG I+ ++ I+I P+D++ V
Sbjct: 42 ---------AEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNF---V 89
Query: 239 SMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRF----FPDDDYVP 294
+ + +V V G +++ A+ +I S+L E H+ L SP + FP VP
Sbjct: 90 GLHDRLVTVTGPLDHQMRAIYLILSKLSED-----VHYPPNLSSPFPYAGLGFPSYPGVP 144
Query: 295 HMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC 354
+ P + NY N YG R +P ++ Q + L +
Sbjct: 145 VGYMIPQVPYNNAV-----NYGPNGYGGRYQNKPSTPMRSPANNDAQ----DSLTIGIAD 195
Query: 355 PIDKVGRVIGES-EGIVELLQNEIGVDLKVADPVD---GSDEQIITIS 398
+ +G V+G + I E++Q G +K++D D G+ E+ +TI+
Sbjct: 196 --EHIGAVVGRAGRNITEIIQAS-GARIKISDRGDFIAGTSERKVTIT 240
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 141/361 (39%), Gaps = 68/361 (18%)
Query: 58 SINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHEL 117
S N S+ + S P + + R L AG VIGKSG I+++R+ A IN
Sbjct: 3 SSNESSGHSRSKKSQPCIEL----RFLIPSKAAGSVIGKSGENIRNLRRMFMARIN---- 54
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
ISD PE R+ S + + I + LE G
Sbjct: 55 ----------ISDNS--GPE-RILSLEADLDTILEILTQCLEKMEGCIPLPR-------- 93
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
G G N V RM+V++ VG L+G+GG I +R K +R+L ++ C
Sbjct: 94 --AGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDLR--EKCDLRVLKVYQTV--C 147
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRES--------------QHRDRSHFHGRLHSP 283
++ IVQ+VG I V + + I +E+ H +H+ G +
Sbjct: 148 PDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYDAQNYDHAAANHYGGWAQNA 207
Query: 284 DRFFPDDDYVPHMNNTARRPSMDGARF--SGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQ 341
R P+ N T R F ++Y++ +Y YS M S +
Sbjct: 208 IR--------PNNNLTTRSLGFSRPGFLKHQASYKNEHY-----DYSYPNNYREMDTSFR 254
Query: 342 -PFYGE---DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
Y E + V + P VG +IG ++ ++ + G + ++ P E+++TI
Sbjct: 255 NSHYDEQDNNEVQEIRLPHKVVGAIIGPGGSRIQQVRMDSGAHITISSPDRNPQERVVTI 314
Query: 398 S 398
S
Sbjct: 315 S 315
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 59
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 60 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 119
Query: 462 ANIQI 466
A +Q+
Sbjct: 120 AQVQV 124
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 33/153 (21%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 3 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG------ 54
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR--VAT 194
P+ + +A +I D+ LE D +R V
Sbjct: 55 ----PT-NAIFKAFAMIIDK-LEEDISSSMTNST-----------------AASRPPVTL 91
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 92 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 124
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 51/223 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ERIIEIS---DTRRRDP 136
R+L AG VIGK G IK +R A + IP + ERI+ I D R
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATLT----IPDSQTPERIVTIVAEIDNVIRCV 96
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+P E L + +SD G GE E R+
Sbjct: 97 NEIIPRLD---ECL-----KTRDSDDEGSARGESE----------------------LRL 126
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V + H G ++G+GG I+++R ET TQ+++ + C +E ++Q++G +
Sbjct: 127 LVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQC-----CPQSTERVIQIIGVPEKIIA 181
Query: 257 AVAIISSRLRESQHRDRSH-FHGRLHSPDR------FFPDDDY 292
V +I + L+E + S + + P+ F PD +Y
Sbjct: 182 CVILIINMLKEIPIKGPSRPYESMFYDPNFVHEYGGFPPDRNY 224
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 605 TLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
T +V +P+ +I K + R E SGA + +VE Q +++II ISG+ Q++ AQ
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHI-VVEPQQPNSERIITISGSHAQIQTAQ 328
Query: 665 SVLQGFIL 672
+LQ +I+
Sbjct: 329 YLLQQWIV 336
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPE 137
++IL + AG +IGK G I I+ T A + + ++ PG ER+ I T +
Sbjct: 30 FKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTI----D 85
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+ F E ++ + IL S GG E + +++
Sbjct: 86 SILRVFQYISEKIYEKPESILRSTNKGGRMPAERHK-------------------QVKIL 126
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSL---PRCVSMSEEIVQVVGDINNV 254
V G ++GKGG I++++ T I++ + L RCV+++ E+ Q + +
Sbjct: 127 VPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKELNLAERCVTVAGELPQTFEAVKQL 186
Query: 255 KNAVA 259
+A
Sbjct: 187 LFKIA 191
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 344 YGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD---GSDEQIITISSE 400
Y ++ F++L P G +IG+ + +QN+ +K++ D G+ E++ I
Sbjct: 24 YEGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGT 83
Query: 401 --------EGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS 452
+ ++++ E++L + + A++ + ++LVP+S G + G+ GS
Sbjct: 84 IDSILRVFQYISEKIYEKPESILRSTNKGGRMPAERHKQV--KILVPNSTAGIIIGKGGS 141
Query: 453 -LSEMRRSTGANIQILSREE----VPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
+ E++ STG IQ+ + + CV+ EL Q +A + L ++ +S
Sbjct: 142 FIKEVKESTGVFIQVSQKSKELNLAERCVTVAGELPQT---FEAVKQLLFKIADDPQSSS 198
Query: 508 YRDFFQKET--PPSSTGPTGS--ALVVEAASPID 537
+ E P +S PTGS ALV+ ++ I+
Sbjct: 199 CPNISYAEVPRPVASAYPTGSPYALVLGSSFGIN 232
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLA---GPTNAI 80
Query: 408 FPAQEALL-----HIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+S+ G L G+ G + E+R STG
Sbjct: 81 FKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 140
Query: 462 ANIQI 466
A +Q+
Sbjct: 141 AQVQV 145
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRR 134
L VT T R+L H + G +IGK G +K +R+ +GA IN+ E ERII ++
Sbjct: 22 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAG---- 75
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
P+ + +A +I D+ LE D V
Sbjct: 76 ------PT-NAIFKAFAMIIDK-LEEDISSSMTNSTAASR---------------PPVTL 112
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+VV G L+GKGG I+++R T Q+++
Sbjct: 113 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 145
>gi|443924046|gb|ELU43123.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 386
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R L +AG +IGK G + +R+ TG V +++ G ER++ +S T +
Sbjct: 41 TLTLRALVTTKEAGVIIGKGGKNVADLREQTGVKAGVSKVVQGVNERVLSVSGTVEDVAK 100
Query: 138 GRMPSFSPA--QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
R PA A LI ++L+S + R
Sbjct: 101 ARYSLHRPAILHFAYTLIITQLLQSAPSSPGAPPPPPSS---------------THTSLR 145
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++S +G ++G+GG I+ ++ + R++ LP+ +E +V+V G ++
Sbjct: 146 LLISHNLMGTIIGRGGLKIKA--IQDNSGARMVASKEMLPQS---TERVVEVQGSSESIG 200
Query: 256 NAVAIISSRLRESQHR 271
A+A I L E R
Sbjct: 201 RAIAEIGRCLLEDWER 216
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT +I + K G +IGK+G I+ ++ ++GA I + D + TR + G
Sbjct: 198 TTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADAD-----PLCATRSVELIG 252
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV- 197
+ S A++ L++ I E+D GG + G V + +
Sbjct: 253 SLESIDKAEK---LMNAVIAEADAGGSP------------SLVARGLSPAQATVGSEQIQ 297
Query: 198 --VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
V VG ++G+GG+ I+ ++ ++ +I+++P+ LP E VQV GD ++
Sbjct: 298 IQVPNEKVGLIIGRGGETIKSLQTKSGARIQLIPQH--LPEGDDSKERTVQVTGDKRQIE 355
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDR 285
A +I + + F + + P R
Sbjct: 356 IAQELIKEVMNQPVRPSSGGFGQQAYRPPR 385
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 149/342 (43%), Gaps = 54/342 (15%)
Query: 358 KVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLH- 416
+VG +IG+ V+ ++ E G + +++ E+IIT++ GP + +F A ++
Sbjct: 5 EVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLT---GPTNAIFKAFAMIIDK 59
Query: 417 ----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREE 471
I + + + A +T RL+VP+++ G L G+ G + E+R STGA +Q+ + +
Sbjct: 60 LEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDM 118
Query: 472 VPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVV- 530
+P + T+ + I G Q+ + + ++ + L S P G + +
Sbjct: 119 LP---NSTERAITIAGVPQSVTECVKQICLVMLETL------------SQSPQGRVMTIP 163
Query: 531 ----EAASPIDITPARE-VQTVTDPPAATHQSVQIPATSQPSKEAAGSVS--ETVKQNES 583
A+SP+ ++ P ATH ++ P S + ++S + K N+
Sbjct: 164 YQPMPASSPVICAGGQDRCSDAAGYPHATHD-LEGPPLDAYSIQGQHTISPLDLAKLNQV 222
Query: 584 ERREDVPTVIN------------------RVPLPLVTRSTLEVVLPDYAVPKLITKSKTL 625
R++ +++ L T++T E+ +P+ + +I +
Sbjct: 223 ARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGAN 282
Query: 626 LTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
+ +MSGA + + + + + I+G+ + AQ ++
Sbjct: 283 INEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 324
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 64 INSSMTNSTAASRPP-----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 118
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 119 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 172
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 88/190 (46%), Gaps = 31/190 (16%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDPE 137
++L AG +IGK G I +++ TG + + ++ PG +ER+ ++
Sbjct: 79 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTG------- 131
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
P S A+F++ D+I ES G G E ++V
Sbjct: 132 ---PVESLNNVAVFIL-DKIKESPQLGVKAGAET-------------ITSPERARQVKIV 174
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V G ++GKGG +I+ + ++ ++++I + +++SE ++ + G+ +N + A
Sbjct: 175 VPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDG----ITLSERVITISGESDNNRKA 230
Query: 258 VAIISSRLRE 267
++ I ++++E
Sbjct: 231 MSFIVNKIQE 240
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 190 NRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVG 249
N+ +M++ G ++GKGG+ I Q++ +T T +++ + P E + + G
Sbjct: 75 NKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYP---GTQERVALLTG 131
Query: 250 DINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDR 285
+ ++ N I +++ES + SP+R
Sbjct: 132 PVESLNNVAVFILDKIKESPQLGVKAGAETITSPER 167
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 342 PFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEE 401
P + D V+R++ P+ KVG +IG +++ + E +++ D ++I+ IS +E
Sbjct: 21 PGWPRDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKE 80
Query: 402 GPDDELFPAQEALLHIQTRIVDLGA 426
P+ L PA +A+L + R+ L A
Sbjct: 81 EPEAALSPAMDAVLRVFKRVSGLSA 105
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
YR++ K G +IG+ G +IK + T A I + + P +RI+ IS + +PE
Sbjct: 28 VYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISG--KEEPEA- 84
Query: 140 MPSFSPAQEALFLIHDRI 157
+ SPA +A+ + R+
Sbjct: 85 --ALSPAMDAVLRVFKRV 100
>gi|242058519|ref|XP_002458405.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
gi|241930380|gb|EES03525.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
Length = 343
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 32/199 (16%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS 142
I + K G +IGK+G I+++++ +GAWI + + D + TR G+ S
Sbjct: 159 IEVPNSKVGVLIGKAGETIRNLQKSSGAWIQIAKHADVDSNAL-----TRSVLLVGKPGS 213
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
A++ LI I E++ GF G G G F M V
Sbjct: 214 VDKAEQ---LIESVIAEAEAARGF---------GSGQSGSEQF---------DMAVPNNK 252
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP-RCVSMSEEIVQVVGDINNVKNAVAII 261
+G ++GK G+ I+ +++++ +I +P+ +P V+ + IV+V G+ ++ A +I
Sbjct: 253 IGLIIGKRGETIKDLQLKSGARIEFIPK---IPLEGVTSTGRIVRVTGNKQQIEVAKDLI 309
Query: 262 SSRLRES--QHRDRSHFHG 278
+ ++ +H ++S +G
Sbjct: 310 KQAVNQTFPKHTNQSGRYG 328
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DP+ T R L +AG +IGK G+ + +R+ TG V +++PG +R++ ++ T
Sbjct: 47 DPN--ATLQLRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKVVPGVHDRVLSVTGT 104
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+A LI ILE+ + G
Sbjct: 105 -----------LVGISDAFALIAKTILENPLNAPVQAD------------GSPAEAAAQT 141
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ R+++S +G ++G+ G I+ ++ + R++ LP+ +E +V+V G +
Sbjct: 142 TSVRLLISHNLMGTVIGRQGLKIKH--IQDLSGARMVASKEMLPQS---TERVVEVQGSV 196
Query: 252 NNVKNAVAIISSRLRESQHR 271
+ ++ A+ I+ L E R
Sbjct: 197 DAIRVAIHEIAKCLAEDWDR 216
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 148/369 (40%), Gaps = 62/369 (16%)
Query: 48 NTNNIMNNNT--SIN--NSNNRANSNPKDPSLMVTT--TYRILCHDMKAGGVIGKSGSII 101
N N++ +N S+N N R N PK + T R + +AG +IGK+G +
Sbjct: 9 NANHVDDNGLAESLNQLNVGERENEQPKTEEDYAQSQLTLRAIVSTKEAGVIIGKAGKNV 68
Query: 102 KSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD 161
+R+ TG V +++ G +R++ ++ S +A L+ +LE
Sbjct: 69 ADLREETGVKAGVSKVVQGVHDRVLTVTG-----------PLSGIAKAYSLVAKGLLE-- 115
Query: 162 GGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMET 221
G VG GG R+++S +G ++G+ G I+ ++
Sbjct: 116 --------------GAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIKH--IQD 159
Query: 222 KTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLH 281
+ +R++ + LP+ +E IV+V G + AV I L + R L+
Sbjct: 160 VSGVRMVAQKEMLPQS---TERIVEVQGTPEGIDKAVWEIGKCLVDDWQRGTGTV---LY 213
Query: 282 SPD-RFFPDDDYVPHMNNTARRPSMDGARFSGSNY----RSNNYGPRPSGYSIEAGAAPM 336
+P R +P P++ G +G+NY RS N + +S G
Sbjct: 214 NPAVRVQVGSGPLP--------PAVGGGLPAGNNYIGGGRSYNRTGNGADFSESRGYTRG 265
Query: 337 SDSVQ---PFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVD 388
+D + P ED + P D VG +IG + ++ G + +A P D
Sbjct: 266 NDLPRGGIPMVTEDGEEVQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHD 325
Query: 389 GSDEQIITI 397
+ E++ TI
Sbjct: 326 DTGERMFTI 334
>gi|299116281|emb|CBN76089.1| poly(rc) binding protien (Partial) [Ectocarpus siliculosus]
Length = 334
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 349 VFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG----SDEQIITISSEEGPD 404
V R+L P K+G VIG+ I++ ++ G + ++D G SD++++T +
Sbjct: 102 VSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAG----- 156
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNII------------TTRLLVPSSEIGCLEGRDG- 451
Q A HI + +G D D ++ + RLL+P+ + G L GR G
Sbjct: 157 -TFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGC 215
Query: 452 SLSEMRRSTGANIQILSRE 470
++ +R +GA I+I S
Sbjct: 216 TIKAIREQSGARIEISSHA 234
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV 114
V ++R+L ++KAGG+IG+ G IK+IR+ +GA I +
Sbjct: 193 VANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEI 230
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG----DEERIIEISDTRRR 134
T R+L + K G VIGK G+IIK IR+ +GA + + + G ++R++ + T
Sbjct: 101 TVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGT--- 157
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
F+ Q A I G G + + G G G + VA
Sbjct: 158 --------FNSVQLAFTHILSHA-------GAVGPDADPVMGLAG-------GDPDCVAN 195
Query: 195 --RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R+++ + G L+G+GG I+ +R ++ +I I
Sbjct: 196 SFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEI 230
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 348 LVF-RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD----GSDEQIITISSEEG 402
L F +ML G VIG++ I+ ++N+ G LK++ P + + E+++ + G
Sbjct: 16 LCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLS-PTNSYFPNTQERVLVLC---G 71
Query: 403 PDDELFPAQEALLHIQTRI----VDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS- 452
+++ ALL I +I V DK N+ T R+++P S + G+ G
Sbjct: 72 KQEQI---NNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKSAASAIIGKGGQQ 128
Query: 453 LSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDALVEVTTRLRS 505
+ +++ STGA IQI SRE+ G +E ++ I+G ++ D ++VT +++
Sbjct: 129 IKQLQDSTGAKIQISSRED------GLNERIISIIGPFESISDTAIKVTNSIQN 176
>gi|241956728|ref|XP_002421084.1| RNA-binding protein, putative [Candida dubliniensis CD36]
gi|223644427|emb|CAX41241.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 377
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+L +AG +IG +G +I SIR T + LIPG ERI+ +S + D +
Sbjct: 83 YRVLVSAKEAGCLIGTNGQVIDSIRNETSTKAGISRLIPGSHERILTVSG-KLDDCAKAL 141
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
F+ A LI+ I E Y + R+++
Sbjct: 142 SYFAQA-----LINGNI--------------ENYNYFPLKQLSSTPNTNDTTILRLLIPN 182
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+G L+G G I+Q ++ I ++ LP +E +V++ G ++++ +++ I
Sbjct: 183 SQMGTLIGFKGIRIQQ--LQNNYNISMIASKSFLP---GSNERLVELQGTVDDLYDSLRI 237
Query: 261 ISSRLRE 267
IS L E
Sbjct: 238 ISRCLIE 244
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQI---RILPRDHSLPRCVSMSEEIVQVVGDI 251
R++VS GCL+G G++I+ +R ET T+ R++P H E I+ V G +
Sbjct: 84 RVLVSAKEAGCLIGTNGQVIDSIRNETSTKAGISRLIPGSH---------ERILTVSGKL 134
Query: 252 NNVKNAVAIISSRLRESQHRDRSHF 276
++ A++ + L + ++F
Sbjct: 135 DDCAKALSYFAQALINGNIENYNYF 159
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 28/180 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ +++ G + ++D E+I+TI+ G D +
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTIT---GNVDTI 77
Query: 408 FPAQEALLHIQTRIV-DLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+A I + D+ A +++ IT RL+VP+++ G L G+ GS + E+R +TG
Sbjct: 78 ---NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATG 134
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A+IQ+ S E +P S T+ V I G + DA+V + L E PP T
Sbjct: 135 ASIQVAS-EMLP---SSTERAVTISG----SADAIVLCMQHICHILL------EAPPKGT 180
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 97 NSVPKPP-----ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERA 151
Query: 126 IEIS 129
+ IS
Sbjct: 152 VTIS 155
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
P + V T R+L + G +IGK G IKSIR +GA IN+ + ERI+ I+
Sbjct: 17 PQVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTIT--- 71
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
G + + + +A +I ++ +E+ V +
Sbjct: 72 -----GNVDTIN---KAFSMICNKF------------QEDMQALPNSV-------PKPPI 104
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
R++V G L+GKGG I+++R T I++ LP S +E V + G +
Sbjct: 105 TMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLP---SSTERAVTISGSAD 159
Query: 253 NVKNAVAIISSRLRES 268
+ + I L E+
Sbjct: 160 AIVLCMQHICHILLEA 175
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 28/180 (15%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ +++ G + ++D E+I+TI+ G D +
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTIT---GNVDTI 77
Query: 408 FPAQEALLHIQTRIV-DLGADKDNI----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+A I + D+ A +++ IT RL+VP+++ G L G+ GS + E+R +TG
Sbjct: 78 ---NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATG 134
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A+IQ+ S E +P S T+ V I G + DA+V + L E PP T
Sbjct: 135 ASIQVAS-EMLP---SSTERAVTISG----SADAIVLCMQHICHILL------EAPPKGT 180
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 97 NSVPKPP-----ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERA 151
Query: 126 IEIS 129
+ IS
Sbjct: 152 VTIS 155
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
P + V T R+L + G +IGK G IKSIR +GA IN+ + ERI+ I+
Sbjct: 17 PQVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTIT--- 71
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
G + + + +A +I ++ +E+ V +
Sbjct: 72 -----GNVDTIN---KAFSMICNKF------------QEDMQALPNSV-------PKPPI 104
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
R++V G L+GKGG I+++R T I++
Sbjct: 105 TMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV 139
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEG 138
+I + + G +IGK G IK ++ +GA I V + P R++E++ T
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDA---- 170
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
A LI + + E++ GG G+ G G M +
Sbjct: 171 -------IATAEKLIKEVLAEAESGGN-------------GLVTRRMTGQGGADEFSMKI 210
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VG ++GKGG+ I+ M+ T +I+++P LP + +E +++ G +++A
Sbjct: 211 PNNKVGLIIGKGGETIKSMQATTGARIQVIPLH--LPPGDTSTERTLKIEGTSEQIESAK 268
Query: 259 AIISSRL 265
++ S L
Sbjct: 269 QLVDSIL 275
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 333 AAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE 392
AAPMS + + + ++ P +VG +IG+ ++ LQ + G ++V +D
Sbjct: 99 AAPMS--IPSYSHQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPN 156
Query: 393 QIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL-----------VPSS 441
+ G D + A++ + + + + + + ++T R+ +P++
Sbjct: 157 SPNRLVELTGTSDAIATAEKLIKEV---LAEAESGGNGLVTRRMTGQGGADEFSMKIPNN 213
Query: 442 EIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAAR---D 494
++G + G+ G ++ M+ +TGA IQ++ P S T+ ++I G +I++A+ D
Sbjct: 214 KVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTS-TERTLKIEGTSEQIESAKQLVD 272
Query: 495 ALVEVTTRLR----SYLYRDFFQKETPPSSTGP 523
+++ RLR S Y + PPSS P
Sbjct: 273 SILSGENRLRNPSMSGGYSQQGYQARPPSSWAP 305
>gi|115471839|ref|NP_001059518.1| Os07g0439100 [Oryza sativa Japonica Group]
gi|38175703|dbj|BAC84296.2| unknown protein [Oryza sativa Japonica Group]
gi|50508539|dbj|BAD30838.1| unknown protein [Oryza sativa Japonica Group]
gi|113611054|dbj|BAF21432.1| Os07g0439100 [Oryza sativa Japonica Group]
Length = 233
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 36/239 (15%)
Query: 456 MRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKE 515
M +T ++IL VPAC S + ++QI GE RDAL V +LR++ + +K
Sbjct: 1 MNNTTRTKMKILEETAVPACASQYELVLQITGEPMNVRDALSLVCEKLRNHCFSS--EKT 58
Query: 516 TPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPAT----------SQ 565
T + P+ + + +S +I + + D +Q P ++
Sbjct: 59 TYGNGHVPSSAIDELTTSSQNEIDSVQNSISAFDLGCLGSPQIQKPTIGCGTEINNPINE 118
Query: 566 PSKEAAGSVSETVKQNESERREDVPTVINR-------------VPLPLVTRSTLEVVLPD 612
K A G+ + N + E+ V N + +TR T EV +
Sbjct: 119 VEKPANGNGTGINNLNTGMQNENGIDVSNHGATSLEEKKLLRGIKTATITRITYEVAV-- 176
Query: 613 YAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFI 671
+ T EMSGA V+ PE + +I ISGTP++ AQS L F+
Sbjct: 177 ------CGDNGNDFTMIREMSGADVTAHYPLPETSDGMIVISGTPDE---AQSALAMFL 226
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 217 MRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHF 276
M T+T+++IL + ++P C S E ++Q+ G+ NV++A++++ +LR
Sbjct: 1 MNNTTRTKMKIL-EETAVPACASQYELVLQITGEPMNVRDALSLVCEKLRNHCFSSEKTT 59
Query: 277 HGRLHSP 283
+G H P
Sbjct: 60 YGNGHVP 66
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+N++S N+ + ++ D V TT + D+ AG +IGK G IK IR +GA I
Sbjct: 344 DNSSSWNSYQSGGRASYNDMGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIK 402
Query: 114 VHELIPGDEERIIEISDTR 132
+ E + G E+RII IS T+
Sbjct: 403 IDEPLEGSEDRIITISGTQ 421
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGA-APMSDSVQPFYGEDLVFRMLCPIDKVGRVIGE 365
G R+ G N Y S S ++G A +D P + ++ P D G +IG+
Sbjct: 331 GDRY-GDNMGGGGYDNSSSWNSYQSGGRASYNDMGGPV----ITTQVTIPKDLAGSIIGK 385
Query: 366 SEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL----LHI 417
++ +++E G +K+ +P++GS+++IITIS G D++ AQ L LH+
Sbjct: 386 GGQRIKQIRHESGASIKIDEPLEGSEDRIITIS---GTQDQIQNAQYLLQNSALHL 438
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 33/195 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRR 134
T ++IL + AG +IGK G I +++ GA + + ++ PG ER+ I+ +
Sbjct: 37 TFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS--- 93
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
E + IH+ I+E +E+ + + +
Sbjct: 94 ------------VEGVLRIHEFIMEKI-------KEKPDPTAKIAIDFDHKQPAEREKQV 134
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI--LPRDHSLPRCVSMSEEIVQVVGDIN 252
+++V G ++GKGG I+Q++ E+ ++I +DH+L +E + V+G+++
Sbjct: 135 KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHAL------AERCITVIGEMD 188
Query: 253 NVKNAVAIISSRLRE 267
N K A +I +++ E
Sbjct: 189 NNKKACQLILAKIVE 203
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 40/204 (19%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVD---GSDEQIITISSEEGPDDE 406
F++L P G +IG+ + LLQ E G +K++ D G+ E++ I+
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITG------- 92
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIIT-----------------TRLLVPSSEIGCLEGR 449
+ E +L I I++ +K + ++LVP+S G + G+
Sbjct: 93 ---SVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 450 DGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL----- 503
GS + +++ +GA +QI + + A + + ++GE+ + A + ++
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHAL---AERCITVIGEMDNNKKACQLILAKIVEDPQ 206
Query: 504 -RSYLYRDFFQKETPPSSTGPTGS 526
S L+ + + P ++ PTGS
Sbjct: 207 SGSCLHVSYAEVTGPVANFNPTGS 230
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 49/332 (14%)
Query: 354 CPIDK-------VGRVIGESEGIVELLQNEIGVDLKVADPVDGS-DEQIITISSEEGPDD 405
C IDK GR+IG+ ++ + + + ++D GS E+I+T++ GP D
Sbjct: 45 CFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINISD---GSLPERIVTVN---GPID 98
Query: 406 ELFPAQEAL---LHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTG 461
+ A + + L RI++ + + I LL+P + G+ G ++ E+R STG
Sbjct: 99 AVCKAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTG 158
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A + I S + +D ++ I G A + ++ L + P +
Sbjct: 159 AQVSIASN----VLPNSSDRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQPKPPNV 214
Query: 522 GPTG------SALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVS 575
PT L P I P Q PP +P +Q + + +
Sbjct: 215 PPTAFQNGQVHELTFAVPGPFPIPP--HAQLPYGPP--------VPVITQIAPYSV-DIP 263
Query: 576 ETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGA 635
V QN S RST + +P + +I + + ++SGA
Sbjct: 264 SIVTQNFSAMSNG----------GTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGA 313
Query: 636 SVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
++ + + T + + ISGTPE + AQ ++
Sbjct: 314 NIKIASPNGDTTGRQVTISGTPESISAAQYLI 345
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+ R L A +IGKSG I IR + A +N+ E+IPG+ ERI+ +S G
Sbjct: 114 SMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS--------GP 165
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + S +A LI RI +E + G V R +V
Sbjct: 166 LDAVS---KAFGLIVRRI------------NDEPFDQPS-------VPGSKSVTIRFIVP 203
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++GK G I++ ++ + R+ + LP +E ++ + G + V AV
Sbjct: 204 NSRMGSVIGKQGSKIKE--IQEASGARLTAGEAMLPGS---TERVLSISGVADAVHIAVY 258
Query: 260 IISSRLRESQHRDRSHFHGR 279
+ + L E Q R+ ++ R
Sbjct: 259 YVGTILLEHQDRNANNLPYR 278
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 65 RANSNPKD-PSL--MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPG 120
R N P D PS+ + T R + + + G VIGK GS IK I++ +GA + E ++PG
Sbjct: 179 RINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPG 238
Query: 121 DEERIIEIS 129
ER++ IS
Sbjct: 239 STERVLSIS 247
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VGC++GKGG I ++R + + I+I+ + S +E +V + G N++ AV+++
Sbjct: 341 VGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLY 400
Query: 263 SRLRESQHR 271
RL + + R
Sbjct: 401 QRLEQEKMR 409
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+ R L +IG+S + ++++ L +++ + G+ E+I+T+S GP D +
Sbjct: 113 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS---GPLDAV 169
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+A I RI D D+ ++ +T R +VP+S +G + G+ GS + E++ ++G
Sbjct: 170 ---SKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASG 226
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A + +P T+ ++ I G A A+ V T L + R+ P++
Sbjct: 227 ARL-TAGEAMLPGS---TERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLPYRPTAG 282
Query: 522 GPT 524
GP+
Sbjct: 283 GPS 285
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 81/385 (21%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC-VSMSEEIVQVVGD 250
+ +++ S ++G L+GK G+ ++++ ET T+I I SL + +E + V G
Sbjct: 340 IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITI----SSLQDLNIYNNERTITVKGS 395
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTAR--------- 301
+ NA I +LRE+ D + + + +P +N A
Sbjct: 396 LEACCNAEVEIMKKLREAYENDVAAINQQ----------TSLIPGLNLNALGIFSSALPV 445
Query: 302 RPSMDGAR-------------FSG-SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGED 347
PS G R F G S++ S+ YG P A A P + Q E
Sbjct: 446 LPSAAGPRSTMPPVGPAGYNPFIGHSSHPSSLYGVPP------ASAIPHQHAAQ----EQ 495
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDD 405
V + P VG +IG+ ++ L + G +K+A P + D E+++ I+ G +
Sbjct: 496 EVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIA-PAEKPDATERMVIIT---GTPE 551
Query: 406 ELFPAQEALLHIQTRIVDLGADKDNI-ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
F AQ + + + ++ K+ + + T + VPS+ G + G+ G +++E++ T A
Sbjct: 552 AQFKAQGRIFG-KLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAE 610
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
+ I+ R++ P D EV ++ + + +K+ S P
Sbjct: 611 V-IVPRDQTP--------------------DEKNEVVVKICGHFFASQVRKKKKNPSLRP 649
Query: 524 TGSALVVEAASPIDITPAREVQTVT 548
LVV + + + P QT+T
Sbjct: 650 HKQLLVVNSPT---VKPTERKQTLT 671
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 23/242 (9%)
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
I +++ ++ IG L G+ G +L ++ TG I I S +++ + + + + G ++
Sbjct: 340 IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDL--NIYNNERTITVKGSLE 397
Query: 491 AARDALVEVTTRLRSYLYRDFFQKETPPSST-GPTGSALVVEAASPIDITPAREVQTVTD 549
A +A VE+ +LR D S G +AL + +S + + P+ T
Sbjct: 398 ACCNAEVEIMKKLREAYENDVAAINQQTSLIPGLNLNALGI-FSSALPVLPSAAGPRSTM 456
Query: 550 PPAA-THQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEV 608
PP + I +S PS + + + + ++V +
Sbjct: 457 PPVGPAGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAYLF--------------- 501
Query: 609 VLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQ-PEGTQKIIQISGTPEQVERAQSVL 667
+P AV LI K + + + +GAS+ + + P+ T++++ I+GTPE +AQ +
Sbjct: 502 -IPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKAQGRI 560
Query: 668 QG 669
G
Sbjct: 561 FG 562
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 45/205 (21%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEGR 139
+L G VIGK G +IK I+ +GA + E PGD + ++ G+
Sbjct: 302 VLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLS----------GK 351
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR-------- 191
+ A++ + + D ++ D G G G G G G GF GGNR
Sbjct: 352 HQAVEQARQRIQELIDSVMRRDDGRNNMG------GRGSGPRGNGF--GGNRNPNEYGTW 403
Query: 192 -----------VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM 240
+ T V G ++GKGG+ I+Q+ +T + R+ S +
Sbjct: 404 DRRQGGPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQS-----NE 458
Query: 241 SEEIVQVVGDINNVKNAVAIISSRL 265
+E+I + G+ V++A I S +L
Sbjct: 459 NEKIFIIRGNPEQVEHAKRIFSEKL 483
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
TTT + D+ AG +IGK GS I IR+ +GA I + E +PG +RII I T P
Sbjct: 354 FTTTQVTIPKDL-AGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGT----P 408
Query: 137 EGRMPSFSPAQEALFLIHDRILES 160
E Q A +L+ +R+ S
Sbjct: 409 E-------QIQNAQYLLQNRVRAS 425
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
R+L H +AG +IG++G IK +R+ TGA I V+ E+ P ER+++++
Sbjct: 129 RMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSEVCPNSTERVVQMN 177
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 604 STLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERA 663
+T +V +P +I K + + + E SGA + + E P +II I GTPEQ++ A
Sbjct: 355 TTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGTPEQIQNA 414
Query: 664 QSVLQGFILSTQ 675
Q +LQ + ++Q
Sbjct: 415 QYLLQNRVRASQ 426
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R+L G +IG+ + L+ + + V D E+I+T+++ +
Sbjct: 45 GPKVDLRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDC--SGPERILTVTTNQETA 102
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
+L + DL D + R+LV S+ G + GR G + E+R TGAN
Sbjct: 103 LSCLLDVIPVLEEYQQYKDLDFDCE----MRMLVHQSQAGAIIGRAGFKIKELREQTGAN 158
Query: 464 IQILSREEVPACVSGTDELVQIVG 487
I++ S C + T+ +VQ+ G
Sbjct: 159 IKVYSE----VCPNSTERVVQMNG 178
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 305 MDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIG 364
MD + SGSN R + R G AP G + R L G +IG
Sbjct: 1 MDHSDGSGSNKRESTDDGRADG------EAPSKRPRNTGGGRAVDVRFLLQSRNAGAIIG 54
Query: 365 ESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVD- 423
+ + L+ E + V D E+I++I ++ L E LL+I ++ D
Sbjct: 55 KGGSNINSLRKEFKASISVPDCP--GPERILSIVAD------LDTLGEILLNIIPKLDDR 106
Query: 424 -------LGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPAC 475
G + + RLL+ S GC+ GR G + E+R STGANI++ C
Sbjct: 107 SMQFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGS----CC 162
Query: 476 VSGTDELVQIVGEIQAARDALVEVT 500
T+ +V++ G D + ++
Sbjct: 163 PGSTERIVKVTGSPSVVVDCIKQIC 187
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDT 131
+ R+L H AG +IG++G IK +R+ TGA I VH PG ERI++++ +
Sbjct: 122 SEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGS 175
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 68/395 (17%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I+VH + G E+ I I T PEG
Sbjct: 203 RLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHST----PEG-- 256
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ + L ++H ++ + V +++
Sbjct: 257 -CSAACRMILDIMHQEAKDTKTA--------------------------DEVPLKIMAHN 289
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I P +D +L E + V G I A
Sbjct: 290 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACCQAEV 345
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RE+ D + + + H +P +N A + N
Sbjct: 346 EIMKKVREAYENDIAAMNQQTH----------LIPGLNLGALG-LFPSSSNMPPPPPGNA 394
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
G P G AP ++V + P VG +IG+ ++ L G
Sbjct: 395 VGGTPYG----CFGAPEQETVHVY----------IPAQAVGAIIGKKGQHIKQLSRFAGA 440
Query: 380 DLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVP 439
+K+A P + D ++ + GP + F AQ + G ++ + T + +
Sbjct: 441 SIKIA-PAESPDSKMRMVIV-TGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMA 498
Query: 440 SSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVP 473
++ G + G+ G +++E++ T A + ++ RE+ P
Sbjct: 499 AAAAGRVIGKGGKTVNELQNLTAAEV-VVPREQTP 532
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRR 134
+TT RI K G +IGK G +++ ++ ++GA I + E P R +EI T
Sbjct: 231 STTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGT--- 287
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
S ++A LI+ I E + GG V RG ++
Sbjct: 288 --------VSCIEKAEKLINAVIAEVEAGG---------------VPALAARGVPEQMEI 324
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
++ + VG ++G+GG+ I+ M+ +++ +I+++P++ + E V++ GD +
Sbjct: 325 KVPSDK--VGVIIGRGGETIKNMQTKSRARIQLIPQNEGD----ASKERTVRISGDKRQI 378
Query: 255 KNAVAII 261
A A+I
Sbjct: 379 DIATALI 385
>gi|45361433|ref|NP_989293.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|39794540|gb|AAH63902.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 653
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 178 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKE 237
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 238 M--------VLELIRDQ-------GGFR-EIRNEYGS---------RIGGNE-GIDVPIP 271
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D S P E I Q+ G + ++A
Sbjct: 272 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTP------ERIAQITGPQDRCQHAAE 325
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 326 IINDLLRSVQ 335
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 29/183 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELI---PGDEERIIEISDTRRRDPEG 138
+I + + G +IGK G IK ++ +GA I + I P R +E+ T PE
Sbjct: 87 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGT----PE- 141
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ S A++ LI++ + E++ GG G+ F G M +
Sbjct: 142 ---AISSAEK---LINEVLAEAESGGS-------------GIVTRRFTGQAGSDEFVMKI 182
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VG ++GKGG+ I+ M+ T +I+++P LP + +E +++ G +++A
Sbjct: 183 PNNKVGLIIGKGGETIKNMQASTGARIQVIPLH--LPPGDTSTERTLKIDGTPEQIESAK 240
Query: 259 AII 261
++
Sbjct: 241 QLV 243
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 23/166 (13%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-----ADP--------VDGSDEQIITI 397
++ P +VG +IG+ ++ LQ + G +++ ADP + G+ E I
Sbjct: 87 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAI--S 144
Query: 398 SSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEM 456
S+E+ ++ L A+ I TR A D + + +P++++G + G+ G ++ M
Sbjct: 145 SAEKLINEVLAEAESGGSGIVTRRFTGQAGSDEFV---MKIPNNKVGLIIGKGGETIKNM 201
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEV 499
+ STGA IQ++ P S T+ ++I G +I++A+ + +V
Sbjct: 202 QASTGARIQVIPLHLPPGDTS-TERTLKIDGTPEQIESAKQLVYQV 246
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ + + E G + +++ E+IIT++ GP + +
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISE--GNCPERIITLT---GPTNAI 68
Query: 408 FPAQEALLH-----IQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F A ++ I + + + A +T RL+VP+ + G L G+ G + E+R STG
Sbjct: 69 FKAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTG 128
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYL 507
A +Q+ + + +P + T+ + I G Q+ + + ++ + L
Sbjct: 129 AQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETL 170
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 32/114 (28%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN+S + + + P T R++ + G +IGK G IK IR+ TGA + V ++
Sbjct: 83 INSSMTNSTAASRPP-----VTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQVAGDM 137
Query: 118 IPGDEERIIEIS------------------DTRRRDPEGR--------MPSFSP 145
+P ER I I+ +T + P+GR MP+ SP
Sbjct: 138 LPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP 191
>gi|395730346|ref|XP_002810731.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Pongo abelii]
Length = 667
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 248
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 249 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
+ R L A +IGKSG I IR + A +N+ E+IPG+ ERI+ +S G
Sbjct: 141 SMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS--------GP 192
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ + S +A LI RI +E + G V R +V
Sbjct: 193 LDAVS---KAFGLIVRRI------------NDEPFDQPS-------VPGSKSVTIRFIVP 230
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++GK G I++ ++ + R+ + LP +E ++ + G + V AV
Sbjct: 231 NSRMGSVIGKQGSKIKE--IQEASGARLTAGEAMLPGS---TERVLSISGVADAVHIAVY 285
Query: 260 IISSRLRESQHRDRSHFHGR 279
+ + L E Q R+ ++ R
Sbjct: 286 YVGTILLEHQDRNANNLAYR 305
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VGC++GKGG I ++R + +QI+I+ + +E +V + G N++ AV+++
Sbjct: 371 VGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNIQMAVSLLY 430
Query: 263 SRLRESQHR 271
RL + + R
Sbjct: 431 QRLEQEKMR 439
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 65 RANSNPKD-PSL--MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPG 120
R N P D PS+ + T R + + + G VIGK GS IK I++ +GA + E ++PG
Sbjct: 206 RINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPG 265
Query: 121 DEERIIEIS 129
ER++ IS
Sbjct: 266 STERVLSIS 274
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+ R L +IG+S + ++++ L +++ + G+ E+I+T+S GP D +
Sbjct: 140 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS---GPLDAV 196
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+A I RI D D+ ++ +T R +VP+S +G + G+ GS + E++ ++G
Sbjct: 197 ---SKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASG 253
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSST 521
A + +P T+ ++ I G A A+ V T L + R+ P++
Sbjct: 254 ARL-TAGEAMLPGS---TERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLAYRPTAG 309
Query: 522 GPT 524
GP+
Sbjct: 310 GPS 312
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 46/326 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 213 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 263
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+A ++ +LE G +G GG + R+++S
Sbjct: 264 --PLQGTSKAYSIVAKSLLE----------------GAPQMGMGGVVQNNGTHSVRLLIS 305
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 306 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 360
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R L++P + T PS G+ S S R+ N
Sbjct: 361 EIGKCLIDDWQRGTGTV---LYNPAVRASVGSGSGQGSVTGTNPSYGGS--SRSYNRTGN 415
Query: 320 ---YGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVEL 372
+ PS YS G + P ED + P D VG +IG +
Sbjct: 416 GADFSDHPSSYS-RRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISE 474
Query: 373 LQNEIGVDLKVAD-PVDGSDEQIITI 397
++ G + +A P D + E++ TI
Sbjct: 475 IRRSSGARISIAKAPHDDTGERMFTI 500
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR G+ +SE+RRS+GA I I + P +G + + I
Sbjct: 445 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISI---AKAPHDDTG-ERMFTI 500
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G QA AL + L + R Q+
Sbjct: 501 MGSAQANEKALYLLYENLEAEKMRRSQQQ 529
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ ++ E G + ++D E+I+TI+ G +
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 129
Query: 408 F-----PAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F +E +L + + IT R++VP+++ G L G+ GS + ++R +TG
Sbjct: 130 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 183
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
A+IQ+ S E +P T+ V + G A + +V L
Sbjct: 184 ASIQVAS-EMLP---HSTERAVTLSGTADAINLCMTQVCQIL 221
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 146 NSVPKPP-----ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERA 200
Query: 126 IEISDT 131
+ +S T
Sbjct: 201 VTLSGT 206
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 43/202 (21%)
Query: 44 NNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKS 103
N + ++++++ + +S S + ++P SL++T R+L + G +IGK G IK
Sbjct: 42 NGSTSSDHLLGDPSS---SCSPRETSPSTTSLVLTI--RLLMQGKEVGSIIGKKGDQIKK 96
Query: 104 IRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGG 163
IR+ +GA IN+ + ERI+ I+ T + + +E + L+ + + +
Sbjct: 97 IREESGAKINISD--GSCPERIVTITGTLGVIGKAFNMVCNKFEEDMLLLPNSVPKPP-- 152
Query: 164 GGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
+ R++V G L+GKGG I+ +R T
Sbjct: 153 ----------------------------ITMRVIVPATQCGSLIGKGGSKIKDIREATGA 184
Query: 224 QIRI----LPRDHSLPRCVSMS 241
I++ LP HS R V++S
Sbjct: 185 SIQVASEMLP--HSTERAVTLS 204
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 250 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 283
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 337
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 338 IITDLLRSVQ 347
>gi|119626762|gb|EAX06357.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 654
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 248
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 249 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 35/199 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRD 135
++ +I + + G +IGK G IK ++ +GA I V + P + R++E+ T
Sbjct: 86 SSKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT---- 141
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P+ + S A++ LI++ + E++ G GGG + GG+
Sbjct: 142 PD----AVSSAEK---LINEVLAEAEAGAS-----------GGGTRRMVAQSGGDEFV-- 181
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M + VG ++GKGG+ I+ M+ T +I+++P H P S +E +++ G + ++
Sbjct: 182 MQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPL-HPPPGDTS-TERTLKIDGTPDQIE 239
Query: 256 NAVAIIS------SRLRES 268
+A +++ +RLR S
Sbjct: 240 SAKQLVNQILTGENRLRNS 258
>gi|296808217|ref|XP_002844447.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
gi|238843930|gb|EEQ33592.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
Length = 570
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
+I+ D G VIG+SG ++ + + +G IN+ D E I + P
Sbjct: 288 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIAR----DGESINGLR------PVTLTG 337
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
S Q A LI I+ESD G G+ E GGG GG+++ ++ + +
Sbjct: 338 SQQAMQRAKELIVG-IVESDNRPGNQGQREPRGQAMSADNGGG---GGDKLNDKIFIPKE 393
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILP 229
VG ++GKGG+ I +++ + +I ILP
Sbjct: 394 AVGMVIGKGGETIRELQSFSGCKINILP 421
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 191 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 250
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 251 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 284
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 285 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 338
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 339 IITDLLRSVQ 348
>gi|307110043|gb|EFN58280.1| hypothetical protein CHLNCDRAFT_142255 [Chlorella variabilis]
Length = 306
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 311 SGSNYRSNNYGPRPSGYSIEAG----AAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
+G+ + +Y +GY+ +A A P++ + P + V+R++ + +IG
Sbjct: 66 AGAPAVAGSYQGTAAGYATDAKRQHVAPPLTPASVP---RETVYRLVLDVVDTALIIGRG 122
Query: 367 EGIVELLQNEIGVDLKVADPVDGSDEQIITI--SSEEGPDDELFP---AQEALLHIQTRI 421
V ++ G +K G+ EQ++ + S+ E P AQEAL+ R+
Sbjct: 123 GNTVRQIEQTTGGRVKRLQEPPGAREQVVVVWNSARELPSPGRMARNTAQEALVDCVRRV 182
Query: 422 V-DLGADKDNIITTRLLVP-SSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGT 479
V A ++ RLL+ + E G ++ + ++E + G +I++ +E+PAC
Sbjct: 183 VFQENAPMGQPMSARLLISRTQEAGVMDNMNAIVAE---NPGISIELKRAQELPACALDN 239
Query: 480 DELVQIVGE---IQAARDALVEV 499
D LV++ GE + AA +AL V
Sbjct: 240 DVLVELSGEKYSLLAAVEALSHV 262
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 81 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRM 140
YR+L +AG +IG++G +I SIR T + L PG ERI+ +S + D +
Sbjct: 126 YRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERILTVSG-KLDDSAKAL 184
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGE-EEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
F+ A + D +E Y ++ V G R+++
Sbjct: 185 SYFAQA------LCDSAIE------LYNYFPLKQLSSTPCV-------EGETTIIRLLIP 225
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G L+G G I+Q++ + ++ LP +E +V++ G ++++ +++
Sbjct: 226 NSQMGTLIGSKGARIQQIQQSFG--VSMIASKLFLP---GSNERLVELQGTVDDLYDSLR 280
Query: 260 IISSRLRE---------SQHRDRSHFHGRLHSPDRFFPDD 290
+IS L E + + RSH R + FP+D
Sbjct: 281 VISRCLIEDFSSSVGTTTYYVPRSHQMTRKSTATINFPND 320
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 422 VDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRS---TGANIQILS--REEVPACV 476
+D ++ D +I R+LV + E GCL G++G + + R+ T A I L+ E V
Sbjct: 114 LDDKSNADALINYRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERILTV 173
Query: 477 SGT--DELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAAS 534
SG D + QA D+ +E+ Y Y Q + P G T +
Sbjct: 174 SGKLDDSAKALSYFAQALCDSAIEL------YNYFPLKQLSSTPCVEGETTIIRL----- 222
Query: 535 PIDITPAREVQTVTDPPAATHQSVQ-------------IPATSQPSKEAAGSVSETVKQN 581
+ P ++ T+ A Q +Q +P +++ E G+V +
Sbjct: 223 ---LIPNSQMGTLIGSKGARIQQIQQSFGVSMIASKLFLPGSNERLVELQGTVDDLYDSL 279
Query: 582 ESERR---ED----VPTVINRVPLP--LVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEM 632
R ED V T VP + +ST + P+ V LI K+ + + ++
Sbjct: 280 RVISRCLIEDFSSSVGTTTYYVPRSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVRKV 339
Query: 633 SGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVL 667
SGA + + E + +++ I+GT + VE+A+ +L
Sbjct: 340 SGAMIGISEAEDGSDERVFTITGTQQAVEKAKGLL 374
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV--HELIPGDEERIIEISDTRRRDPEGR 139
+IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP+
Sbjct: 167 QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITG----DPQ-- 220
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
Q+A L+ I + D G G + G + GG+ + +VV
Sbjct: 221 -----KVQQARELVVKLIRDKDQGDFRVGRADF-----------GSKMGGSTL--DVVVP 262
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I +++ + +I+ D P E + QV+G +++ +AV
Sbjct: 263 RFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISP------ERVAQVMGQLDHCHHAVH 316
Query: 260 IISSRLRESQHRD 272
II+ ++ +Q RD
Sbjct: 317 IINELVQTAQERD 329
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 248
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 249 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ ++ E G + ++D E+I+TI+ G +
Sbjct: 73 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 130
Query: 408 F-----PAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F +E +L + + IT R++VP+++ G L G+ GS + ++R +TG
Sbjct: 131 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 184
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
A+IQ+ S E +P T+ V + G A + +V L
Sbjct: 185 ASIQVAS-EMLP---HSTERAVTLSGTADAINLCMTQVCQIL 222
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 147 NSVPKPP-----ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERA 201
Query: 126 IEISDT 131
+ +S T
Sbjct: 202 VTLSGT 207
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 40/178 (22%)
Query: 68 SNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 127
++P SL++T R+L + G +IGK G IK IR+ +GA IN+ + ERI+
Sbjct: 64 TSPSTTSLVLTI--RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVT 119
Query: 128 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRG 187
I+ T + + +E + L+ + + +
Sbjct: 120 ITGTLGVIGKAFNMVCNKFEEDMLLLPNSVPKPP-------------------------- 153
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS 241
+ R++V G L+GKGG I+ +R T I++ LP HS R V++S
Sbjct: 154 ----ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLP--HSTERAVTLS 205
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR--RDPEGRMPSFSPA 146
KAG +IGK G IK +++ G V ++ D + + R DP
Sbjct: 191 KAGLIIGKGGETIKQLQERAG----VKMILIQDGSQPPNVDKPLRIIGDP-------YKV 239
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
Q+A ++++ + E D G +G+ E G +GGGG + V R VG +
Sbjct: 240 QQAKEMVNEILRERDHAG--FGDRSEY---GSRMGGGGI---------EIPVPRQSVGVV 285
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
+G+ G++I++++ + +I+ P D + P E+I ++G + ++AV+II+ L+
Sbjct: 286 IGRNGEMIKKIQNDAGVKIQFKPDDGTAP------EKIAHIMGPPDQCQHAVSIINDLLQ 339
Query: 267 ESQHRD 272
+ RD
Sbjct: 340 SIRARD 345
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
M++ G ++GKGG+ I+Q++ ++ IL +D S P V ++ ++++GD V+
Sbjct: 185 MIIPAGKAGLIIGKGGETIKQLQERAGVKM-ILIQDGSQPPNV---DKPLRIIGDPYKVQ 240
Query: 256 NAVAIISSRLRESQHR---DRSHFHGRL 280
A +++ LRE H DRS + R+
Sbjct: 241 QAKEMVNEILRERDHAGFGDRSEYGSRM 268
>gi|380479025|emb|CCF43264.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 384
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 140/365 (38%), Gaps = 73/365 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ I+ G
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTIT--------GG 100
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S S EA ++ +LE G +G GG ++++S
Sbjct: 101 CQSVS---EAYSIVARALLE----------------GAPSLGMGGVVQNNGTHPIKLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G +K AV
Sbjct: 142 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIKGAVW 196
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R L++P V T A FS RSN+
Sbjct: 197 EICKCLVDDWQRGTGTV---LYNP--------AVRTQPGTTSTTGGSTATFSSGGGRSND 245
Query: 320 YGP---------------------------RPSGYSIEAGAAPMSDSVQPFYGEDLVFRM 352
Y RP G ++ AA GE+L +
Sbjct: 246 YSAPRVMRTGNGADFSTNSNSNNGGGGGGGRPYGRRSDSDAASRGPPTHDENGEELQTQN 305
Query: 353 LC-PIDKVGRVIGESEGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFP 409
+ P D VG +IG + + ++ G + +A P D + E++ TI + + + LF
Sbjct: 306 ISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGTAKANESALFL 365
Query: 410 AQEAL 414
E L
Sbjct: 366 LYENL 370
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 211 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 270
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 271 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 304
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 305 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 358
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 359 IITDLLRSVQ 368
>gi|89272465|emb|CAJ82621.1| fubp1 [Xenopus (Silurana) tropicalis]
Length = 653
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 178 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKE 237
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 238 M--------VLELIRDQ-------GGFR-EIRNEYGS---------RIGGNE-GIDVPIP 271
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D S P E I Q+ G + ++A
Sbjct: 272 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTP------ERIAQITGPQHRCQHAAE 325
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 326 IINDLLRSVQ 335
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 250 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 283
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 337
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 338 IITDLLRSVQ 347
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 248
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 249 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|226470354|emb|CAX70457.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 370
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
G + R L G +IG+ ++ ++ E V KV P E+++ + + G
Sbjct: 6 GPKVELRFLISTKAAGVIIGKGGENIKKIREEYSV--KVTIPDSNGPERVLVLDGDLGSI 63
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
E+F +E L +Q ++D + RLLV S+ GC+ GR G + E+R +G
Sbjct: 64 IEIF--RENLEKMQN-------NRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSG-- 112
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ L ++ C S TD ++Q+VG++ + L + L
Sbjct: 113 LHTLKVYQM-LCPSSTDRVIQLVGDVGKVLNCLQSIAELL 151
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 594 NRVPLPLVTRST-LEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQ 652
NR+ + L+T +T +V + + + ++ +S + + S A + + + +P +II
Sbjct: 285 NRMAMSLLTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKLEPGVEDRIIT 344
Query: 653 ISGTPEQVERAQSVLQ 668
I+GTPEQ++ AQ +LQ
Sbjct: 345 ITGTPEQIQNAQFLLQ 360
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 51/223 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ERIIEIS---DTRRRDP 136
R+L AG VIGK G IK +R A + IP + ERI+ I D R
Sbjct: 108 RLLVPSRGAGAVIGKGGESIKRLRAECDATLT----IPDSQTPERIVTIVAEIDNVIRCV 163
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+P E L + +SD G GE E R+
Sbjct: 164 NEIIPRLD---ECL-----KTRDSDDEGSARGESE----------------------LRL 193
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V + H G ++G+GG I+++R ET TQ+++ + C +E ++Q++G +
Sbjct: 194 LVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQC-----CPQSTERVIQIIGVPEKIIA 248
Query: 257 AVAIISSRLRESQHRDRSH-FHGRLHSPDR------FFPDDDY 292
V +I + L+E + S + + P+ F PD +Y
Sbjct: 249 CVILIINMLKEIPIKGPSRPYESMFYDPNFVHEYGGFPPDRNY 291
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 248
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 249 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
T+ +I + + G +IGK G IK ++ +GA I V + D S TR + G
Sbjct: 97 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPN-----SPTRLVELMG 151
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
+ A++ LI+D + E++ GG G+ G M V
Sbjct: 152 TPDQIAKAEQ---LINDVLSEAEAGGS-------------GIVSRRLTGQAGSEQFVMKV 195
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VG ++GKGG+ I+ M+ T +I+++P H P SM E VQ+ G +++A
Sbjct: 196 PNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSM-ERTVQIDGTSEQIESAK 253
Query: 259 AIISSRLRE 267
+++ + E
Sbjct: 254 QLVNEVISE 262
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 53/328 (16%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
D +ML P VG +IG+ V + LK + + EGP +
Sbjct: 37 DTPLKMLVPASVVGAIIGKGGSTVRQI-----TQLK-------DSRARVDVHRREGPGSD 84
Query: 407 ----LFPAQEALLHIQTRIVDL--GADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRS 459
++ A EA RI+++ +KDN + ++L ++ IG L GRDG +L ++
Sbjct: 85 KVATIYGAPEACGAAAIRILEIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDK 144
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPS 519
TG I I S E+ D + I GE++ +A ++T +LR F+ +
Sbjct: 145 TGTRIAISSMHELSPY--NMDRTISIHGEVKGISEAEQQITEKLRQ------FETDMAAM 196
Query: 520 STGPTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVK 579
S L + + + P +Q+ T PPA S +VS++V
Sbjct: 197 SQQSLYPGL---NSQQMQMFPG--LQSPTAPPAYN--------VSYQGSYFFKNVSQSVF 243
Query: 580 QNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSL 639
+ + + T+ T+ +++P AV +I T + S ++GAS+ +
Sbjct: 244 FSGNSSSNN-------------TQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRI 290
Query: 640 VEGQPEGTQKIIQISGTPEQVERAQSVL 667
+ + I G PE +AQ +
Sbjct: 291 HVNADRDAKARVTIVGVPESQWKAQFCI 318
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 59/232 (25%)
Query: 27 PRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCH 86
P YN YQ + ++ N + + + N+S NN+ T +L
Sbjct: 223 PAYNVSYQGSYFFK-----NVSQSVFFSGNSSSNNTQE---------------TVTLLIP 262
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
G +IG G+ I++I + GA I +H D + + I PE +
Sbjct: 263 SGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGV----PESQW------ 312
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
+A F I D++ + G++G EE R+ T++ + VG +
Sbjct: 313 -KAQFCIFDKLKQE----GWFGNEE------------------GRLTTQITIPGKLVGRI 349
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI-VQVVGDINNVKNA 257
+GKGG + +++ T +++ I PR L + SEEI V + G + ++A
Sbjct: 350 IGKGGVNVRELQRITSSEVTI-PRQGEL----NTSEEIPVSITGTFFSNQSA 396
>gi|410033139|ref|XP_003949493.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|426330100|ref|XP_004026062.1| PREDICTED: far upstream element-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 655
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 250 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 283
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 337
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 338 IITDLLRSVQ 347
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R+L +VG +IG+ ++ ++ E G + ++D E+I+TI+ G +
Sbjct: 76 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 133
Query: 408 F-----PAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
F +E +L + + IT R++VP+++ G L G+ GS + ++R +TG
Sbjct: 134 FNMVCNKFEEDMLLLPNSV------PKPPITMRVIVPATQCGSLIGKGGSKIKDIREATG 187
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
A+IQ+ S E +P T+ V + G A + +V L
Sbjct: 188 ASIQVAS-EMLP---HSTERAVTLSGTADAINLCMTQVCQIL 225
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERI 125
NS PK P T R++ + G +IGK GS IK IR+ TGA I V E++P ER
Sbjct: 150 NSVPKPP-----ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERA 204
Query: 126 IEISDT 131
+ +S T
Sbjct: 205 VTLSGT 210
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 38/166 (22%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R+L + G +IGK G IK IR+ +GA IN+ + ERI+ I+ T +
Sbjct: 77 TIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKAF 134
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ +E + L+ + + + + R++V
Sbjct: 135 NMVCNKFEEDMLLLPNSVPKPP------------------------------ITMRVIVP 164
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRI----LPRDHSLPRCVSMS 241
G L+GKGG I+ +R T I++ LP HS R V++S
Sbjct: 165 ATQCGSLIGKGGSKIKDIREATGASIQVASEMLP--HSTERAVTLS 208
>gi|62088312|dbj|BAD92603.1| far upstream element-binding protein variant [Homo sapiens]
Length = 493
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 40 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 100 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 133
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 134 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 187
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 188 IITDLLRSVQ 197
>gi|119626763|gb|EAX06358.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Homo
sapiens]
Length = 656
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 250 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 283
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 284 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 337
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 338 IITDLLRSVQ 347
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D+ R+L P G +IG+ + L+ + + V D G + + ISS +
Sbjct: 21 DDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPERILTIISSNDN--- 76
Query: 406 ELFPAQEALLHIQTRIVDLGA-----------------DKDNIITTRLLVPSSEIGCLEG 448
A + L + + D G+ + + R+LV S+ GC+ G
Sbjct: 77 ----ALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIG 132
Query: 449 RDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
+ G + E+R TG+ I+I + C TD +VQI G+ D + EV L++
Sbjct: 133 KGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLKT 186
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
AG +IGK+G+ I+ IRQ +GA I + E G +ERII I+ T
Sbjct: 356 AGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGT 397
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGD 250
V RM+V + GC++GKGG ++++R +T ++I+I C MS + +VQ+ G
Sbjct: 116 VDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKI------YTSCCPMSTDRVVQITGK 169
Query: 251 INNVKNAVAIISSRLRES 268
N + V + L+ +
Sbjct: 170 PNTCSDCVREVLDLLKTA 187
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 33/186 (17%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR--RDPEGRMPSFSPA 146
KAG +IGK G IK +++ G V ++ D + I R DP
Sbjct: 191 KAGLIIGKGGETIKQLQERAG----VKMILIQDASQPPNIDKPLRIIGDP-------YKV 239
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
Q+A ++++ + E D G +GE E G +GGGG + V R VG +
Sbjct: 240 QQAKEMVNEILQERDHQG--FGERNEY---GSRMGGGGI---------EVTVPRHSVGVV 285
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
+G+ G++I++++ + +I+ P D + P ++I ++G + ++A +II+ L+
Sbjct: 286 IGRSGEMIKKIQSDAGVKIQFKPDDGTGP------DKIAHIMGPPDQCQHAASIITDLLQ 339
Query: 267 ESQHRD 272
+ R+
Sbjct: 340 SIRARE 345
>gi|147898765|ref|NP_001090218.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|47718038|gb|AAH70981.1| MGC78835 protein [Xenopus laevis]
gi|213626654|gb|AAI69815.1| Hypothetical protein MGC78835 [Xenopus laevis]
Length = 653
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDPEGRM 140
I+ KAG VIGK G IK +++ G + + + P + ++ + I+ +
Sbjct: 178 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYK------ 231
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
Q+A ++ + I + GGF E EYG R GGN + + R
Sbjct: 232 -----VQQAKEMVLELICDQ---GGFR-EVRNEYGS---------RIGGNE-GIDVPIPR 272
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG ++G+ G++I++++ + +I+ P D S P E + Q+ G + ++A I
Sbjct: 273 FAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTP------ERVAQITGPQDRCQHAAEI 326
Query: 261 ISSRLRESQ 269
++ LR Q
Sbjct: 327 VNDLLRSVQ 335
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
+D+ R+L P G +IG+ + L+ + + V D G + + ISS +
Sbjct: 23 DDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPERILTIISSNDN--- 78
Query: 406 ELFPAQEALLHIQTRIVDLGA-----------------DKDNIITTRLLVPSSEIGCLEG 448
A + L + + D G+ + + R+LV S+ GC+ G
Sbjct: 79 ----ALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIG 134
Query: 449 RDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRS 505
+ G + E+R TG+ I+I + C TD +VQI G+ D + EV L++
Sbjct: 135 KGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLKT 188
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
AG +IGK+G+ I+ IRQ +GA I + E G +ERII I+ T
Sbjct: 358 AGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGT 399
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGD 250
V RM+V + GC++GKGG ++++R +T ++I+I C MS + +VQ+ G
Sbjct: 118 VDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKI------YTSCCPMSTDRVVQITGK 171
Query: 251 INNVKNAVAIISSRLRES 268
N + V + L+ +
Sbjct: 172 PNTCSDCVREVLDLLKTA 189
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 45/198 (22%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV--HELIPGDEERIIEISDTRRRDPEGRM 140
IL K G VIGK G IK +++ TG + + + +P ++ + IS DP
Sbjct: 173 ILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRISG----DP---- 224
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM---- 196
Q+A L+ + I E D G FR G + +R+
Sbjct: 225 ---YKVQQARELVVEIIREKDQGD--------------------FRSGRSDFGSRLGSSI 261
Query: 197 --VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
V R VG ++G+ G++I++++ + +I+ P D P + + QV+G
Sbjct: 262 DVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------DRVAQVMGQPERC 315
Query: 255 KNAVAIISSRLRESQHRD 272
++AV +I+ ++ +Q RD
Sbjct: 316 QHAVHLINELVQTAQERD 333
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 41/216 (18%)
Query: 76 MVTTTYRILCHDMKA-----GGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 130
MV T I+ D K G +IG+ G I I+ + I + G +R ++
Sbjct: 76 MVHGTRAIITEDFKVPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGGMMDRPCTLTG 135
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGN 190
T PE S A+ L I DR G GF+ + + G+
Sbjct: 136 T----PE----SIEQAKRLLGQIVDRCRN---GPGFHSQMD-----------------GS 167
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+++ VG ++GKGG I+Q++ T ++ I+ +D +P + S++ +++ GD
Sbjct: 168 SAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKM-IMIQDDPMP---TGSDKPLRISGD 223
Query: 251 INNVKNAVAIISSRLRESQHRD----RSHFHGRLHS 282
V+ A ++ +RE D RS F RL S
Sbjct: 224 PYKVQQARELVVEIIREKDQGDFRSGRSDFGSRLGS 259
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHE-LIPGDEERIIEISDTRRRDPE 137
T + K G VIGK G IK+I++ TG + + E G + + + I+ DPE
Sbjct: 181 TQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITG----DPE 236
Query: 138 GRMPSFSPAQEALFLIHDRILES--DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+ A ++ + IL+S D G +G + G G+GGG R
Sbjct: 237 -------KVENARRMV-EEILQSREDHPPGHFG-----FPGSFGIGGG------QRSIGE 277
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V R VG ++GKGG+ I+++ E+ +I+ P D + E + G +
Sbjct: 278 VIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQ-----TTQERCAVIQGTAEQIA 332
Query: 256 NAVAIISSRLRES 268
A IS +++S
Sbjct: 333 KATQFISELVKKS 345
>gi|348672264|gb|EGZ12084.1| hypothetical protein PHYSODRAFT_465617 [Phytophthora sojae]
Length = 364
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 57 TSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
TSI + + A S+ K P L + + + + G ++G+ GSI+ +IR+ TGA I+V E
Sbjct: 96 TSITKAVSVAVSSGKKPELEIASPFHWMVQREDVGKMMGRQGSILAAIRRDTGATIHVDE 155
Query: 117 -LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYG 175
++PG ER + ++ G + S + A E E + + G
Sbjct: 156 DVVPGTTERRVVLT--------GSVDSIAAAVE--------------------EIKSKAG 187
Query: 176 GGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP 235
G V G R+ + G L+G G ++ + T +++I P LP
Sbjct: 188 GRPEVSATVANG---RLGQYFAIPYYAAGFLIGPQGSTVKHITERTGARLQI-PSAEDLP 243
Query: 236 RCVSMSEEIVQVVGDINNVKNAVAIISSRLRE 267
+ I+ + G ++A +++++LR+
Sbjct: 244 --LGSINRILHMQGTPKQTEHARRVVTAKLRD 273
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 328 SIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-ADP 386
++ +G P + PF+ +V R + VG+++G I+ ++ + G + V D
Sbjct: 105 AVSSGKKPELEIASPFHW--MVQR-----EDVGKMMGRQGSILAAIRRDTGATIHVDEDV 157
Query: 387 VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDN-IITTRLLVPSSEIGC 445
V G+ E+ + ++ G D + A E + ++ A N + +P G
Sbjct: 158 VPGTTERRVVLT---GSVDSIAAAVEEIKSKAGGRPEVSATVANGRLGQYFAIPYYAAGF 214
Query: 446 LEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
L G GS + + TGA +QI S E++P + + ++ + G + A VT +LR
Sbjct: 215 LIGPQGSTVKHITERTGARLQIPSAEDLP--LGSINRILHMQGTPKQTEHARRVVTAKLR 272
Query: 505 SYLYRDFFQKETPPSSTGPTGSALVVEAASP 535
YL + PSSTG G + ++ P
Sbjct: 273 DYLASPKCPRALNPSSTGRKGDKVTIKVLLP 303
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 35/195 (17%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 136
V T RIL H + G VIGK G +K+IR +GA + + + ERI+ I+ T
Sbjct: 19 VNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD--GSTPERIVTITGTTN--- 73
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
+ A E + L + E G + G + ++
Sbjct: 74 -----AICKATELIGLKVEEFFERQ--------------------NGDWNGPKAPLTFKL 108
Query: 197 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+V G ++GKGG I+++R + I++ LP + +E +V + G +
Sbjct: 109 IVPASQCGFIIGKGGCKIKEIRESSGAAIQV--ASDMLP---NSTERLVSITGTTGTISQ 163
Query: 257 AVAIISSRLRESQHR 271
V + + L +S R
Sbjct: 164 CVYQVCNVLLDSPPR 178
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 14/162 (8%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
+L R+L +VG VIG+ V+ ++++ G + ++D + E+I+TI+ G +
Sbjct: 20 NLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD--GSTPERIVTIT---GTTNA 74
Query: 407 LFPAQEAL-LHIQTRIVDLGADKDN---IITTRLLVPSSEIGCLEGRDGS-LSEMRRSTG 461
+ A E + L ++ D + +T +L+VP+S+ G + G+ G + E+R S+G
Sbjct: 75 ICKATELIGLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSG 134
Query: 462 ANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
A IQ+ S + +P + T+ LV I G + +V L
Sbjct: 135 AAIQVAS-DMLP---NSTERLVSITGTTGTISQCVYQVCNVL 172
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 70 PKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERIIEI 128
PK P T++++ + G +IGK G IK IR+ +GA I V +++P ER++ I
Sbjct: 100 PKAP-----LTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQVASDMLPNSTERLVSI 154
Query: 129 SDT 131
+ T
Sbjct: 155 TGT 157
>gi|147906092|ref|NP_001080641.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|28278093|gb|AAH44277.1| Fubp1 protein [Xenopus laevis]
Length = 653
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 178 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKE 237
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R G N + +
Sbjct: 238 M--------VLELIRDQ-------GGFR-EIRNEYGS---------RIGANE-GIDVPIP 271
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D S+P E I Q+ G + ++A
Sbjct: 272 RFAVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGSVP------ERIAQITGPQDGCQHAAE 325
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 326 IINDLLRSVQ 335
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISD 130
S T + ++ + K G +IGK+G I+ ++ ++GA I + + P R +E+
Sbjct: 171 SETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVEL-- 228
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRILESDGGG-------GFYGEEEEEYGGGGGVGGG 183
+ S +A LI D I E+D GG GF
Sbjct: 229 ---------IGSLENINKAEKLIKDVIAEADAGGSPSLVARGF----------------A 263
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
+ G ++ V VG ++GKGG+ I+ ++ + +I+++P+ LP E
Sbjct: 264 TAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQH--LPEGDQSKER 321
Query: 244 IVQVVGDINNVKNAVAIISSRLRE 267
V+V GD ++ A +I + +
Sbjct: 322 TVRVTGDKKQIEMAREMIKEVMNQ 345
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 143/354 (40%), Gaps = 64/354 (18%)
Query: 67 NSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII 126
N+ P D S + R + +A VIGK G + +R+ +GA V + G ERI+
Sbjct: 116 NALPHDESGWIHV--RSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERIL 173
Query: 127 EISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR 186
+S G + + + A F + R L ++ + Y
Sbjct: 174 TVS--------GVVDAVAKA----FGLIIRTLNNEPLEAPSDSTSKTY------------ 209
Query: 187 GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQ 246
R+++ + +G ++GKGG I++++ + R+ D LP +E +
Sbjct: 210 ------PLRLLIPHILIGSIIGKGGVRIKEIQEASGA--RLNASDSYLPLS---TERSLV 258
Query: 247 VVGDINNVKNAVAIISSRLRESQHRDR------SHFHGRLHSP--------------DRF 286
V+G + V A + S L E Q +R S + R P DR
Sbjct: 259 VLGVADAVHIATYYVGSTLFE-QLTERFGGPAASAYASRSGGPAGVVPGAMPNHTVKDRH 317
Query: 287 FPDDDYVPHMNNTARRPSMDGARFSGSNY--RSNNYGPRPSGYSIEAGAAPMSDSVQPFY 344
+ H+ P++ G G ++ + P+P G + G PM ++
Sbjct: 318 LTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAVPQPHGATGPQGQ-PMPGAIP--- 373
Query: 345 GEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITIS 398
G+ L ++ P D VG +IG+ + ++ G +K+ +P D S+E+++TI+
Sbjct: 374 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTIT 427
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 43/227 (18%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HEL 117
S R+N+ +D L + ++L AG +IGK G I +++ TGA I + +
Sbjct: 20 TSTKRSNTAGEDGELFL----KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDF 75
Query: 118 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
PG ER+ + + E+L +H+ F E+ E G
Sbjct: 76 YPGTTERVCLVQGS---------------AESLLSVHN----------FIAEKVREVPQG 110
Query: 178 GGVGGGGFR-------GGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR 230
G G +++V G ++GKGG + + E+ +++ +
Sbjct: 111 GTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQK 170
Query: 231 DHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFH 277
P ++ E +V V G+ + V+ A+ I + RE + +H +
Sbjct: 171 ----PAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLN 213
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 599 PLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPE 658
P+ T +V +PD +I K + + R E SGA + + + G +II ISGT E
Sbjct: 188 PIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISGTRE 247
Query: 659 QVERAQSVLQGFILSTQ 675
Q++ AQ +LQ + +++
Sbjct: 248 QIQAAQYLLQQCVRTSE 264
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPE--- 137
++L H+ AG VIG+ GS IK +R+ TGA + V P ERI+ ++ + +
Sbjct: 49 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCIN 108
Query: 138 ------GRMPSFSPAQEALFLIHDRILESDGGG-----------------GF-------- 166
+P P + + +D + SD GG GF
Sbjct: 109 IIIDVLKEIPIKGPVRPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDFGFSSGIIPSR 168
Query: 167 YGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 226
Y ++ YGG + G + T++ + G ++GKGG I ++R E+ QI
Sbjct: 169 YPGRDDRYGGMRDM-MGRYSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIE 227
Query: 227 ILP-RDHSLPRCVSMS 241
+ P RD+ R +++S
Sbjct: 228 VEPHRDNGGDRIITIS 243
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+N++S ++ + + D V TT + D+ AG +IGK G IK IR +GA I
Sbjct: 336 DNSSSWDSYQSGGRGSYNDMGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIK 394
Query: 114 VHELIPGDEERIIEISDTR 132
+ E + G E+RII IS T+
Sbjct: 395 IDEPLEGSEDRIITISGTQ 413
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 310 FSGSNYRSNNYGPRPSGYS--IEAGAAPMSDSVQPFY-----------GEDLVFRMLCPI 356
+ GS+ RSN+ RP YS + G S S + G + ++ P
Sbjct: 309 YRGSDERSNDRRGRPDRYSDSMSGGGYDNSSSWDSYQSGGRGSYNDMGGPVITTQVTIPK 368
Query: 357 DKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
D G +IG+ ++ +++E G +K+ +P++GS+++IITIS G D++ AQ L
Sbjct: 369 DLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIS---GTQDQIQNAQYLL 423
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 138/349 (39%), Gaps = 64/349 (18%)
Query: 323 RPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLK 382
RPS + A +P D +ML P VG +IG+ V + LK
Sbjct: 180 RPSPFGFGARGSP-----------DTPLKMLVPASVVGAIIGKGGSTVRQI-----TQLK 223
Query: 383 VADPVDGSDEQIITISSEEGPDDE----LFPAQEALLHIQTRIVDL--GADKDNIITTRL 436
+ + EGP + ++ A EA RI+++ +KDN + ++
Sbjct: 224 -------DSRARVDVHRREGPGSDKVATIYGAPEACGAAAIRILEIVRKEEKDNELPLKV 276
Query: 437 LVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
L ++ IG L GRDG +L ++ TG I I S E+ D + I GE++ +A
Sbjct: 277 LAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSPY--NMDRTISIHGEVKGISEA 334
Query: 496 LVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITPAREVQTVTDPPAATH 555
++T +LR F+ + S L + + + P +Q+ T PPA
Sbjct: 335 EQQITEKLRQ------FETDMAAMSQQSLYPGL---NSQQMQMFPG--LQSPTAPPAYN- 382
Query: 556 QSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAV 615
S +VS++V + + + T+ T+ +++P AV
Sbjct: 383 -------VSYQGSYFFKNVSQSVFFSGNSSSNN-------------TQETVTLLIPSGAV 422
Query: 616 PKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQ 664
+I T + S ++GAS+ + + + I G PE +AQ
Sbjct: 423 GAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGVPESQWKAQ 471
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 58/218 (26%)
Query: 27 PRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCH 86
P YN YQ + ++ N + + + N+S NN+ T +L
Sbjct: 379 PAYNVSYQGSYFFK-----NVSQSVFFSGNSSSNNTQE---------------TVTLLIP 418
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
G +IG G+ I++I + GA I +H D + + I PE +
Sbjct: 419 SGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGV----PESQW------ 468
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
+A F I D++ + G++G EE R+ T++ + VG +
Sbjct: 469 -KAQFCIFDKLKQE----GWFGNEE------------------GRLTTQITIPGKLVGRI 505
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEI 244
+GKGG + +++ T +++ I PR L + SEEI
Sbjct: 506 IGKGGVNVRELQRITSSEVTI-PRQGEL----NTSEEI 538
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT+ ++ + K G +IGK G I+ ++ ++GA I + + D S TR +
Sbjct: 199 TTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPH-----STTRPVELI 253
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
G + S S A++ LI+ I E+D GG G+ G G+++ M
Sbjct: 254 GTLSSISKAEK---LINAVIAEADAGGSPSLVAR-------GLPSAQTAGVGDQI--EMQ 301
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V VG ++G+GG I+ ++ ++ +I+++P+ P + E V+V GD ++ A
Sbjct: 302 VPNEKVGLIIGRGGDTIKALQAKSGARIQLIPQ--HPPEGDASKERTVRVTGDRKQIEIA 359
Query: 258 VAII 261
+I
Sbjct: 360 REMI 363
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 76/413 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
R+L G +IGK G+ I++I + T + I++H + G E+ I I T PEG
Sbjct: 121 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST----PEG-- 174
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A +I + I++ + + EE + +++
Sbjct: 175 -----CSTACKIIME-IMQKEAQDTKFTEE---------------------IPLKILAHN 207
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
VG L+GK G+ ++++ +T T+I I P +D +L E + V G I A
Sbjct: 208 NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEE 263
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I ++RES D + + + H +P +N A F S+
Sbjct: 264 EIMKKIRESYENDIAAMNLQAH----------LIPGLNLNAL------GLFPPSSSGIPP 307
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
++ +A + S PF E + P VG +IG+ ++ L G
Sbjct: 308 P-------AVSVASAAAAASYPPFGPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGA 360
Query: 380 DLKVADPVDGSDEQI--ITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLL 437
+K+A P +G D ++ + I+ GP + F AQ + G ++ + +
Sbjct: 361 SIKIA-PAEGPDAKLRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIK 416
Query: 438 VPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEI 489
VPS G + G+ G +++E++ T A + ++ R++ P DE Q+V +I
Sbjct: 417 VPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP------DENDQVVVKI 462
>gi|90076756|dbj|BAE88058.1| unnamed protein product [Macaca fascicularis]
Length = 536
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP---GDEERIIEISDTRRRDPEGR 139
I+ KAG VIGK G IK +++ G + + + P G ++ + D +
Sbjct: 82 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 141
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
M L LI D+ GGF E EYG R GGN + +
Sbjct: 142 M--------VLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 175
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 176 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 229
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 230 IITDLLRSVQ 239
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT+ +I ++K G +IGK G IK ++ +GA I + D + + TR +
Sbjct: 85 TTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSL-----TRDVELM 139
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
G S A++ LI++ I E+D GG + GV + N+VA
Sbjct: 140 GTSEQVSRAEQ---LINEVIAEADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVA---- 192
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
++GKGG+ I+ ++ ++ +++I+P LP + +E V + G +++A
Sbjct: 193 -------LVIGKGGETIKSIQSKSAARVQIIPLH--LPPGDTSTERSVYINGLKEQIESA 243
Query: 258 VAII 261
+I
Sbjct: 244 KELI 247
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
TT+ +I ++K G +IGK G IK ++ +GA I + D + + TR +
Sbjct: 85 TTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSL-----TRDVELM 139
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
G S A++ LI++ I E+D GG + GV + N+VA
Sbjct: 140 GTSEQVSRAEQ---LINEVIAEADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVA---- 192
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
++GKGG+ I+ ++ ++ +++I+P LP + +E V + G +++A
Sbjct: 193 -------LVIGKGGETIKSIQSKSAARVQIIPLH--LPPGDTSTERSVYINGLKEQIESA 243
Query: 258 VAII 261
+I
Sbjct: 244 KELI 247
>gi|330917577|ref|XP_003297863.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
gi|311329164|gb|EFQ93994.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
Length = 371
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
S S +A L +LE G GG R G R+++S
Sbjct: 97 --SLSGISKAYGLAAKGLLEGAPAMGM---------------GGVIRTDGTH-PIRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+Q ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKQ--IQDASGVRMVAQKEMLPQS---TERIVEVQGSPAGIEKAVW 193
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 194 EIGKCLIDDHER 205
>gi|343424730|emb|CBQ68268.1| related to poly(rC)-binding protein 3 [Sporisorium reilianum SRZ2]
Length = 436
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 30/202 (14%)
Query: 72 DPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDT 131
DP+ T R L +AG +IGK G+ + +R+ TG V +++PG +R++ ++ T
Sbjct: 42 DPN--ATLLVRALVSTKEAGIIIGKGGANVADLREQTGVKAGVSKVVPGVHDRVLSVTGT 99
Query: 132 RRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+A LI ILE+ + G
Sbjct: 100 -----------LVGIADAFALIAKTILENPLNTPVQAD------------GSPAESAAQS 136
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+ R+++S +G ++G+ G I+ ++ + R++ LP+ +E +V+V G +
Sbjct: 137 TSVRLLISHNLMGTVIGRQGLKIKH--IQDLSGARMVASKEMLPQS---TERVVEVQGSV 191
Query: 252 NNVKNAVAIISSRLRESQHRDR 273
++++ A+ I L E R +
Sbjct: 192 DSIRVAIHEIVKCLAEDWDRSQ 213
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 46/214 (21%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL AG +IGK G+ IK +R A + V + ER++ +
Sbjct: 29 RILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPD--SSGPERVLTVG------------ 74
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ AL ++ D I + F E E R ++ +
Sbjct: 75 --ANLGTALEILLDVIPSLEDYKRFKDLEFE-------------------CEMRWLIHQS 113
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
GC++G+GG I+++R ET QI++ P+ SE IVQ+ G V N++A I
Sbjct: 114 QAGCVIGRGGNKIKELRDETGAQIKVY--SQCAPQS---SERIVQLTGKPRVVVNSLATI 168
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPH 295
L+ + + ++ + P+ F D+ Y P
Sbjct: 169 FDLLQTAPPKGFNN----PYDPNNF--DEFYAPE 196
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
AG +IGK GS I+ IRQ +GA IN+ E + G ++RII I+ ++
Sbjct: 335 AGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQ 377
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+ RM+ + G +IG+ V+ + + G + ++D E+I+T++ G D++
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISD--SSCPERIVTVT---GTTDQI 56
Query: 408 FPAQEALLHIQTRIVDLGADKDNI-------ITTRLLVPSSEIGCLEGRDGS-LSEMRRS 459
F +A I + + + N +T RL+VP+S+ G L G+ G+ + E+R
Sbjct: 57 F---KAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIREL 113
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
TGA+IQ+ S E +P + T+ V + G+ A + + +
Sbjct: 114 TGASIQVAS-EMLP---NSTERAVTVSGQADAITQCIYNICCVM 153
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HEL 117
I N++N + + PK P T R++ + G +IGK G+ IK IR+ TGA I V E+
Sbjct: 71 IVNTHN-STTLPKPP-----VTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEM 124
Query: 118 IPGDEERIIEIS 129
+P ER + +S
Sbjct: 125 LPNSTERAVTVS 136
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 126/318 (39%), Gaps = 75/318 (23%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R L A +IGK+GS + IR+ +GA + V E IPG+ ERI+ +S G +
Sbjct: 66 RCLIVTQDASIIIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVS--------GPLD 117
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ S +A LI RI +E + G V + ++
Sbjct: 118 AVS---KAFGLIVRRI------------NDEPFDKPS-------VPGSRAVTIKFMIPNS 155
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAII 261
+G ++GKGG I++ ++ + R+ + LP +E ++ V G + + A I
Sbjct: 156 RMGSVIGKGGTKIKE--IQEASGARLNASETMLP---GSTERLLSVSGVADAIHIATYYI 210
Query: 262 SSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGAR------------ 309
+ L E+ R +P NN++ RPS A
Sbjct: 211 GNILIEANER---------------------MPTTNNSSYRPSSYQASSAPPSSTPRGRP 249
Query: 310 -FSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEG 368
+SGS+Y YG P Y+ A AAP + + P D VG +IG+
Sbjct: 250 PYSGSSYVPGGYGQNP--YAPAAPAAPAPGPPSQLQTQQIYI----PNDLVGCIIGKGGA 303
Query: 369 IVELLQNEIGVDLKVADP 386
+ +++ +K+ +P
Sbjct: 304 KINEIRHMSASQIKIMEP 321
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 28/193 (14%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDE 406
++ R L +IG++ V ++ + G + V++ + G+ E+I+ +S GP D
Sbjct: 62 NIHMRCLIVTQDASIIIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVS---GPLDA 118
Query: 407 LFPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRST 460
+ +A I RI D DK ++ +T + ++P+S +G + G+ G+ + E++ ++
Sbjct: 119 V---SKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEAS 175
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDA-------LVEVTTRL-----RSYLY 508
GA + S +P T+ L+ + G A A L+E R+ SY
Sbjct: 176 GARLN-ASETMLPGS---TERLLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRP 231
Query: 509 RDFFQKETPPSST 521
+ PPSST
Sbjct: 232 SSYQASSAPPSST 244
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
T + + + + G VIGK G+ IK I++ +GA +N E ++PG ER++ +S
Sbjct: 145 AVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASETMLPGSTERLLSVS 197
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILP-------RDHSLPRCVSMSEEIVQVVGDINNVK 255
VGC++GKGG I ++R + +QI+I+ + + S E +V + G N++
Sbjct: 294 VGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGLNGAAAPAGSEGERLVVITGQPANIQ 353
Query: 256 NAVAIISSRLRESQHR 271
AV ++ SRL + + +
Sbjct: 354 MAVQLLYSRLEQEKQK 369
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 323 RPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLK 382
RPS + A +P D +ML P VG +IG+ V + LK
Sbjct: 166 RPSPFGFGARGSP-----------DTPLKMLVPASVVGAIIGKGGSTVRQI-----TQLK 209
Query: 383 VADPVDGSDEQIITISSEEGPDDE----LFPAQEALLHIQTRIVDL--GADKDNIITTRL 436
+ + EGP + ++ A EA RI+++ +KDN + ++
Sbjct: 210 -------DSRARVDVHRREGPGSDKVATIYGAPEACGAAAIRILEIVRKEEKDNELPLKV 262
Query: 437 LVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA 495
L ++ IG L GRDG +L ++ TG I I S E+ D + I GE++ +A
Sbjct: 263 LAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSPY--NMDRTISIHGEVKGISEA 320
Query: 496 LVEVTTRLRSY 506
++T +LR +
Sbjct: 321 EQQITEKLRQF 331
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + E GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHSDAE-----------------GNSTVQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERAGVKM-VMIQDGPLP---TGTDKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE + D R F RL
Sbjct: 223 QAREMVLEIVREKEQADFRGVRGDFSSRL 251
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ G + + + +P ++ + I+ D
Sbjct: 162 STVQEILIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPLPTGTDKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + + E +E+ ++ G G GG V+
Sbjct: 218 P------FK-VQQAREMVLEIVRE---------KEQADFRGVRGDFSSRLAGGSIEVS-- 259
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
V R VG ++G+ G++I++++ + +I+ P D P E QV+G + +
Sbjct: 260 --VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A II+ + +Q RD
Sbjct: 312 HAAHIINELILTAQERD 328
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHSDAEGNSTVQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E V++ E V
Sbjct: 186 KQLQERAGVKMVMIQDGPLPTGTDKPLRITGDPFKVQQAREMVLEIVREKEQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFSS----RLAGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHIINELILTAQERD 328
>gi|356538917|ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
Length = 794
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT +I + K G +IGK+G I+ ++ ++GA I + D + TR + G
Sbjct: 197 TTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADAD-----PLCATRSVELIG 251
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV- 197
+ S A++ L++ I E+D GG + G V + +
Sbjct: 252 SLESIDKAEK---LMNAVIAEADAGGSP------------SLVARGLSPAQATVGSEQIQ 296
Query: 198 --VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
V VG ++G+ G+ I+ ++ ++ +I+++P+ LP E VQV GD ++
Sbjct: 297 IQVPNEKVGLIIGRSGETIKSLQTKSGARIQLIPQH--LPEGDDSKERTVQVTGDKRQIQ 354
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLH 281
A +I + + F + H
Sbjct: 355 IAQELIKEVMNQPVRPSSGGFGQQAH 380
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 341 QPFYGEDLVFRML-CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISS 399
QP G+++ R + P +KVG +IG++ + LQ G +++ D +D T S
Sbjct: 189 QPTSGDEITTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD-ADPLCATRSV 247
Query: 400 EEGPDDELFPAQEALLHIQTRIVDLGADKDNII-------------TTRLLVPSSEIGCL 446
E E E L++ D G + ++ VP+ ++G +
Sbjct: 248 ELIGSLESIDKAEKLMNAVIAEADAGGSPSLVARGLSPAQATVGSEQIQIQVPNEKVGLI 307
Query: 447 EGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEV 499
GR G ++ ++ +GA IQ++ + +P + VQ+ G +IQ A++ + EV
Sbjct: 308 IGRSGETIKSLQTKSGARIQLIP-QHLPEGDDSKERTVQVTGDKRQIQIAQELIKEV 363
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 45/201 (22%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRRDPEG 138
+I + + G +IGK G IK ++ +GA I V + P + R++E+ T
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDA---- 144
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFR-----GGGNRVA 193
A LI++ + E++ G GG R GG+
Sbjct: 145 -------VSSAEKLINEVLAEAEAGASV----------------GGTRRMVAQSGGDEFV 181
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
M + VG ++GKGG+ I+ M+ T +I+++P H P S +E +++ G +
Sbjct: 182 --MQIPNNKVGLIIGKGGETIKGMQASTGARIQVIPL-HPPPGDTS-TERTLKIDGTPDQ 237
Query: 254 VKNAVAIIS------SRLRES 268
+++A +++ +RLR S
Sbjct: 238 IESAKQLVNQILTGENRLRNS 258
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 30/197 (15%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKV-----ADPVDGSDEQII-------TIS 398
++ P +VG +IG+ ++ LQ + G ++V ADP S +++ +S
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADP--NSQTRMVELMGTPDAVS 146
Query: 399 SEEGPDDELFPAQEALLHI-QTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEM 456
S E +E+ EA + TR + + D + + +P++++G + G+ G ++ M
Sbjct: 147 SAEKLINEVLAEAEAGASVGGTRRMVAQSGGDEFV---MQIPNNKVGLIIGKGGETIKGM 203
Query: 457 RRSTGANIQILSREEVPACVSGTDELVQIVG---EIQAARDALVEVTT---RLR----SY 506
+ STGA IQ++ P S T+ ++I G +I++A+ + ++ T RLR S
Sbjct: 204 QASTGARIQVIPLHPPPGDTS-TERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNSG 262
Query: 507 LYRDFFQKETPPSSTGP 523
Y + PPSS P
Sbjct: 263 GYTQQGYQSRPPSSWAP 279
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 359 VGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQ 418
G +IG+ ++ ++ E V KV P E+++ + + G E+F E L +Q
Sbjct: 2 AGVIIGKGGENIQRIREEYSV--KVMIPDSNGPERVLVLDGDLGSVLEIF--VENLERMQ 57
Query: 419 TRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVS 477
++D + RLLV S+ GC+ GR G + E+R +G +Q L ++ C
Sbjct: 58 N-------NRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQSG--LQTLKVYQM-LCPG 107
Query: 478 GTDELVQIVGEIQAARDALVEVTTRL 503
TD ++Q+VG++ D L + L
Sbjct: 108 STDRVIQLVGDLDKVVDCLQAIAELL 133
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHE-LIPGDEERIIEISDTRRRDPE 137
T + K G VIGK G IK+I++ TG + + E G + + + I+ DPE
Sbjct: 128 TQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITG----DPE 183
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+ A ++ + IL+S E+ G G G GGG R ++
Sbjct: 184 -------KVENARRMV-EEILQS---------REDHPPGHFGFPGSFGIGGGQRSIGEVI 226
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R VG ++GKGG+ I+++ E+ +I+ P D + E + G + A
Sbjct: 227 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQ-----TTQERCAVIQGTAEQIAKA 281
Query: 258 VAIISSRLRES 268
IS +++S
Sbjct: 282 TQFISELVKKS 292
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 128 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGT---- 181
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 182 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNNTIQE 217
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ I+ +D LP + +++ +++ GD V+
Sbjct: 218 ILIPASKVGLVIGKGGETIKQLQERTGVKM-IMIQDGPLP---TGADKPLRITGDPFKVQ 273
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D RS F R+
Sbjct: 274 QAREMVLEIIREKDQADFRGVRSDFSSRM 302
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDP 136
T IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP
Sbjct: 214 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITG----DP 269
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
F Q+A ++ + I E D G + GGG +
Sbjct: 270 ------FK-VQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---------------SI 307
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+ V R VG ++G+ G++I++++ + +I+ P D P E + QV+G
Sbjct: 308 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERVAQVMGLPERC 361
Query: 255 KNAVAIISSRLRESQHRD 272
++A +IS + +Q RD
Sbjct: 362 QHAAHVISDLILTAQERD 379
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI E P ++GT E
Sbjct: 128 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPE---- 183
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 184 --SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVG-----LVIGKGGETI 236
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V +
Sbjct: 237 KQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRS 296
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + ++EV +P +AV +I ++ ++ + +G + +++
Sbjct: 297 DFSS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVA 352
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G PE+ + A V+ IL+ Q+ D
Sbjct: 353 QVMGLPERCQHAAHVISDLILTAQERD 379
>gi|298707114|emb|CBJ29906.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 308
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 191 RVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGD 250
+ A +++V + GCL+GKGGKII Q++ T T++++ ++ P + + V G+
Sbjct: 121 KFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFP---GTHDRVALVQGE 177
Query: 251 INN-VKNAVAIISSRLRES 268
V AVA + RLRE+
Sbjct: 178 QPTLVAEAVAEMLRRLREA 196
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEISDTRRRDP 136
++L + AG +IGK G II I+ +T + + +E PG +R+ +
Sbjct: 123 ALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALV-------- 174
Query: 137 EGRMPSFSPAQEALFLIHDRILESD---------GGGGFYGEEEEEYGGGGGVGGGGFRG 187
+G P+ EA+ + R+ E+ GGG Y E YG G G G G
Sbjct: 175 QGEQPTL--VAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHEGYGSG---GLDGPHG 229
Query: 188 GGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRD 231
+V R++V G ++G+GG+ I+ + T ++ + +D
Sbjct: 230 RDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKD 273
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 143/343 (41%), Gaps = 41/343 (11%)
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
P VG +IG+ + +Q E G +++A G ++ T++ G + + A+ L
Sbjct: 90 PDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLT---GSPENIEQAKRLL 146
Query: 415 LHI--QTRI-VDLGADKD-NIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSR 469
I Q R D D N ++L+P++++G + G+ G ++ +++ TG + ++
Sbjct: 147 SEIIEQCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQD 206
Query: 470 EEVPACVSGTDELVQIVGE---IQAARDALVEVTTRLRSYLYRDF-FQKETPPSSTGPTG 525
+ +P +G D+ ++I G+ +Q AR+ +V++ +R DF + S G T
Sbjct: 207 DPMP---TGADKPLRITGDPLKVQQARELVVKL---IRDKDQGDFRTGRAEFGSKMGGTS 260
Query: 526 SALVV-------------EAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAG 572
+VV E I +Q D + + Q+ + A
Sbjct: 261 LDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVH 320
Query: 573 SVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPK-----LITKSKTLLT 627
++E V+ + V RV L+ V YAVP +I K +
Sbjct: 321 LINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVT--YAVPADKCGLVIGKGGETIK 378
Query: 628 RFSEMSGASVSLVEGQPEGTQ---KIIQISGTPEQVERAQSVL 667
E S A V L P T +I I GTP+Q+E+A+ ++
Sbjct: 379 NIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQLI 421
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT D G +IGK G I I+Q +G I I D +++ T PE
Sbjct: 83 TTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQ----IASDSGGMLDRPCTLTGSPEN 138
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVV 198
++A L+ + I + G GF+ + + GN +M++
Sbjct: 139 -------IEQAKRLLSEIIEQCRYGPGFHNDMD-----------------GNGSIQQMLI 174
Query: 199 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAV 258
VG ++GKGG+ I+Q++ T Q+ ++ +D +P + +++ +++ GD V+ A
Sbjct: 175 PANKVGLVIGKGGETIKQLQERTGVQMMMI-QDDPMP---TGADKPLRITGDPLKVQQAR 230
Query: 259 AIISSRLRESQHRD----RSHFHGRL 280
++ +R+ D R+ F ++
Sbjct: 231 ELVVKLIRDKDQGDFRTGRAEFGSKM 256
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINV--HELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
K G VIGK G IK +++ TG + + + +P ++ + I+ DP
Sbjct: 178 KVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITG----DP-------LKV 226
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
Q+A L+ I + D G G E G +GG + +VV R VG +
Sbjct: 227 QQARELVVKLIRDKDQGDFRTGRAEF----GSKMGG---------TSLDVVVPRFAVGII 273
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
+G+ G++I++++ + +I+ D P + + QV+G + +AV +I+ ++
Sbjct: 274 IGRNGEMIKKIQNDAGVRIQFKQDDGISP------DRVAQVMGQPEHCHHAVHLINELVQ 327
Query: 267 ESQHRDRSHFHGR 279
+Q RD GR
Sbjct: 328 TAQERDGYGVMGR 340
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NN+S + + D V TT + D+ AG +IGK G IK IR +GA I
Sbjct: 332 DNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIK 390
Query: 114 VHELIPGDEERIIEISDTR 132
+ E + G E+RII I+ T+
Sbjct: 391 IDEPLEGSEDRIITITGTQ 409
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 307 GARFSGSNY------RSNNYGPRPSGY--SIEAGAAPMSDSVQPFY-----------GED 347
G RFS +Y R N+ RP S+ G + S +PF G
Sbjct: 296 GDRFSHQSYHSNMDDRPNDRRGRPGDRYESMSGGGYDNNSSWEPFQSGGRGSYSDIGGPV 355
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+ ++ P D G +IG+ ++ +++E G +K+ +P++GS+++IITI+ G D++
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT---GTQDQI 412
Query: 408 FPAQEAL 414
AQ L
Sbjct: 413 QNAQYLL 419
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 54 NNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWIN 113
+NN+S + + D V TT + D+ AG +IGK G IK IR +GA I
Sbjct: 332 DNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDL-AGSIIGKGGQRIKQIRHESGASIK 390
Query: 114 VHELIPGDEERIIEISDTR 132
+ E + G E+RII I+ T+
Sbjct: 391 IDEPLEGSEDRIITITGTQ 409
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 307 GARFSGSNY------RSNNYGPRPSGY--SIEAGAAPMSDSVQPFY-----------GED 347
G RFS +Y R N+ RP S+ G + S +PF G
Sbjct: 296 GDRFSHQSYHSNMDDRPNDRRGRPGDRYESMSGGGYDNNSSWEPFQSGGRGSYSDIGGPV 355
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
+ ++ P D G +IG+ ++ +++E G +K+ +P++GS+++IITI+ G D++
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT---GTQDQI 412
Query: 408 FPAQEAL 414
AQ L
Sbjct: 413 QNAQYLL 419
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 84 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 137
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 138 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNSTVQE 173
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ + VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 174 IPIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 229
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D RS F R+
Sbjct: 230 QAREMVLEIIREKDQADFRGVRSDFSSRM 258
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 48/329 (14%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 43 TLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG------- 95
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+A ++ +LE G +G GG R++
Sbjct: 96 ----PLQGTAKAYAIVAKGLLE----------------GAPQLGMGGVASNNGTHPVRLL 135
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A
Sbjct: 136 ISHNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKA 190
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY-R 316
V I L + R L++P P N+ S G + G +Y R
Sbjct: 191 VWEIGKCLIDDWQRGTGTV---LYNP-AVRASVGGGPLNNSLGSGASTGG--YGGRSYNR 244
Query: 317 SNN---YGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGI 369
+ N + + GY+ + + S + P ED + P D VG +IG
Sbjct: 245 TGNGADFSDQTGGYNRRSNSDAASRGI-PLVTEDGEEVQTQNISIPSDMVGCIIGRGGSK 303
Query: 370 VELLQNEIGVDLKVAD-PVDGSDEQIITI 397
+ ++ G + +A P D + E++ TI
Sbjct: 304 ISEIRRSSGARISIAKAPHDETGERMFTI 332
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I
Sbjct: 277 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISI 317
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 154/370 (41%), Gaps = 69/370 (18%)
Query: 317 SNNYGPRPSGYSIEAGAAPMSD-----SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
S Y P P ++ + PM++ P Y + FRM CP+ + VIG+ ++
Sbjct: 169 SQAYDPVPFANHLDYTSRPMANHQAERESDPTY---VSFRMYCPVKEASFVIGKRGDMIN 225
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
L+ + ++V++ + E+II++ +GP + + +A I I++ D+
Sbjct: 226 HLREKANARIQVSENIKDVQERIISV---KGPAENV---AKAFGLITRAILEEPEDEPAS 279
Query: 432 ITTR-----LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
I +R +L+P +G + G+ GS E+ ++ A ++ + + +P + TD ++ +
Sbjct: 280 IMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQPLP---NSTDRVLSV 335
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQKET-------------------PPSSTGPTG- 525
+G A A+ ++ + ++D +K P ++ G TG
Sbjct: 336 LGVGDAIHIAIYYISQVIIE--HKDILKKHKIVYYTPGNNQLMNNTMGLIPNNTYGNTGI 393
Query: 526 -SALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSETVKQNESE 584
++ +P R+ Q P A +H + P +Q + G+
Sbjct: 394 IGNDPIQGGAPFQHNYQRQFQ----PSAPSHNQITTPVPTQSYTDEHGNTM--------- 440
Query: 585 RREDVPTVINRVPLPLVT---RSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVE 641
+ VI VP+P T + + +V + + + +I K + + E SG S +E
Sbjct: 441 ----IGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIE 496
Query: 642 GQPEGTQKII 651
P+ Q I+
Sbjct: 497 --PDQHQTIM 504
>gi|395532670|ref|XP_003768392.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Sarcophilus harrisii]
Length = 438
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 44/321 (13%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGSIENCCKAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S +GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVSGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P +V+I
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENEQVIVKI 400
Query: 486 VGEIQAA-------RDALVEV 499
+G A+ RD L +V
Sbjct: 401 IGHFYASQMAQRKIRDILAQV 421
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 79 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGT---- 132
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 133 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNNTIQE 168
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ I+ +D LP + +++ +++ GD V+
Sbjct: 169 ILIPASKVGLVIGKGGETIKQLQERTGVKM-IMIQDGPLP---TGADKPLRITGDPFKVQ 224
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D RS F R+
Sbjct: 225 QAREMVLEIIREKDQADFRGVRSDFSSRM 253
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDP 136
T IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP
Sbjct: 165 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITG----DP 220
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
F Q+A ++ + I E D G + GGG +
Sbjct: 221 ------FK-VQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---------------SI 258
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+ V R VG ++G+ G++I++++ + +I+ P D P E + QV+G
Sbjct: 259 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERVAQVMGLPERC 312
Query: 255 KNAVAIISSRLRESQHRD 272
++A +IS + +Q RD
Sbjct: 313 QHAAHVISDLILTAQERD 330
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI E P ++GT E
Sbjct: 79 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPE---- 134
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 135 --SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVG-----LVIGKGGETI 187
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V +
Sbjct: 188 KQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRS 247
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + ++EV +P +AV +I ++ ++ + +G + +++
Sbjct: 248 DFSS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVA 303
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G PE+ + A V+ IL+ Q+ D
Sbjct: 304 QVMGLPERCQHAAHVISDLILTAQERD 330
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 36/196 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDP 136
+ + ++ KAG VIGK G IK +++ G + + + P + ++ + IS DP
Sbjct: 175 SVHEMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISG----DP 230
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM 196
F Q+A ++ D I + GF E+ EYG R GG
Sbjct: 231 ------FK-VQQAKDMVMDLIRDQ----GFR-EQRGEYGS---------RAGGGGGGGES 269
Query: 197 V---VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ +T +I+ P D S P E I Q++G +
Sbjct: 270 LDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTP------ERIAQIMGPPDR 323
Query: 254 VKNAVAIISSRLRESQ 269
++A II+ LR Q
Sbjct: 324 AQHAADIITDLLRSVQ 339
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDD 405
ED+V R+L P G VIG+ ++ ++ + + V D E+ I IS++
Sbjct: 21 EDMV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQISADI---- 73
Query: 406 ELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANI 464
++ L I T ++ ++D+ RLL+ S GC+ G+ G + E+R G
Sbjct: 74 ------DSTLEIITEMLKYFEERDDEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRF 127
Query: 465 QILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
+ P TD +VQ VG+ DA+ EV T R
Sbjct: 128 LKVFSNVAPQS---TDRVVQTVGKQTQVIDAVREVITLTR 164
>gi|100816392|ref|NP_003925.1| far upstream element-binding protein 3 [Homo sapiens]
gi|297685554|ref|XP_002820351.1| PREDICTED: far upstream element-binding protein 3 [Pongo abelii]
gi|37078499|sp|Q96I24.2|FUBP3_HUMAN RecName: Full=Far upstream element-binding protein 3;
Short=FUSE-binding protein 3
gi|119608343|gb|EAW87937.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|119608344|gb|EAW87938.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|187950609|gb|AAI37339.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|187951661|gb|AAI37341.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|194379238|dbj|BAG58170.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 220
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 221 ----------VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 310 CQHAAHIISELILTAQERD 328
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 55 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 114
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 115 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 168
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 169 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 223
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V N + ++EV +P +AV +I ++ ++ +
Sbjct: 224 AREMVLEIIREKDQADFRGVRGDFNS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 280 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 35/332 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE-EGPDDE 406
L R L + G +IG+S + +++ GV V+ V G +++++++ + EG
Sbjct: 31 LSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASA 90
Query: 407 LFPAQEALLHIQTRIVDLGADK---DNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGA 462
A+ A L ++T + D + + RLL+ + +G + GR G + +++ +GA
Sbjct: 91 Y--AEVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGA 148
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
+ + S+E +P T+ +V++ G + A + A++E+ L R P + G
Sbjct: 149 RM-VASKEMLPQS---TERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYHPGAAG 204
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATS------QPSKEAAGSVSE 576
G + Q VT ++ +PS+ GS+S
Sbjct: 205 DAGV-----------LAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSR--GGSISG 251
Query: 577 TVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGAS 636
+ R + P V P T + +P V +I + + +T +SG+
Sbjct: 252 PSGVSGERRPSEGPQVNLNDP----NLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSR 307
Query: 637 VSLVE-GQPEGTQKIIQISGTPEQVERAQSVL 667
+S+ + E +++ I GTPE ERA +L
Sbjct: 308 ISIAKVPHDETGERMFTIQGTPEATERALMLL 339
>gi|395536709|ref|XP_003770354.1| PREDICTED: uncharacterized protein LOC100914843 [Sarcophilus
harrisii]
Length = 1087
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 326 GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD 385
G ++ A+ S P E V + P VG +IG+ ++ L G +K+A
Sbjct: 889 GAVLDPKASEAPPSSGPMVPEQEVVYLFIPTQAVGAIIGKKGHHIKQLARFAGASIKIAP 948
Query: 386 PVDG--SDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEI 443
P +G + E+++ I+ GP + F AQ + ++ + + VPSS
Sbjct: 949 P-EGPEASERMVIIT---GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLKAHIRVPSSAA 1004
Query: 444 GCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE-LVQIVGEIQAARDALVEVTT 501
G + G+ G +++E+ T A + I+ R++ P DE +V+I+G A++ A
Sbjct: 1005 GRVIGKGGKTVNELHNLTSAEV-IVPRDQTP---DENDEVIVKIIGHFFASQTA----QR 1056
Query: 502 RLRSYLYRDFFQKETPPSSTGPTGSA 527
++R + + Q++ P GP+ A
Sbjct: 1057 KIREIVQQAKQQEQKHPQGAGPSAPA 1082
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 347 DLVFRMLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
D R+L P VG +IG+ ++ L Q + VD+ + S++ + +S EG
Sbjct: 532 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGAS 591
Query: 405 DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGAN 463
+ A +L I + D + I ++L +S +G L G++G +L ++ + TG
Sbjct: 592 E----ACRMILEIMQKEADETKAVEEI-PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTK 646
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
I I +++ + + + + G I+A A VE+ +LR D
Sbjct: 647 ITISPLQDL--TIYNPERTITVKGPIEACSSAEVEIMRKLREAFENDM 692
>gi|355567401|gb|EHH23742.1| hypothetical protein EGK_07278, partial [Macaca mulatta]
gi|355752991|gb|EHH57037.1| hypothetical protein EGM_06596, partial [Macaca fascicularis]
Length = 544
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 134 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 192
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 193 ----------VQQAREMVLEIIREKDQADFRGVRGDFSSRVGGG---------------S 227
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 228 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 281
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 282 CQHAAHIISELILTAQERD 300
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 27 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 86
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 87 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 140
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 141 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 195
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V + V ++EV +P +AV +I ++ ++ +
Sbjct: 196 AREMVLEIIREKDQADFRGVRGDFSS----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKI 251
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 252 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 300
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR 133
+ + +++ +I + + G +IGK G IK ++ +GA I V + D S TR
Sbjct: 135 TYLGSSSKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPN-----SPTRM 189
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
+ G + A++ LI + + E+D GG G F G G
Sbjct: 190 VELMGNPDQIAKAEQ---LISEVLAEADVGGS-------------GTVSRRFTGQGGSEH 233
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
M + VG ++GKGG I+ M+ T +I+++P LP + ++ V + G
Sbjct: 234 FVMKIPNNKVGLVIGKGGDSIKNMQARTGARIQVIPL--HLPPGDTSTDRNVHIEGTSEQ 291
Query: 254 VKNAVAIISSRLRE 267
++ A +++ + E
Sbjct: 292 IELAKQLVNEAISE 305
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 153/392 (39%), Gaps = 63/392 (16%)
Query: 292 YVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFR 351
Y+P + PS G R N GP SG S GA P S D+ R
Sbjct: 125 YIPDETASPEAPSAGGRR------SFNTRGPPRSG-SPSLGARPKVQS-------DIPLR 170
Query: 352 MLCPIDKVGRVIGESEGIVELL--QNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
ML P VG +IG+ + L Q +D+ + +++ I S+ EG +
Sbjct: 171 MLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSN---- 226
Query: 410 AQEALLHI-QTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
A ++ I Q +D ++ I ++LV ++ +G L G++G +L ++ + TG I I
Sbjct: 227 ACRTIMDIMQKEAIDTKFTEE--IPLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITIS 284
Query: 468 SREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF----FQKETPP----S 519
S +++ + + + + G I+A A EV ++R D Q P +
Sbjct: 285 SLQDL--TLYNPERTITVKGSIEACGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNLN 342
Query: 520 STG--PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATSQPSKEAAGSVSET 577
+ G P+GS + + S + A + P + S + AGS
Sbjct: 343 ALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLWASMMSASGQTLAGS---- 398
Query: 578 VKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASV 637
ESE T+ + +P AV +I K + + S +GAS+
Sbjct: 399 ---PESE--------------------TVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASI 435
Query: 638 SLVEGQPEGTQKIIQISGTPEQVERAQSVLQG 669
+ +++ I G PE +AQ + G
Sbjct: 436 KASRKGMDPKHRMVIIVGPPEAQFKAQCRIFG 467
>gi|414586732|tpg|DAA37303.1| TPA: hypothetical protein ZEAMMB73_623211 [Zea mays]
Length = 322
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQ 411
ML P KVG +IG V L E +++ EQ + I E D+ L PA
Sbjct: 1 MLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGREQLDEPLPPAM 60
Query: 412 EALLHIQTRIVD---LGADKDNIITTRLLVPSSEIGCLEGRDGSL-SEMRRSTGANIQIL 467
+ALL + + ++ L DN+I ++L PS + L G G + + + ++ I++L
Sbjct: 61 DALLRVYQQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTVIRVL 120
Query: 468 SRE 470
E
Sbjct: 121 GNE 123
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 156/391 (39%), Gaps = 79/391 (20%)
Query: 51 NIMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGA 110
+I +N IN++ A DP+ VT R L +AG +IGK G + IR+ TG
Sbjct: 16 SIRSNGLPINSTGAGA-----DPTSNVT--LRSLVSTKEAGVIIGKGGKTVAEIREQTGT 68
Query: 111 WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEE 170
V + + G +R++ +S EG ++S +A+ + + +D
Sbjct: 69 KAGVSKAVQGVHDRVLSVSGGL----EGVSKAYSIVADAIL--QNPLAATDPSLTVPPPT 122
Query: 171 EEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR 230
A R++VS +G ++G+ G I++ ++ + +R++
Sbjct: 123 ATTT------------------AIRVLVSHNLMGSIIGRQGSKIKE--IQDISGVRMVAS 162
Query: 231 DHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGR-LHSPDRFFPD 289
LP+ +E +V+V G ++ A+ I L E R HG L+ P PD
Sbjct: 163 KEMLPQS---TERVVEVQGSPEAIRVAIHEIGKCLMEDWER----AHGTVLYQPGALGPD 215
Query: 290 DDYVPH----------------MNNTARR-----PS-------MDGARFSGSNYRSNN-- 319
+ N ARR PS + G R Y SN
Sbjct: 216 GVTAAYPGGVLAGGFGVGGQGYGNGGARRAGSGVPSGGHMAGDLPGRRPHNGTYHSNGNE 275
Query: 320 YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGV 379
G R S+ + AP++D + +++ P D VG +IG+ + ++ G
Sbjct: 276 NGHRSRENSLASAPAPVADRL--LRTQNISI----PADMVGCIIGKGGAKINEIRRMSGS 329
Query: 380 DLKVAD-PVDGSDEQIITIS-SEEGPDDELF 408
+ +A P D + E++ TI+ S E + LF
Sbjct: 330 RISIAKTPHDDTGERMFTITGSSEANEKALF 360
>gi|383873059|ref|NP_001244672.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|380787701|gb|AFE65726.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|383414151|gb|AFH30289.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|384950158|gb|AFI38684.1| far upstream element-binding protein 3 [Macaca mulatta]
Length = 572
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 220
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 221 ----------VQQAREMVLEIIREKDQADFRGVRGDFSSRVGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 310 CQHAAHIISELILTAQERD 328
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 55 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 114
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 115 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 168
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 169 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 223
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V + V ++EV +P +AV +I ++ ++ +
Sbjct: 224 AREMVLEIIREKDQADFRGVRGDFSS----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 280 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 14/157 (8%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE--QIITISSEEGPD- 404
+ FR+L +K G VIG+ ++ L++E + + D G D QI+ S E G D
Sbjct: 9 VTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDS-SGPDRVLQIVANSRENGLDI 67
Query: 405 -DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGA 462
EL P L+ + G T +LV +S++G + GR GS + E+R+ST
Sbjct: 68 IKELIP----LIREEVSPFSDGEADPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQSTET 123
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+++L +E +P T+ VQI G A A+ E+
Sbjct: 124 KVKVL-QECLPYS---TERRVQINGAPDAVLLAIGEI 156
>gi|332833136|ref|XP_520317.3| PREDICTED: far upstream element-binding protein 3 [Pan troglodytes]
gi|397503629|ref|XP_003822422.1| PREDICTED: far upstream element-binding protein 3 [Pan paniscus]
gi|410219718|gb|JAA07078.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410292988|gb|JAA25094.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410350985|gb|JAA42096.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
Length = 572
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 220
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 221 ----------VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 310 CQHAAHIISELILTAQERD 328
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 55 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 114
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 115 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 168
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 169 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 223
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V N + ++EV +P +AV +I ++ ++ +
Sbjct: 224 AREMVLEIIREKDQADFRGVRGDFNS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 280 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
>gi|9665104|gb|AAF97295.1|AC010164_17 Hypothetical protein [Arabidopsis thaliana]
Length = 389
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH---ELIPGDEERIIEISDTRRR 134
+TT RI K G +IGK G +++ ++ ++GA I + E P R +EI
Sbjct: 209 STTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEI------ 262
Query: 135 DPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
+ + S ++A LI+ I E + GG V RG ++
Sbjct: 263 -----IGTVSCIEKAEKLINAVIAEVEAGG---------------VPALAARGVPEQMEI 302
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+ V VG ++G+GG+ I+ M+ +++ +I+++P++ + E V++ GD +
Sbjct: 303 K--VPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEGD----ASKERTVRISGDKRQI 356
Query: 255 KNAVAII 261
A A+I
Sbjct: 357 DIATALI 363
>gi|402896286|ref|XP_003911235.1| PREDICTED: far upstream element-binding protein 3 [Papio anubis]
Length = 572
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 220
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 221 ----------VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 310 CQHAAHIISELILTAQERD 328
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 55 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 114
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 115 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 168
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 169 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 223
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V N + ++EV +P +AV +I ++ ++ +
Sbjct: 224 AREMVLEIIREKDQADFRGVRGDFNS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 280 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 597 PLPLVTRSTLE---VVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQI 653
P+P + + +E V +PD +I K + + R E SGA + + + G +II I
Sbjct: 361 PIPAMQTTQVETTDVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITI 420
Query: 654 SGTPEQVERAQSVLQGFILSTQ 675
SGT EQ++ AQ +LQ + +++
Sbjct: 421 SGTREQIQAAQYLLQQCVRTSE 442
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERII 126
++L H+ AG VIG+ GS IK +R+ TGA + V P ERI+
Sbjct: 222 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIV 267
>gi|1575609|gb|AAC50893.1| FUSE binding protein 3, partial [Homo sapiens]
Length = 600
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 190 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 248
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G G+ GGG +
Sbjct: 249 ----------VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGG---------------S 283
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 284 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 337
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 338 CQHAAHIISELILTAQERD 356
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 83 VQKRPLDDGVGNQLGALDHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 142
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 143 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEIL 196
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 197 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 251
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V N + ++EV +P +AV +I ++ ++ +
Sbjct: 252 AREMVLEIIREKDQADFRGVRGDFNS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKI 307
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 308 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 356
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 66 ANSNPKDP-SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER 124
A++NP P S M+ I+ D A +IGK G+ + IR+ +GA + V E IPG+ ER
Sbjct: 46 ASTNPNAPASAMIHMRCLIVTQD--ASIIIGKGGTHVNEIREKSGARVVVSESIPGNPER 103
Query: 125 IIEIS 129
I+ +S
Sbjct: 104 ILNVS 108
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
T + + + + G VIGK GS IK I+ +GA +N E ++PG ER++ ++
Sbjct: 140 AVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVA 192
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 61 NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIP 119
SN+++N+ P T R++ + G +IGK G+ IK IR+ +GA + V E +P
Sbjct: 97 KSNSKSNTTPP-------VTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFLP 149
Query: 120 GDEERIIEISDT 131
G ER + +S T
Sbjct: 150 GSSERAVTLSGT 161
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 136/344 (39%), Gaps = 47/344 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+A ++ +LE G +G GG + R+++S
Sbjct: 100 --PLQGTSKAYSIVAKSLLE----------------GAPQMGMGGVVQNNGTHSVRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 142 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 196
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R L++P + T PS G+ S S R+ N
Sbjct: 197 EIGKCLIDDWQRGTGTV---LYNPAVRASVGSSSGQGSVTGTNPSYGGS--SRSYNRTGN 251
Query: 320 ---YGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGIVEL 372
+ PS YS G + P ED + P D VG +IG +
Sbjct: 252 GADFSDHPSSYS-RRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISE 310
Query: 373 LQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEAL 414
++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 311 IRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENL 354
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR G+ +SE+RRS+GA I I + P +G + + I
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDTG-ERMFTI 336
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G QA AL + L + R Q+
Sbjct: 337 MGSAQANEKALYLLYENLEAEKMRRSQQQ 365
>gi|355753971|gb|EHH57936.1| hypothetical protein EGM_07682 [Macaca fascicularis]
Length = 532
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 229 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTL----YNPERTITV 284
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 285 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 324
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 325 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 380
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 381 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 437
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE---- 481
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P DE
Sbjct: 438 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQV 490
Query: 482 LVQIVGEIQAA-------RDALVEV 499
+V+I+G A+ RD L +V
Sbjct: 491 IVKIIGHFYASQMAQRKIRDILAQV 515
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 317 SNNYGPRPSGYSIEAGAAPMSD-----SVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVE 371
S Y P P ++ + PM++ + P Y + FRM CP+ + VIG+ ++
Sbjct: 169 SQAYDPVPFANHLDYTSRPMANHQAERELDPTY---VSFRMYCPVKEASFVIGKRGDMIN 225
Query: 372 LLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI 431
L+ + ++V++ + E+II + +GP + + +A I I++ D+
Sbjct: 226 HLREKANARIQVSENIKDVQERIILV---KGPAENV---AKAFGLITRAILEEPEDEPAS 279
Query: 432 ITTR-----LLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
I +R +L+P +G + G+ GS E+ ++ A ++ + + +P + TD ++ +
Sbjct: 280 IMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQPLP---NSTDRVLSV 335
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G A A+ ++ + ++D +K
Sbjct: 336 LGVGDAIHIAIYYISQVIIE--HKDILKK 362
>gi|397603279|gb|EJK58384.1| hypothetical protein THAOC_21490 [Thalassiosira oceanica]
Length = 689
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 33/180 (18%)
Query: 52 IMNNNTSINNSNNRANSNPKDPSLMVTTTYRILCH--DMKAGGVIGKSGSIIKSIRQHTG 109
+ +N+ SI + NN + + + + C D G VIGK G IK I++ +G
Sbjct: 289 VQSNSISIGSGNNATSQMAQLQKALAEGQAHVTCKVPDADVGLVIGKGGMQIKLIQEKSG 348
Query: 110 AWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGE 169
A I + ++ D + ++ T ++ EG A+ A +I + + +
Sbjct: 349 ANIQIPQMADTDNPAMRTVNIT-HQNKEG-------AEFAKTMIEEVL-----------K 389
Query: 170 EEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP 229
E+ + GGGG V ++ VG ++G+GG +I+QM+ T+ +I+I P
Sbjct: 390 EKAQSGGGG------------DVTIQVNCPDRDVGMIIGRGGCVIKQMQNTTRCRIQIPP 437
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ D
Sbjct: 278 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 333
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 334 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFSSRMGGG---------------S 371
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 372 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 425
Query: 254 VKNAVAIISSRLRESQHRD 272
++A II+ + +Q RD
Sbjct: 426 CQHAAHIINELILTAQERD 444
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 35/332 (10%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSE-EGPDDE 406
L R L + G +IG+S + +++ GV V+ V G +++++++ + EG
Sbjct: 31 LSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASA 90
Query: 407 LFPAQEALLHIQTRIVDLGADK---DNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGA 462
A+ A L ++T + D + + RLL+ + +G + GR G + +++ +GA
Sbjct: 91 Y--AEVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGA 148
Query: 463 NIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTG 522
+ + S+E +P T+ +V++ G + A + A++E+ L R P + G
Sbjct: 149 RM-VASKEMLPQS---TERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYHPGAAG 204
Query: 523 PTGSALVVEAASPIDITPAREVQTVTDPPAATHQSVQIPATS------QPSKEAAGSVSE 576
G + Q VT ++ +PS+ GS+S
Sbjct: 205 DAGV-----------LAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSR--GGSISG 251
Query: 577 TVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGAS 636
+ R + P V P T + +P V +I + + +T +SG+
Sbjct: 252 PSGVSGERRPSEGPQVNLNDP----NLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSR 307
Query: 637 VSLVE-GQPEGTQKIIQISGTPEQVERAQSVL 667
+S+ + E +++ I GTPE ERA +L
Sbjct: 308 ISIAKVPHDETGERMFTIQGTPEATERALMLL 339
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
T R + + + G VIGK+GS IK I+ +GA + E L+PG ER++ IS
Sbjct: 188 AVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEALLPGSTERVLSIS 240
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFASRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +I+ + +Q RD
Sbjct: 310 CQHAAHVINELILTAQERD 328
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQ-NESERREDVP 590
+ ++ + D P T + T P K +A V E +++ ++++ R
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 591 TVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKI 650
+R+ ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFASRM-----GGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERA 300
Query: 651 IQISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 301 AQVMGPPDRCQHAAHVINELILTAQERD 328
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTVQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D RS F R+
Sbjct: 223 QAREMVLEIIREKDQADFRGIRSDFTSRM 251
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G + GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGIRSDFTSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A II+ + +Q RD
Sbjct: 310 CQHAAHIINELILTAQERD 328
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 SNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPG 120
SN+ A S P T R++ + G +IGK GS IK IR+ TGA + V +++P
Sbjct: 61 SNSPATSKPP-------VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 113
Query: 121 DEERIIEISDT 131
ER + IS T
Sbjct: 114 STERAVTISGT 124
>gi|114666312|ref|XP_001172661.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Pan troglodytes]
gi|397477450|ref|XP_003810083.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Pan paniscus]
Length = 438
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 44/321 (13%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P +V+I
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENDQVIVKI 400
Query: 486 VGEIQAA-------RDALVEV 499
+G A+ RD L +V
Sbjct: 401 IGHFYASQMAQRKIRDILAQV 421
>gi|297272500|ref|XP_002800442.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Macaca mulatta]
Length = 438
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE---- 481
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P DE
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQV 396
Query: 482 LVQIVGEIQAA-------RDALVEV 499
+V+I+G A+ RD L +V
Sbjct: 397 IVKIIGHFYASQMAQRKIRDILAQV 421
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + I E D + G G GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKD-----QADFRSVRGDFGSRMGGG--------SIE 257
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G + +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A IIS + +Q RD
Sbjct: 312 HAAHIISELILTAQERD 328
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G F+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPSFHNDVD-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGTDKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D R F R+
Sbjct: 223 QAREMVLEIIREKDQADFRSVRGDFGSRM 251
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFNARVGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +I+ + +Q RD
Sbjct: 310 CQHAAHVINELILTAQERD 328
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
N V ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFNA----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHVINELILTAQERD 328
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 356 IDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALL 415
+ +VG +IG+ V+ ++ E G + +++ S E+I+TI+ G + +F +
Sbjct: 5 LQEVGSIIGKKGETVKKIREESGARINISE--GSSPERIVTIT---GATEAIFRTFAMIA 59
Query: 416 HIQTRIVDLGADKDNI-----ITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
++ N+ +T RL+ P S+ G L G+ GS + E+R +TGA +Q+
Sbjct: 60 QKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV 116
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 59 INNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-EL 117
IN + + +N K P T R++ + G +IGK GS IK IR+ TGA + V ++
Sbjct: 66 INAAMSNSNVTSKPP-----VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDM 120
Query: 118 IPGDEERIIEISDT 131
+P ER + IS T
Sbjct: 121 LPDSTERAVTISGT 134
>gi|238624257|ref|NP_001153895.1| insulin-like growth factor 2 mRNA-binding protein 1 isoform 2 [Homo
sapiens]
gi|332259444|ref|XP_003278799.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Nomascus leucogenys]
gi|390463565|ref|XP_003733060.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Callithrix jacchus]
gi|395756618|ref|XP_003780155.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Pongo abelii]
gi|402899535|ref|XP_003912750.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Papio anubis]
gi|78523098|gb|ABB46294.1| IGF2 mRNA-binding protein 1 isoform [Homo sapiens]
Length = 438
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE---- 481
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P DE
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQV 396
Query: 482 LVQIVGEIQAA-------RDALVEV 499
+V+I+G A+ RD L +V
Sbjct: 397 IVKIIGHFYASQMAQRKIRDILAQV 421
>gi|344285915|ref|XP_003414705.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Loxodonta africana]
Length = 438
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 44/321 (13%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P +V+I
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENDQVIVKI 400
Query: 486 VGEIQAA-------RDALVEV 499
+G A+ RD L +V
Sbjct: 401 IGHFYASQMAQRKIRDILAQV 421
>gi|194377024|dbj|BAG63073.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDPEGRM 140
I+ KAG VIGK G IK +++ G + + + P + ++ + I+ DP
Sbjct: 189 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG----DPY--- 241
Query: 141 PSFSPAQEALF-LIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A+E + LI D+ GGF E EYG R GGN + +
Sbjct: 242 -KVQQAKEMVLELIRDQ-------GGFR-EVRNEYGS---------RIGGNE-GIDVPIP 282
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I++++ + +I+ P D + P E I Q+ G + ++A
Sbjct: 283 RFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP------ERIAQITGPPDRCQHAAE 336
Query: 260 IISSRLRESQ 269
II+ LR Q
Sbjct: 337 IITDLLRSVQ 346
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 75 LMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
L R+L H +AG +IG++G IK +R+ T A I V+ E +PG ER++ ++
Sbjct: 121 LNFNCELRMLVHQSQAGCIIGRAGFKIKELREQTEANIKVYSECMPGSTERVVALT 176
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 350 FRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFP 409
R+L G +IG+ ++ L++E + V D E+I+TIS++ L
Sbjct: 45 LRILLQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCT--GPERILTISAD------LNT 96
Query: 410 AQEALLHIQTRIVDLGA------DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGA 462
A LL I + D D + R+LV S+ GC+ GR G + E+R T A
Sbjct: 97 ACACLLDIIPVLEDYQKHYQEHKDLNFNCELRMLVHQSQAGCIIGRAGFKIKELREQTEA 156
Query: 463 NIQILSREEVPACVSG-TDELVQIVGEIQAARDALVEVTTRLRS------------YLYR 509
NI++ S C+ G T+ +V + G+ + A+ ++ L+ ++Y
Sbjct: 157 NIKVYSE-----CMPGSTERVVALTGKPEKCVGAIKKIIELLQKAPIKGQNIPYDPFMYD 211
Query: 510 DFFQKE 515
+F+ E
Sbjct: 212 EFYAAE 217
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEE 243
GF GGN +T++ + + G ++G+GG I +R ++ QI+I D LP ++
Sbjct: 400 GFGTGGNITSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKI---DEPLP---GSTDR 453
Query: 244 IVQVVGDINNVKNAVAII 261
I+ + GD + ++NA ++
Sbjct: 454 IITISGDNDQIRNAQFLL 471
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 90 AGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
AG +IG+ GS I++IR+ + A I + E +PG +RII IS
Sbjct: 419 AGSIIGRGGSRIRTIRERSEAQIKIDEPLPGSTDRIITIS 458
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFSARVGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +I+ + +Q RD
Sbjct: 310 CQHAAHVINELILTAQERD 328
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ V ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFSA----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHVINELILTAQERD 328
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T +L K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFASRAGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A II+ + +Q RD
Sbjct: 310 CQHAAHIINELILTAQERD 328
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 LLIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 291 DYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVF 350
D +PH+NN+ P +D PS Y P+ D V G +
Sbjct: 34 DSIPHLNNST--PLVD-----------------PSVYGYGVQKRPLDDGVGNQLGALVHQ 74
Query: 351 RML------CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPD 404
R + P VG +IG + +Q E G +++A G E+ ++ G
Sbjct: 75 RAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT---GTP 131
Query: 405 DELFPAQEALLHIQTRIVD---LGADKD-NIITTRLLVPSSEIGCLEGRDG-SLSEMRRS 459
+ + A+ L I R + D D N LL+P+S++G + G+ G ++ +++
Sbjct: 132 ESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQER 191
Query: 460 TGANIQILSREEVPACVSGTDELVQIVGE---IQAARDALVEV 499
TG + ++ +P +G D+ ++I G+ +Q AR+ ++E+
Sbjct: 192 TGVKMVMIQDGPLP---TGADKPLRITGDPFKVQQAREMVLEI 231
>gi|403279508|ref|XP_003931290.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Saimiri boliviensis boliviensis]
Length = 438
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE---- 481
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P DE
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQV 396
Query: 482 LVQIVGEIQAA-------RDALVEV 499
+V+I+G A+ RD L +V
Sbjct: 397 IVKIIGHFYASQMAQRKIRDILAQV 421
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 LLIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 39/238 (16%)
Query: 276 FHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAP 335
F LH + D +PH+NN+ P +D PS Y P
Sbjct: 19 FVDALHRVRQIAAKIDSIPHLNNST--PLVD-----------------PSVYGYGVQKRP 59
Query: 336 MSDSVQPFYGEDLVFRML------CPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG 389
+ D V G + R + P VG +IG + +Q E G +++A G
Sbjct: 60 LDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSG 119
Query: 390 SDEQIITISSEEGPDDELFPAQEALLHIQTRIVD---LGADKD-NIITTRLLVPSSEIGC 445
E+ ++ G + + A+ L I R + D D N LL+P+S++G
Sbjct: 120 IPERPCVLT---GTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGL 176
Query: 446 LEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGE---IQAARDALVEV 499
+ G+ G ++ +++ TG + ++ +P +G D+ ++I G+ +Q AR+ ++E+
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLP---TGADKPLRITGDPFKVQQAREMVLEI 231
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T +L K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + I E D F G + R GG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKD-QADFRGVRSDFTS----------RAGGGSI--E 257
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ V R VG ++G+ G++I++++ T +I+ P D P E QV+G + +
Sbjct: 258 VSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQFKPDDGISP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A II+ + +Q R+
Sbjct: 312 HAARIINELILTAQERE 328
>gi|380012793|ref|XP_003690459.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Apis
florea]
Length = 443
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
I R+LV S+ GC+ G+ G + E+R TGA I+I S C TD L+ I G+
Sbjct: 120 IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPT 175
Query: 491 AARDALVEVTTRLRS 505
+ + E+ +++
Sbjct: 176 TCIECIRELIATIKT 190
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 184 GFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPR--DHSLPRCVSMS 241
G R G + + RM+V + GC++GKGG I+++R +T +I+I HS R +S+
Sbjct: 112 GSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISIC 171
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
R+L H +AG +IGK G IK +R+ TGA I ++ P +R+I I
Sbjct: 123 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISIC 171
>gi|335297828|ref|XP_003358129.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Sus scrofa]
gi|338710921|ref|XP_003362445.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Equus caballus]
gi|345805511|ref|XP_003435309.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Canis lupus familiaris]
gi|410980811|ref|XP_003996769.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Felis catus]
Length = 438
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 44/321 (13%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 135 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 190
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 191 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 230
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 231 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 286
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 287 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 343
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P +V+I
Sbjct: 344 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPD--ENDQVIVKI 400
Query: 486 VGEIQAA-------RDALVEV 499
+G A+ RD L +V
Sbjct: 401 IGHFYASQMAQRKIRDILAQV 421
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDP 136
T IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP
Sbjct: 150 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----DP 205
Query: 137 EGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVAT 194
F Q+A ++ + I E D G G+ GGG +
Sbjct: 206 ------FK-VQQAREMVLEIIREKDQADFRGVRGDFSSRLGGG---------------SI 243
Query: 195 RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNV 254
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 244 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSP------ERAAQVMGPPDRC 297
Query: 255 KNAVAIISSRLRESQHRD 272
++A II+ + +Q RD
Sbjct: 298 QHAAHIINELILTAQERD 315
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 64 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 117
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 118 PE----SIEQAKRLLGQIVDR---CRNGPGFHNDVD-----------------GNNTIQE 153
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 154 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 209
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D R F RL
Sbjct: 210 QAREMVLEIIREKDQADFRGVRGDFSSRL 238
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 64 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 119
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 120 --SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVG-----LVIGKGGETI 172
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 173 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 232
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 233 DFSS----RLGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAA 288
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 289 QVMGPPDRCQHAAHIINELILTAQERD 315
>gi|47219921|emb|CAF97191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 307 GARFSGSNYRSN-NYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGE 365
G RFS S+Y S+ + PR S +A S G + ++ P D G +IG+
Sbjct: 231 GDRFSHSSYHSSMDERPRLMTPSPSHCSAGSRGSYSDIGGPVITTQVTIPKDLAGSIIGK 290
Query: 366 SEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
++ +++E G +K+ +P++GS+++IITI+ G D++ AQ L
Sbjct: 291 GGQRIKQIRHECGASIKIDEPLEGSEDRIITIT---GTQDQIQNAQYLL 336
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 77 VTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
V TT + D+ AG +IGK G IK IR GA I + E + G E+RII I+ T+
Sbjct: 272 VITTQVTIPKDL-AGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQ 326
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T I K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 134 STVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 189
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 190 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFSSRMGGG---------------S 227
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 228 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 281
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +IS + +Q RD
Sbjct: 282 CQHAAHVISELILTAQERD 300
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 49 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 102
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 103 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNSTVQE 138
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ + VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 139 IPIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 194
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 195 QAREMVLEIIRE---KDQADFRG 214
>gi|432857879|ref|XP_004068771.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 453
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 3 RSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSINNS 62
R R R + H D D + K NH++Q + + NI++ + N
Sbjct: 20 RLRMGRTLTFQH---DNDPKHKAK-STNHWFQQKEGKVLEWPSQSPDLNIIDLTALVAN- 74
Query: 63 NNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGD 121
+N P T R++ + G +IGK GS IK IR+ TGA + V +L+P
Sbjct: 75 GTVSNKPP--------VTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNS 126
Query: 122 EERIIEIS 129
ER + IS
Sbjct: 127 TEREVTIS 134
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T I K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFSSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +IS + +Q RD
Sbjct: 310 CQHAAHVISELILTAQERD 328
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNSTVQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ + VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 IPIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK G + +R TG V +++ G +R++ I+ G
Sbjct: 47 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTIT--------GG 98
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S A ++ +LE G VG GG G ++++S
Sbjct: 99 CDAIS---RAYAIVARALLE----------------GAPAVGMGGIVQGNGTHPIKLLIS 139
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ A+
Sbjct: 140 HNQMGTIIGRQGLKIKH--IQDTSGVRMVAQKEMLPQS---TERVVEVQGTPEGIQRAIW 194
Query: 260 IISSRLRESQHR 271
IS L + R
Sbjct: 195 EISKCLVDDWQR 206
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 164/428 (38%), Gaps = 78/428 (18%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
R+L G +IG+ GS I+ I Q + A ++VH D +E + T +P+
Sbjct: 142 RLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHR---KDNVGSLEKAITIYGNPDNCTN 198
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ RILE ++E G + +++
Sbjct: 199 ACK-----------RILEV--------MQQEANNTNKG-----------EICLKILAHNN 228
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ ET T+I + S+ S + E I+ V G I N+ A +
Sbjct: 229 LIGRIIGKGGNTIKRIMQETDTKITV----SSINDINSFNLERIITVKGTIENMAKAESQ 284
Query: 261 ISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN- 319
IS++LR+S D P P ++ A + G F G+
Sbjct: 285 ISAKLRQSYENDL----------QVLAPQSIMFPGLHPMAMMST--GRGFCGAPPPFPPP 332
Query: 320 -YGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES----EGIVELLQ 374
Y P DS + Y + P + VG +IG I+
Sbjct: 333 IYAPLAGQ---GGAQQGAGDSQETTY-------LYIPNNAVGAIIGTKGSHIRNIIRFSN 382
Query: 375 NEIGV-----DLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKD 429
+ + D + V E+ +TI G + + AQ + + D
Sbjct: 383 ASVKIAPLEQDKVIEGSVAAQQERKVTIV---GSPEAQWKAQYLIFEKMREEGFMSGSDD 439
Query: 430 NIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE--LVQIV 486
+T ++V SS++G + G+ G ++ E++R TG+ I+ L + P +G D V IV
Sbjct: 440 VRLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIK-LPEQPQPPTAAGNDHETTVHIV 498
Query: 487 GEIQAARD 494
G + ++
Sbjct: 499 GHFYSVQE 506
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 163 STVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITG----D 218
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P Q+A L+ + I E D G + GGG +
Sbjct: 219 P-------FKVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGG---------------S 256
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E + QV+G +
Sbjct: 257 VEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGLSP------ERVAQVMGLPDR 310
Query: 254 VKNAVAIISSRLRESQHRD 272
++A II+ + +Q RD
Sbjct: 311 CQHAAHIINELILTAQERD 329
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 87 DMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPA 146
D G +IG+ G I I+ +G I + G ER ++ T PE S A
Sbjct: 87 DKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGT----PE----SIEQA 138
Query: 147 QEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCL 206
+ L I DR G GF+ + + G+ +++ VG +
Sbjct: 139 KRLLGQIVDRCRN---GPGFHNDMD-----------------GSSTVQEILIPASKVGLV 178
Query: 207 LGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLR 266
+GKGG+ I+Q++ T ++ I+ +D LP + +++ +++ GD V+ A ++ +R
Sbjct: 179 IGKGGETIKQLQERTGVKM-IMIQDGPLP---TGADKPLRITGDPFKVQQARDLVLEIIR 234
Query: 267 ESQHRD----RSHFHGRL 280
E D RS F R+
Sbjct: 235 EKDQADFRGIRSDFSSRI 252
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A +A ++ +LE G +G GG R+++S
Sbjct: 97 --PLQGAAKAYAIVAKSLLE----------------GAPQLGMGGVVSNNGTHPVRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 193
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 194 EIGKCLIDDWQR 205
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I
Sbjct: 278 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISI 318
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A +A ++ +LE G +G GG R+++S
Sbjct: 97 --PLQGAAKAYAIVAKSLLE----------------GAPQLGMGGVVSNNGTHPVRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 193
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 194 EIGKCLIDDWQR 205
>gi|47223565|emb|CAF99174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 561
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV--HELIPGDEERIIEISDTRRRDPEGR 139
+IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP+
Sbjct: 170 QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITG----DPQ-- 223
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
Q+A L+ I + D G G + G + GG+ + +VV
Sbjct: 224 -----KVQQARELVVKLIRDKDQGDFRVGRADF-----------GSKMGGSTLD--VVVP 265
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
R VG ++G+ G++I +++ + +I+ D P + + QV+G ++ +AV
Sbjct: 266 RFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISP------DRVAQVMGQPDHCHHAVH 319
Query: 260 IISSRLRESQHRD 272
II+ ++ +Q RD
Sbjct: 320 IINELVQTAQERD 332
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 46 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 96
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A +A ++ +LE G +G GG R+++S
Sbjct: 97 --PLQGAAKAYAIVAKSLLE----------------GAPQLGMGGVVSNNGTHPVRLLIS 138
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 139 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 193
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 194 EIGKCLIDDWQR 205
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I
Sbjct: 278 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISI 318
>gi|351713497|gb|EHB16416.1| Far upstream element-binding protein 2, partial [Heterocephalus
glaber]
Length = 522
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 132
P VT YR+ D G +IG+ G I I+Q +G + + G ER + ++
Sbjct: 59 PRTSVTEEYRV--PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGA- 115
Query: 133 RRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRV 192
PE Q+A ++ D + S G GG G+ + GG V
Sbjct: 116 ---PES-------VQKAKMMLDDIV--SRGRGGPPGQFHDSANGGQN----------GTV 153
Query: 193 ATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDIN 252
+++ G ++GKGG+ I+Q++ ++ IL +D S V ++ ++++GD
Sbjct: 154 QEEIMIPAGKAGLVIGKGGETIKQLQERAGVKM-ILIQDGSQNTNV---DKPLRIIGDPY 209
Query: 253 NVKNAVAIISSRLRESQHRDRSHFHGR 279
V+ A ++ LRE RD+ F R
Sbjct: 210 KVQQACEMVMDILRE---RDQGGFGDR 233
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD----TRR 133
T I+ KAG VIGK G IK +++ G ++I I D T
Sbjct: 152 TVQEEIMIPAGKAGLVIGKGGETIKQLQERAGV-------------KMILIQDGSQNTNV 198
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P + Q+A ++ D + E D GG +G+ E G +GGG
Sbjct: 199 DKPLRIIGDPYKVQQACEMVMDILRERDQGG--FGDRNEY---GSRIGGG---------- 243
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ D + P E+I ++G +
Sbjct: 244 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP------EKIAHIMGPPDR 297
Query: 254 VKNAVAIISSRLR 266
++A II+ L+
Sbjct: 298 CEHAARIINDLLQ 310
>gi|340515764|gb|EGR46016.1| predicted protein [Trichoderma reesei QM6a]
Length = 559
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 40/184 (21%)
Query: 64 NRANSNPKDPSLMVTTTYR-------ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NRA P+DP+ R I+ D G +IG+ G I+ +++ +G IN+
Sbjct: 268 NRAQEKPRDPARGGAAALRDGEDHMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINI-- 325
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESD--GGGGFYGEEE--- 171
+ E P + S A A I + I++SD G G G ++
Sbjct: 326 --------VGESKSVNGLRPVNLIGSREAAARAKDFIME-IVDSDSRGDGPASGTKKPAG 376
Query: 172 --------EEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKT 223
+YGGGGG +++ + V VG ++GKGG+ I +M+ T
Sbjct: 377 PPRNDGPSRDYGGGGGP---------DKINDAIYVPSDAVGMIIGKGGETIREMQNSTGC 427
Query: 224 QIRI 227
+I +
Sbjct: 428 KINV 431
>gi|441623750|ref|XP_004088935.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Nomascus leucogenys]
Length = 847
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 267 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 325
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E + G G+ GGG +
Sbjct: 326 ----------VQQAREMVLEIIREKEQADFRGVRGDFTSRMGGG---------------S 360
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 361 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 414
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 415 CQHAAHIISELILTAQERD 433
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 32/192 (16%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRDPEGRM 140
IL K G VIGK G IK +++ TG + + + +P ++ + I+ DP
Sbjct: 171 ILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGADKPLRITG----DP---- 222
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
Q+A L+ + I + D G + ++G R GG+ + + V R
Sbjct: 223 ---YKVQQARELVVEIIRDKDQGD--FRASRGDFGS---------RLGGSSL--DVAVPR 266
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
VG ++G+ G++I++++ ++ +I+ P D P + I QV+G + ++AV +
Sbjct: 267 FAVGIVIGRNGEMIKKIQNDSGVRIQFKPDDGISP------DRIAQVMGQSDRCQHAVHL 320
Query: 261 ISSRLRESQHRD 272
I+ ++ +Q RD
Sbjct: 321 INELVQTAQERD 332
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + I E D + ++ G G G GG V+
Sbjct: 218 P------FK-VQQAREMVLEIIREKD---------QADFRGVRGDFGARVGGGSIEVS-- 259
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
V R VG ++G+ G++I++++ + +I+ P D P E QV+G + +
Sbjct: 260 --VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A +I+ + +Q RD
Sbjct: 312 HAAHVINELILTAQERD 328
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
V ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFGA----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHVINELILTAQERD 328
>gi|390355846|ref|XP_003728637.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Strongylocentrotus purpuratus]
Length = 345
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 346 EDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDE--QIITISSEEGP 403
+D+ FR+L +K G +I + ++ L+++ + + D G D QI+ S E G
Sbjct: 7 DDVTFRLLVSSNKAGGLIAKGGQNIKRLRSDYNATVSIPDS-SGPDRVLQIVANSKENGL 65
Query: 404 D--DELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRST 460
D +EL P L+ + G T +LV +S++G + GR G + E+R ST
Sbjct: 66 DIIEELIP----LIREEVSPFSDGEADPCTTTLSVLVQTSQVGAIIGRAGIKIKELREST 121
Query: 461 GANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEV 499
+++ +E C T+ LVQI G A A+ E+
Sbjct: 122 KTKVKVF--QECLPC--STESLVQINGTPDAVLLAIGEI 156
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T +L K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 163 STIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 218
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 219 P------FK-VQQAREMVLEIIREKDQADFRGVRGDFSSRMGGG---------------S 256
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 257 LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 310
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +I+ + +Q RD
Sbjct: 311 CQHAAHVINELILTAQERD 329
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 78 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 131
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + G+
Sbjct: 132 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GSSTIQE 167
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 168 LLIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 223
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 224 QAREMVLEIIRE---KDQADFRG 243
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 78 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 133
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 134 --SIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVG-----LVIGKGGETI 186
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 187 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 246
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + +LEV +P +AV +I ++ ++ + +G + ++
Sbjct: 247 DFSS----RMGGGSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 302
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 303 QVMGPPDRCQHAAHVINELILTAQERD 329
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 79 TTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEG 138
TT +I +M+ G +IGK G IK ++ +GA I V + D + TR D G
Sbjct: 134 TTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPN-----ATTRTVDLTG 188
Query: 139 RMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV- 197
S A++ LI D + E++ G R GG A + V
Sbjct: 189 TPDQISKAEQ---LITDVLQEAEAGNTAGSGGGGR------------RMGGQAGADQFVM 233
Query: 198 -VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKN 256
+ VG ++GKGG+ I+ M+ +T +I+++P LP E +Q+ G +++
Sbjct: 234 KIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLH--LPPGDPTPERTLQIDGITEQIEH 291
Query: 257 AVAIIS------SRLRES 268
A +++ +R+R S
Sbjct: 292 AKQLVNEIISGENRMRNS 309
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + I E D + ++ G G G GG V+
Sbjct: 218 P------FK-VQQAREMVLEIIREKD---------QADFRGVRGDFGARVGGGSIEVS-- 259
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
V R VG ++G+ G++I++++ + +I+ P D P E QV+G + +
Sbjct: 260 --VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A +I+ + +Q RD
Sbjct: 312 HAAHVINELILTAQERD 328
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
V ++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFGA----RVGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHVINELILTAQERD 328
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 163/420 (38%), Gaps = 70/420 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
RIL G +IG++G I+ I Q + A ++VH + G E++I I +PE
Sbjct: 209 RILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYG----NPEN-- 262
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
+ Q+ L ++ ++ G V +++
Sbjct: 263 -CSTACQKILEVMQQEASNTNRG---------------------------DVPLKILAHN 294
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVA 259
+G ++GK G I+++ +T T+I + SL ++ E ++ + G V A
Sbjct: 295 NLIGRIIGKSGNTIKRIMEQTDTKITV----SSLHDGSALHLERVITIKGKPEGVCRAEQ 350
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPD-------DDYVPHMNNTARRPSMDGARFSG 312
++S++LR+S D + L FP Y P R G
Sbjct: 351 LVSAKLRQSYESDLA----ALAPQSLMFPGLHPMAMMSAYPPPPPPHGPPARPPHYRGGG 406
Query: 313 SNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYG--EDLVFRMLCPIDKVGRVIGESEGIV 370
+ GY A PM + P +G E + + P VG +IG +
Sbjct: 407 GGGPYPHPPAVGGGYMGGAVHGPMGGYMSPSHGGVERELVCLYIPNTAVGAIIGTGGSSI 466
Query: 371 ELLQNEIGVDLKVA-----DPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLG 425
+ G +KVA DP D + ++ + + E + AQ + + +G
Sbjct: 467 RDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQ----WRAQSMIFNKVCYEGCMG 522
Query: 426 ADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQI------LSREEVPACVSG 478
+ D + + VPS+++G + G+ G ++ E++R T A I++ + EE P + G
Sbjct: 523 -NPDGTLRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIKLPEESQNANTEETPVHILG 581
>gi|393908932|gb|EFO19357.2| hypothetical protein LOAG_09137 [Loa loa]
Length = 265
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
++L H AG VIG+ GS IK +R+ G + V+ E P ERII+I+ + +
Sbjct: 57 KVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIVACLV 116
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG-GGGVGGGGFRGGGNR 191
S +E R ES F EYGG G GG G RG G R
Sbjct: 117 TIISTLKEIPIKGPSRPYESI---FFDPVVANEYGGYAGDHGGRGMRGYGPR 165
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 157/398 (39%), Gaps = 67/398 (16%)
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ ++ ++ ++ E+ +++ GD V+
Sbjct: 204 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPG-----QEQEKPLRITGDPQKVE 258
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+A ++ + E + + + S + F S DG SG +
Sbjct: 259 HAKQLVYELIAEKEMQLYNRGTRNFSSNNSF-----------------SQDGNSESGEDR 301
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
R N RPS Y G P + + F P +K G +IG+ ++ +
Sbjct: 302 RGNGVTGRPSEYGSWEGNRPAGEG-------KVEFSYPVPSNKCGIIIGKGGVTIKEINQ 354
Query: 376 EIGVDLKVADPVDGSD-EQIITISSEEGPDDELFPAQEALL-------------HIQTRI 421
+ G ++ G+D ++ TI G +++ A+ + R
Sbjct: 355 QTGAHCELDRRNPGTDTDKFFTI---RGTPEQVEHAKRVFAEKLGGGMGSSSNGYPTGRP 411
Query: 422 VDLGA----DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACV 476
+ G + N + VP+++ G + G+ G ++ ++ + TGA+ ++ R
Sbjct: 412 NEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNP----G 467
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI 536
+ T++ I G + A + +L + TP SS G G+ + +
Sbjct: 468 TETEKFFTIKGTPEQVEHAQRIFSEKLGN-------NGMTPASSLG-YGAQSAMGYNASW 519
Query: 537 DITPAREV---QTVTDPPAATHQSVQI-PATSQPSKEA 570
+ P + QT T P A Q+VQI P T QP A
Sbjct: 520 NAAPGYQAWPGQTATADPNAAGQAVQIDPNTGQPDYSA 557
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 137/340 (40%), Gaps = 48/340 (14%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPE 137
T T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 43 TLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG------- 95
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+A ++ +LE G +G GG R++
Sbjct: 96 ----PLQGTAKAYAIVAKGLLE----------------GAPQLGMGGVVSNTGTHPVRLL 135
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A
Sbjct: 136 ISHNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKA 190
Query: 258 VAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY-R 316
V I L + R L++P P MNN+ + G + G +Y R
Sbjct: 191 VWEIGKCLIDDWQRGTGTV---LYNP-AVRASVGGGP-MNNSLGSGTAAGG-YGGRSYNR 244
Query: 317 SNN---YGPRPSGYSIEAGAAPMSDSVQPFYGED----LVFRMLCPIDKVGRVIGESEGI 369
+ N + + GY+ + + + + P ED + P D VG +IG
Sbjct: 245 TGNGADFSDQTGGYNRRSNSDAANRGI-PLVTEDGEEVQTQNISIPSDMVGCIIGRGGSK 303
Query: 370 VELLQNEIGVDLKVAD-PVDGSDEQIITISSEEGPDDELF 408
+ ++ G + +A P D + E++ TI +++
Sbjct: 304 ISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKAL 343
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI 466
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I
Sbjct: 277 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISI 317
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
P F Q+A ++ + I E D F G G G R GG +
Sbjct: 218 P------FK-VQQAREMVLEIIREKD-QADFRGVR----------GDFGARAGGGSI--E 257
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G + +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDRCQ 311
Query: 256 NAVAIISSRLRESQHRD 272
+A +I+ + +Q RD
Sbjct: 312 HAAHVINELILTAQERD 328
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDID-----------------GNSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 ILIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 QAREMVLEIIRE---KDQADFRG 242
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 132
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 133 --SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVG-----LVIGKGGETI 185
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T P K +A V E +++ + V
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRG 245
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
++EV +P +AV +I ++ ++ + +G + ++
Sbjct: 246 DFGA----RAGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAA 301
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A V+ IL+ Q+ D
Sbjct: 302 QVMGPPDRCQHAAHVINELILTAQERD 328
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 46/225 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T RIL AG VIGK G I+ +R A ++V + ER I+IS
Sbjct: 23 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQIS---------- 70
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ L +I + + ++ E +EEY R+++
Sbjct: 71 ----TDIDSTLEIITEML-------KYFEERDEEYD------------------VRLLIH 101
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+ GC++GKGG+ I+++R + R L ++ ++ +VQ VG + V AV
Sbjct: 102 QSLAGCVIGKGGQKIKEIR--DRIGCRFLKVFSNV--APQSTDRVVQTVGKQSQVIEAVR 157
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPS 304
+ + R++ + H + ++ DR + D+ + RPS
Sbjct: 158 EVITLTRDTPIKGPIHNYDPMNF-DRVYADEYGGYGTGTGSTRPS 201
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+L P G VIG+ ++ ++ + + V D E+ I IS++
Sbjct: 25 RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQISTD---------- 72
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSR 469
++ L I T ++ ++D RLL+ S GC+ G+ G + E+R G +
Sbjct: 73 IDSTLEIITEMLKYFEERDEEYDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFS 132
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
P TD +VQ VG+ +A+ EV T R
Sbjct: 133 NVAPQS---TDRVVQTVGKQSQVIEAVREVITLTR 164
>gi|193786706|dbj|BAG52029.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 52/325 (16%)
Query: 189 GNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQV 247
+ V +++ VG L+GK G+ ++++ +T+T+I I +D +L E + V
Sbjct: 16 ADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYN----PERTITV 71
Query: 248 VGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
G I N A I ++RE+ D + + H +P +N
Sbjct: 72 KGAIENCCRAEQEIMKKVREAYENDVAAMSLQSH----------LIPGLN---------- 111
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESE 367
+ + P S GAAP S +Q E + ++ P VG +IG+
Sbjct: 112 --LAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQA--PEQEMVQVFIPAQAVGAIIGKKG 167
Query: 368 GIVELLQNEIGVDLKVADP-VDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGA 426
++ L +K+A P S +++ I+ GP + F AQ + G
Sbjct: 168 QHIKQLSRFASASIKIAPPETPDSKVRMVIIT---GPPEAQFKAQGRIYGKLKEENFFGP 224
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDE---- 481
++ + T + VP+S G + G+ G +++E++ T A + ++ R++ P DE
Sbjct: 225 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP------DENDQV 277
Query: 482 LVQIVGEIQAA-------RDALVEV 499
+V+I+G A+ RD L +V
Sbjct: 278 IVKIIGHFYASQMAQRKIRDILAQV 302
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHE-LIPGDEERIIEISDTRRRDPE 137
T + K G VIGK G IK+I++ TG + + E G + + + I+ DPE
Sbjct: 128 TQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITG----DPE 183
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+ A ++ + IL+S E+ G G G G GG R ++
Sbjct: 184 -------KVENARRMV-EEILQS--------REDHPPGHFGFPGSFGISGG-QRSIGEVI 226
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R VG ++GKGG+ I+++ E+ +I+ P D + E + G + A
Sbjct: 227 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQ-----TAQERCAVIQGTAEQIAKA 281
Query: 258 VAIISSRLRES 268
IS +++S
Sbjct: 282 TQFISELVKKS 292
>gi|148229383|ref|NP_001090529.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xenopus laevis]
Length = 610
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGD--EERIIEISDTRRRDPEGRM 140
I+ KAG VIGK G IK +++ G + + + P + ++ + I+ DP
Sbjct: 178 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAG----DP---- 229
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
Q+A ++ + I + GGF E EYG R GGN +
Sbjct: 230 ---YKVQQAKEMVLELICDQ---GGFR-EVRNEYGS---------RIGGNE-GIDFLYHD 272
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAI 260
+ VG ++G+ G++I++++ + +I+ P D S P E + Q+ G + ++A I
Sbjct: 273 VAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTP------ERVAQITGPQDRCQHAAEI 326
Query: 261 ISSRLRESQ 269
++ LR Q
Sbjct: 327 VNDLLRSVQ 335
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRM 140
++L H AG VIG+ GS IK +R+ G + V+ E P ERII+I+ + +
Sbjct: 119 KVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIVACLV 178
Query: 141 PSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGG-GGGVGGGGFRGGGNR 191
S +E R ES F EYGG G GG G RG G R
Sbjct: 179 TIISTLKEIPIKGPSRPYESI---FFDPVVANEYGGYAGDHGGRGMRGYGPR 227
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHE-LIPGDEERIIEISDTRRRDPE 137
T + K G VIGK G IK+I++ TG + + E G + + + I+ DPE
Sbjct: 130 TQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITG----DPE 185
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+ A ++ + IL+S E+ G G G G GG R ++
Sbjct: 186 -------KVENARRMV-EEILQS--------REDHPPGHFGFPGSFGISGG-QRSIGEVI 228
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R VG ++GKGG+ I+++ E+ +I+ P D + E + G + A
Sbjct: 229 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQ-----TAQERCAVIQGTAEQIAKA 283
Query: 258 VAIISSRLRES 268
IS +++S
Sbjct: 284 TQFISELVKKS 294
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 326 GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD 385
G S A AP ++ R L +IG+ V ++ + G + V++
Sbjct: 79 GDSATASTAPGGTGSGSTPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSE 138
Query: 386 PVDGSDEQIITISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI-----ITTRLLVPS 440
+ G+ E+I+ +S GP D + +A I RI D DK ++ +T + ++P+
Sbjct: 139 SIPGNPERILNVS---GPLDAV---SKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPN 192
Query: 441 SEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDA---- 495
S +G + G+ G+ + E++ ++GA + S +P T+ L+ + G A A
Sbjct: 193 SRMGSVIGKGGTKIKEIQDASGARLN-ASEGMLPGS---TERLLSVSGVADAIHIATYYI 248
Query: 496 ---LVEVTTRLRS---YLYRDFFQKETPP 518
L+E R+ S YR Q PP
Sbjct: 249 GNILIEANERMPSSNHSTYRPTSQSRRPP 277
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
R L A +IGK GS + IR+ +GA + V E IPG+ ERI+ +S
Sbjct: 104 RCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVS 151
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
T + + + + G VIGK G+ IK I+ +GA +N E ++PG ER++ +S
Sbjct: 185 TIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVS 235
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILP-------RDHSLPRCVSMSEEIVQVVGDINNVK 255
VGC++GKGG I ++R + +QI+I+ + + S E +V + G N++
Sbjct: 321 VGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGSEGERLVVITGQPANIQ 380
Query: 256 NAVAIISSRLRESQHR 271
AV ++ SRL + + +
Sbjct: 381 MAVQLLYSRLEQEKQK 396
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 157/398 (39%), Gaps = 67/398 (16%)
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ ++ ++ ++ E+ +++ GD V+
Sbjct: 188 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPG-----QEQEKPLRITGDPQKVE 242
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
+A ++ + E + + + S + F S DG SG +
Sbjct: 243 HAKQLVYELIAEKEMQLYNRGTRNFSSNNSF-----------------SQDGNSESGEDR 285
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGIVELLQN 375
R N RPS Y G P + + F P +K G +IG+ ++ +
Sbjct: 286 RGNGVTGRPSEYGSWEGNRPAGEG-------KVEFSYPVPSNKCGIIIGKGGVTIKEINQ 338
Query: 376 EIGVDLKVADPVDGSD-EQIITISSEEGPDDELFPAQEALL-------------HIQTRI 421
+ G ++ G+D ++ TI G +++ A+ + R
Sbjct: 339 QTGAHCELDRRNPGTDTDKFFTI---RGTPEQVEHAKRVFAEKLGGGMGSSSNGYPTGRP 395
Query: 422 VDLGA----DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACV 476
+ G + N + VP+++ G + G+ G ++ ++ + TGA+ ++ R
Sbjct: 396 NEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNP----G 451
Query: 477 SGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPI 536
+ T++ I G + A + +L + TP SS G G+ + +
Sbjct: 452 TETEKFFTIKGTPEQVEHAQRIFSEKLGN-------NGMTPASSLG-YGAQSAMGYNASW 503
Query: 537 DITPAREV---QTVTDPPAATHQSVQI-PATSQPSKEA 570
+ P + QT T P A Q+VQI P T QP A
Sbjct: 504 NAAPGYQAWPGQTATADPNAAGQAVQIDPNTGQPDYSA 541
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVAD--------PVDGSDEQIITISS 399
L RM+ +VG +IG+ ++ + + G + ++D V GS E I+ S
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTECILKAFS 71
Query: 400 ------EEGPDDELFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGS- 452
EE P + AL + L +T RL+VP+S+ G L G+ GS
Sbjct: 72 LICAKFEEMSSLSGSPTESALNGQKV----LPGQTPPPVTLRLIVPASQCGSLIGKAGSK 127
Query: 453 LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRL 503
+ E+R TGA++Q+ S E +P + T+ V + G A + ++ +
Sbjct: 128 IREIREITGASVQVAS-EMLP---NSTERTVTVAGTADAVTKCIYQICCVM 174
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERIIEISDT 131
T R++ + G +IGK+GS I+ IR+ TGA + V E++P ER + ++ T
Sbjct: 107 TLRLIVPASQCGSLIGKAGSKIREIREITGASVQVASEMLPNSTERTVTVAGT 159
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 74 SLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR 133
S +T YR+ D G +IG+ G I I+Q +G + + G ERI+ ++
Sbjct: 91 SSSMTEEYRV--PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERIVSLTG--- 145
Query: 134 RDPEGRMPSFSPAQEALFLIHDRILESDGG--GGFYGEEEEEYGGGGGVGGGGFRGGGNR 191
+P+ Q+A L+ D +L GG F+ G N
Sbjct: 146 -NPDA-------VQKAKMLLDDIVLRGRGGPPSQFHDSSN----------------GQNG 181
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDI 251
+++ G ++GKGG+ I+Q++ ++ IL +D S + +M + + ++VG+
Sbjct: 182 SLQEIMIPAGKAGLIIGKGGETIKQLQERAGVKM-ILIQDGS--QNTNMDKPL-RIVGEP 237
Query: 252 NNVKNAVAIISSRLRESQHRDRSHF 276
V+ A ++ L+E RD+ +F
Sbjct: 238 FKVQQACEMVMDLLKE---RDQPNF 259
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T +L K G VIGK G IK +++ TG + + + +P ++ + I+ D
Sbjct: 162 STIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITG----D 217
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q A ++ + I E D G G+ GGG +
Sbjct: 218 P------FK-VQVAREMVLEIIREKDQADFRGVRGDFSSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +IS + +Q RD
Sbjct: 310 CQHAAHVISELILTAQERD 328
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 77 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 130
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + G+
Sbjct: 131 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GSSTIQE 166
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 167 LLIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRITGDPFKVQ 222
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 223 VAREMVLEIIRE---KDQADFRG 242
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 32/266 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSRE----EVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI S E P ++GT E
Sbjct: 49 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE---- 104
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKETPPSSTGPTGSALVVEAASPIDITPARE 543
I+ A+ L ++ R R+ + D T P +V I +E
Sbjct: 105 --SIELAKRLLGQIVDRCRNGPGFHNDVDGSSTVQEVLIPASKVGLVIGKGGETIKQLQE 162
Query: 544 -----VQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESE----RREDVPTV 592
+ + D P T + T P K +A V E +++ + R D
Sbjct: 163 RTGVKMVMIQDGPLPTGADKPLRMTGDPFKVQQAREMVLEIIREKDQADFRGARGDF--- 219
Query: 593 INRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQ 652
P +LEV +P +AV +I ++ ++ + +G + ++ Q
Sbjct: 220 -----APRTGGGSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQ 274
Query: 653 ISGTPEQVERAQSVLQGFILSTQDAD 678
+ G P++ + A V+ IL+ Q+ D
Sbjct: 275 VMGPPDRCQHAAHVINELILTAQERD 300
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T +L K G VIGK G IK +++ TG + + + +P ++ + ++ D
Sbjct: 134 STVQEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRMTG----D 189
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
P F Q+A ++ + I E D G G+ GGG +
Sbjct: 190 P------FK-VQQAREMVLEIIREKDQADFRGARGDFAPRTGGG---------------S 227
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 228 LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 281
Query: 254 VKNAVAIISSRLRESQHRD 272
++A +I+ + +Q RD
Sbjct: 282 CQHAAHVINELILTAQERD 300
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 49 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT---- 102
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + G+
Sbjct: 103 PE----SIELAKRLLGQIVDRCRN---GPGFHNDVD-----------------GSSTVQE 138
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ ++ +D LP + +++ +++ GD V+
Sbjct: 139 VLIPASKVGLVIGKGGETIKQLQERTGVKM-VMIQDGPLP---TGADKPLRMTGDPFKVQ 194
Query: 256 NAVAIISSRLRESQHRDRSHFHG 278
A ++ +RE +D++ F G
Sbjct: 195 QAREMVLEIIRE---KDQADFRG 214
>gi|426363332|ref|XP_004048795.1| PREDICTED: far upstream element-binding protein 3 [Gorilla gorilla
gorilla]
Length = 572
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 36/199 (18%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE--LIPGDEERIIEISDTRRRD 135
+T IL K G VIG+ G IK +++ TG + + + +P ++ + I+ +
Sbjct: 162 STIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFK- 220
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGG--GFYGEEEEEYGGGGGVGGGGFRGGGNRVA 193
Q+A ++ + I E D G + GGG +
Sbjct: 221 ----------VQQAREMVLEIIREKDQADFRGVRSDFNSRMGGG---------------S 255
Query: 194 TRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINN 253
+ V R VG ++G+ G++I++++ + +I+ P D P E QV+G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP------ERAAQVMGPPDR 309
Query: 254 VKNAVAIISSRLRESQHRD 272
++A IIS + +Q RD
Sbjct: 310 CQHAAHIISELILTAQERD 328
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 417 IQTRIVD------LGA--DKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL 467
+Q R +D LGA + +IT VP +G + GR G +S ++ +G IQI
Sbjct: 55 VQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIA 114
Query: 468 SRE----EVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSY--LYRDFFQKET----- 516
S E P ++GT E I+ A+ L ++ R R+ + D T
Sbjct: 115 SESSGIPERPCVLTGTPE------SIEQAKRLLGQIVDRCRNGPGFHNDVDSNSTIQEIL 168
Query: 517 -PPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAAT--HQSVQIPATSQPSKE 569
P S G LV+ E + ++ + D P T + ++I + ++
Sbjct: 169 IPASKVG-----LVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQ 223
Query: 570 AAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRF 629
A V E +++ + V + N + ++EV +P +AV +I ++ ++ +
Sbjct: 224 AREMVLEIIREKDQADFRGVRSDFNS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKI 279
Query: 630 SEMSGASVSLVEGQPEGTQKIIQISGTPEQVERAQSVLQGFILSTQDAD 678
+G + ++ Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 280 QNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD 328
>gi|390335393|ref|XP_003724136.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 696
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 82/151 (54%), Gaps = 21/151 (13%)
Query: 352 MLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDG-SDEQIITISSEEGPDDELFPA 410
+L P VG +IG + LQ+E G ++++A P +G S ++ +T++
Sbjct: 128 LLVPDKVVGLIIGRQGQQISSLQSESGCNIQIA-PENGISGDRQVTLTGTP--------- 177
Query: 411 QEALLHIQTRIVDL-----GADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANI 464
EA++H ++ I+D+ + + +T +L+P++++G + G+ G ++ +++ G +
Sbjct: 178 -EAVMHAKSLILDIVNKASQNEAEGNMTVDMLIPATKVGLVIGKGGETIKQLQEQAG--V 234
Query: 465 QILSREEVPACVSGTDELVQIVGEIQAARDA 495
+++ +E P +G D+ ++I G+ Q +A
Sbjct: 235 RMVMIQEGP-VATGMDKPLRISGDSQKIEEA 264
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 36/256 (14%)
Query: 432 ITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQ 490
I LLVP +G + GR G +S ++ +G NIQI +SG D V + G +
Sbjct: 124 INDELLVPDKVVGLIIGRQGQQISSLQSESGCNIQIAPEN----GISG-DRQVTLTGTPE 178
Query: 491 AARDALVEVTTRLRSYLYRDFFQKETPPSSTG---------PTGSALVV----EAASPID 537
A A L D K + + G T LV+ E +
Sbjct: 179 AVMHA---------KSLILDIVNKASQNEAEGNMTVDMLIPATKVGLVIGKGGETIKQLQ 229
Query: 538 ITPAREVQTVTDPPAAT--HQSVQIPATSQPSKEAAGSVSETVKQNESERREDVPTVINR 595
+ + + P AT + ++I SQ +EA VSE ++ ++ R +R
Sbjct: 230 EQAGVRMVMIQEGPVATGMDKPLRISGDSQKIEEAKRLVSEVMENAKNNDRSSGDNFYSR 289
Query: 596 VPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISG 655
+V++P +AV +I + ++ R E + A V G + +++ I+G
Sbjct: 290 ------GGPHKDVIVPKHAVGMVIGRGGDMIKRIQEQTKARVQFKPGDRDAPERVALITG 343
Query: 656 TPEQVERAQSVLQGFI 671
+ E V A+S++ +
Sbjct: 344 SAESVSMAESMVNDLV 359
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 145/388 (37%), Gaps = 85/388 (21%)
Query: 59 INNSNNRANSNPKDPSLMVTT---------TYRILCHDMKAGGVIGKSGSIIKSIRQHTG 109
++ S NR N N + + T T R + +AG +IGK+G + +R TG
Sbjct: 19 LSESFNRVNLNEQGEEITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETG 78
Query: 110 AWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGE 169
V +++ G +R++ ++ +A ++ +LE
Sbjct: 79 VKAGVSKVVQGVHDRVLTVTG-----------PLQGTAKAYGMVAKSLLE---------- 117
Query: 170 EEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP 229
G VG GG R+++S +G ++G+ G I+ ++ + +R++
Sbjct: 118 ------GAPQVGMGGIIQNNGTHPVRLLISHNQMGTIIGRQGLKIK--YIQDASGVRMVA 169
Query: 230 RDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPD 289
+ LP+ +E IV+V G ++ AV I L + R
Sbjct: 170 QKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTV------------- 213
Query: 290 DDYVPHMNNTARRPSMDGARFSGSNYRSN-NYGPRPSGYSIEAGAAPMSDSVQPFY---- 344
+ N A R ++ G + + S N NYG R Y+ A SD Y
Sbjct: 214 ------LYNPAVRANVGGGQMNSSFLGPNPNYGGRS--YNRTGNGADFSDQPSSGYNRRH 265
Query: 345 ---------------GEDLVFRMLC-PIDKVGRVIGESEGIVELLQNEIGVDLKVADPV- 387
GE++ + + P D VG +IG + ++ G + +A
Sbjct: 266 NSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKASH 325
Query: 388 DGSDEQIITI-SSEEGPDDELFPAQEAL 414
D + E++ TI S + + L+ E L
Sbjct: 326 DETGERMFTIMGSAQANEKALYLLYENL 353
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQI--LSREEVPACVSGTDELV 483
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I S +E + +
Sbjct: 280 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKASHDET------GERMF 333
Query: 484 QIVGEIQAARDALVEVTTRLRSYLYR 509
I+G QA AL + L + R
Sbjct: 334 TIMGSAQANEKALYLLYENLEAEKMR 359
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 351 RMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPA 410
R+L P G VIG+ ++ ++ + + V D E+ I IS++
Sbjct: 25 RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPERTIQISTDI--------- 73
Query: 411 QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSR 469
++ L I T ++ ++D RLL+ S GC+ G+ G + E+R G +
Sbjct: 74 -DSTLEIITEMLKYFEERDEEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFS 132
Query: 470 EEVPACVSGTDELVQIVGEIQAARDALVEVTTRLR 504
P TD +VQ VG+ DA+ EV T R
Sbjct: 133 NVAPQS---TDRVVQTVGKQSQVIDAVREVITLTR 164
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 76 MVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 135
++T +++ D G +IG+ G I I+ +G I + G ER ++ T
Sbjct: 96 VITEEFKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGT---- 149
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
PE S A+ L I DR G GF+ + + GN
Sbjct: 150 PE----SIEQAKRLLGQIVDRCRN---GPGFHNDVD-----------------GNSTIQE 185
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
+++ VG ++GKGG+ I+Q++ T ++ I+ +D LP + +++ +++ G+ V+
Sbjct: 186 ILIPASKVGLVIGKGGETIKQLQERTGVKM-IMIQDGPLP---TGADKPLRITGEPFKVQ 241
Query: 256 NAVAIISSRLRESQHRD----RSHFHGRL 280
A ++ +RE D RS F R+
Sbjct: 242 QAREMVLEIIREKDQADFRGVRSDFSSRM 270
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 431 IITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQIL----SREEVPACVSGTDELVQI 485
+IT VP +G + GR G +S ++ +G IQI E P ++GT E
Sbjct: 96 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGTPE---- 151
Query: 486 VGEIQAARDALVEVTTRLRSY--LYRDFFQKET------PPSSTGPTGSALVV----EAA 533
I+ A+ L ++ R R+ + D T P S G LV+ E
Sbjct: 152 --SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVG-----LVIGKGGETI 204
Query: 534 SPIDITPAREVQTVTDPPAATHQSVQIPATSQPSK--EAAGSVSETVKQNESERREDVPT 591
+ ++ + D P T + T +P K +A V E +++ + V +
Sbjct: 205 KQLQERTGVKMIMIQDGPLPTGADKPLRITGEPFKVQQAREMVLEIIREKDQADFRGVRS 264
Query: 592 VINRVPLPLVTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKII 651
+ + ++EV +P +AV +I ++ ++ + +G + +++
Sbjct: 265 DFSS----RMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVA 320
Query: 652 QISGTPEQVERAQSVLQGFILSTQDAD 678
Q+ G P++ + A ++ IL+ Q+ D
Sbjct: 321 QVMGLPDRCQHAAHIINELILTAQERD 347
>gi|313223506|emb|CBY41924.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
R+L H KAG VIG G IK +R TG INV++ P +R+I+++
Sbjct: 64 RMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHSSDRLIKVA 112
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 36/223 (16%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE------LIPGDEERIIEISDTRRRD 135
R+L G +IGKSG+ I SI Q + A + V++ G +++I I T
Sbjct: 198 RMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVINIHGT---- 253
Query: 136 PEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
EA RILE +E + + GG R + R
Sbjct: 254 -----------NEACSQACKRILE-------VMLQESQQPATNTMNGGTSRRRDEPITLR 295
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++ VG ++G+ G +I+++ ET +I + + PR E ++ + G++ +
Sbjct: 296 LLAHNNLVGRVIGRSGIVIKKIMEETNAKINV--SQMTDPR-----ERVIVIRGNLEEMS 348
Query: 256 NAVAIISSRLRESQHRD-RSHFHGRLHSPDRFFPDDDYVPHMN 297
A I+S++R+ +D + G PD P P ++
Sbjct: 349 KAQQQITSKMRQCYEQDLQQAMMGGYGGPDLGPPPQQIPPALS 391
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R+L H+ G VIG+SG +IK I + T A INV ++ ER+I I G
Sbjct: 293 TLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKINVSQMT-DPRERVIVI--------RGN 343
Query: 140 MPSFSPAQEALFLIHDRILESD 161
+ S AQ+ + + E D
Sbjct: 344 LEEMSKAQQQITSKMRQCYEQD 365
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 346 EDLVFRMLCPIDKVGRVIGES----EGIVELLQNEIGVDLKVADPV--DGSDEQIITISS 399
++L RML P + VG +IG+S I + Q ++ V+ K A + DG +++I I
Sbjct: 193 KELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVINI-- 250
Query: 400 EEGPDDELFPAQEALLHIQ--------TRIVDLGAD--KDNIITTRLLVPSSEIGCLEGR 449
G ++ A + +L + T ++ G +D IT RLL ++ +G + GR
Sbjct: 251 -HGTNEACSQACKRILEVMLQESQQPATNTMNGGTSRRRDEPITLRLLAHNNLVGRVIGR 309
Query: 450 DG-SLSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLY 508
G + ++ T A I + S+ P + ++ I G ++ A ++T+++R
Sbjct: 310 SGIVIKKIMEETNAKINV-SQMTDP-----RERVIVIRGNLEEMSKAQQQITSKMRQCYE 363
Query: 509 RDFFQ 513
+D Q
Sbjct: 364 QDLQQ 368
>gi|432881655|ref|XP_004073886.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 2 [Oryzias latipes]
Length = 447
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 192 VATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILP-RDHSLPRCVSMSEEIVQVVGD 250
+ +++ VG L+GK G+ ++++ +T T+I I P +D +L E + V G
Sbjct: 138 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYN----PERTITVKGS 193
Query: 251 INNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARF 310
I A + ++RE+ D + + L S + +P +N A G
Sbjct: 194 IEACSRAEEEVMKKVREAYESDMAAMN--LQS--------NLIPGLNLNALGLFPSGTPG 243
Query: 311 SGSNYRSNNYGPRPS-GYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGESEGI 369
G + +N+ P + G G P S++V F P VG +IG+
Sbjct: 244 MGPSM--SNFPPSGAHGGCSSFGGQPESETVHLFI----------PALAVGAIIGKQGQH 291
Query: 370 VELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDELFPAQEALLHIQTRIVDLGAD 427
++ L + G +K+A P +G D ++++ I GP + F AQ + G
Sbjct: 292 IKQLSHFAGASIKIA-PAEGMDAKQRMVIIV---GPPEAQFKAQCRIFGKLKEENFFGPK 347
Query: 428 KDNIITTRLLVPSSEIGCLEGRDG-SLSEMRRSTGANIQILSREEVP 473
++ + + VPS G + G+ G +++E++ T A + ++ R++ P
Sbjct: 348 EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTP 393
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 41/257 (15%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV---HELIPGDEERIIEIS---DTRRRD 135
+IL H+ G +IGK G +K I Q TG I + +L + ER I + + R
Sbjct: 141 KILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYNPERTITVKGSIEACSRA 200
Query: 136 PEGRMPSFSPAQE----ALFLIHDRI--LESDGGGGF------YGEEEEEYGGGGGVGGG 183
E M A E A+ L + I L + G F G + G GG
Sbjct: 201 EEEVMKKVREAYESDMAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSNFPPSGAHGGC 260
Query: 184 GFRGGGNRVAT-RMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSE 242
GG T + + + VG ++GK G+ I+Q+ I+I P + + +
Sbjct: 261 SSFGGQPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEG-----MDAKQ 315
Query: 243 EIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARR 302
+V +VG E+Q + + G+L + F P ++ + +
Sbjct: 316 RMVIIVGP---------------PEAQFKAQCRIFGKLKEENFFGPKEEV--KLEAHIKV 358
Query: 303 PSMDGARFSGSNYRSNN 319
PS R G ++ N
Sbjct: 359 PSFAAGRVIGKGGKTVN 375
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 133/356 (37%), Gaps = 72/356 (20%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 49 TLRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+A ++ +LE G +G GG R+++S
Sbjct: 100 --PLQGTAKAYGMVAKSLLE----------------GAPQMGMGGIIQNNGTHPVRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 142 HNQMGTIIGRNGLKIKC--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 196
Query: 260 IISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNYRSNN 319
I L + R Y P + SM+ A F G N N
Sbjct: 197 EIGKCLIDDWQRGTGTVL--------------YNPAVRANVGGASMNSA-FVGPN--PNT 239
Query: 320 YGPRPSGYSIEAGAAPMSD----------SVQPFYGEDLVFR---------MLCPIDKVG 360
Y RP Y+ A SD S P G LV + P D VG
Sbjct: 240 YSGRP--YNRTGNGADFSDHPGTYNRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVG 297
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPV-DGSDEQIITI-SSEEGPDDELFPAQEAL 414
+IG + ++ G + +A D + E++ TI S + + L+ E L
Sbjct: 298 CIIGRGGSKISEIRRSSGARISIAKAAHDETGERMFTIMGSAQANEKALYLLYENL 353
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR GS +SE+RRS+GA I I A + + I
Sbjct: 280 DGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAK----AAHDETGERMFTI 335
Query: 486 VGEIQAARDALVEVTTRLRSYLYR 509
+G QA AL + L + R
Sbjct: 336 MGSAQANEKALYLLYENLEAEKMR 359
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 45/161 (27%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEISDTRRRDPEGRMP 141
I+ K G +IGK G IK +++ +GA + V + P E E+ + IS DP
Sbjct: 224 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISG----DP----- 274
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR------ 195
S + A L++D I E +E + Y RGGG R R
Sbjct: 275 --SKVEYAKQLVYDLIAE---------KEMQNYN---------RRGGGGRQDDRQQYNDY 314
Query: 196 ---------MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
++V R VG ++GKGG +I++++ ET +++
Sbjct: 315 GGGGGNEAEVLVPRQAVGVVIGKGGDMIKKIQAETGARVQF 355
>gi|189238744|ref|XP_972178.2| PREDICTED: similar to P-element somatic inhibitor [Tribolium
castaneum]
Length = 727
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 45/161 (27%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEISDTRRRDPEGRMP 141
I+ K G +IGK G IK +++ +GA + V + P E E+ + IS DP
Sbjct: 195 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISG----DP----- 245
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR------ 195
S + A L++D I E +E + Y RGGG R R
Sbjct: 246 --SKVEYAKQLVYDLIAE---------KEMQNYN---------RRGGGGRQDDRQQYNDY 285
Query: 196 ---------MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
++V R VG ++GKGG +I++++ ET +++
Sbjct: 286 GGGGGNEAEVLVPRQAVGVVIGKGGDMIKKIQAETGARVQF 326
>gi|358381022|gb|EHK18698.1| hypothetical protein TRIVIDRAFT_125660, partial [Trichoderma virens
Gv29-8]
Length = 527
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 64 NRANSNPKDPSLMVTTTYR-------ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE 116
NRA P+DP+ R I+ D G +IG+ G I+ +++ +G IN+
Sbjct: 252 NRAQEKPRDPARGGAAALRDGEDHMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV- 310
Query: 117 LIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILE-----SDGGGGFYGEEE 171
G+ + + + R + ++EA D I+E S G G G ++
Sbjct: 311 ---GESKSVNGL----------RPVNLIGSREAAARAKDFIMEIVDSDSRGDGPASGTKK 357
Query: 172 EEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRI 227
F GG +++ + V VG ++GKGG+ I +M+ T +I +
Sbjct: 358 PTSAPRNDGPPRDFSGGSDKINDAIYVPSDAVGMIIGKGGETIREMQNTTGCKINV 413
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R L +AG +IGK G+ I +IRQ V +++PG ++R++ +S DPE
Sbjct: 20 TLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSG----DPEAI 75
Query: 140 MPSFSPAQEALFL--IHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+++ L + D + F + R++
Sbjct: 76 AAAYAEVARLLLETPLSDSSMPPPPVNQF-------------------------TSIRLL 110
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
+S +G ++G+ G I+Q ++ + R++ LP+ +E +V+V G + +K A
Sbjct: 111 ISHNLMGTVIGRAGVKIKQ--IQDMSGARMVASKEMLPQS---TERVVEVQGAQDAIKTA 165
Query: 258 VAIISSRLRESQHRD 272
+ I+ L E R+
Sbjct: 166 IFEIAKCLLEDWERN 180
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 139/341 (40%), Gaps = 41/341 (12%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK G + +R TG V +++ G +R++ I+ G
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTIT--------GE 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ S A + I R L E G GG V G + A ++++S
Sbjct: 100 CDAISRA----YAIVARALL---------EGAPAMGMGGIVQSNGTH--LSSTAIKLLIS 144
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G + ++ AV
Sbjct: 145 HNQMGTIIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERIVEVQGTPDGIQRAVW 199
Query: 260 IISSRLRESQHRDRSHFHGRLHSP--DRFFPDDDYVPHMNNTARRPSMDGARF--SGSNY 315
I L + R L++P + NN R R +G+
Sbjct: 200 EICKCLVDDWQRGTGTV---LYNPVVRTQAGSGGLGSNYNNGGGRSDYGSPRVMRTGNGA 256
Query: 316 RSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRML-CPIDKVGRVIGESEGIVELLQ 374
+N G RP ++ AA GE++ + + P D VG +IG + + ++
Sbjct: 257 DFSNGGVRPFSRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIR 316
Query: 375 NEIGVDLKVADPVDGSDEQIITI-SSEEGPDDELFPAQEAL 414
G + +A + E++ TI + + + LF E L
Sbjct: 317 KTSGARISIAK----TGERMFTIMGTAKANESALFLLYENL 353
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 129
R L A +IGK GS + IR+ +GA + V E IPG+ ERI+ +S
Sbjct: 115 RCLIVTQDASIIIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVS 162
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS----------EEIVQVVGDIN 252
VGC++GKGG I ++R + +QI+I+ + V M+ E +V + G
Sbjct: 346 VGCIIGKGGAKINEIRHMSASQIKIMEPGAT---AVGMNGAPAPAGGEGERLVVITGQPA 402
Query: 253 NVKNAVAIISSRL-RESQHRDRSHFHGRLH 281
N++ AV ++ RL +E Q + R+ G H
Sbjct: 403 NIQMAVQLLYHRLEQEKQKQLRAQQTGASH 432
>gi|326470883|gb|EGD94892.1| KH domain RNA-binding protein [Trichophyton tonsurans CBS 112818]
gi|326478447|gb|EGE02457.1| KH domain RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 367
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+A ++ +LE G +G GG + R+++S
Sbjct: 100 --PLQGTSKAYSIVAKSLLE----------------GAPQMGMGGVVQNNGTHSVRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 142 HNQMGTIIGRQGLKIKY--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 196
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 197 EIGKCLIDDWQR 208
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR G+ +SE+RRS+GA I I + P +G + + I
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDTG-ERMFTI 336
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G QA AL + L + R Q+
Sbjct: 337 MGSAQANEKALYLLYENLEAEKMRRSQQQ 365
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHE-LIPGDEERIIEIS 129
R+L H KAG VIG G IK +R TG INV++ P +R+I+++
Sbjct: 218 RMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHSSDRLIKVA 266
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 136/350 (38%), Gaps = 59/350 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+ A ++ +LE G VG GG R+++S
Sbjct: 100 --ALQGCARAYSIVAKGLLE----------------GAPQVGMGGVVQNNGTHPIRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 142 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 196
Query: 260 IISSRLRESQHRDRSHF------------HGRL-HSPDRFFPDDDYVPHMNNTARRPSMD 306
I L + R G+L H+ DR N T +
Sbjct: 197 EIGKCLIDDWQRGTGTVLYNPAVRVSIGGSGQLNHNGDRTGGSYGGGRSYNRTG-----N 251
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
GA FS S Y R SG + ++D + +++ P D VG +IG
Sbjct: 252 GADFS---EPSGGYNRRGSGDNGNRNLPLVTDDGEEVQTQNISI----PADMVGCIIGRG 304
Query: 367 EGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEAL 414
+ ++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 305 GSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENL 354
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +P+ +GC+ GR GS +SE+RRS+GA I I + P +G + + I
Sbjct: 281 DGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDETG-ERMFTI 336
Query: 486 VGEIQAARDALVEVTTRLRSYLYR 509
+G QA AL + L + R
Sbjct: 337 MGSAQANEKALYLLYENLEAEKMR 360
>gi|302654659|ref|XP_003019130.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
gi|291182834|gb|EFE38485.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++ +G
Sbjct: 61 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL----QGT 116
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
++S ++L E + G GG V G + R+++S
Sbjct: 117 SKAYSIVAKSLL-----------------EGAPQMGMGGVVQNNGTH------SVRLLIS 153
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 154 HNQMGTIIGRQGLKIK--YIQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 208
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 209 EIGKCLIDDWQR 220
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR G+ +SE+RRS+GA I I + P +G + + I
Sbjct: 293 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDTG-ERMFTI 348
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G QA AL + L + R Q+
Sbjct: 349 MGSAQANEKALYLLYENLEAEKMRRSQQQ 377
>gi|328708265|ref|XP_001949890.2| PREDICTED: far upstream element-binding protein 1-like
[Acyrthosiphon pisum]
Length = 767
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 34/179 (18%)
Query: 73 PSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE--ERIIEISD 130
PS T +I+ K G +IGK G IK +++ +GA + V + P + E+ + IS
Sbjct: 198 PSQPAFTQAQIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDGPNSQENEKPLRISG 257
Query: 131 TRRRDPEGRMPSFSPAQEALFLIHDRI-LESDG-------GGGFYGEEEEEYGGGGGVGG 182
+ + A L++D + + DG G + G +Y G GG
Sbjct: 258 ETAK-----------VEHAKKLVYDMLGGDKDGSSNFDQNGSNWNGSNSGDYSMHSGYGG 306
Query: 183 GGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLP---RCV 238
+ V + VG ++GKGG +I++++ +T +++ + + P RC+
Sbjct: 307 ----------KVEVGVPKQVVGLVIGKGGDMIKKIQADTGAKVQFINLNEDTPDDRRCL 355
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 91 GGVIGKSGSIIKSIRQHTGA---WINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQ 147
G VIGK G +IK I+ TGA +IN++E P D +I + + + + R+ S
Sbjct: 318 GLVIGKGGDMIKKIQADTGAKVQFINLNEDTPDDRRCLITGNPDQVAEAKQRIESL--VD 375
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
AL +R GGGG + +G G T V G ++
Sbjct: 376 SALNRSGNRQSGGGGGGGGNFNRNQSWGNSGQTQ--------PLNETTFTVPSAKCGVII 427
Query: 208 GKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIISSRL 265
GKGG+ I+Q+ M+T I R ++ + SE+ + G ++NA +I+ +L
Sbjct: 428 GKGGETIKQINMQTGAHCEIDRRHNN-----TGSEKTFVIRGTTEQIENAKRMINEKL 480
>gi|440638759|gb|ELR08678.1| hypothetical protein GMDG_03364 [Geomyces destructans 20631-21]
Length = 572
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 58/215 (26%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV------------------HELIPGD 121
+ +I+ D G +IG+ G I+ +++ +G +N+ E
Sbjct: 310 SMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGSREAAAQA 369
Query: 122 EERIIEI--SDTRRRDPEGRMP--SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGG 177
++ I+EI SD++ +GR P PA++A +
Sbjct: 370 KDLIMEIVESDSKSAAEKGRAPPPQREPARDANY-------------------------- 403
Query: 178 GGVGGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRC 237
GG GG ++V + V VG ++GKGG+ I+ M+ T +I + P S P
Sbjct: 404 -----GGASGGADKVNDSIYVPSEAVGMIIGKGGETIKDMQNTTGCKINVTP--SSGPGE 456
Query: 238 VSMSEEIVQVVGDINNVKNAVAIISSRLRESQHRD 272
V E + +VG ++++ A I ++ Q ++
Sbjct: 457 V---EREIGLVGSRDSIERAKLAIEDKVEAVQLKN 488
>gi|260797497|ref|XP_002593739.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
gi|229278967|gb|EEN49750.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
Length = 730
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R VG ++GKGG++I++++ E+ +++ P D P + Q++G + + A
Sbjct: 315 VPRFAVGIVIGKGGEMIKKIQNESGVRVQFKPDDGQNPN------RVCQLIGAPDRCQAA 368
Query: 258 VAIISSRLRESQHRDRS 274
I + + ++Q RD++
Sbjct: 369 AHTIQNLVEDAQQRDQA 385
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMP 141
RIL G +IG+ G+ I+ I Q T A ++VH D +E + T +P+
Sbjct: 117 RILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHR---KDNVGSLEKAITIYGNPDNCTN 173
Query: 142 SFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRM 201
+ E +++++ GE ++ +++
Sbjct: 174 ACKKILE--------VMQAEASNTNKGE----------------------ISLKILAHNN 203
Query: 202 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMS-EEIVQVVGDINNVKNAVAI 260
+G ++GKGG I+++ +T ++I + S+ S + E I+ V G I+N+ A +
Sbjct: 204 LIGRIIGKGGNTIKRIMQDTDSKITV----SSINDINSFNLERIITVKGTIDNMSRAESE 259
Query: 261 ISSRLRESQHRD 272
IS++LR+S D
Sbjct: 260 ISAKLRQSYEND 271
>gi|72006494|ref|XP_785759.1| PREDICTED: tudor and KH domain-containing protein-like
[Strongylocentrotus purpuratus]
Length = 489
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 350 FRMLCPIDKVGRVIGESEGI-VELLQNEIGVDLKVADPVDGSD--EQIITISSEEGPDDE 406
M P +KVG +IG EGI ++ +Q+E G +++ +D D ++++ I +G D
Sbjct: 51 LEMSIPHNKVGPLIGR-EGINIKRIQSESGANVRFSDETKREDKSDRLLRI---QGNRDS 106
Query: 407 LFPAQEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQI 466
+F A+ +L D +++ IIT L++P +G + GR G+ M ++T
Sbjct: 107 IFLAERLIL-------DFLSEQPEIITKTLMLPQQAVGRIIGRQGTNIRMIQNTSMARVK 159
Query: 467 LSREEVPACVSGTDELVQIVGEIQ---AARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
+ R+ V T L I G IQ A + +++ + Y R + P
Sbjct: 160 IDRDIVDG--DDTKRLCTIRGSIQQVDTAENMIIDEINEMEDYNQR--LAEAAANRKERP 215
Query: 524 TG-SALVVEAASPIDITPARE 543
TG SA V + + PA E
Sbjct: 216 TGKSARSVSPQPKLTLNPAPE 236
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T +I + G +IGK G+ I IRQ +G+ I ++E + ER++ I+ T+ +
Sbjct: 392 TQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECN---- 447
Query: 140 MPSFSPAQEALFLIHDRILES 160
Q AL++++ R+ ES
Sbjct: 448 -------QMALYMLYSRLGES 461
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 56 NTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH 115
N + N R +PKD + ++L H +AGG+IG G IK +R+ TGA I V
Sbjct: 124 NEAALNGPGRFGRDPKD-----DMSIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKVQ 178
Query: 116 E-LIPGDEERIIEIS 129
+ P +R+ ++
Sbjct: 179 QDCCPNSTDRVCMVA 193
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
++L H AG VIG+ GS IK +R+ G + V+ E P ERII+I+
Sbjct: 119 KVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQIN 167
>gi|149236583|ref|XP_001524169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452545|gb|EDK46801.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 733
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 341 QPFYGED----LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIIT 396
+PF+ ED + R++CP+ + ++G+ + L+ + V ++V++ + E+I+T
Sbjct: 323 KPFHVEDDASFISVRIICPVKEASTIVGKQGSKINHLREKANVRIQVSENIRDVPERIVT 382
Query: 397 ISSEEGPDDELFPAQEALLHIQTRIVDLGADKDNI----ITTRLLVPSSEIGCLEGRDGS 452
+ G + + A+ L ++T + + + NI T +LL+P + IG L G+ GS
Sbjct: 383 V---RGTPENI--ARAYGLIVRTILSEPEDEPANINSQQYTLKLLIPHALIGFLIGKQGS 437
Query: 453 -LSEMRRSTGANIQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDF 511
E+ ++ A L E P S TD ++ + G A A+ ++ L ++D
Sbjct: 438 KFREIEENSAAK---LKAAEQPLPYS-TDRVLSVSGVGDAIHIAVYYLSLLLND--HQDV 491
Query: 512 FQK 514
+K
Sbjct: 492 LKK 494
>gi|313246366|emb|CBY35281.1| unnamed protein product [Oikopleura dioica]
Length = 641
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 139/347 (40%), Gaps = 44/347 (12%)
Query: 355 PIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEAL 414
P VG +IG++ + +Q E G +++ G E+ T++ G ++ A++ L
Sbjct: 52 PDQLVGLIIGKNGEQINRIQQETGCRVQIVPNSTGGSERPCTLT---GTFHQVHHAKQKL 108
Query: 415 LHIQTRI------VDLGADKD---------NIITTRLLVPSSEIGCLEGRDG-SLSEMRR 458
I TR + G +K N + + +P + G + G+ G +L ++ +
Sbjct: 109 NEIITRGGPRENGMSYGENKHQGQFNIIFLNQMQHEMQIPPDKCGLIIGKGGNTLKQLMQ 168
Query: 459 STGANIQI------LSREEVPACVSGTDELVQ-----IVGEIQAARDALVEVTTRLRSYL 507
+ + ++R+E P + GT + V+ IVG + A +D + + +
Sbjct: 169 EFNVKLHLVQESAEITRDEKPLKIIGTPQAVESAKNAIVG-LMAQKDGAKPAASIINTKT 227
Query: 508 YRDFFQKETPPSSTGPTGSALVV----EAASPIDITPAREVQTVTDPPAATHQSVQIPAT 563
+ P ++ G +V+ E S I +Q TD P +S I T
Sbjct: 228 VGHSIEVSVPKAAVG-----VVIGRGGENISKIQNETNTRIQFKTDDPTQDVRSCSISGT 282
Query: 564 SQPSKEAAGSVSETVKQNESERREDVPTVINRVPLPLVTRSTLEVVLPDYAVPKLITKSK 623
+ + A +SE +Q E+ P N + + +E +P +I K
Sbjct: 283 PEACQVANDRISEIARQKLQEQHP--PLHGNNDSSFMQGQHCVEYPVPASRAGVVIGKGG 340
Query: 624 TLLTRFSEMSGASVSLVEGQPEG--TQKIIQISGTPEQVERAQSVLQ 668
+ E SGA V + + + K I GT +Q++ AQ ++Q
Sbjct: 341 ENIRLIKENSGAFVQIEKNASDKGDNWKTFIIRGTEQQIQEAQKLIQ 387
>gi|158297666|ref|XP_317858.4| AGAP011446-PA [Anopheles gambiae str. PEST]
gi|157014686|gb|EAA13030.4| AGAP011446-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 31/141 (21%)
Query: 89 KAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEISDTRRRDPEGRMPSFSPAQ 147
K G +IGK G IK +++ TGA + + + PG E E+ + IS DP + +
Sbjct: 186 KVGLIIGKGGETIKQLQEKTGAKMVIIQDGPGQEMEKPLRISG----DP-------AKVE 234
Query: 148 EALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMHVGCLL 207
+A L+++ I E D Y + + GG + V + VG ++
Sbjct: 235 QAKQLVYELIQEKDA----YSQRQNMNGG---------------EQAEVFVPKAAVGVVI 275
Query: 208 GKGGKIIEQMRMETKTQIRIL 228
GKGG++I++++ E+ +++ +
Sbjct: 276 GKGGEMIKKIQGESGCKLQFI 296
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++ +G
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL----QGT 104
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
++S ++L E + G GG V G + R+++S
Sbjct: 105 SKAYSIVAKSLL-----------------EGAPQMGMGGVVQNNGTH------SVRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ A+
Sbjct: 142 HNQMGTIIGRQGLKIK--YIQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAIW 196
Query: 260 IISSRLRESQHR 271
I L + R
Sbjct: 197 EIGKCLIDDWQR 208
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +PS +GC+ GR G+ +SE+RRS+GA I I + P +G + + I
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDTG-ERMFTI 336
Query: 486 VGEIQAARDALVEVTTRLRSYLYRDFFQK 514
+G QA AL + L + R Q+
Sbjct: 337 MGSAQANEKALYLLYENLEAEKMRRSQQQ 365
>gi|307187117|gb|EFN72361.1| Far upstream element-binding protein 1 [Camponotus floridanus]
Length = 690
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPS 142
I D G +IG+ G I ++ TG I + G ER+ ++ +R +
Sbjct: 103 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSRE--------A 154
Query: 143 FSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSRMH 202
+ A+E + I ++ S+G G GG GG+ GF +++
Sbjct: 155 VNRAKELVLSIVNQRSRSEGIGDINMSSASASGGNGGMIHPGF--------VEIMIPGPK 206
Query: 203 VGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVAIIS 262
VG ++GKGG+ I+Q++ ++ ++ ++ S + E+ +++ GD V+ A ++
Sbjct: 207 VGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ-----EKPLRITGDPQKVEYAKQLVY 261
Query: 263 SRLRESQHRDRSHFH 277
+ E ++ FH
Sbjct: 262 ELIAE---KEMQMFH 273
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
++L H AG VIG+ GS IK +R+ G + V+ E P ERII+I+
Sbjct: 146 KVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQIN 194
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 28/191 (14%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGA-WINVHE-LIPGDEERIIEISDTRRRDPE 137
T + K G VIGK G IK+I++ TG + + E G + + + I+ DPE
Sbjct: 166 TQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITG----DPE 221
Query: 138 GRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMV 197
+ A ++ + IL+S E+ G G G GG R ++
Sbjct: 222 -------KVENARRMV-EEILQS---------REDHPPGHFGFPGSFGMSGGQRSIGEVI 264
Query: 198 VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNA 257
V R VG ++GKGG+ I+++ E+ +I+ P + + E + G + A
Sbjct: 265 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPDNDQ-----TAQERCAVIQGTAEQIAKA 319
Query: 258 VAIISSRLRES 268
IS +++S
Sbjct: 320 TQFISELVKKS 330
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 82 RILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVH-ELIPGDEERIIEIS 129
RI+ H AG +IG++G IK +R+ TGA V+ E P +R+++++
Sbjct: 117 RIMVHQSHAGAIIGRAGFKIKELREKTGAHFKVYTETCPKSTDRVVQLT 165
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 53 MNNNTSINNSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWI 112
+ + +++NN S S+ + T I D G ++GK G I Q++GA I
Sbjct: 280 LMSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARI 339
Query: 113 NVH---ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRI 157
V E +PG R + I+ G +P+ AQ A FL+ RI
Sbjct: 340 QVSQKGEFVPGTSNRKVVIT--------GDVPA---AQLAHFLVTQRI 376
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 134/350 (38%), Gaps = 59/350 (16%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK+G + +R TG V +++ G +R++ ++
Sbjct: 49 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG--------- 99
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
A ++ +LE G VG GG R+++S
Sbjct: 100 --GLQGCARAYSIVAKGLLE----------------GAPQVGMGGVVQNNGTHPIRLLIS 141
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E IV+V G ++ AV
Sbjct: 142 HNQMGTIIGRQGLKIKH--IQDASGVRMVAQKEMLPQS---TERIVEVQGTPEGIEKAVW 196
Query: 260 IISSRLRESQHRD----------RSHFHGR---LHSPDRFFPDDDYVPHMNNTARRPSMD 306
I L + R R G H+ DR N T +
Sbjct: 197 EIGKCLIDDWQRGTGTVLYNPAVRVSVGGSGQPSHNGDRTGGSYGGGRSYNRTG-----N 251
Query: 307 GARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVGRVIGES 366
GA FS S Y R SG + ++D + +++ P D VG +IG
Sbjct: 252 GADFS---EPSGGYNRRGSGDNANRSIPMVTDDGEEVQTQNISI----PADMVGCIIGRG 304
Query: 367 EGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEAL 414
+ ++ G + +A P D + E++ TI S + + L+ E L
Sbjct: 305 GSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENL 354
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 427 DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMRRSTGANIQILSREEVPACVSGTDELVQI 485
D + + T + +P+ +GC+ GR GS +SE+RRS+GA I I + P +G + + I
Sbjct: 281 DGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDETG-ERMFTI 336
Query: 486 VGEIQAARDALVEVTTRLRSYLYR 509
+G QA AL + L + R
Sbjct: 337 MGSAQANEKALYLLYENLEAEKMR 360
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 83 ILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDE-ERIIEISDTRRRDPEGRMP 141
I+ K G +IGK G IK +++ +GA + V + P E E+ + I+ DP+
Sbjct: 200 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITG----DPQ---- 251
Query: 142 SFSPAQEALF-LIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVSR 200
A++ ++ LI ++ ++ GG E Y G G N ++V R
Sbjct: 252 KVEHAKQLVYELIAEKEMQMFHRGGRGSERPGNYTNDNGFN----HGPANNDGVEVLVPR 307
Query: 201 MHVGCLLGKGGKIIEQMRMETKTQIRI 227
VG ++GKGG +I++++ E+ +++
Sbjct: 308 AAVGVVIGKGGDMIKKIQAESGAKVQF 334
>gi|268573738|ref|XP_002641846.1| Hypothetical protein CBG16520 [Caenorhabditis briggsae]
Length = 563
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 44/195 (22%)
Query: 50 NNIMNNNTSINNSNNRANSNPKDPSLMVTTTY------RILCHDMKAGGVIGKSGSIIKS 103
+NIMNN + R+ + P ++ + AG +IGK G +IK
Sbjct: 197 HNIMNNTQGTTPMHQRSGNQPSGGQYGGYGGQDTQAKGEVIVPRLSAGMIIGKGGEMIKR 256
Query: 104 IRQHTGAWINVH-ELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDG 162
+ TG I ++ P E+R+ I TR + A E + I +R ++++G
Sbjct: 257 LAMETGTKIQFKPDVNPNSEDRVAVIMGTRDQ--------IYQATERITEIVNRAMKNNG 308
Query: 163 GGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRM---VVSRMHV-----GCLLGKGGKII 214
G G VA+ M V +HV G ++GKGG+ I
Sbjct: 309 APG---------------------SGTGSVASVMPGQTVFYLHVPSGKCGLVIGKGGENI 347
Query: 215 EQMRMETKTQIRILP 229
+Q+ ET + P
Sbjct: 348 KQIERETGATCGLAP 362
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 135/337 (40%), Gaps = 67/337 (19%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R L +AG VIGK G+ + ++RQ + V +++P ERI+ + G
Sbjct: 14 TLRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVV--------GP 65
Query: 140 MPSFSPAQEALFLIHDRILES----DGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATR 195
+P+ + +A LI +LES G EE A R
Sbjct: 66 LPNVA---KAYALIAKNLLESTQTITSNGNLDSTEES-------------------TAIR 103
Query: 196 MVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVK 255
++V+ +G ++GK G I + ++ + +I+ +P+ +E +V++ G ++ +
Sbjct: 104 LLVAHQLIGSIIGKAGAKIRE--IQEASGAKIVVSKEMMPQS---TERVVEIYGLVDAIH 158
Query: 256 NAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTARRPSMDGARFSGSNY 315
A+ I ++ R + R+ D P ++ + +R +G N
Sbjct: 159 IAIYHIGVCMKSDNERAAGIIPYDPQNSLRY----DSSPFSSSAI----ISTSRSTGRNS 210
Query: 316 RSNNYGPR---------------PSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVG 360
+N G R SG + G AP S + P + M D +G
Sbjct: 211 LTNAIGRRHSSNNSSVSSNSIRAMSGSTF--GGAPASSTENP---DTRTCVMTVQSDMIG 265
Query: 361 RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITI 397
++G+ + ++ G L VA+ V G +++ ITI
Sbjct: 266 CLMGKGGSHITQIRRLSGAKLHVAEQVSGRNDREITI 302
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 78 TTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINV-HELIPGDEERIIEI 128
+T R+L G +IGK+G+ I+ I++ +GA I V E++P ER++EI
Sbjct: 99 STAIRLLVAHQLIGSIIGKAGAKIREIQEASGAKIVVSKEMMPQSTERVVEI 150
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 55/350 (15%)
Query: 80 TYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 139
T R + +AG +IGK G + +R TG V +++ G +R++ I+ EG
Sbjct: 47 TVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG----GCEGI 102
Query: 140 MPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGVGGGGFRGGGNRVATRMVVS 199
+++ AL E G GG V G ++++S
Sbjct: 103 SKAYAVVARALL-----------------EGAPSMGMGGVVSNNGTH------PIKLLIS 139
Query: 200 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSMSEEIVQVVGDINNVKNAVA 259
+G ++G+ G I+ ++ + +R++ + LP+ +E +V+V G ++ AV
Sbjct: 140 HNQMGTIIGRQGLKIKH--IQDVSGVRMVAQKEMLPQS---TERVVEVQGTPEGIQRAVW 194
Query: 260 IISSRLRESQHRD----------RSHFHG--RLHSPDRFFPDDDYVPHMNNTARRPSMDG 307
I L + R R+ G ++ S + + + ++ R +G
Sbjct: 195 EICKCLIDDWQRGTGTVLYNPVVRTQPAGATQMGSSGAGYGTSNRGDYSSSRVTRTG-NG 253
Query: 308 ARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLC-PIDKVGRVIGES 366
A FS RS N R S P D GE++ + + P D VG +IG +
Sbjct: 254 ADFSNGGGRSYN---RRSDSDAANRGPPTHDE----NGEEIQTQNISIPADMVGCIIGRA 306
Query: 367 EGIVELLQNEIGVDLKVAD-PVDGSDEQIITI-SSEEGPDDELFPAQEAL 414
+ ++ G + +A P D + E++ TI S + + LF E L
Sbjct: 307 GSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLYENL 356
>gi|296420990|ref|XP_002840050.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636260|emb|CAZ84241.1| unnamed protein product [Tuber melanosporum]
Length = 386
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 348 LVFRMLCPIDKVGRVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDEL 407
L R + + G +IG++ V L+ E GV V+ V G ++++T++ GP D +
Sbjct: 52 LTLRAIVSSKEAGVIIGKAGKNVADLREETGVKAGVSKVVTGIPDRVLTVT---GPLDGV 108
Query: 408 FPA----QEALLHIQTRIVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGAN 463
A + LL + T RLL+ +++G + GR G + +
Sbjct: 109 AKAYAMVSQTLLDSPPSTIGG-GPPPGPGTLRLLISHNQMGTIIGRQGLKIKHIQDVSGT 167
Query: 464 IQILSREEVPACVSGTDELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGP 523
++E +P T+ +V + G+ +A R A+ E+ L R P+ P
Sbjct: 168 RMTAAKEMLPQS---TERVVDVAGDPEAIRTAIWEIGKCLVDDWQRGTGTVLYNPAVRSP 224
Query: 524 TGSALV 529
GS+ V
Sbjct: 225 GGSSSV 230
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,351,594,013
Number of Sequences: 23463169
Number of extensions: 537055396
Number of successful extensions: 3702438
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6648
Number of HSP's successfully gapped in prelim test: 2778
Number of HSP's that attempted gapping in prelim test: 3094373
Number of HSP's gapped (non-prelim): 358743
length of query: 678
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 528
effective length of database: 8,839,720,017
effective search space: 4667372168976
effective search space used: 4667372168976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)