BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 005759
         (678 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
 gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
          Length = 1102

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 282/333 (84%), Positives = 311/333 (93%), Gaps = 1/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVWADW+NPYLTLDP+YEAAQIEVFGQM+LQGYIYRG+KPVHWSPSS TALAE
Sbjct: 247 MASFKRYGVWADWDNPYLTLDPDYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSHTALAE 306

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGHVS+SIYA+FR+ SAPP++  LL EF PDL LA+WTTTPWTVPANAAVAVN+
Sbjct: 307 AELEYPEGHVSKSIYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAAVAVNS 366

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQYAVVE+QSL E  S +P NKK R GNVL++QKK+F+IVASDL+PTLEAKW  KLVIK
Sbjct: 367 KLQYAVVEVQSL-EDASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVKLVIK 425

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KTL+GSDLENCRY+HP+DNR+CPVVIGGDYITTESGTGLVHTAPGHGQEDY+T +KYGLP
Sbjct: 426 KTLSGSDLENCRYIHPIDNRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITGMKYGLP 485

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVDD GKFTEEA  FSGLDVLG+GNVAVVKYLDEQMS++MEE YEHKYPYDWRTKKP
Sbjct: 486 VLSPVDDGGKFTEEAAPFSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKP 545

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQAAMDAIG VKW+PPQ
Sbjct: 546 TIFRATEQWFASVEGFRQAAMDAIGHVKWIPPQ 578



 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 266/344 (77%), Positives = 305/344 (88%)

Query: 335  APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSIS 394
            AP YGADVLRLWVSSVDYTGDVMIGPQ+LRQMSDIYRKLRGTLRYLLGNLHDW+  +++S
Sbjct: 759  APAYGADVLRLWVSSVDYTGDVMIGPQILRQMSDIYRKLRGTLRYLLGNLHDWKADDAVS 818

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            YDDLPMID++AL+QLEN+VKNIRESYE+YQFFKIFQIIQRF+IVDLSNFYFDVAKDRLY 
Sbjct: 819  YDDLPMIDKHALYQLENVVKNIRESYENYQFFKIFQIIQRFVIVDLSNFYFDVAKDRLYV 878

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
            GGTT+FTR+SCQTVL+AHLLSIV+V+APILPHLAEDVWQNLPF + LEDGS A+FVFESK
Sbjct: 879  GGTTTFTRKSCQTVLAAHLLSIVKVVAPILPHLAEDVWQNLPFPHVLEDGSVAKFVFESK 938

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            WP  +EKW +FP+ EI FWGKILELRTEVNKVLE AR GKLIGSSLEAKVYL+  DA LA
Sbjct: 939  WPASNEKWLSFPIEEIDFWGKILELRTEVNKVLEAARMGKLIGSSLEAKVYLYASDARLA 998

Query: 575  SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
            S+  E+C A +DAD L RIFI SQVEV+      LI  IP++GE+L+EG ++VWIGVSRA
Sbjct: 999  SKFHEICAASNDADPLHRIFITSQVEVIELLNEKLIETIPHAGEFLIEGGNRVWIGVSRA 1058

Query: 635  EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            EG KCERCWNY+  VGSFVEHPTLC RCY ++A+QP P++AA+S
Sbjct: 1059 EGMKCERCWNYTADVGSFVEHPTLCGRCYRIVAMQPEPAVAAIS 1102


>gi|147804918|emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
          Length = 1088

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 283/346 (81%), Positives = 309/346 (89%), Gaps = 1/346 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 744  KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 803

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 804  VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 863

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 864  YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 923

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP L+EKW TFP  EI FWGKILELRTE NKVLEVAR GKLIGSSL+AKVYL   DAS
Sbjct: 924  SRWPALNEKWLTFPTEEIDFWGKILELRTETNKVLEVARGGKLIGSSLDAKVYLHASDAS 983

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            LA RLREMC+  +DADTL RIFI SQVE+L S  + L++NIPY+GEYL++GK+K+WIGVS
Sbjct: 984  LAPRLREMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1043

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA+GSKCERCWNYS QVGSF EHPTLC RCY V+ VQ +P+MAAVS
Sbjct: 1044 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNVQ-LPAMAAVS 1088



 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/333 (81%), Positives = 305/333 (91%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVW DWNNPYLTLDPEYEA+QIEVFGQM+LQGYIYRG+KPVHWSPSSRTALAE
Sbjct: 201 MASFKRYGVWGDWNNPYLTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAE 260

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+FR+VSAP ++   L +FLPDL LA+WTTTPWT+PANAAVAVNA
Sbjct: 261 AELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNA 320

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+ S LE  S +  N+K R GN LK+QK +F++VASDLVPTLEAKWG KLVIK
Sbjct: 321 KLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIK 380

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KTL GSDLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHGQEDYVT +KYGLP
Sbjct: 381 KTLLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLP 440

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVDD+GKFTEEAG+FSGLDVLGDGN AVV++LDE +S+IMEEPY+HKYPYDWRTKKP
Sbjct: 441 ILSPVDDDGKFTEEAGQFSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 500

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQ AM AIGQV W+P Q
Sbjct: 501 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQ 533


>gi|225432320|ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1105

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 282/346 (81%), Positives = 309/346 (89%), Gaps = 1/346 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 761  KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 820

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 821  VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 880

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 881  YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 940

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP L+EKW TFP  EI FWGKILELRTE NKVLEVAR GKLIGSSL+AKVYL   DAS
Sbjct: 941  SRWPALNEKWLTFPTEEIDFWGKILELRTETNKVLEVARGGKLIGSSLDAKVYLHASDAS 1000

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            LA RL+EMC+  +DADTL RIFI SQVE+L S  + L++NIPY+GEYL++GK+K+WIGVS
Sbjct: 1001 LAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1060

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA+GSKCERCWNYS QVGSF EHPTLC RCY V+ VQ +P+MAAVS
Sbjct: 1061 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNVQ-LPAMAAVS 1105



 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/333 (81%), Positives = 305/333 (91%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVW DWNNPYLTLDPEYEA+QIEVFGQM+LQGYIYRG+KPVHWSPSSRTALAE
Sbjct: 250 MASFKRYGVWGDWNNPYLTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAE 309

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+FR+VSAP ++   L +FLPDL LA+WTTTPWT+PANAAVAVNA
Sbjct: 310 AELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNA 369

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+ S LE  S +  N+K R GN LK+QK +F++VASDLVPTLEAKWG KLVIK
Sbjct: 370 KLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIK 429

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KTL GSDLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHGQEDYVT +KYGLP
Sbjct: 430 KTLLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLP 489

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVDD+GKFTEEAG+FSGLDVLGDGN AVV++LDE +S+IMEEPY+HKYPYDWRTKKP
Sbjct: 490 ILSPVDDDGKFTEEAGQFSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 549

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQ AM AIGQV W+P Q
Sbjct: 550 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQ 582


>gi|297736880|emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 282/346 (81%), Positives = 309/346 (89%), Gaps = 1/346 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 877  KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 936

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 937  VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 996

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 997  YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 1056

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP L+EKW TFP  EI FWGKILELRTE NKVLEVAR GKLIGSSL+AKVYL   DAS
Sbjct: 1057 SRWPALNEKWLTFPTEEIDFWGKILELRTETNKVLEVARGGKLIGSSLDAKVYLHASDAS 1116

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            LA RL+EMC+  +DADTL RIFI SQVE+L S  + L++NIPY+GEYL++GK+K+WIGVS
Sbjct: 1117 LAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDDELVKNIPYTGEYLIQGKNKIWIGVS 1176

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA+GSKCERCWNYS QVGSF EHPTLC RCY V+ VQ +P+MAAVS
Sbjct: 1177 RADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVNVQ-LPAMAAVS 1221



 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/333 (81%), Positives = 305/333 (91%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVW DWNNPYLTLDPEYEA+QIEVFGQM+LQGYIYRG+KPVHWSPSSRTALAE
Sbjct: 366 MASFKRYGVWGDWNNPYLTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAE 425

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+FR+VSAP ++   L +FLPDL LA+WTTTPWT+PANAAVAVNA
Sbjct: 426 AELEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNA 485

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+ S LE  S +  N+K R GN LK+QK +F++VASDLVPTLEAKWG KLVIK
Sbjct: 486 KLQYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIK 545

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KTL GSDLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHGQEDYVT +KYGLP
Sbjct: 546 KTLLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLP 605

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVDD+GKFTEEAG+FSGLDVLGDGN AVV++LDE +S+IMEEPY+HKYPYDWRTKKP
Sbjct: 606 ILSPVDDDGKFTEEAGQFSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKP 665

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQ AM AIGQV W+P Q
Sbjct: 666 TIFRATEQWFASVEGFRQVAMTAIGQVTWIPAQ 698


>gi|224107153|ref|XP_002314391.1| predicted protein [Populus trichocarpa]
 gi|222863431|gb|EEF00562.1| predicted protein [Populus trichocarpa]
          Length = 981

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/344 (80%), Positives = 309/344 (89%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQ+SDIYRKLRGTLRYLLGNLHDW  GN+
Sbjct: 636 KEAPGYGADVLRLWVSSVDYTGDVMIGTQVLRQISDIYRKLRGTLRYLLGNLHDWEAGNA 695

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           ISY+DLPMID++ALFQLEN+V  IRESY++YQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 696 ISYNDLPMIDKHALFQLENVVNTIRESYDNYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 755

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y GGTTS TRRSCQTVL+AHLLSI RVIAPILPHLAEDVWQNLPF +T++DGSAA+FVFE
Sbjct: 756 YVGGTTSHTRRSCQTVLAAHLLSIARVIAPILPHLAEDVWQNLPFQFTVQDGSAAKFVFE 815

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
           SKWP  +EKW  FP+ EI FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL   DAS
Sbjct: 816 SKWPATNEKWLAFPIEEIDFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLHASDAS 875

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
           LASRL EMCTA +DAD L RIFI SQ E+L    + +++ IPYSGEYL++G ++VWIGVS
Sbjct: 876 LASRLHEMCTASNDADALHRIFITSQAEMLHHVEDEVLKAIPYSGEYLIQGSERVWIGVS 935

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAA 676
           RAEG KCERCWNY+ QVGSFVEHPTLC RCY+V+AVQP P+++A
Sbjct: 936 RAEGLKCERCWNYTPQVGSFVEHPTLCGRCYKVVAVQPEPAVSA 979



 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/333 (82%), Positives = 305/333 (91%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKR+GVW DW  PYLTLDPEYEAAQIEVFGQM+ QGYIYRG+KPVHWSPSSRTALAE
Sbjct: 125 MASFKRFGVWGDWERPYLTLDPEYEAAQIEVFGQMAFQGYIYRGRKPVHWSPSSRTALAE 184

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGHVS+SIYA+FR+VSAPP++ GLL EF PDL LA+WTTTPWTVPANAAVAVNA
Sbjct: 185 AELEYPEGHVSKSIYAIFRVVSAPPTSDGLLEEFFPDLCLAIWTTTPWTVPANAAVAVNA 244

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQYAV+E+QS     S +  NKK R G+VLK+QKK F+IVASDLVPTLEAKWG KLV+K
Sbjct: 245 KLQYAVIEVQSFSGDASTSSGNKKQRLGHVLKEQKKPFLIVASDLVPTLEAKWGVKLVVK 304

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KTL GSDLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHG+EDYVT LKYGLP
Sbjct: 305 KTLLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGREDYVTGLKYGLP 364

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I+SPVDD+GKFTEEA +FSGLDVLGDGN+AV+KYLDEQM LIMEE Y+H YPYDWRTKKP
Sbjct: 365 IISPVDDDGKFTEEAVQFSGLDVLGDGNIAVMKYLDEQMLLIMEESYQHNYPYDWRTKKP 424

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQ+AM+AI QVKW+PPQ
Sbjct: 425 TIFRATEQWFASVEGFRQSAMEAISQVKWIPPQ 457


>gi|356564073|ref|XP_003550281.1| PREDICTED: isoleucyl-tRNA synthetase-like [Glycine max]
          Length = 1093

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/335 (80%), Positives = 301/335 (89%), Gaps = 1/335 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M+SFKRYGVWADWN+PYLTL+PEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 238 MSSFKRYGVWADWNDPYLTLNPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 297

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPE HVSRSIYA+FR+VSAP + S LL EF P+L LAVWTTTPWT+PANAAVAVN 
Sbjct: 298 AELEYPEKHVSRSIYAIFRVVSAPLTPSSLLQEF-PNLYLAVWTTTPWTIPANAAVAVNP 356

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KL+YAVVEI+SL E D ++  NKK   G VLKD+K  F+IVAS+LVP+LEAKWG KLV+K
Sbjct: 357 KLEYAVVEIKSLPEPDPSSGGNKKKGLGLVLKDEKLPFLIVASELVPSLEAKWGVKLVVK 416

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               GS+LEN RY+HPVD+R+CPVVIGGDYITTE+GTGLVHTAPGHGQEDYVT  KYGLP
Sbjct: 417 TRQLGSELENYRYIHPVDDRECPVVIGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLP 476

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVDD+G+FTEEAG+FSGLDVLG+GN AVVKYLDE +SLIMEE YEHKYPYDWRTKKP
Sbjct: 477 ILSPVDDDGRFTEEAGQFSGLDVLGEGNTAVVKYLDEHLSLIMEESYEHKYPYDWRTKKP 536

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 335
           TIFRATEQWFASVEGFR  AMDAIG VKWVPPQ A
Sbjct: 537 TIFRATEQWFASVEGFRHTAMDAIGHVKWVPPQAA 571



 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 251/346 (72%), Positives = 303/346 (87%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +E+P YGADVLRLWVSSVDYT DVMIGPQ+LRQMS++YRKLRGTLRYLL NLHDW+V  +
Sbjct: 748  RESPAYGADVLRLWVSSVDYTSDVMIGPQILRQMSEVYRKLRGTLRYLLANLHDWKVKYT 807

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y +LP IDQ+ALFQLEN+VK I+ +YE+YQFFKIFQI+QRF+IVDLSNFYFDVAKDRL
Sbjct: 808  VPYHELPRIDQHALFQLENVVKAIQGNYENYQFFKIFQILQRFVIVDLSNFYFDVAKDRL 867

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG+TS+TR+SCQTVL+AHLLSIVR+IAPILPHLAEDVWQNLPF Y  +DGS AE+VFE
Sbjct: 868  YVGGSTSYTRKSCQTVLAAHLLSIVRIIAPILPHLAEDVWQNLPFQYITQDGSIAEYVFE 927

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP+ +E+    PV EI FW  ILELRTEVN+VLEVARTGKLIG+SL+A+V+++T DA 
Sbjct: 928  SRWPISNERRLALPVEEINFWENILELRTEVNRVLEVARTGKLIGASLDARVHIYTSDAR 987

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            LAS+L E+  AK+DADTL+R+ I SQ E+LPS  +  I NIPYSGE L++GK+K+WIG+S
Sbjct: 988  LASQLCELSAAKNDADTLRRLLITSQAEILPSLDDEQIVNIPYSGECLIQGKNKIWIGIS 1047

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA GSKCERCWNYS QVGSF++HPTLCSRC++V+AVQ  P +AAVS
Sbjct: 1048 RAVGSKCERCWNYSEQVGSFLDHPTLCSRCHDVVAVQMPPQVAAVS 1093


>gi|334188274|ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1279

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/347 (75%), Positives = 304/347 (87%), Gaps = 2/347 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 931  KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 990

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 991  VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 1050

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 1051 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 1110

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWP L+E+W +FP  ++ FW ++LELRTEVNKVLE+AR  K+IGSSLEAKVYL T DA 
Sbjct: 1111 LKWPTLNEQWLSFPAEDVLFWQRLLELRTEVNKVLELARNEKMIGSSLEAKVYLHTADAG 1170

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            +A++L EM  AK++ADTLQRIFI SQVEVL S    +I ++ ++GEY VEG++KVWIGVS
Sbjct: 1171 MAAKLLEMSEAKNEADTLQRIFITSQVEVLSSMEKEMISSVQHTGEY-VEGENKVWIGVS 1229

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI-PSMAAVS 678
            RAEGSKCERCWNYS QVGSF +HPTLC RC+ V+   P  P++AAV+
Sbjct: 1230 RAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 1276



 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/333 (78%), Positives = 294/333 (88%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 422 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 481

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 482 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 539

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 540 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 599

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 600 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 659

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 660 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 719

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 720 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 752


>gi|22327660|ref|NP_199714.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1093

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/347 (75%), Positives = 304/347 (87%), Gaps = 2/347 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745  KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805  VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865  YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWP L+E+W +FP  ++ FW ++LELRTEVNKVLE+AR  K+IGSSLEAKVYL T DA 
Sbjct: 925  LKWPTLNEQWLSFPAEDVLFWQRLLELRTEVNKVLELARNEKMIGSSLEAKVYLHTADAG 984

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            +A++L EM  AK++ADTLQRIFI SQVEVL S    +I ++ ++GEY VEG++KVWIGVS
Sbjct: 985  MAAKLLEMSEAKNEADTLQRIFITSQVEVLSSMEKEMISSVQHTGEY-VEGENKVWIGVS 1043

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI-PSMAAVS 678
            RAEGSKCERCWNYS QVGSF +HPTLC RC+ V+   P  P++AAV+
Sbjct: 1044 RAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 1090



 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/333 (78%), Positives = 294/333 (88%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566


>gi|10177193|dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 988

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/347 (75%), Positives = 304/347 (87%), Gaps = 2/347 (0%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 640 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 699

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 700 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 759

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 760 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 819

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            KWP L+E+W +FP  ++ FW ++LELRTEVNKVLE+AR  K+IGSSLEAKVYL T DA 
Sbjct: 820 LKWPTLNEQWLSFPAEDVLFWQRLLELRTEVNKVLELARNEKMIGSSLEAKVYLHTADAG 879

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
           +A++L EM  AK++ADTLQRIFI SQVEVL S    +I ++ ++GEY VEG++KVWIGVS
Sbjct: 880 MAAKLLEMSEAKNEADTLQRIFITSQVEVLSSMEKEMISSVQHTGEY-VEGENKVWIGVS 938

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI-PSMAAVS 678
           RAEGSKCERCWNYS QVGSF +HPTLC RC+ V+   P  P++AAV+
Sbjct: 939 RAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 985



 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/333 (75%), Positives = 282/333 (84%), Gaps = 22/333 (6%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 151 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 210

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 211 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 268

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS                     +Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 269 KLQYSVVEVQSF--------------------NQQKLFVIVATDLVPALEAKWGVKLSIS 308

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 309 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 368

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 369 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 428

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 429 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 461


>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1095

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/333 (79%), Positives = 295/333 (88%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKVVGG--AKTSLLDEFVPNICLAVWTTTPWTMPANAAVAVNA 353

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS  E +SA   NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL+I 
Sbjct: 354 KLQYSVVEVQSFSEDESAVTGNKKKMPGKVLKNQQKLFVIVATDLVPALEAKWGVKLIIS 413

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LISPVDDEGKFTEEAGRFRGLSVLGEGNSAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPDQ 566



 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/338 (73%), Positives = 290/338 (85%), Gaps = 2/338 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N 
Sbjct: 745  KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDND 804

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y+DLP+IDQ+ALFQLEN+VKNI E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805  VPYEDLPIIDQHALFQLENVVKNIHECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAA+FVFE
Sbjct: 865  YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAKFVFE 924

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWP ++E+W +FP  ++ FW ++L     VNKVLE+AR  K+IGSSLEAKVYL+T DA 
Sbjct: 925  LKWPTVNEQWLSFPAEDVLFWQRLLR-GPRVNKVLELARNDKMIGSSLEAKVYLYTADAG 983

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            +A++L EM  AK++ADTLQRIFI SQVEVLPS    ++ ++ ++GEY VEG  KVWIGVS
Sbjct: 984  MATKLLEMSEAKNEADTLQRIFITSQVEVLPSMEKEMVSSVQHTGEY-VEGDKKVWIGVS 1042

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
            RAEGSKCERCWNYS QVGSF  HPTLC RC+ V+   P
Sbjct: 1043 RAEGSKCERCWNYSGQVGSFSNHPTLCGRCFNVIVANP 1080


>gi|79330394|ref|NP_001032042.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 955

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/333 (78%), Positives = 294/333 (88%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566



 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 190/207 (91%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILEL 539
            KWP L+E+W +FP  ++ FW ++LE+
Sbjct: 925 LKWPTLNEQWLSFPAEDVLFWQRLLEV 951


>gi|449513369|ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 300/333 (90%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVWADWNNPYLTL PEYEAAQIEVFGQM++QGYI+RG+KPVHWSPSSRTALAE
Sbjct: 238 MASFKRYGVWADWNNPYLTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAE 297

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH SRSIYA+FR+V   PS+ G+L EFLPDL LA+WTTTPWT+PANAAVAVNA
Sbjct: 298 AELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNA 357

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KL YA++E+ +  E  S    NKK RPGN+LK+ K+ F++VASDLVPTLEAKWG KLV+K
Sbjct: 358 KLHYAIIELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVK 417

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K L GS+LENC Y+HP+D ++C VVIGGDYITTE+GTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 418 KKLLGSELENCSYIHPIDKKECQVVIGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLP 477

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I+SPVDD+GKFTEEAG+FSGLDVLGDGN AVVKYLD+  SLI+EE YEHKYPYDWRTKKP
Sbjct: 478 IISPVDDDGKFTEEAGQFSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKP 537

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQAA+DAIG+VKW+PPQ
Sbjct: 538 TIFRATEQWFASVEGFRQAAVDAIGEVKWIPPQ 570



 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/346 (74%), Positives = 292/346 (84%), Gaps = 1/346 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQMSDIYRKLRGTLR+LLGNLHDW   N+
Sbjct: 749  KEAPGYGADVLRLWVSSVDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA 808

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP IDQ+ALFQLEN++ NIRESYESYQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 809  VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 868

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG+TSFTRRSCQTVL+AH++SI R+IAPILPHLAEDVWQNLPF +T +DGS A+FVFE
Sbjct: 869  YVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLPFQHTDDDGSVAKFVFE 928

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP L++   + P  EI  W  ILELRTEVNKVLE AR GKLIGSSLEAKV+L      
Sbjct: 929  SRWPSLNKTRLSLPEEEIDLWANILELRTEVNKVLEAARIGKLIGSSLEAKVHLHAPGDG 988

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            L+S+L EMC + HDADTLQRIFI SQVEV  S     I N+PY+GE L+ G +KVWIGVS
Sbjct: 989  LSSKLCEMCESNHDADTLQRIFITSQVEVHQSIETEHIENVPYTGECLI-GGNKVWIGVS 1047

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RAEGSKCERCWN+S +VGSF EHPTLC RC+ V+A  P P+MAAVS
Sbjct: 1048 RAEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVVAGHPEPAMAAVS 1093


>gi|449433407|ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 300/333 (90%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASFKRYGVWADWNNPYLTL PEYEAAQIEVFGQM++QGYI+RG+KPVHWSPSSRTALAE
Sbjct: 238 MASFKRYGVWADWNNPYLTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAE 297

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH SRSIYA+FR+V   PS+ G+L EFLPDL LA+WTTTPWT+PANAAVAVNA
Sbjct: 298 AELEYPEGHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNA 357

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KL YA++E+ +  E  S    NKK RPGN+LK+ K+ F++VASDLVPTLEAKWG KLV+K
Sbjct: 358 KLHYAIIELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVK 417

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K L GS+LENC Y+HP+D ++C VVIGGDYITTE+GTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 418 KKLLGSELENCSYIHPIDKKECQVVIGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLP 477

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I+SPVDD+GKFTEEAG+FSGLDVLGDGN AVVKYLD+  SLI+EE YEHKYPYDWRTKKP
Sbjct: 478 IISPVDDDGKFTEEAGQFSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKP 537

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFRQAA+DAIG+VKW+PPQ
Sbjct: 538 TIFRATEQWFASVEGFRQAAVDAIGEVKWIPPQ 570



 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/346 (74%), Positives = 292/346 (84%), Gaps = 1/346 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQMSDIYRKLRGTLR+LLGNLHDW   N+
Sbjct: 749  KEAPGYGADVLRLWVSSVDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA 808

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP IDQ+ALFQLEN++ NIRESYESYQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 809  VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 868

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG+TSFTRRSCQTVL+AH++SI R+IAPILPHLAEDVWQNLPF +T +DGS A+FVFE
Sbjct: 869  YVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLPFQHTDDDGSVAKFVFE 928

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            S+WP L++   + P  EI  W  ILELRTEVNKVLE AR GKLIGSSLEAKV+L      
Sbjct: 929  SRWPSLNKTRLSLPEEEIDLWANILELRTEVNKVLEAARIGKLIGSSLEAKVHLHAPGDG 988

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
            L+S+L EMC + HDADTLQRIFI SQVEV  S     I N+PY+GE L+ G +KVWIGVS
Sbjct: 989  LSSKLCEMCESNHDADTLQRIFITSQVEVHQSIETEHIENVPYTGECLI-GGNKVWIGVS 1047

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RAEGSKCERCWN+S +VGSF EHPTLC RC+ V+A  P P+MAAVS
Sbjct: 1048 RAEGSKCERCWNFSLRVGSFPEHPTLCKRCFNVVAGHPEPAMAAVS 1093


>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana]
          Length = 955

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 262/333 (78%), Positives = 293/333 (87%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADWNNPYLTLD EYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDTEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566



 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 190/207 (91%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILEL 539
            KWP L+E+W +FP  ++ FW ++LE+
Sbjct: 925 LKWPTLNEQWLSFPAEDVLFWQRLLEV 951


>gi|242063240|ref|XP_002452909.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
 gi|241932740|gb|EES05885.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
          Length = 839

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/334 (73%), Positives = 286/334 (85%), Gaps = 4/334 (1%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKRYGVWADW+NPYLTL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAE
Sbjct: 151 MKSFKRYGVWADWDNPYLTLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAE 210

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+SRSIYA F++ +  PS SG+L+EFLP++ LA+WTTTPWT+PANAAVAVN 
Sbjct: 211 AELEYSENHISRSIYAAFKITN--PSKSGMLDEFLPNVSLAIWTTTPWTIPANAAVAVNP 268

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK-KVFIIVASDLVPTLEAKWGTKLVI 179
           +L YAV E+QS+ E +S +   K+ + GN+L  +K K+F+IVASDLV TLE+KWG KL +
Sbjct: 269 ELTYAVAEVQSVFESESTS-GGKQRKVGNILSSEKGKLFVIVASDLVTTLESKWGVKLAV 327

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K+  GS LE+CRY HPV+  +C VV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGL
Sbjct: 328 HKSFPGSALEHCRYAHPVNGNECFVVLGGDYITTESGTGLVHTAPGHGQEDYITGLKYGL 387

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI+SPVDDEG FT EAG+FSGL VLG GN AVVKYLDEQ SLI+EEPY+HKYPYDWR+K+
Sbjct: 388 PIISPVDDEGNFTAEAGRFSGLSVLGAGNTAVVKYLDEQYSLILEEPYKHKYPYDWRSKE 447

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           PTIFRATEQWFASV+ FR AAMDAI +V WVP Q
Sbjct: 448 PTIFRATEQWFASVDDFRNAAMDAIRRVTWVPSQ 481



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 146/165 (88%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           +E PGYGADVLRLWVSSVDY+ DV+IGPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 660 REEPGYGADVLRLWVSSVDYSTDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPDNS 719

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y+DLP ID+YALFQLE ++ ++++SYESYQF+K++Q++QRF  V LSNFY DVAKDRL
Sbjct: 720 VPYNDLPKIDKYALFQLETVMASMKDSYESYQFYKVYQMLQRFATVGLSNFYLDVAKDRL 779

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 497
           Y GG  SFTR+SCQTVL AHLL +VR I+PI+PHLAEDVWQNLPF
Sbjct: 780 YVGGRVSFTRKSCQTVLMAHLLYLVRAISPIMPHLAEDVWQNLPF 824


>gi|357137856|ref|XP_003570515.1| PREDICTED: isoleucyl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 1061

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/334 (73%), Positives = 288/334 (86%), Gaps = 4/334 (1%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR G+WADW+NPYLTL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAE
Sbjct: 205 MNSFKRIGIWADWDNPYLTLSPEYEAAQLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAE 264

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS+SIYA F++ S  PS SGLL+EFLP++ LA+WTTTPWT+PANAAVAVN 
Sbjct: 265 AELEYSENHVSKSIYAAFKITS--PSKSGLLDEFLPNVCLAIWTTTPWTIPANAAVAVNP 322

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD-QKKVFIIVASDLVPTLEAKWGTKLVI 179
           +L YAVVE+QS+LE +S +   K+ + G++L    +K F+IVASDLV  LE+KWG KLVI
Sbjct: 323 ELTYAVVELQSVLESESTS-GGKQRKLGSILSSGNEKPFVIVASDLVSVLESKWGMKLVI 381

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K+  GS LE+CRY+HPV+  +C VVIGGDYITTESGTGLVHTAPGHGQEDY+T LKYGL
Sbjct: 382 RKSFPGSVLEHCRYIHPVNGDECSVVIGGDYITTESGTGLVHTAPGHGQEDYITGLKYGL 441

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI+SPVDDEG FT EAG+F+GL VLG GN AVVKYLDE +SLI+EEPY+HKYPYDWR+K+
Sbjct: 442 PIVSPVDDEGNFTAEAGQFNGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKE 501

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           PTIFRATEQWFASV+GFR AA+DAI +V WVP Q
Sbjct: 502 PTIFRATEQWFASVDGFRDAALDAIKRVTWVPSQ 535



 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 221/347 (63%), Positives = 279/347 (80%), Gaps = 2/347 (0%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +E PGYGADVLRLWVSSVDYTGDV+IGPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 714  KEEPGYGADVLRLWVSSVDYTGDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 773

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP IDQYALFQLEN+V ++++SY++YQF+KI+Q +QRF IV LSNFYFDVAKDRL
Sbjct: 774  VPYSDLPKIDQYALFQLENVVASMKDSYDNYQFYKIYQTLQRFAIVGLSNFYFDVAKDRL 833

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG  S+TR+SCQTVL+AHLL +VR IAPI+PHLAEDVWQNLPF +TLEDGS A+F F+
Sbjct: 834  YVGGRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDVWQNLPFEHTLEDGSVAKFAFD 893

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWP  +E+W +    ++ F   +LELR+EVNK+LE ARTGKLIGSSL+AKVYL   +A 
Sbjct: 894  LKWPNKNEEWLSVQKDDVDFLSIVLELRSEVNKILESARTGKLIGSSLDAKVYLHAGNAD 953

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              SRL+E+ +A +DAD L R+FI SQVE+LPS        + Y+G +      ++WIGV+
Sbjct: 954  TVSRLKELSSATNDADALHRLFITSQVEILPSLNEEATSGVSYTGTFRDTRTGEIWIGVT 1013

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV--QPIPSMAAV 677
            RA+G+KCERCWNY+  VGSF++HP+LC RC+ V+ +  QP P+ AAV
Sbjct: 1014 RADGAKCERCWNYTKDVGSFLDHPSLCLRCHGVIDLHPQPFPAAAAV 1060


>gi|218191678|gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
          Length = 1058

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/333 (71%), Positives = 282/333 (84%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADW+NPYLTL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAE
Sbjct: 204 MNSFKRFGVWADWDNPYLTLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAE 263

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S+YA F++ +   S  GLL EFLP+L LA+WTTTPWT+PANAAVAVN 
Sbjct: 264 AELEYSENHISKSMYAAFKITNL--SKPGLLEEFLPNLCLAIWTTTPWTIPANAAVAVNP 321

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           +L Y VVE+QS+LE +S +  N++     +    +K FIIVA+DLV  LE+KWGTKL+I+
Sbjct: 322 ELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKLIIQ 381

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K+  GS LE+CRY+HPV+  +C VV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLP
Sbjct: 382 KSFPGSALEHCRYIHPVNGNECSVVLGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLP 441

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I+SPVDDEG FT EAG+FSGL VLG GN AVV YLDEQ SLI+EEPY+HKYPYDWR+K+P
Sbjct: 442 IVSPVDDEGNFTAEAGQFSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEP 501

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASV+GFR AAMDAI +V W+P Q
Sbjct: 502 TIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQ 534



 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 227/346 (65%), Positives = 286/346 (82%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++ PGYGADVLRLWVSSVDYTGDV++GPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 713  KQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 772

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP ID+YALFQLEN+V ++++SYE+YQF+KI+QI+QRF IVDLSNFY DVAKDRL
Sbjct: 773  VRYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRL 832

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG  SFTR+SCQTVLSAHLL +VR IAPI+PHLAEDVWQNLPF +TL+DGS AEFVF 
Sbjct: 833  YVGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFN 892

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWPV +E+W + P  ++ F   ILELR+EVNK+LE ARTGKLIGSSLEAKVYL  ++A+
Sbjct: 893  LKWPVKNEEWLSVPKDDVDFLSVILELRSEVNKILESARTGKLIGSSLEAKVYLHAENAN 952

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              S+L+E+ +A +DAD L R+FI S+VE+LPS  +     + Y+G +  E    +WIGV+
Sbjct: 953  TVSKLKELVSATNDADALHRLFITSEVEILPSVSSETTSGVSYTGTFSSERTGNIWIGVT 1012

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA+G KCERCWNY+  VGSF++HPTLC+RC+ V+ + P+P+ AAVS
Sbjct: 1013 RADGEKCERCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS 1058


>gi|115449027|ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|222623772|gb|EEE57904.1| hypothetical protein OsJ_08590 [Oryza sativa Japonica Group]
          Length = 1058

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/333 (71%), Positives = 282/333 (84%), Gaps = 2/333 (0%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GVWADW+NPYLTL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAE
Sbjct: 204 MNSFKRFGVWADWDNPYLTLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAE 263

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S+YA F++ +   S  GLL EFLP+L LA+WTTTPWT+PANAAVAVN 
Sbjct: 264 AELEYSENHISKSMYAAFKITNL--SKPGLLEEFLPNLCLAIWTTTPWTIPANAAVAVNP 321

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           +L Y VVE+QS+LE +S +  N++     +    +K FIIVA+DLV  LE+KWGTKL+I+
Sbjct: 322 ELTYVVVELQSVLESESTSGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKLIIQ 381

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K+  GS LE+CRY+HPV+  +C VV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLP
Sbjct: 382 KSFPGSALEHCRYIHPVNGNECSVVLGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLP 441

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I+SPVDDEG FT EAG+FSGL VLG GN AVV YLDEQ SLI+EEPY+HKYPYDWR+K+P
Sbjct: 442 IVSPVDDEGNFTAEAGQFSGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEP 501

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASV+GFR AAMDAI +V W+P Q
Sbjct: 502 TIFRATEQWFASVDGFRNAAMDAIRRVSWIPSQ 534



 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 227/346 (65%), Positives = 286/346 (82%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++ PGYGADVLRLWVSSVDYTGDV++GPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 713  KQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 772

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP ID+YALFQLEN+V ++++SYE+YQF+KI+QI+QRF IVDLSNFY DVAKDRL
Sbjct: 773  VRYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRL 832

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG  SFTR+SCQTVLSAHLL +VR IAPI+PHLAEDVWQNLPF +TL+DGS AEFVF 
Sbjct: 833  YVGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFN 892

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWPV +E+W + P  ++ F   ILELR+EVNK+LE ARTGKLIGSSLEAKVYL  ++A+
Sbjct: 893  LKWPVKNEEWLSVPKDDVDFLSVILELRSEVNKILESARTGKLIGSSLEAKVYLHAENAN 952

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              S+L+E+ +A +DAD L R+FI S+VE+LPS  +     + Y+G +  E    +WIGV+
Sbjct: 953  TVSKLKELVSATNDADALHRLFITSEVEILPSVSSETTSGVSYTGTFSSERTGNIWIGVT 1012

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            RA+G KCERCWNY+  VGSF++HPTLC+RC+ V+ + P+P+ AAVS
Sbjct: 1013 RADGEKCERCWNYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAVS 1058


>gi|326505354|dbj|BAK03064.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1064

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/334 (72%), Positives = 286/334 (85%), Gaps = 4/334 (1%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+R G+WADW+NPYLTL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAE
Sbjct: 206 MNSFERIGIWADWDNPYLTLSPEYEAAQLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAE 265

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS+SIYA F++ +  PS SGLL+EFLP++ LA+WTTTPWT+PANAAVAVN 
Sbjct: 266 AELEYSENHVSKSIYAAFKITN--PSNSGLLDEFLPNVCLAIWTTTPWTIPANAAVAVNP 323

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD-QKKVFIIVASDLVPTLEAKWGTKLVI 179
           +L YAVVE+Q +LE +S +   K+ + G++     +K FIIVASDLV  LE+KWG KLVI
Sbjct: 324 ELSYAVVELQPVLESESTS-GGKQRKLGSIFSSGNEKPFIIVASDLVSVLESKWGVKLVI 382

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K+  GS LE+CRY+HPV+  +C VVIGGDYITTESGTGLVHTAPGHGQEDY+T LKYGL
Sbjct: 383 RKSFPGSVLEHCRYLHPVNGNECSVVIGGDYITTESGTGLVHTAPGHGQEDYLTGLKYGL 442

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI+SPVDDEG FT EAG+FSGL VLG GN AVVKYLDE +SLI+EEPY+HKYPYDWR+K+
Sbjct: 443 PIVSPVDDEGNFTAEAGQFSGLSVLGAGNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKE 502

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           PTIFRATEQWFASV+GFR AA+DAI +V WVP Q
Sbjct: 503 PTIFRATEQWFASVDGFRDAALDAIKRVTWVPSQ 536



 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/338 (63%), Positives = 269/338 (79%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +E P YGADVLRLWVSSVDYTGDV+IG Q+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 715  KEEPPYGADVLRLWVSSVDYTGDVLIGSQILRQMSDMYRKLRGTMRFLLANLHDWKPENS 774

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + Y DLP IDQYALFQLEN+V ++++SY+ YQF+KI+Q +QRF IV LSNFYFDVAKDRL
Sbjct: 775  VPYSDLPKIDQYALFQLENVVASMKDSYDHYQFYKIYQTLQRFAIVGLSNFYFDVAKDRL 834

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GG  S+TR+SCQTVL+AHLL +VR IAPI+PHLAED+WQNLPF +TLEDGS AEF F+
Sbjct: 835  YVGGRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDIWQNLPFQHTLEDGSVAEFAFD 894

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             KWP  +E+W +    ++ F   ILELR+EVNK+LE ARTGKLIG+SL+AKVYL  ++  
Sbjct: 895  LKWPDRNEEWCSVQKDDVDFLSVILELRSEVNKILESARTGKLIGASLDAKVYLHAENPD 954

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              S+L+E+ +A +DAD L R+FI SQVE+LPS        + Y G++      ++WIGV+
Sbjct: 955  TVSKLKELASATNDADALHRLFITSQVEILPSLSEETTSGVSYMGKFSNPLTGEIWIGVT 1014

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
            RA+G KCERCW Y+  VG FV+HPTLCSRC+ V+ +QP
Sbjct: 1015 RADGVKCERCWVYTKDVGLFVDHPTLCSRCHGVIDLQP 1052


>gi|413939182|gb|AFW73733.1| hypothetical protein ZEAMMB73_232602 [Zea mays]
          Length = 537

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 219/346 (63%), Positives = 278/346 (80%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           +E PGYGADVLRLWVSSVDYT DV+IGPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 192 REEPGYGADVLRLWVSSVDYTTDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPDNS 251

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y+DLP ID+YALF LE ++ ++++SYESYQF+K++QI+QRF  V LSNFY DVAKDRL
Sbjct: 252 VPYNDLPKIDKYALFHLETVMTSMKDSYESYQFYKVYQILQRFATVGLSNFYLDVAKDRL 311

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y GG  SFTR+SCQTVL AHLL +VR I+PI+PHLAEDVWQNLPF YTL+DGS A FVF+
Sbjct: 312 YVGGRVSFTRKSCQTVLMAHLLYLVRAISPIMPHLAEDVWQNLPFQYTLQDGSLANFVFD 371

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            KWP  +E+W + P  ++ F G ILELR+EVNK+LE ARTGKLIGSSL+AKVYL T+ + 
Sbjct: 372 LKWPEKNEEWLSAPKDDVDFLGVILELRSEVNKILENARTGKLIGSSLDAKVYLHTESSD 431

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              +L+E+ +A +DAD L R+FI SQV++LP     +  ++PY+G++       +WIGV+
Sbjct: 432 TVLKLKELSSASNDADALHRLFITSQVDILPILNEEITSSVPYTGKFSNPRTGVIWIGVT 491

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
           RA+G+KCERCWNY+  VGSF +HPTLC RCY V+ +Q  P+ AAVS
Sbjct: 492 RADGAKCERCWNYTQDVGSFHDHPTLCVRCYGVIELQTQPAAAAVS 537


>gi|168008836|ref|XP_001757112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691610|gb|EDQ77971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1002

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/329 (67%), Positives = 255/329 (77%), Gaps = 17/329 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR+GVW DW NPYLTL P+YEAAQI VFG+M L G+IYRG+KPVHWSPSS TALAEAE
Sbjct: 155 SFKRFGVWGDWENPYLTLSPDYEAAQIGVFGKMFLNGHIYRGRKPVHWSPSSGTALAEAE 214

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH S+SIY VF+M+    +    L   LP +G+A+WTTTPWT+PANAAVAVN KL
Sbjct: 215 LEYPEGHTSKSIYVVFKMIELSDNFPESLKPLLPSMGVAIWTTTPWTIPANAAVAVNDKL 274

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVEI+                 G+ L D +   +IVA+DLVP LEAKWG  L +K T
Sbjct: 275 TYAVVEIK-----------------GSALLDPQVKHVIVAADLVPALEAKWGVSLEVKGT 317

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS LE+ RY HP++ R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLP+L
Sbjct: 318 FPGSALEHSRYRHPLEERENPVVVGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLPLL 377

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD G FT EAG+FSGL+VLG+GN +VV  LD    L+MEE Y HKYPYDWRTKKPTI
Sbjct: 378 SPVDDNGNFTSEAGQFSGLNVLGEGNSSVVTALDSHSVLLMEEAYVHKYPYDWRTKKPTI 437

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFRQ A++AI  V+WVP
Sbjct: 438 FRATEQWFASVEGFRQTALEAIRSVQWVP 466



 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/347 (56%), Positives = 253/347 (72%), Gaps = 12/347 (3%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           PGYGADVLRLWVSSVDYTGDVMIGPQ++RQMS+IYRKLRGTLRYLL NLHDW+   +S++
Sbjct: 650 PGYGADVLRLWVSSVDYTGDVMIGPQIVRQMSEIYRKLRGTLRYLLSNLHDWKPEEHSVA 709

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y+DLP +DQYALFQL ++V  I +SY  YQF++ FQ++QRFI+VDLSNFYFD AKDRLYT
Sbjct: 710 YEDLPKLDQYALFQLASVVDGIEDSYNKYQFYRFFQLMQRFIVVDLSNFYFDTAKDRLYT 769

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
           GG  S+TRRSCQ+VL+A LL +VR IAP+LPH+AED W +LPF++ L++GS AE VFE+ 
Sbjct: 770 GGRESYTRRSCQSVLAAQLLCLVRAIAPVLPHMAEDAWSHLPFSFHLDNGSLAETVFEAA 829

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP +D +W +    ++  W  +L++R  VN+ LE AR  KLIG+SL+AKVYL      L 
Sbjct: 830 WPKVDARWLSVSEEDLSLWSALLQVRGLVNQKLEEARNNKLIGASLDAKVYLHASSKDLQ 889

Query: 575 SRLREMCTAKHDADTLQRIFIISQ----------VEVLPSTPNGLIRNIPYSGEYLVEGK 624
             L  MC +  D D L+RI + SQ          VEVLPS       N+ Y+    +E  
Sbjct: 890 QGLISMCGSS-DVDHLKRIVLTSQVQVLQLMTDHVEVLPSREEAESLNLSYASSTTLENG 948

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI 671
           + +W+GV+RA+G+KCERCWNY+  VG+   HP LC RCY V++  P+
Sbjct: 949 ETLWVGVARADGAKCERCWNYTPAVGTLEGHPGLCERCYGVISQYPV 995


>gi|376004426|ref|ZP_09782129.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
 gi|375327191|emb|CCE17882.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
          Length = 964

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/330 (65%), Positives = 257/330 (77%), Gaps = 17/330 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE Q    GDS +P   K             +++VA++LV  L A + T L +K T+
Sbjct: 264 YAVVETQ----GDSESPIEFK-------------YLLVAAELVERLSATFNTNLTVKATV 306

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 307 KGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILS 366

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI EEPY+HKYPYDWRTKKPTIF
Sbjct: 367 PVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIF 426

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 427 RATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 161/342 (47%), Positives = 222/342 (64%), Gaps = 22/342 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+Y+DLP +D+Y L ++  +   + +++E+YQFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYEDLPELDRYMLHRMTEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQNLP++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNLPYS------TPYLSVF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  LDE W+   + E  FW K+ E+R EVN+V+E AR  K++GSSL+AK+ L+  D 
Sbjct: 809 ESGWVRLDETWKKPELAE--FWVKLREIRAEVNQVMEQARKDKMVGSSLDAKILLYVADE 866

Query: 572 SLASRLREMC------TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
            L  +L  M          +  D L+ + I SQVE+L   P+ L  ++ Y  E      +
Sbjct: 867 KLRQQLAAMNPNPAEFKQNNGVDALRYLLICSQVELL-ENPDKLA-DLQYKSE-----SE 919

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + I V  AEG KC+RCWNYS  VG   EHPT+C RC   LA
Sbjct: 920 LMAIAVVNAEGEKCDRCWNYSVHVGESSEHPTICERCVSALA 961


>gi|423065828|ref|ZP_17054618.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
 gi|406712586|gb|EKD07770.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
          Length = 964

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/330 (65%), Positives = 257/330 (77%), Gaps = 17/330 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE Q    GDS +P   K             +++VA++LV  L A + T L +K T+
Sbjct: 264 YAVVETQ----GDSESPIEFK-------------YLLVAAELVERLSATFHTNLTVKATV 306

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 307 KGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILS 366

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI EEPY+HKYPYDWRTKKPTIF
Sbjct: 367 PVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIF 426

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 427 RATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 160/342 (46%), Positives = 222/342 (64%), Gaps = 22/342 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+Y+DLP +D+Y L ++  +   + +++E+YQFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYEDLPELDRYMLHRMTEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQN+P++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNIPYS------TPYLSVF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  LDE W+   + E  FW K+ E+R EVN+V+E AR  K++GSSL+AK+ L+  D 
Sbjct: 809 ESGWVRLDEAWKKPELAE--FWVKLREIRAEVNQVMEQARKDKMVGSSLDAKILLYVADE 866

Query: 572 SLASRLREMC------TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
            L  +L  M          +  D L+ + I SQVE+L   P+ L  ++ Y  E      +
Sbjct: 867 KLRQQLAAMNPNPAEFKQNNGVDALRYLLICSQVELL-ENPDKLA-DLQYKSE-----SE 919

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + I V  AEG KC+RCWNYS  VG   EHPT+C RC   LA
Sbjct: 920 LMAIAVVNAEGEKCDRCWNYSVHVGESSEHPTICERCVSALA 961


>gi|428300822|ref|YP_007139128.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
 gi|428237366|gb|AFZ03156.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
          Length = 964

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/330 (66%), Positives = 257/330 (77%), Gaps = 12/330 (3%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW +PYLTL PEYEAAQI+VFGQM L+GYIYRG KPV+WSPSSRTALAEAEL
Sbjct: 144 FKRYGVWGDWEHPYLTLTPEYEAAQIDVFGQMFLKGYIYRGLKPVNWSPSSRTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+YA F MVS        L E+LP LG+A+WTTTPWT+PAN AVAVN  L 
Sbjct: 204 EYPEGHTSRSMYAAFPMVSLADGAKSALGEYLPSLGVAIWTTTPWTIPANLAVAVNPDLD 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE+     G  A+ A+ +    NV       ++IVA DL+ +L  K+  +L +K T+
Sbjct: 264 YSVVEV-----GQVASNADTQ---WNV----SSKYLIVAKDLIDSLAEKFNVELTVKTTV 311

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DLE+  Y HP+  R+ P+VIGGDYITTESGTGLVHTAPGHGQEDY+T  KYGLPILS
Sbjct: 312 KGKDLEHSTYKHPLFERESPIVIGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPILS 371

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G FTEEAG+F+GL+VLGDGN AV+  +    +L+ EEPY+HKYPYDWRTKKPTIF
Sbjct: 372 PVDDGGNFTEEAGQFAGLNVLGDGNQAVLDAMLAAGALLKEEPYQHKYPYDWRTKKPTIF 431

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A+DAI QV+W+PPQ
Sbjct: 432 RATEQWFASVEGFRDRALDAIAQVRWIPPQ 461



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 163/339 (48%), Positives = 214/339 (63%), Gaps = 22/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           +E P YGADVLRLWVSSVDYT D  IG  VL+Q+ DI  K+R T R LLGNLHD+    +
Sbjct: 641 KEEPPYGADVLRLWVSSVDYTNDQRIGKNVLKQLGDIRGKIRNTARVLLGNLHDFDPEKD 700

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ YD LP +D+Y L ++  +   + E++ES+QFF+ FQ +Q F +VDLS+FY D+AKDR
Sbjct: 701 AVPYDKLPAVDKYMLHRMTEVFNEVTEAFESFQFFRFFQTVQNFCVVDLSSFYIDIAKDR 760

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY      F RRS QTVL   L ++ R IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 761 LYISTPEGFRRRSTQTVLYLALENLTRAIAPVLCHLAEDIWQFLPYK------TPYKSVF 814

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  LD KW+   +    FW K+ ELR +VNKVLE AR  K IGSSLEAKV L+  D+
Sbjct: 815 EAGWVNLDAKWQNPEIAT--FWEKLRELRNDVNKVLEQARVDKSIGSSLEAKVLLYIADS 872

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS--GEYLVEGKDKVW- 628
            L  +++ +    +  D L+ +FI SQVE+L S+    I  + Y+  GE         W 
Sbjct: 873 ELRQQVKTLEENSNGIDELRYLFITSQVELLDSSQK--IDGLKYNSVGEN--------WG 922

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           IGV  AEG+KC+RCWNYST VG   + P LC RC + L 
Sbjct: 923 IGVVDAEGAKCDRCWNYSTHVGESKDDPLLCERCVDALG 961


>gi|209523554|ref|ZP_03272108.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209495959|gb|EDZ96260.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 697

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/330 (65%), Positives = 257/330 (77%), Gaps = 17/330 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE Q    GDS +P   K             +++VA++LV  L A + T L +K T+
Sbjct: 264 YAVVETQ----GDSESPIEFK-------------YLLVAAELVERLSATFHTNLTVKATV 306

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 307 KGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILS 366

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI EEPY+HKYPYDWRTKKPTIF
Sbjct: 367 PVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIF 426

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 427 RATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 47/55 (85%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW 387
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDF 689


>gi|409994105|ref|ZP_11277225.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
 gi|291570477|dbj|BAI92749.1| isoleucyl-tRNA synthetase [Arthrospira platensis NIES-39]
 gi|409935018|gb|EKN76562.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
          Length = 964

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/330 (64%), Positives = 255/330 (77%), Gaps = 17/330 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW+NPYLTL PEYEAAQI VF QM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWDNPYLTLTPEYEAAQIAVFAQMVLKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+WTTTPWT+P N AV++N +L 
Sbjct: 204 EYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAIWTTTPWTIPGNLAVSLNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE Q    GDS +    K             +++VA++LV  L A + T L +K T+
Sbjct: 264 YSVVETQ----GDSESSIEFK-------------YLLVAAELVERLSATFETNLTVKATV 306

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LENC Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 307 KGELLENCTYKHPLFDRESRILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILS 366

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI EEPY+HKYPYDWRTKKPTIF
Sbjct: 367 PVDENGDFTEEAGEFAGLNVLKDANSAIIEALQEAGSLIKEEPYQHKYPYDWRTKKPTIF 426

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A++AI QV+W+PPQ
Sbjct: 427 RATEQWFASVEGFRSQALEAIKQVQWIPPQ 456



 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 158/342 (46%), Positives = 223/342 (65%), Gaps = 22/342 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQEPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+Y DLP +D+Y L ++  +   +++++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYQDLPELDRYMLHRMTEVFAEVKDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQN+P++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNMPYS------TPYLSVF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  LDE W+   + E  FW K+ E+R EVN+V+E AR  K++GSSL+AKV L+  D 
Sbjct: 809 ESGWVRLDETWKKPELAE--FWVKLREIRAEVNQVMEQARKDKMVGSSLDAKVRLYVADE 866

Query: 572 SLASRLREMC------TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
            L  +L  M          +  D L+ + I SQVE+L   P+ L  ++ Y  E      +
Sbjct: 867 KLRQQLAAMNPNPAEFKQNNGVDALRYLLICSQVELL-ENPDKLA-DLQYKSE-----SE 919

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + +GV +A+G KC+RCWNYS  +G   +HPT+C RC   LA
Sbjct: 920 FMAVGVVKADGEKCDRCWNYSVHIGESSDHPTICERCVSALA 961


>gi|427731408|ref|YP_007077645.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
 gi|427367327|gb|AFY50048.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
          Length = 1097

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/331 (64%), Positives = 250/331 (75%), Gaps = 16/331 (4%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMYLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F +     +   +L E+LPDLG+AVWTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAVWTTTPWTIPGNLAVAVNGDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y++VE+               SR G   + + K ++IVA++LV  L      +L +K T
Sbjct: 263 NYSLVEV---------------SRKGAETQSKFK-YLIVAAELVERLATTISAELTVKAT 306

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+  L+YGLPIL
Sbjct: 307 FKGQDLEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYIVGLRYGLPIL 366

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FTEEAG+F+GL+VLGDGN AV+  L +  SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 367 APVDDNGNFTEEAGQFAGLNVLGDGNQAVIDALTDAGSLLKEEAYAHKYPYDWRTKKPTI 426

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV GFR+ A+ AI  VKW+P Q
Sbjct: 427 FRATEQWFASVAGFREEALKAIASVKWIPAQ 457



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 122/258 (47%), Positives = 177/258 (68%), Gaps = 9/258 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDYT DV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 KKEPPYGADVLRLWVSSVDYTADVRLGSNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKD 695

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ +++LP +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVPFEELPQLDKYMLHRIREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 756 LYISAPNSFRRRSCQTVIHIALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 809

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W  L++KW    +GE  FW  +  LRT+VNKV+E AR  K+IGSSLEAKV L+  D 
Sbjct: 810 QAGWVKLEDKWHNPDLGE--FWETLRSLRTDVNKVMEQARIEKMIGSSLEAKVLLYVADE 867

Query: 572 SLASRLREMCTAKHDADT 589
            L  ++++M T  H  +T
Sbjct: 868 KLREQMQQMNTGSHVLNT 885



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 588  DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYST 647
            D L+ +F+ SQVE+L S+    + ++ Y+ +      D   IG+  A+G KC+RCWNYST
Sbjct: 1022 DELRYLFLSSQVELLDSSEK--LPDVKYNLQ-----SDNWGIGIVNADGEKCDRCWNYST 1074

Query: 648  QVGSFVEHPTLCSRCYEVLA 667
             VG   EHP +C RC   LA
Sbjct: 1075 TVGESQEHPLICDRCVSALA 1094


>gi|186681922|ref|YP_001865118.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|254782424|sp|B2IZP5.1|SYI_NOSP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|186464374|gb|ACC80175.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 959

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/331 (64%), Positives = 253/331 (76%), Gaps = 18/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKRYG+W DW+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 NFKRYGIWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIYA F + S   +   LL E+  DLG+A+WTTTPWT+P N AVAVNA L
Sbjct: 203 LEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAIWTTTPWTIPGNLAVAVNADL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+       S + A  K +           ++IVA+DLV  L +  G +L +K T
Sbjct: 263 NYAVVEV-------SQSEAQSKFK-----------YLIVAADLVERLSSTLGLELTLKAT 304

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+DLE+  Y HP+ +R+ P+V+GGDYITTESGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 305 FKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPIL 364

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+ EEPY HKYPYDWRTKKPTI
Sbjct: 365 APVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLLKEEPYPHKYPYDWRTKKPTI 424

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR+ A+ AI  VKW+P Q
Sbjct: 425 FRATEQWFASVEGFREEALKAIATVKWIPAQ 455



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 216/341 (63%), Gaps = 30/341 (8%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+GDV IG  +++QM+D+  K+R T R+LLG+L D+    +++ 
Sbjct: 637 PAYGADVLRLWVSSVDYSGDVRIGKNIIKQMNDVRGKIRNTARFLLGSLDDFDPEKDTVP 696

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           +++LP +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDRLY 
Sbjct: 697 FEELPELDRYMLHRITEVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYI 756

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
               +F RRSCQTVL   L ++ R IAP+L H AED+WQ LP+       +  + VFE+ 
Sbjct: 757 SAKDAFRRRSCQTVLKIALDNLARAIAPVLSHTAEDIWQYLPYK------TPYKSVFEAG 810

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W  ++EKWR   + E  FW ++ ++R +VNK LE+ R  K IGSSLEAKV +   D  L 
Sbjct: 811 WVQVEEKWRNPELAE--FWSELRKIRDKVNKTLEIYRLQKTIGSSLEAKVVVHVFDERLR 868

Query: 575 SRLREMCTAKHDA-------DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK- 626
            RL+ +    H +       D L+ +F+ SQVEV PS P               EG D  
Sbjct: 869 QRLQALNPNTHGSVEKSNGVDELRYLFLASQVEV-PSEP------------IFEEGDDAG 915

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           ++I V +A+G KC+RCWNYST VG   EHP +C RC   LA
Sbjct: 916 IYIQVYKADGEKCDRCWNYSTHVGESAEHPLICERCVAALA 956


>gi|17228568|ref|NP_485116.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81772618|sp|Q8YXY3.1|SYI_NOSS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|17130419|dbj|BAB73030.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 960

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/331 (64%), Positives = 250/331 (75%), Gaps = 16/331 (4%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 NFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F + S   +   LL E+LPDLG+A+WTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHTSRSIYAAFPVTSFAEAAKPLLGEYLPDLGVAIWTTTPWTIPGNLAVAVNGDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y++VE+               SR G   +   K ++IVA+DLV  L A    +L +K T
Sbjct: 263 NYSLVEV---------------SRIGAETQSNFK-YLIVAADLVERLAATISAQLTVKAT 306

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDYV  L+YGLPIL
Sbjct: 307 FKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYVVGLRYGLPIL 366

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT+EAG+F+GL+VLG+GN AV+  L    SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 367 APVDDNGDFTQEAGQFAGLNVLGEGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTI 426

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 427 FRATEQWFASVEGFRDEALKAIAAVKWIPAQ 457



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 219/337 (64%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADV+RLW SSVDYTGDV +G  +++Q++D+  K+R T R+LLG+L+D+    N
Sbjct: 636 KKEPPYGADVMRLWASSVDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLYDFDPEKN 695

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ ++++P +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVQFEEMPQLDKYMLHRIREVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 756 LYISAPDAFRRRSCQTVIHIALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 809

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  ++EKW    + E  FW ++ +LRT+VNKVLE AR  K+IGSSLEAK  ++  DA
Sbjct: 810 EAGWVQVEEKWHNPELAE--FWQQLRQLRTDVNKVLEQARVEKMIGSSLEAKALIYVKDA 867

Query: 572 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           +    +  +     +  D L+ +F+ SQVE+L S     +++  Y+ +      D   IG
Sbjct: 868 NSRKAIATLNPEVGNGVDELRYLFLTSQVELLDSADK--LQDGKYTSQ-----SDSWGIG 920

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V  AEG KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 921 VVNAEGQKCDRCWNYSTHVGESAEHPLLCERCVPALA 957


>gi|75909978|ref|YP_324274.1| isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75703703|gb|ABA23379.1| Isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 978

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/331 (64%), Positives = 249/331 (75%), Gaps = 16/331 (4%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKRYGVW DW++PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 161 NFKRYGVWGDWDHPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAE 220

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F +     +   +L E+LPDLG+A+WTTTPWT+P N AVAVN  L
Sbjct: 221 LEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAIWTTTPWTIPGNLAVAVNGDL 280

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+  +   D    +N K             ++IVA++LV  L A    +L +K T
Sbjct: 281 NYAVVEVAQI---DVETQSNFK-------------YLIVAAELVERLAATISAQLTVKAT 324

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDYV  L+YGLPIL
Sbjct: 325 FKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYVVGLRYGLPIL 384

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 385 APVDDNGDFTQEAGEFAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTI 444

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 445 FRATEQWFASVEGFRDEALKAIATVKWIPAQ 475



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 220/337 (65%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADV+RLW SSVDYTGDV +G  +++Q++D+  K+R T R+LLG+LHD+    N
Sbjct: 654 KKEPPYGADVMRLWASSVDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKN 713

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ ++++P +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 714 AVQFEEMPQLDRYMLHRIREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 773

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 774 LYISAPDAFRRRSCQTVIHIALQNLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 827

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +++KW    + E  FW ++ +LRT+VNKVLE AR  K+IGSSLEAK  ++  DA
Sbjct: 828 EAGWVQVEKKWHNPELAE--FWQQLRQLRTDVNKVLEQARVEKMIGSSLEAKALIYVKDA 885

Query: 572 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           +  + +  +     +  D L+ +F+ SQVE+L S     +++  Y+ +      D   IG
Sbjct: 886 NSRNAIATLNPEVGNGVDELRYLFLTSQVELLDSADK--LQDGKYTSQ-----SDNWGIG 938

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V  AEG KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 939 VVNAEGQKCDRCWNYSTHVGESQEHPLLCERCVPALA 975


>gi|354567853|ref|ZP_08987020.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
 gi|353541527|gb|EHC10994.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
          Length = 958

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/331 (64%), Positives = 248/331 (74%), Gaps = 18/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWEHPYLTLTPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F + S   +    L+EFLP+LG+A+WTTTPWT+P N AVA+N +L
Sbjct: 203 LEYPEGHTSRSIYAAFPVTSLAEAVKPALSEFLPNLGVAIWTTTPWTIPGNLAVALNPEL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+ S  EG                      ++IVA+DLV  L A   T L +K T
Sbjct: 263 NYAVVEVTSSGEGLGFK------------------YLIVAADLVERLSATLETPLSVKAT 304

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE+  Y HP+ +R+ P+VIGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 305 VKGKDLEHSTYRHPLYDRESPIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPIL 364

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT EAG+F+GL+VLGDGN AV+  L    SL+ EEPY HKYPYDWRTKKPTI
Sbjct: 365 APVDDNGNFTPEAGQFAGLNVLGDGNQAVIDALTIAGSLLKEEPYVHKYPYDWRTKKPTI 424

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 425 FRATEQWFASVEGFRAEALKAIASVRWIPAQ 455



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/339 (44%), Positives = 212/339 (62%), Gaps = 21/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDYT DV +G  +++Q+ DI  K+R T + LLGNLHD+    +
Sbjct: 634 KKEPAYGADVLRLWVSSVDYTSDVRLGSNIIKQLVDIRNKIRNTAKNLLGNLHDFDPAKD 693

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y+ LP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 694 AVPYEQLPQLDKYMLHRMTEVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYMDIAKDR 753

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTV    L ++ + IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 754 LYISTPNALRRRSCQTVYWYALENLAKAIAPVLCHLAEDIWQYLPYH------TPHKSVF 807

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L + W    +    FW ++ E+R +VNKVLE AR  K+IGSSLEAK+ L+  DA
Sbjct: 808 ESGWVQLQQNWHNPELAT--FWQQLREIRLDVNKVLEQARVEKMIGSSLEAKILLYISDA 865

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVW 628
            L S ++ +  +  +  D L+ +FI S VE++  P    G   N+           D+  
Sbjct: 866 ELLSAIKSLNASNSNGVDELRYLFITSLVELVDAPEKLQGSKYNLQ---------ADRWR 916

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           IGV +A+G KC+RCWNYST VG    HP +C RC   LA
Sbjct: 917 IGVLQADGQKCDRCWNYSTHVGENAAHPLICERCVAALA 955


>gi|427707880|ref|YP_007050257.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
 gi|427360385|gb|AFY43107.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
          Length = 960

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/331 (64%), Positives = 247/331 (74%), Gaps = 16/331 (4%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F+RYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 NFQRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F +     +   +L E+LP+LG+AVWTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHTSRSIYAAFPVTGLSEAAKSVLGEYLPELGVAVWTTTPWTIPGNLAVAVNGDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+      D+ A    K             ++IVA+DLV  L A    +L +K T
Sbjct: 263 NYAVVEVSRR---DAEAQRGFK-------------YLIVAADLVERLAATISAELTVKAT 306

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 307 FKGKELEHTTYRHPLYDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPIL 366

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FTEEAG+F+GL+VLGDGN AV+  L    SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 367 APVDDNGNFTEEAGQFAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKPTI 426

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 427 FRATEQWFASVEGFRDEALKAIASVKWIPAQ 457



 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 154/337 (45%), Positives = 217/337 (64%), Gaps = 23/337 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+GDV IG  +++Q++D+  K+R T R+LLG+LHD+    +++ 
Sbjct: 639 PAYGADVLRLWVSSVDYSGDVRIGKNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKDAVP 698

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           ++DLP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 699 FEDLPQLDKYMLHRIREVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYI 758

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
             + SF RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF++ 
Sbjct: 759 SASKSFRRRSCQTVIHVALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVFQAG 812

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W  +++KW    +GE  FW  + +LRT+VNKVLE AR  K+IGSSLEAK  +      L 
Sbjct: 813 WVQVEDKWDNPELGE--FWETLRQLRTDVNKVLEQARIEKMIGSSLEAKALIHLPHKQLG 870

Query: 575 SRLREMCTAKHDA-DTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVW-IG 630
             ++       +  D L+ + + SQVEVL  P    GL        +Y V+  D  W IG
Sbjct: 871 DAIKAFNPVSGNGIDELRYLLLTSQVEVLDSPEKLQGL--------KYTVQTVD--WQIG 920

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V+ A+G KC+RCWNYST VG   EHP LC RC   L+
Sbjct: 921 VANADGEKCDRCWNYSTHVGESAEHPLLCERCVSALS 957


>gi|428773540|ref|YP_007165328.1| isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
 gi|428687819|gb|AFZ47679.1| Isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
          Length = 972

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/330 (63%), Positives = 256/330 (77%), Gaps = 13/330 (3%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYG+W DW NPYLTL PEYEAAQIEVFG+M+L GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGIWGDWENPYLTLKPEYEAAQIEVFGKMALNGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA F +       S L  +++P+LG+A+WTTTPWT+P N AVAVN KL 
Sbjct: 204 EYPEGHTSRSIYASFTITKLSDKASHL-EQYMPNLGVAIWTTTPWTIPGNLAVAVNGKLD 262

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE+  + E D   P         ++K+ +  F+IVA DLV +L   +G KL +K T+
Sbjct: 263 YAVVEV--IAENDPPKPP--------LIKEGQ--FLIVAQDLVESLGNTFGAKLAVKTTV 310

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+DLE   Y HP+ +R+ PVVIGGDYITTESGTGLVHTAPGHGQEDY+T  KY LPILS
Sbjct: 311 KGADLELSTYKHPLFDRESPVVIGGDYITTESGTGLVHTAPGHGQEDYITGQKYHLPILS 370

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G FTEEAG+F+GL+VL D N A++  L ++ SL+ EE Y+HKYPYDWRTK+PTIF
Sbjct: 371 PVDNKGNFTEEAGEFAGLNVLKDANQAIIDALTDKGSLLKEEAYQHKYPYDWRTKQPTIF 430

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV+GFR+ A+ AI +V W+P Q
Sbjct: 431 RATEQWFASVDGFREEALKAIKEVNWIPAQ 460



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/341 (45%), Positives = 217/341 (63%), Gaps = 16/341 (4%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSS DY+ DV IG  +++Q++D+YRK+R T R+L+G+LHD+    N
Sbjct: 639 KQQPPYGADVLRLWVSSTDYSADVRIGDSIIKQLADVYRKIRNTARFLIGSLHDFDPAKN 698

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y DLP +D+Y L +   +   I E+YES+QFFK FQ +Q F +VDLSNFY DVAKDR
Sbjct: 699 AVNYADLPELDKYILHETHEVFTEITEAYESFQFFKFFQKVQNFCVVDLSNFYLDVAKDR 758

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV++  L ++ R IAP+L H+AED+WQNLP++           VF
Sbjct: 759 LYISDLDSARRRSCQTVMAIILENLARAIAPVLCHMAEDIWQNLPYS------KPCNSVF 812

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L+ +W   P   +  W ++  +RT VNK+L+ AR  KLIG+SLEAKV ++    
Sbjct: 813 EAGWVKLEPEWVQSPEF-VQKWQELRHIRTGVNKILDDARNQKLIGASLEAKVLVYDTTG 871

Query: 572 SLASRLREM-----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            LA  L  +         +  D L+ + ++SQVE++  T    +  I Y GE  +     
Sbjct: 872 KLADTLASLNPDDALNDGNRVDELRYLLLVSQVELV--TDESTLDGIDYQGEITLTDT-T 928

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + + V  AEG KC+RCWNYS  VG+FV+ P +C+RC E LA
Sbjct: 929 LKVAVVNAEGRKCDRCWNYSNSVGTFVDEPLICNRCKEALA 969


>gi|440683129|ref|YP_007157924.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
 gi|428680248|gb|AFZ59014.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
          Length = 960

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/383 (57%), Positives = 264/383 (68%), Gaps = 31/383 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGIWGDWENPYLTLKPEYEAAQIGVFGEMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIYA F +V         L+ FLPDLG+AVWTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHVSRSIYAAFPVVKVSEGLKASLDAFLPDLGVAVWTTTPWTIPGNLAVAVNGAL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE+      D+ A    K             ++IVA++LV  L A   ++L +K  
Sbjct: 263 EYAVVEVS---RRDAEAQRGCK-------------YLIVAAELVERLAAVLDSELTVKAK 306

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG DLE   Y HP+ +R+  VV+GGDYITTESGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 307 FAGKDLEGTTYRHPLFDRESLVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPIL 366

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT+EAGKF+GL+VLGDGN A++  L E  SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 367 APVDDSGNFTDEAGKFAGLNVLGDGNQAIIDALSEAGSLLKEEAYPHKYPYDWRTKKPTI 426

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ----------EAPGYGADVLRLWVSSV-- 350
           FRATEQWFASV GFR+ A+ AI  V+W+P Q          E   +     R W   +  
Sbjct: 427 FRATEQWFASVAGFREDALKAIASVRWIPAQGENRITPMIAERSDWCISRQRSWGVPIPV 486

Query: 351 ---DYTGDVMIGPQVLRQMSDIY 370
              D TG+V++  + +  +  I+
Sbjct: 487 FYDDATGEVLLNAETINHVQAIF 509



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/338 (44%), Positives = 213/338 (63%), Gaps = 19/338 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 KQQPAYGADVLRLWVSSVDYSGDVRLGNNIIKQLADVRNKIRNTARFLLGSLHDFDPQKD 695

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++++ DLP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVAFADLPDLDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T +F RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +A + VF
Sbjct: 756 LYISSTDAFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYK------TAYKSVF 809

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +D++W    + E  FW  +  LR +VNKVLE AR  KLIGSSLEAK  +     
Sbjct: 810 EAGWVQVDDEWENEDLAE--FWDTLRTLRNDVNKVLEQARIEKLIGSSLEAKALIHIPHK 867

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW-I 629
            L   ++       +  D L+ + + SQVE+L S     ++ + Y+         + W I
Sbjct: 868 QLNDAIKAFNPVSGNGIDELRYLLLTSQVEILDSAEG--LQGLKYT------ATTEDWTI 919

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +  A+G KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 920 AIVNADGQKCDRCWNYSTHVGESAEHPLLCERCVPALA 957


>gi|428311685|ref|YP_007122662.1| isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
 gi|428253297|gb|AFZ19256.1| Isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
          Length = 967

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/330 (63%), Positives = 245/330 (74%), Gaps = 21/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWEHPYLTLTPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+YA FRM         +L  FLPDLG+A+WTTTPWT+P N AVAVN +L 
Sbjct: 204 EYPEGHTSRSLYAAFRMTQPAAGVKEVLEPFLPDLGVAIWTTTPWTLPGNLAVAVNPELN 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV++ S                     +    ++IVA+DLV  L   +GT L +K T+
Sbjct: 264 YAVVQVGS---------------------ESPYKYLIVAADLVERLSETFGTPLTVKATM 302

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +RQ PVVIGGDY+TTESGTGLVHTAPGHGQEDY    +YGLPILS
Sbjct: 303 PGKALEHSTYQHPLFDRQSPVVIGGDYVTTESGTGLVHTAPGHGQEDYQVGQRYGLPILS 362

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT+EAGKF+GL+VL D N A+++ ++   SL+ EEPY HKYPYDWRTKKPTIF
Sbjct: 363 PVDDKGNFTQEAGKFAGLNVLKDANEAIIQAMEAAGSLLKEEPYLHKYPYDWRTKKPTIF 422

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 423 RATEQWFASVEGFRDEALKAIASVKWIPAQ 452



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/339 (44%), Positives = 216/339 (63%), Gaps = 20/339 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+ D+ +   +L+Q+ D+  K+R T R+LLGNLHD+    +++ 
Sbjct: 643 PPYGADVLRLWVSSVDYSADIPLSTTILKQLGDVRGKIRNTARFLLGNLHDFDPEKHTVP 702

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y++LP +D+Y L ++  + + + E++ SYQFF+ FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 703 YEELPELDRYMLHRMTEVFQEVTEAFNSYQFFRFFQTIQNFCVVDLSNFYLDIAKDRLYI 762

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
               S  RRSCQTV+   L ++ R IAP+L HLAED+WQ LP+       +  + VFE+ 
Sbjct: 763 SSPDSSRRRSCQTVMVVALENLARAIAPVLSHLAEDIWQYLPYK------TPYKSVFEAG 816

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W  L++KW+   +     W  +  +RTEVNKV+E AR  K+IG+SL+ KV L+  +  L 
Sbjct: 817 WVKLEDKWKKPELAAS--WTILRTIRTEVNKVMEQARAQKMIGASLDGKVLLYVSEPELR 874

Query: 575 SRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            +L  +      +    D L+ +F+ SQVE+L S P  + +      E+  E  DK+ +G
Sbjct: 875 KQLEALNPQDSLSGDRVDELRYLFLASQVELLDS-PEAIQK-----AEFKSES-DKLSVG 927

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           V +A+G KC+RCWNYST+VG+  EHP LC RC   L  Q
Sbjct: 928 VVKADGEKCDRCWNYSTRVGTLSEHPLLCERCVPALKGQ 966


>gi|414077208|ref|YP_006996526.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
 gi|413970624|gb|AFW94713.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
          Length = 972

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/331 (63%), Positives = 246/331 (74%), Gaps = 13/331 (3%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGIWGDWENPYLTLKPEYEAAQIGVFGEMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIYA F +V         L+ FLPDLG+AVWTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHVSRSIYAAFPVVKVAEGLKASLDGFLPDLGVAVWTTTPWTIPGNLAVAVNGAL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE+    +    A A ++ R           ++IVA++LV  L      +L +K  
Sbjct: 263 EYAVVEVSR--KDAQGAKAQRECR-----------YLIVAAELVERLGEVLDCELTVKAK 309

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG DLE   Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 310 FAGKDLEGTTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPIL 369

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G FT+EAGKFSGL+VLG+GN A++  L E   L+ EE Y HKYPYDWRTKKPTI
Sbjct: 370 APVDDSGNFTDEAGKFSGLNVLGEGNQAIIDALSEAGYLLKEEAYPHKYPYDWRTKKPTI 429

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV GFR  A+ AI  V+W+P Q
Sbjct: 430 FRATEQWFASVAGFRDEALKAISSVRWIPAQ 460



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 151/346 (43%), Positives = 216/346 (62%), Gaps = 26/346 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 639 KQQPAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADVRNKIRNTARFLLGSLHDFDPQKD 698

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +++DDLP +D+Y L ++  +   + ++++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 699 VVAFDDLPDLDKYMLHRIREVFNEVTDAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 758

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTVL   L ++   IAP+L H AED+WQ +P+       +  + VF
Sbjct: 759 LYISSADAFRRRSCQTVLQIALENLAIAIAPVLCHTAEDIWQFIPYE------TQYKSVF 812

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W  +D+KW    + E  FW  +  +R +VNKVLE ART KLIGSSLEA   ++  D 
Sbjct: 813 QAGWVQVDDKWDNPELAE--FWKTLRRIRGDVNKVLEQARTEKLIGSSLEAIALIYLSDE 870

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            L + +  +  + +  D L+ +F+ S+V++L  P T  GL           V+G+D   I
Sbjct: 871 KLRTAIEPLNVSGNGIDELRYLFLTSEVQLLDTPETLKGL-------KTLRVQGEDNWDI 923

Query: 630 GVSRA-----EGS---KCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           GV  A     EG    KC+RCWNYS  VG   EHP LC RC   LA
Sbjct: 924 GVVNAADYEHEGKSYHKCDRCWNYSPHVGESAEHPLLCERCIPALA 969


>gi|427716716|ref|YP_007064710.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
 gi|427349152|gb|AFY31876.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
          Length = 976

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/334 (63%), Positives = 250/334 (74%), Gaps = 6/334 (1%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F +     +    L+E+LPDLG+A+WTTTPWT+P N AVAVN +L
Sbjct: 203 LEYPEGHTSRSIYAAFPVTGLSEALKPTLSEYLPDLGVAIWTTTPWTIPGNLAVAVNGEL 262

Query: 123 QYAVVEIQSLLEGDSAA---PANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
            YA+VE+ S   G   A   P  +  R     +  K  ++IVA++LV  L      +L +
Sbjct: 263 NYAIVEV-SRRGGHLRAGVPPVEQSVRHAEARRGFK--YLIVAAELVERLSTTLDVELTV 319

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           K T  G DLE+  Y H + +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+   +YGL
Sbjct: 320 KTTFQGQDLEHTTYRHSLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGL 379

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PIL+PVDD G FT EAG+F+GL+VLGDGN AV+  L    SL+ EE Y HKYPYDWRTKK
Sbjct: 380 PILAPVDDNGNFTAEAGEFAGLNVLGDGNQAVIDALMAAGSLLKEEAYAHKYPYDWRTKK 439

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           PTIFRATEQWFASV GFR+AA+ AI  VKW+P Q
Sbjct: 440 PTIFRATEQWFASVAGFREAALKAIATVKWIPAQ 473



 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 150/337 (44%), Positives = 214/337 (63%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +++Q++D+  K+R T R+LLG+L+D+    +
Sbjct: 652 KQEPAYGADVLRLWVSSVDYSSDVRIGKNIIKQLNDVRGKIRNTARFLLGSLNDFDPEKD 711

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            + ++DLP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 712 KVPFEDLPQLDKYMLHRIFEVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 771

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTVL   L ++ + IAP+L H AED+WQ LP+       +  + VF
Sbjct: 772 LYISAPDAFRRRSCQTVLQIALENLAKAIAPVLSHTAEDIWQYLPYK------TPYKSVF 825

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  ++  W    +GE  FW  + +LRT+VNKVLE AR  KLIGSSLEAK  +     
Sbjct: 826 ESGWVQIESAWLNPDLGE--FWETLRQLRTDVNKVLEQARIEKLIGSSLEAKALIHIPHQ 883

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            L   ++     K +  D L+ + + SQVE+L ST    ++ + Y+ +      +   IG
Sbjct: 884 QLGDAIKAFNPVKGNGIDELRYLLLTSQVEILDSTEK--LQGLKYTAQ-----TEDWTIG 936

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +  A+G KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 937 IVNADGEKCDRCWNYSTHVGESAEHPLLCERCIPALA 973


>gi|434403042|ref|YP_007145927.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
 gi|428257297|gb|AFZ23247.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
          Length = 996

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 254/353 (71%), Gaps = 24/353 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFK+YGVW DWNNPYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKQYGVWGDWNNPYLTLKPEYEAAQIGVFGEMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIYA F +     +    L  +LPDL +A+WTTTPWT+P N AVAVNA L
Sbjct: 203 LEYPEGHVSRSIYAAFPVTGVSEALKSSLAAYLPDLAVAIWTTTPWTIPGNLAVAVNADL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV----------------------FII 160
            Y+VVE++      + +P  ++     V+    +                       ++I
Sbjct: 263 HYSVVEVEP--HPPTPSPQARRGSEEEVVSSTPQAGSEEFTSPSLLAERGTEGVRFRYLI 320

Query: 161 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 220
           VA++LV  L A    +L ++ T +G DLE   Y HP+ +R+ PVV+GGDYITT+SGTGLV
Sbjct: 321 VAAELVERLAAFLDVELTVRATFSGKDLEGTTYRHPLFDRESPVVVGGDYITTDSGTGLV 380

Query: 221 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 280
           HTAPGHGQEDY+   +YGLPIL+PVDD G FT EAGKF GL+VLGDGN AV+  L E  S
Sbjct: 381 HTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTAEAGKFVGLNVLGDGNQAVIDALTEAGS 440

Query: 281 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           L+ EE Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA++AI  V+W+P Q
Sbjct: 441 LLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFREAALNAIASVRWIPAQ 493



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 218/337 (64%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV +G  +++Q++D+  K+R T R+LLG+L D+    +
Sbjct: 672 KQQPAYGADVLRLWVSSVDYSSDVRLGSNIIKQLADVRNKIRNTARFLLGSLDDFNPETD 731

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ ++ LP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 732 AVPFEKLPELDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 791

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T +F RRSCQTVL   L ++V+ IAP+L H AED+WQ +P+       +  + VF
Sbjct: 792 LYISSTDAFRRRSCQTVLQIALENLVKAIAPVLCHTAEDIWQFIPYK------TPYKSVF 845

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L +KW+   + +   W ++ +LRTEVNKVLE AR  KLIGSSLEAK  L+  D 
Sbjct: 846 EAGWVQLADKWQNPELAK--SWEQLRQLRTEVNKVLEQARLEKLIGSSLEAKTLLYVADE 903

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            L + +  +  A  +  D  + +F+ SQVEVL S P  L + + YS +      D   IG
Sbjct: 904 QLRATVESLNPASGNGIDEPRYLFLTSQVEVLAS-PEAL-QGLKYSLQ-----SDSWGIG 956

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +  AEG KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 957 IVNAEGQKCDRCWNYSTHVGESAEHPLLCERCIPALA 993


>gi|428226290|ref|YP_007110387.1| isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
 gi|427986191|gb|AFY67335.1| Isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
          Length = 959

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/331 (62%), Positives = 247/331 (74%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW++PYLTL PEYEAAQ+ VFGQM L+G+IYRG+KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWDHPYLTLSPEYEAAQLGVFGQMVLKGHIYRGRKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS++A F M    P+    L E+LP+LG+A+WTTTPWT+PAN AV+VN  L
Sbjct: 203 LEYPEGHTSRSLFAAFPMTGLAPAVQEDLGEYLPELGVAIWTTTPWTIPANLAVSVNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE                      L    + ++IVA+DLV  L   +G  L +K  
Sbjct: 263 KYAVVEAD--------------------LPQVNRKYLIVAADLVERLSETFGKALTVKAV 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE+  Y HP+ +R+ PVVIGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPI 
Sbjct: 303 VPGKALEHSTYRHPLFDRESPVVIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLPIF 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD G FTEEAG F+G +VLG+GN AVV+ L    SL+ EEPY HKYPYDWRTKKPTI
Sbjct: 363 SPVDDNGHFTEEAGPFAGQNVLGEGNGAVVEALKAAGSLLKEEPYVHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV+GFR+ A+ AI QVKW+P Q
Sbjct: 423 FRATEQWFASVDGFREDALKAIAQVKWIPAQ 453



 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 227/340 (66%), Gaps = 20/340 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           +E P YGADVLRLWVSSVDY+ DV +G  +L+Q++D+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KEDPPYGADVLRLWVSSVDYSSDVPLGKNILKQLADVYRKIRNTARFLLGNLHDFEPAQH 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ YD+LP +D+Y L ++  +   +++++E++QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVPYDELPELDRYMLHRMTEVFAEVKDAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTVL+  +  + R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 752 LYISAPDAFRRRSCQTVLAQAIECLARAIAPVLCHMAEDIWQSLPYT------TPYKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W  LD++W+   + +   W ++  +RTEVNKV+E AR  K+IGSSLEAKV L+  D 
Sbjct: 806 QAGWVHLDDRWQQPEIAQ--RWQELRRIRTEVNKVMETARAEKMIGSSLEAKVLLYVADE 863

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           SL   L  +      A +  D L+ +F+ SQVE+L  TP G +  + Y  +      D +
Sbjct: 864 SLRQTLTALNPASSLAANGVDELRYLFLASQVELL-ETP-GPLAELKYQSQ-----SDAL 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +GV  A+G KC+RCWNYSTQVG   E PT+C RC E LA
Sbjct: 917 GVGVVNADGEKCDRCWNYSTQVGVSSEDPTICDRCVEALA 956


>gi|218441945|ref|YP_002380274.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|254782386|sp|B7KFT1.1|SYI_CYAP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218174673|gb|ACK73406.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 959

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/331 (62%), Positives = 252/331 (76%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+R+GVW DW +PYLTL P+YEAAQI VFGQM+L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFQRFGVWGDWEHPYLTLTPDYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YAVF +  A  +   +L  +L DLG+A+WTTTPWT+P N AVA+N  L
Sbjct: 203 LEYPEGHTSRSVYAVFPITKASDTAKKVLTPYLKDLGVAIWTTTPWTLPGNLAVALNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE        S  P         V K Q   + IVA+DLV  L A + T L +K T
Sbjct: 263 TYAVVE--------SGKP---------VCKHQ---YFIVAADLVDKLSATFETPLTVKAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G DLE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLP+L
Sbjct: 303 LKGEDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPVL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+ EEPY+HKYPYDWRTKKPTI
Sbjct: 363 SPVDEKGNFTSEAGQFAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A++AI  V W+PPQ
Sbjct: 423 FRATEQWFASVEGFRDTALEAIKNVTWIPPQ 453



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/339 (43%), Positives = 214/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ D+  K+R T R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADVLRLWVSSVDYSSDVPIGQNILKQLVDVRNKIRNTARFLLGNLHDFDPEKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP +D+Y L ++  +   + E++E++QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 692 TVAYEDLPELDRYMLHRITEVFTEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL   L ++ + IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 752 LYISDPNNLRRRSCQTVLKVALENLAKSIAPVLCHLAEDIWQFLPYK------TPYKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L+ +W+   +     W K  ++R EVNKV+E+AR  K+IGSSL+AKV L+  D 
Sbjct: 806 EAGWVELESEWKRPELTPK--WSKFRQIRDEVNKVMELARKDKMIGSSLDAKVLLYVSDK 863

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L   L         + +  D L+ +F+ SQV+++ S     I    Y  E    G    
Sbjct: 864 ELREHLDSFNPSDSLSNNRVDELRYLFLASQVDLVDSPKT--IGKANYKSESETLG---- 917

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + +A+G KC+RCWNYST VG FV+ PTLC RC   L
Sbjct: 918 -VAIVKADGEKCDRCWNYSTHVGEFVDDPTLCERCNAAL 955


>gi|218247493|ref|YP_002372864.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|254782387|sp|B7K5H5.1|SYI_CYAP8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218167971|gb|ACK66708.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 959

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/330 (63%), Positives = 249/330 (75%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFGQM+L+GYIYRG KPVHWSPSSRTALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLTPEYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSRTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S+SI+A F ++ +      +L+ FL +LG+A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE  S                 N+   Q   +IIVA+DLV  L A + T+L +K TL
Sbjct: 264 YAIVEQTS-----------------NLCNYQ---YIIVAADLVERLSATFSTELTVKATL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +R+  +VIGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL +LS
Sbjct: 304 PGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLQVLS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G FTEEAG+FSGL+VL D N A++  L  + SL+ EEPY HKYPYDWRTKKPTIF
Sbjct: 364 PVDDAGNFTEEAGQFSGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+AA++AI  V W+PPQ
Sbjct: 424 RATEQWFASVEGFREAALEAIKSVNWIPPQ 453



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SYD LP +DQY L ++  +   + +++E +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYDQLPELDQYMLHRITEVFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T S  RRSCQTVL   + S+ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLKVAVESLAKAIAPVLCHMAEDIWQFLPYK------TPYQSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W  + ++W    +     WGK+ ++RTEVNKVLE AR  K IGSSL+AKV L+  D 
Sbjct: 806 ASGWVEMQKQWERPEL--TASWGKLRQIRTEVNKVLEQARNEKAIGSSLDAKVLLYVSDQ 863

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
               +L           +  D L+ + + SQVE++ S     I+   Y  E      + V
Sbjct: 864 DFKKQLESFNPNDSLKGNQVDELRYLVLASQVELVDSLE--AIKKADYQSE-----SELV 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 917 SVGVVKAEGQKCDRCWNYSTKVGEFSDDPTICERCNAAL 955


>gi|302803323|ref|XP_002983415.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
 gi|300149100|gb|EFJ15757.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
          Length = 1155

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/352 (61%), Positives = 251/352 (71%), Gaps = 22/352 (6%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           +SF+RYGVW  WN+PYLTL P YEAAQI VF QM L GYIYRG+KPVHWSPSS TALAEA
Sbjct: 285 SSFQRYGVWGSWNSPYLTLQPAYEAAQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEA 344

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGH SRS+YAVF+M          L   L  LG+A+WTTTPWTVP N  VAVN K
Sbjct: 345 ELEYPEGHTSRSMYAVFKMTFTSDKFPKELEYLLSSLGVAIWTTTPWTVPGNTGVAVNEK 404

Query: 122 LQYAVVEIQSLLEGDSAAPANKKS-----RPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 176
           L Y+VVE+  +L  D ++   KKS     + GN L       +IVA+DLV +LE KW  +
Sbjct: 405 LTYSVVEV--VLNNDDSSLGGKKSTKAGRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQ 462

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           LV+K +  GS LE CRY HP++NR+  +VIGGDYITT+SGTGLVHTAPGHGQED+VT  K
Sbjct: 463 LVVKGSCTGSALEFCRYKHPLENREGVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQK 522

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE-------- 288
           YGLP+LSPVDD G FT+EA +F+G+ VL DGN AV+K LD   SL+MEE Y         
Sbjct: 523 YGLPMLSPVDDNGNFTDEANEFAGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFP 582

Query: 289 -------HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
                  HKYPYDWRTKKPTIFRATEQWFASVEGF   A+ AI  V W+P Q
Sbjct: 583 RIDSRIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIPSQ 634



 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/348 (56%), Positives = 248/348 (71%), Gaps = 9/348 (2%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +E P YGADVLRLWV+SVDYTGDV IGPQ+L+Q +D+YRKLRGTLRYLL NLHDW+    
Sbjct: 810  KEQPAYGADVLRLWVASVDYTGDVAIGPQILKQTADVYRKLRGTLRYLLSNLHDWKPELE 869

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            I YDDLP ID+Y LFQL +++ ++++S + YQF K FQ +QR+ ++DLSNFY D++KDRL
Sbjct: 870  IEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQRYAVLDLSNFYLDISKDRL 929

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GGT SFTRRSCQTVL++ LL + R I+P++PHLAED WQ+LPF+Y L DGS AE VFE
Sbjct: 930  YVGGTDSFTRRSCQTVLASLLLYLARGISPVVPHLAEDAWQHLPFSYILPDGSKAESVFE 989

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF---TD 569
            + WP +D +WRT    +   W  +LELR EVNKVLE AR GKLIG++L+AKV L     D
Sbjct: 990  AGWPEVDPRWRTISDRDKKLWSLLLELRVEVNKVLESARMGKLIGANLDAKVCLHLGGED 1049

Query: 570  DASLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-DKV 627
            DA L S L+ M  ++    D L  IF+ SQVEV+         +  Y+G   +EG   + 
Sbjct: 1050 DALLHSTLQAMAGSEDGTVDKLHVIFLTSQVEVVDCEDA----DCAYTGSCKLEGSGGRA 1105

Query: 628  WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            WIGV RAEG KCERCW YS  VGSF  H TLC RCY+++     P +A
Sbjct: 1106 WIGVKRAEGQKCERCWKYSPAVGSFTLHSTLCERCYKIVEALQSPVLA 1153


>gi|302754402|ref|XP_002960625.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
 gi|300171564|gb|EFJ38164.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
          Length = 1707

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/352 (61%), Positives = 251/352 (71%), Gaps = 22/352 (6%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           +SF+RYGVW  WN+PYLTL P YEAAQI VF QM L GYIYRG+KPVHWSPSS TALAEA
Sbjct: 284 SSFQRYGVWGSWNSPYLTLQPAYEAAQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEA 343

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGH SRS+YAVF+M  A       L   L  LG+A+WTTTPWT+P N  VAVN K
Sbjct: 344 ELEYPEGHTSRSMYAVFKMTFASDKFPKELEYLLSSLGVAIWTTTPWTIPGNTGVAVNDK 403

Query: 122 LQYAVVEIQSLLEGDSAAPANKKS-----RPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 176
           L Y+VVE+  +   D ++   KKS     + GN L       +IVA+DLV +LE KW  +
Sbjct: 404 LMYSVVEV--VFNNDDSSLGGKKSTKAGRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQ 461

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           LV+K +  GS LE CRY HP++NR+  +VIGGDYITT+SGTGLVHTAPGHGQED+VT  K
Sbjct: 462 LVVKGSCTGSALEFCRYKHPLENREGVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQK 521

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE-------- 288
           YGLP+LSPVDD G FT+EA +F+G+ VL DGN AV+K LD   SL+MEE Y         
Sbjct: 522 YGLPMLSPVDDNGNFTDEANEFAGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFP 581

Query: 289 -------HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
                  HKYPYDWRTKKPTIFRATEQWFASVEGF   A+ AI  V W+P Q
Sbjct: 582 RIDSRIVHKYPYDWRTKKPTIFRATEQWFASVEGFMPLALAAIKNVDWIPSQ 633



 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/338 (57%), Positives = 243/338 (71%), Gaps = 9/338 (2%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            +E P YGADVLRLWV+SVDYTGDV IGPQ+L+Q +D+YRKLRGTLRYLL NLHDW+    
Sbjct: 809  KEQPAYGADVLRLWVASVDYTGDVAIGPQILKQTADVYRKLRGTLRYLLSNLHDWKPELE 868

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            I YDDLP ID+Y LFQL +++ ++++S + YQF K FQ +QR+ ++DLSNFY D++KDRL
Sbjct: 869  IEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQRYAVLDLSNFYLDISKDRL 928

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y GGT SFTRRSCQ VL++ LL + R I+P++PHLAED WQ+LPF+Y L DGS AE VFE
Sbjct: 929  YVGGTDSFTRRSCQAVLASLLLYLARGISPVVPHLAEDAWQHLPFSYILPDGSKAESVFE 988

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF---TD 569
            + WP +D +WRT    +   W  +LELR EVNKVLE AR GKLIG++L+AKV L     D
Sbjct: 989  AGWPEVDPRWRTISDRDKKLWSLLLELRVEVNKVLESARMGKLIGANLDAKVCLHLGGED 1048

Query: 570  DASLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-DKV 627
            DA L S L+ M  ++    D L  IF+ SQVEV+         +  Y+G   +EG   + 
Sbjct: 1049 DALLHSTLQAMAGSEDGTVDKLHVIFLTSQVEVVDCEDA----DCAYTGSCKLEGSGGRA 1104

Query: 628  WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
            WIGV RAEG KCERCW YS  VGSF  H TLC RCY++
Sbjct: 1105 WIGVKRAEGQKCERCWKYSPAVGSFTLHSTLCERCYKI 1142


>gi|282901331|ref|ZP_06309257.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193826|gb|EFA68797.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 963

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/333 (60%), Positives = 252/333 (75%), Gaps = 17/333 (5%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           + SFKRYG+W+DW++PYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAE
Sbjct: 141 LNSFKRYGIWSDWDHPYLTLQPEYEAAQIGVFGRMYLKGYIYRGLKPVHWSPSSKTALAE 200

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGHVSRSIY VF ++        +L  F+PDL LAVWTTTPWT+P N A+AVN 
Sbjct: 201 AELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFMPDLALAVWTTTPWTIPGNLAIAVNG 260

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L YAVVE+   L  +++   +K              ++IVA+DLVP L       L ++
Sbjct: 261 SLNYAVVEV---LPNETSLFHHK--------------YLIVATDLVPRLTTILNVDLRVQ 303

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            + AG DLE+  Y HP+ +R+ PV+IGGDYITT+SGTGLVHTAPGHGQEDY+   +YGLP
Sbjct: 304 VSFAGEDLEHTIYRHPLFDRESPVLIGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLP 363

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           IL+PVD+ G FT++AGKF+GL+VLG+GN A++  L +  SL+ EE Y+HKYPYDWRT KP
Sbjct: 364 ILAPVDENGNFTQDAGKFAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKP 423

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 424 TIFRATEQWFASVHGFREDALKAIASVRWIPPQ 456



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 211/341 (61%), Gaps = 21/341 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++DI  K+R T R+LLG+LHD+    N
Sbjct: 635 KKDPAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKN 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++S + LP +D+Y L ++  +   +  ++E++QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AVSLEKLPELDRYMLHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQT+L   L ++VR IAP+L H AED+WQ +P++       + + VF
Sbjct: 755 LYISAADSFRRRSCQTILHIALENLVRAIAPVLCHTAEDIWQFIPYS------RSEKSVF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK--VYLFTD 569
           ++ W  +D +W+   +     W  +  LRT+VNKVLE  R  K IGSSLEAK  V+L   
Sbjct: 809 QAGWVKVDPQWKNPELENK--WHTLRMLRTDVNKVLEQVRMEKRIGSSLEAKILVHLTNS 866

Query: 570 DASLASRLREMC---TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            + L+  +++        +  D L+ + I+SQVE+    P  L +    S        + 
Sbjct: 867 HSPLSQTIKDFHFNPDRDNGVDELRYLLIVSQVEI----PEDLTQ---LSQLQYTTTTEN 919

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             IGV  AEG KC+RCWNYST +G   +HP LC RC   LA
Sbjct: 920 WTIGVVNAEGEKCDRCWNYSTHLGESSDHPLLCERCVLSLA 960


>gi|434396655|ref|YP_007130659.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
 gi|428267752|gb|AFZ33693.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
          Length = 958

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/330 (63%), Positives = 248/330 (75%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYG+W DW +PYLT+ P+YEAAQI VFGQM+L+GYIYRG KPVHWSPSS TALAEAEL
Sbjct: 144 FKRYGIWGDWEHPYLTMTPDYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSHTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+YA F ++S       L  ++LP+L +A+WTTTPWT+P N AVAVN  L+
Sbjct: 204 EYPEGHTSRSVYAAFPVISLGEDAKEL-EQYLPNLSVAIWTTTPWTIPGNLAVAVNGDLE 262

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV++ ++ E                L  Q   ++IVA DLV  L A  GT L +K TL
Sbjct: 263 YAVVDVGTIHE----------------LSLQ---YLIVAKDLVEKLSATLGTNLTVKTTL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE   Y HP+ NR+  VVIGGDYITTESGTGLVHTAPGHGQEDY+   KYGLPILS
Sbjct: 304 LGKALEGITYRHPLFNRESKVVIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FTEEAGKF+GL+VL  GN A+++ L +  SL+ EEPY+HKYPYDWRTKKPTIF
Sbjct: 364 PVDDKGYFTEEAGKFAGLNVLNGGNEAIIEALKDAGSLLKEEPYQHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+ A+ AI  V+W+P Q
Sbjct: 424 RATEQWFASVEGFREEALKAISSVQWIPAQ 453



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 223/339 (65%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 631 KQEPPYGADVLRLWVSSVDYSSDVPIGQNILKQLGDIYRKIRNTARFLLGNLHDFNPETD 690

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 691 AVAYADLPELDKYMLHRMTEVFADVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 750

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTVL+  + S+ + IAP+L H+AED+WQ++P+       ++   VF
Sbjct: 751 LYISDPNSFRRRSCQTVLAIAVESLAKAIAPVLSHMAEDIWQSIPYE------TSYRSVF 804

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W  + ++W+   + +  FW KI +LR EVNKV+E ART K IGSSL+AKV L+  D+
Sbjct: 805 QAGWVEMKDEWKKPELNQ--FWTKIRQLRDEVNKVMEQARTAKAIGSSLDAKVLLYVADS 862

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L   L         + +  D L+  F+ SQV ++ S+    I    Y+ +      D++
Sbjct: 863 DLKQHLEAFNPTDSFSGNGIDQLRYFFLASQVALVDSSET--IDKAEYNSK-----SDRL 915

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I + +A+G KC+RCWNYST VGSF + PT+C RC   L
Sbjct: 916 GIAIVKADGEKCDRCWNYSTTVGSFKDDPTICDRCNAAL 954


>gi|428305737|ref|YP_007142562.1| isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
 gi|428247272|gb|AFZ13052.1| Isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
          Length = 955

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/330 (61%), Positives = 246/330 (74%), Gaps = 22/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW+NPYLTL P YEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 145 FKRYGVWGDWDNPYLTLKPSYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAEL 204

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH+SRS+Y  F +     + +  L +FLP+L +A+WTTTPWT+PAN AV+VN +L+
Sbjct: 205 EYPEGHISRSLYVAFPVTKLGDAVNESLQQFLPNLSVAIWTTTPWTIPANLAVSVNPELK 264

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV ++                       ++  ++IVA+DLV TL    G    +K T+
Sbjct: 265 YAVVAVEG----------------------EQSNYLIVAADLVETLSETLGKNFQVKATV 302

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DLEN  Y HP+ +R+ PVVIGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 303 VGKDLENTTYRHPLFDRESPVVIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLPILS 362

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +G FTEEAG+F+GL+VLG+GN AV+  L E  +L+ EE Y HKYPYDWRTKKPTI+
Sbjct: 363 PVDADGNFTEEAGQFAGLNVLGEGNTAVITALTEVGALLKEEAYSHKYPYDWRTKKPTIY 422

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 423 RATEQWFASVEGFRDEALSAIASVKWIPSQ 452



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 225/337 (66%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           +E P YGADVLRLWVSSVDY+ DV I   +L+QM D+  K+R T RYLLG+LHD+    +
Sbjct: 631 KEEPPYGADVLRLWVSSVDYSSDVSISKSILKQMGDVRGKIRNTARYLLGSLHDFDPAKD 690

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y+ LP +D+Y L ++  + K++ E+++SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 691 AVPYEQLPELDRYLLHRMTEVFKDVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 750

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV++  L ++ + IAP+L H+AED+WQ +P+A      +  + VF
Sbjct: 751 LYISAENSLRRRSCQTVMAIALENLAKAIAPVLSHMAEDIWQYIPYA------TPCKSVF 804

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L+E+W    + +   W  + ++RT+VNKVLE AR  K+IGSSLE+KV L+  + 
Sbjct: 805 EAGWVNLEEEWHKPELTQP--WQMLRQVRTDVNKVLEQARAEKMIGSSLESKVLLYIPNV 862

Query: 572 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
                L+++   A +  D L+ +F+ SQVE+L S     ++++    +Y ++G D + +G
Sbjct: 863 DQRQLLQQLNPEAGNGVDELRYLFLSSQVELLDSVE--ALQDM----QYKMQG-DNLSVG 915

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + +A+G KC+RCWNYSTQVG   EHP +C RC   L+
Sbjct: 916 IVKADGEKCDRCWNYSTQVGKIAEHPVICERCVAALS 952


>gi|257061171|ref|YP_003139059.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256591337|gb|ACV02224.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 959

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/330 (62%), Positives = 249/330 (75%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFGQM+L+GYIYRG KPVHWSPSSRTALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLTPEYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSRTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S+SI+A F ++ +      +L+ FL +LG+A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE  S                 N+   Q   +IIVA+DLV  L A + T+L +K TL
Sbjct: 264 YAIVEQTS-----------------NLCNYQ---YIIVAADLVERLSATFSTELTVKATL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +R+  +VIGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL +LS
Sbjct: 304 PGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLQVLS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G FTEEAG+F+GL+VL D N A++  L  + SL+ EEPY HKYPYDWRTKKPTIF
Sbjct: 364 PVDDAGNFTEEAGQFAGLNVLKDANQAIINELKNKGSLLKEEPYLHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR+AA++AI  V W+PPQ
Sbjct: 424 RATEQWFASVEGFREAALEAIKAVTWIPPQ 453



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNLHD+    N
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKN 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY+ LP +DQY L ++  +   + +++E +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYEQLPELDQYMLHRITEVFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T S  RRSCQTVL   + S+ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLKVAVESLAKAIAPVLCHMAEDIWQFLPYK------TPYQSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W  + ++W    +     WGK+ ++RTEVNKVLE AR  K IGSSL+AKV L+  D 
Sbjct: 806 ASGWVEMQKQWERPEL--TASWGKLRQIRTEVNKVLEQARNEKAIGSSLDAKVLLYVSDQ 863

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
               +L           +  D L+ + + SQVE++ S     I+   Y  E      + V
Sbjct: 864 DFKKQLESFNPNDSLKGNQVDELRYLVLASQVELVDSLE--AIKKADYQSE-----SELV 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 917 SVGVVKAEGQKCDRCWNYSTKVGEFSDDPTICERCNAAL 955


>gi|282897045|ref|ZP_06305047.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197697|gb|EFA72591.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 965

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/333 (60%), Positives = 252/333 (75%), Gaps = 17/333 (5%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           ++SFKRYG+W+DW +PYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAE
Sbjct: 141 LSSFKRYGIWSDWEHPYLTLQPEYEAAQIGVFGRMYLKGYIYRGLKPVHWSPSSKTALAE 200

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGHVSRSIY VF ++        +L  F+PDL LAVWTTTPWT+P N A+AVN 
Sbjct: 201 AELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFMPDLALAVWTTTPWTIPGNLAIAVNG 260

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L YAVVE+   L  +++   +K              ++IV++DLVP L       L ++
Sbjct: 261 SLNYAVVEV---LPNENSLFHHK--------------YLIVSTDLVPRLTTILNVDLRVQ 303

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            + +G DLE+  Y HP+ +R+ PV+IGGDYITT+SGTGLVHTAPGHGQEDY+   +YGLP
Sbjct: 304 ASFSGEDLEHTIYRHPLFDRESPVLIGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLP 363

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           IL+PVD+ G FT++AGKF+GL+VLG+GN A++  L +  SL+ EE Y+HKYPYDWRT KP
Sbjct: 364 ILAPVDENGNFTQDAGKFAGLNVLGEGNQAIIDALAQAGSLLKEEAYQHKYPYDWRTNKP 423

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 424 TIFRATEQWFASVHGFREDALKAIASVRWIPPQ 456



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/344 (42%), Positives = 213/344 (61%), Gaps = 25/344 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++DI  K+R T R+LLG+LHD+    N
Sbjct: 635 KKDPAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKN 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++S + LP +D+Y L ++  +   +  ++E++QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AVSLEKLPDLDRYMLHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQT+L   L ++VR IAP+L H AED+WQ +P++       + + VF
Sbjct: 755 LYISAADSFRRRSCQTILHIALENLVRAIAPVLCHTAEDIWQFIPYS------RSEKSVF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK--VYLFTD 569
           ++ W  +D +W+   +     W  +  LRT+VNKVLE  R  K IGSSLEAK  VY+   
Sbjct: 809 QAGWVKIDPQWKNPELENK--WHTLRMLRTDVNKVLEQVRMEKKIGSSLEAKILVYIANS 866

Query: 570 DASLASRLREMCTAK-----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            + L+  +++  + +     +  D L+ + I SQVE+        + ++    +      
Sbjct: 867 HSQLSQTIQDFNSQRDGEIGNGVDELRYLLIASQVEI--------VEDLAQLSQLQYTTT 918

Query: 625 DKVW-IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + W IGV  AEG KC+RCWNYSTQ G   +HP LC RC   LA
Sbjct: 919 TENWTIGVVNAEGEKCDRCWNYSTQTGESSDHPLLCERCVLALA 962


>gi|119511990|ref|ZP_01631086.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463341|gb|EAW44282.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 958

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/333 (62%), Positives = 243/333 (72%), Gaps = 18/333 (5%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           +  FKRYG+W DW +PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAE
Sbjct: 141 LECFKRYGIWGDWEHPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAE 200

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH SRSIYA F +     +   +L EFLP LG+A+WTTTPWT+P N AVAVN 
Sbjct: 201 AELEYPEGHTSRSIYAAFPITGLSEAAKPVLGEFLPHLGVAIWTTTPWTIPGNLAVAVNG 260

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L Y+VVE+       S   A  +S            F+IVA+DLV  L A    +L ++
Sbjct: 261 DLNYSVVEV-------SRRDAEAQSE-----------FLIVATDLVERLAATLDAELAVR 302

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G  LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHTAPGHGQEDY+   +YGLP
Sbjct: 303 ATFKGQVLEHSTYRHPLFDRESPVVVGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLP 362

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           IL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+ EE Y HKYPYDWRTKKP
Sbjct: 363 ILAPVDDNGDFTQEAGEFAGLNVLGDGNQAVIDALTAAGSLLKEEAYAHKYPYDWRTKKP 422

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TIFRATEQWFASV GFR  A+ AI  VKW+P Q
Sbjct: 423 TIFRATEQWFASVAGFRDEALKAIASVKWIPAQ 455



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/339 (44%), Positives = 210/339 (61%), Gaps = 21/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD+LRLW SSVDY+ DV +G  +++QM+D+  K+R T R+LLG+L D+  V +
Sbjct: 634 KKEPPYGADILRLWASSVDYSSDVRLGGTIIKQMNDVRGKIRNTARFLLGSLDDFDPVKD 693

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++   DLP +D+Y L ++  + + +  +++S+QFF+ FQ +  F +VDLSNFY DVAKDR
Sbjct: 694 AVPLSDLPELDRYMLHRMTEVFEEVTAAFDSFQFFRFFQTVLNFCVVDLSNFYLDVAKDR 753

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +  + VF
Sbjct: 754 LYISSPDAFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYE------TPYKSVF 807

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +D+ W    + E  FW +I ++R +VNKVLE AR  K+IGSSLEAK+ L+  D 
Sbjct: 808 EAGWVQVDKTWLNPELAE--FWQQIRKIRDDVNKVLEQARGEKMIGSSLEAKILLYVKDE 865

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTP--NGLIRNIPYSGEYLVEGKDKVW 628
            L S ++       +  D L+ +FI SQVEVL S     GL  N+           D   
Sbjct: 866 QLRSAVKARNPEIGNGIDELRYLFITSQVEVLDSAEALQGLKYNLQ---------SDSWG 916

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           I V  AEG KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 917 IAVVDAEGKKCDRCWNYSTHVGESAEHPLLCERCVPALA 955


>gi|307153063|ref|YP_003888447.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983291|gb|ADN15172.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 972

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/331 (61%), Positives = 250/331 (75%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR+GVW DW +PYLTL P+YEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 156 SFKRFGVWGDWEHPYLTLTPDYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAE 215

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YAVF +  A  +   +L  +L DLG+A+WTTTPWT+P N AVA+N +L
Sbjct: 216 LEYPEGHTSRSVYAVFPVTKASDTAQKVLKPYLKDLGVAIWTTTPWTLPGNLAVALNPEL 275

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE        S  P  K              + IVA+DLV  L A + T L +K T
Sbjct: 276 TYAVVE--------SGKPICKHK------------YFIVAADLVDKLAATFDTPLTVKAT 315

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G DLE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGLP+L
Sbjct: 316 LKGKDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPVL 375

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+ EEPY+HKYPYDWRTKKPTI
Sbjct: 376 SPVDEKGNFTAEAGQFAGLNVLKDANEAIIKELEEKGALLKEEPYQHKYPYDWRTKKPTI 435

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A++AI  V W+P Q
Sbjct: 436 FRATEQWFASVEGFRDTALEAIKTVTWIPAQ 466



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 152/339 (44%), Positives = 211/339 (62%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ DI  K+R T R+LLGNLHD+    N
Sbjct: 645 KKEPPYGADVLRLWVSSVDYSSDVPIGQNMLKQLGDIRNKIRNTARFLLGNLHDFDPEKN 704

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y DLP +DQY L ++  +   + +++ES+QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 705 AVAYQDLPELDQYMLHRITEVFNEVTDAFESFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 764

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL+  + ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 765 LYISDVDALRRRSCQTVLAVAVENLAKAIAPVLCHLAEDIWQFLPYK------TPYNSVF 818

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L   W+   +     W K+ ++R EVNKV+E+AR  K+IG+SL+AKV L+  D 
Sbjct: 819 ESGWVTLKPDWKRPEL--TAKWSKLRQVRDEVNKVMELARRDKMIGASLDAKVLLYLSDK 876

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L         +    D L+ +F+ SQVE++ S     +    Y  E    G    
Sbjct: 877 ELRKQLEAFNPSDSLSGDRVDELRYLFLSSQVELVDSLK--AMEKANYKSESETLG---- 930

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KCERCWNYST VG F   PTLC RC   L
Sbjct: 931 -VGIVKADGQKCERCWNYSTLVGKFPNDPTLCERCEAAL 968


>gi|434390951|ref|YP_007125898.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
 gi|428262792|gb|AFZ28738.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
          Length = 1093

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/329 (63%), Positives = 249/329 (75%), Gaps = 22/329 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW D++NPYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFQRYGVWGDFDNPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YA F  V+    T+  L EFLP L +A+WTTTPWT+PAN AVAVN +L
Sbjct: 203 LEYPEGHTSRSLYAAFP-VTHLSETASALGEFLPHLSVAIWTTTPWTIPANLAVAVNPEL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV++ +                     +Q K ++IVA+DLV  L     + L IK  
Sbjct: 262 TYAVVQVAN--------------------HEQPK-YLIVAADLVERLSQILASDLAIKAK 300

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           ++G DLE+  Y HP+ +R+ PVVIGGDY+TTESGTGLVHTAPGHGQ+DY+   +YGLPIL
Sbjct: 301 VSGKDLEHTTYRHPLYDRESPVVIGGDYVTTESGTGLVHTAPGHGQDDYIVGQRYGLPIL 360

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD +G FT EAG+F+GL+VLGDGN AV+  L    +L+ EEPY HKYPYDWRTKKPTI
Sbjct: 361 APVDADGNFTAEAGQFAGLNVLGDGNAAVIDALSAAGALLKEEPYVHKYPYDWRTKKPTI 420

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFR AA+ AI +VKW+P
Sbjct: 421 FRATEQWFASVEGFRDAALKAISEVKWIP 449



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/276 (47%), Positives = 178/276 (64%), Gaps = 11/276 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           +E P YGADVLRLWVSSVDYT D  +   +L+Q+S+ YRK+R T R+LLGNLHD+    +
Sbjct: 630 KEEPAYGADVLRLWVSSVDYTSDAPLSKNILKQLSEAYRKIRNTARFLLGNLHDFDPSEH 689

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           S+ Y  LP +D+Y L ++  + K++ E++E+YQFF+ FQ +Q F +VDLSNFY D AKDR
Sbjct: 690 SVPYAQLPELDRYMLHRMTEVFKDVTEAFETYQFFRFFQTVQNFCVVDLSNFYLDTAKDR 749

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +F RRSCQTVLS  L ++ R IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 750 LYISAPDAFRRRSCQTVLSVALENLARAIAPVLCHMAEDIWQQLPYP------TPYKSVF 803

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  LD +W    +     W K+  LR +VNKVLE AR  K+IGSSLEAKV L+  DA
Sbjct: 804 EAGWVQLDSQWHNPELAS--SWQKLRLLRADVNKVLEQARVEKMIGSSLEAKVLLYVPDA 861

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN 607
           +  ++L+ +      A  L  +  +     LP+T N
Sbjct: 862 AFKAQLQTLNPGT--AQPLATVEKVVAQTTLPATQN 895



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 578  REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            ++  T  +  D L+ +FI SQVE++ S P   ++   Y+ +      D++ IGV  A+G 
Sbjct: 1008 KQTATQSNGVDELRYLFIASQVELVDS-PEA-VQQAKYNLQ-----TDELAIGVVNADGK 1060

Query: 638  KCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            KC+RCWNYS  VG   EHP +C RC   LA
Sbjct: 1061 KCDRCWNYSVHVGESPEHPLICERCVSALA 1090


>gi|332712037|ref|ZP_08431967.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
 gi|332349365|gb|EGJ28975.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
          Length = 959

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/330 (62%), Positives = 244/330 (73%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW NPYLTL+P+YEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWENPYLTLNPQYEAAQIGVFGQMVLKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIYA F +  A P    +L  FLP+LG+A+WTTTPWT+P N AVAVN +L 
Sbjct: 204 EYPEGHTSPSIYAAFPITKAGPGIKEILEPFLPNLGVAIWTTTPWTIPGNLAVAVNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE  S                    +  +  F++VA+DLV  L A   T L +K T+
Sbjct: 264 YAVVEDGS--------------------QTNQFQFLLVAADLVERLSATLETPLTVKTTV 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+C Y HP+ +R+  +VIGGDYITTESGTGLVHTAPGHGQEDY    +YGLPILS
Sbjct: 304 KGEALEDCTYQHPLFDRESKIVIGGDYITTESGTGLVHTAPGHGQEDYGVGQRYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +GKFT EAG+F+GL+VL D N A+++ L+   SL+ E PY HKYPYDWRTKKPTIF
Sbjct: 364 PVDADGKFTAEAGQFAGLNVLKDANPAIIEALNTAGSLLKEVPYVHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A++AI  VKW+P Q
Sbjct: 424 RATEQWFASVEGFRDEAINAIASVKWIPAQ 453



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 217/340 (63%), Gaps = 20/340 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV I   +L+Q++D+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KKEPPYGADVLRLWVSSVDYSSDVPISQSILKQLADVYRKIRNTARFLLGNLHDFDPAKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +   +LP +D+Y L ++  + +++ +++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 KVPVQELPELDRYMLHRITEVFEDVTDAFESYQFFRFFQSVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL   + ++ + IAP+L H+AED+WQ LP+        + E VF
Sbjct: 752 LYISAPNSPRRRSCQTVLQIAVENLAKAIAPVLCHMAEDIWQYLPYQ------KSHESVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L+E+W+   +     W  +  +RTEVNKVLE AR  K+IGSSL+AKV L+  D 
Sbjct: 806 ESGWVKLEEQWKNPELAA--SWSTLRTIRTEVNKVLEKARAEKMIGSSLDAKVLLYVKDQ 863

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  RL  M      + +  D L+ + + SQVE++ S     I+   YS E      + +
Sbjct: 864 QLKQRLEAMNPSDSLSGNQVDELRYLLLASQVELVDSLE--AIQTATYSAE-----SETI 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +GV  AEG KC+RCWNY  +VG+  EHPT+C RC   LA
Sbjct: 917 ALGVVNAEGLKCDRCWNYGPKVGTIAEHPTICERCNAALA 956


>gi|443310851|ref|ZP_21040490.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
 gi|442779116|gb|ELR89370.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
          Length = 954

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/330 (61%), Positives = 243/330 (73%), Gaps = 23/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+GVW DW +PYLT+ P+YEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRFGVWGDWEHPYLTMTPDYEAAQIGVFGQMVLKGYIYRGFKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIYA F M S   S    L  +LP L +A+WTTTPWT+PAN AV+VN +L 
Sbjct: 204 EYPEGHTSSSIYAAFAMTSLSESAKSALEPYLPQLSVAIWTTTPWTIPANLAVSVNPRLD 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VVEI S                          ++IVA+DLV TL AK  T+L +K T+
Sbjct: 264 YVVVEIGS-----------------------SSKYLIVAADLVGTLSAKLETQLTVKATV 300

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DLE+  Y HP+ +R+ P++IGG+Y+TTESGTGLVHTAPGHGQEDY+   +YGLPIL+
Sbjct: 301 KGKDLEHSTYRHPLFDRESPILIGGEYVTTESGTGLVHTAPGHGQEDYIVGQRYGLPILA 360

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G FTEEAGKF GL+VLG+GN AV++ L E  SL+  E Y HKYPYDWRTKKPTIF
Sbjct: 361 PVDENGNFTEEAGKFVGLNVLGEGNTAVIEALTEAGSLLKMEAYAHKYPYDWRTKKPTIF 420

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV GFR+ A+  +  V+W+PPQ
Sbjct: 421 RATEQWFASVAGFREEALKVLASVQWIPPQ 450



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 213/337 (63%), Gaps = 18/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           +E P YGADVLRLWVSSVDY+ DV I   +L+QM D+  K+R T R+LLGNLHD+     
Sbjct: 629 KEEPPYGADVLRLWVSSVDYSTDVSISKNILKQMGDVRSKIRNTARFLLGNLHDFDPSKD 688

Query: 393 I-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +  Y+ LP +D+Y L ++  +  ++ ++++ +QFF+ FQ +Q F  +DLSNFY D+ KDR
Sbjct: 689 VVPYEQLPELDRYMLHRITEVFTDVTQAFDRFQFFRFFQAVQNFCTIDLSNFYLDIGKDR 748

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL   L ++ R IAP+L H AED+WQ LP++      +  + VF
Sbjct: 749 LYISAENTLRRRSCQTVLHVALENLTRAIAPVLCHTAEDIWQFLPYS------TPYKSVF 802

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  LDEKW+   +  + FW ++  +RTEVNKVLE AR  K IGS+LEAKV L+  D 
Sbjct: 803 EAGWVQLDEKWQKPEL--LAFWQQLRTIRTEVNKVLEQARVQKAIGSALEAKVLLYIADP 860

Query: 572 SLASRLREM--CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            L  +L+ +   +  +  D L+ +FI+S VE+L  TP  L     YS +      D + I
Sbjct: 861 QLRQQLQALDSTSLTNRVDELRYMFIVSGVELL-KTPEAL-EQAKYSYK-----SDSLGI 913

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           GV+ A+G KC+RCWNYST VG   EHP LC RC   L
Sbjct: 914 GVAAADGHKCDRCWNYSTYVGMSAEHPLLCDRCVAAL 950


>gi|428205874|ref|YP_007090227.1| isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
 gi|428007795|gb|AFY86358.1| Isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
          Length = 978

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/332 (61%), Positives = 244/332 (73%), Gaps = 5/332 (1%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           AS KR+GV  DW N YLTL P+YEAAQI VFGQM L+GY+YRG KPV+WSPSS+TALAEA
Sbjct: 142 ASLKRWGVIGDWENSYLTLKPKYEAAQIGVFGQMVLKGYVYRGFKPVYWSPSSKTALAEA 201

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGH SRS+YA F M    PS    L  FLP L +A+WTTTPWT+PAN AVAVN  
Sbjct: 202 ELEYPEGHTSRSLYAAFPMTHIEPSVFPKLKSFLPHLWVAIWTTTPWTIPANLAVAVNPD 261

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L YAVVE+         A           L+DQ   ++IVA+DLV  L    G +L +K 
Sbjct: 262 LTYAVVEMSR-----KDAETQSTLSAFASLRDQNPQYLIVAADLVERLSVTLGAQLTVKA 316

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G +LE+C+Y HP+ +R+ P+VIGGDY+TTESGTGLVHTAPGHGQEDY   ++Y LPI
Sbjct: 317 TFKGYELEHCKYRHPLCDRESPIVIGGDYVTTESGTGLVHTAPGHGQEDYQVGMRYNLPI 376

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVD +G FT EAG+F+ L+VLG+GN AVV+ L++  SL+ EEPY HKYPYDWRTKKP 
Sbjct: 377 LSPVDADGNFTAEAGQFAKLNVLGEGNAAVVQALEQAGSLLKEEPYVHKYPYDWRTKKPV 436

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           I RATEQWFASVEGFR AA+  I  V+W+P Q
Sbjct: 437 ILRATEQWFASVEGFRDAALQEIAHVRWIPAQ 468



 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 160/346 (46%), Positives = 219/346 (63%), Gaps = 28/346 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           +E P YGADVLRLWVSSVDY+ DV I   +L+Q++D   K+R T R+LLGNLHD+    +
Sbjct: 647 KEEPPYGADVLRLWVSSVDYSADVPISKNILKQLADARNKIRNTARFLLGNLHDFDPSKD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y+ LP +D+Y L ++  +   + ++++ YQFF+ FQ +Q F +VDLS+FY D+AKDR
Sbjct: 707 AVPYEQLPELDRYMLHRMTEVFNEVTQAFDKYQFFRFFQTVQNFCVVDLSSFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTVL   L ++ + IAP+L H+AED+WQ LP+        + E VF
Sbjct: 767 LYISAANSFRRRSCQTVLQIALENLAKAIAPVLCHMAEDIWQYLPYP------KSHESVF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L++KW+   + E   W ++ +LRTEVNKVLE ART K IGSSLEAKV L+  DA
Sbjct: 821 ESGWVKLEDKWQNSELAES--WVQLRQLRTEVNKVLEQARTEKAIGSSLEAKVLLYVADA 878

Query: 572 SLASRLR--------EMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLV 621
           +L  RL+        +  T  +  D L+ +FI S VE+L  P+T   L  N         
Sbjct: 879 NLRQRLQFLNPSTDAQPSTHSNGVDELRYLFITSGVELLDTPATLTELKYNFQ------- 931

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              + + IGV++A+G KC+RCWNYS  VG+   HP LC RC   LA
Sbjct: 932 --SEALGIGVAKADGKKCDRCWNYSIHVGASQAHPLLCERCIPALA 975


>gi|427737553|ref|YP_007057097.1| isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
 gi|427372594|gb|AFY56550.1| Isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
          Length = 962

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/337 (61%), Positives = 242/337 (71%), Gaps = 25/337 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW +PYLT +P+YEA QI VFG M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWEHPYLTSNPQYEAEQIAVFGDMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH S SIYA F M +   +    L+EFLPDLG+A+WTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHTSPSIYAAFPMTNLADAAKDKLSEFLPDLGVAIWTTTPWTIPGNLAVAVNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+++L   D                     ++IVA+DL   L   +G KL +K T
Sbjct: 263 NYAVVEVENLSAVDFK-------------------YLIVAADLAERLSETFGAKLTVKAT 303

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LEN  Y HP+ +R+ PV+IGGDYITTESGTGLVHTAPGHGQEDY+   KY LPIL
Sbjct: 304 FKGKELENSTYRHPLFDRESPVIIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYNLPIL 363

Query: 243 SPVDDEGKFTEEAGKFSGLDVLG------DGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           +PVD  GKFTEEAGKF GL V+G      +GN A++  L E  SLI  EPY HKYPYDWR
Sbjct: 364 APVDANGKFTEEAGKFVGLKVVGAKDQISEGNQAIIDALTEAKSLIKHEPYAHKYPYDWR 423

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           TKKPTIFRATEQWFASVE FR+ A++ I  V+W+P Q
Sbjct: 424 TKKPTIFRATEQWFASVEKFRETALEQIKSVQWIPAQ 460



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 216/337 (64%), Gaps = 18/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDYT DV IG   L+Q+ DI  K+R T R+LLGNLHD+    +
Sbjct: 639 KQEPAYGADVLRLWVSSVDYTNDVGIGKNTLKQIMDIRNKIRNTTRFLLGNLHDFNPETD 698

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++++++L  ID+Y L ++  +   I  +YE++QF + FQ +Q F IVDLSNFY DV KDR
Sbjct: 699 AVAFEELAEIDKYMLHRMTEVFTEITNAYETFQFSRFFQAVQNFCIVDLSNFYLDVGKDR 758

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV+   L ++ + IAP+L H+AED+WQ +P+       +  + VF
Sbjct: 759 LYISSENGSRRRSCQTVMQIALENLTKAIAPVLAHMAEDIWQFIPYE------TPQKSVF 812

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L++KW+   +  + FW KI ++R +VNKVLE AR  K+IGSSLEAKV L+  D 
Sbjct: 813 EAGWVQLEDKWKNPDI--VKFWDKIRQIRNDVNKVLEEARIDKMIGSSLEAKVLLYVKDE 870

Query: 572 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            L + ++ +   + ++ D L+ +F+ SQ E+L    N  + +  +  +      D   IG
Sbjct: 871 ELRNAIKSLNDNSNNNVDELRYLFLTSQAEIL---DNPGVDDCKHKMQ-----SDNWEIG 922

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V++A+G KC+RCWNYST+VG   EHP LC RC   LA
Sbjct: 923 VAKADGHKCDRCWNYSTKVGESTEHPLLCERCVNALA 959


>gi|428214247|ref|YP_007087391.1| isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
 gi|428002628|gb|AFY83471.1| Isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
          Length = 1145

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/331 (62%), Positives = 245/331 (74%), Gaps = 19/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIYRG+KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGIWGDWENPYLTLKPEYEAAQIGVFGKMVLKGYIYRGRKPVHWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F++     + S L   ++  L + +WTTTPWT+P N AV+VN +L
Sbjct: 203 LEYPEGHTSRSIYAAFQITKLADTASDL-KAYMKQLWVGIWTTTPWTIPGNLAVSVNPQL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE  +  E     PA+ K             F+IVA++LV  L    GT L +K  
Sbjct: 262 EYAVVETAADYE-----PASGK-------------FLIVAAELVDRLSETLGTSLTVKAK 303

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE C Y HP+ +R  PVVIGGDY+TTESGTGLVHTAPGHG EDY    +YGLPIL
Sbjct: 304 IKGKDLEGCEYKHPLCDRTSPVVIGGDYVTTESGTGLVHTAPGHGLEDYQVGQRYGLPIL 363

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD  G FTEEAG+F+GL+VL +GN AV++ L    SL+ EEPY HKYPYDWRTKKPTI
Sbjct: 364 APVDGNGNFTEEAGEFAGLNVLDEGNTAVIEALKTAKSLLKEEPYVHKYPYDWRTKKPTI 423

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV+GFR+ AM AI +VKWVP Q
Sbjct: 424 FRATEQWFASVDGFREEAMKAISEVKWVPAQ 454



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/253 (46%), Positives = 172/253 (67%), Gaps = 9/253 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNL D+    +
Sbjct: 633 KQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQLSDVYRKIRNTARFLLGNLEDFDPAKD 692

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y++LP +D+Y L ++  I   + +++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 693 AVPYEELPELDRYMLHRMTEIFAEVTDAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 752

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL+  L ++ + +AP+L H+AED+WQNLP+       +    VF
Sbjct: 753 LYISAVDAKRRRSCQTVLAIALENLAKAVAPVLCHIAEDIWQNLPYP------TPYNSVF 806

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +++ W+   + +   W  + +LR EVN+VLE AR  K +GSSLEAK+ L+ +D 
Sbjct: 807 EAGWVQVEDHWKQPELAKT--WQTLRQLRGEVNQVLEKARQDKAVGSSLEAKLLLYVEDV 864

Query: 572 SLASRLREMCTAK 584
            L   L+ +  A+
Sbjct: 865 KLRQTLQNLNPAR 877



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 588  DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW-IGVSRAEGSKCERCWNYS 646
            D L+ +FI SQVEVL   P  L   + YS +  V G    W IGV  AEG KC+RCWNYS
Sbjct: 1070 DELRYLFITSQVEVL-DNPQRL-EALKYSAQ--VNG----WGIGVVDAEGQKCDRCWNYS 1121

Query: 647  TQVGSFVEHPTLCSRCYEVLA 667
            T VG   E PT+C RC   LA
Sbjct: 1122 THVGESEEDPTICDRCVAALA 1142


>gi|428779761|ref|YP_007171547.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
 gi|428694040|gb|AFZ50190.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
          Length = 960

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/345 (61%), Positives = 251/345 (72%), Gaps = 25/345 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL+P YEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLNPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIYAVF + +        L ++L  LG+A+WTTTPWT+P N AVAVN  L 
Sbjct: 204 EYPEGHTSPSIYAVFPVTALGEDAKASLGDYLFSLGVAIWTTTPWTIPGNLAVAVNPDLN 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE      GD     N   R           ++IVA+DLV  L A     L +K TL
Sbjct: 264 YAVVE----RSGD-----NNDCR-----------YLIVAADLVEKLSATLEASLTVKTTL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+C+Y HP+ +R+  ++IGGDYITTESGTGLVHTAPGHGQEDYV  ++YGLPILS
Sbjct: 304 PGKALEHCKYRHPLFDRESEILIGGDYITTESGTGLVHTAPGHGQEDYVVGMRYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G FT+EAGKF+GL VL  GN A+++ L    SL+ +EPY+HKYPYDWRTKKPTIF
Sbjct: 364 PVDEQGTFTQEAGKFAGLAVLDGGNDAIIEALQTANSLLKQEPYQHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVS 348
           RATEQWFASVEGFR AA+ AI QV W+P Q     G + +R  VS
Sbjct: 424 RATEQWFASVEGFRDAALSAIEQVNWLPQQ-----GENRIRSMVS 463



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/341 (43%), Positives = 217/341 (63%), Gaps = 21/341 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGAD+LRLW SSVDY+ DV IG  +L+Q++D YRK+R T+R+LLGNLHD+    +
Sbjct: 632 KQEPAYGADILRLWASSVDYSADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKYH 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +  ++LP +D+Y L +   + + I  ++E Y+FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 GVLDENLPSLDRYMLHRTSEVFEEITAAFEEYEFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T S  RRSCQTVL+  + ++ R IAP+L H AED+WQN+P+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLAIIVENLARAIAPVLCHTAEDIWQNIPYP------TPHKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W   +  W+   +GE   W K+ E+R EVNKV+E AR  KLIG+SLEAKV L+  D 
Sbjct: 806 ASGWIPKETGWKNPELGE--SWSKLREIRGEVNKVMEQARNEKLIGASLEAKVLLYVPDT 863

Query: 572 SLASRLREMCTAKH-----DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            L  +L +M   +      + D L+ +F+ SQV ++ ++   +++  PY  E      + 
Sbjct: 864 GLREQLSQMNPTESIGEGLNVDELRYLFLASQVALVETSE--VVKTAPYYSE-----TEL 916

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V +G+  A+G KC+RCWNYS  VG F   PT+C RC+  LA
Sbjct: 917 VSVGIIHADGEKCDRCWNYSPTVGQFENDPTICDRCHHALA 957


>gi|428202541|ref|YP_007081130.1| isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
 gi|427979973|gb|AFY77573.1| Isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
          Length = 959

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/330 (61%), Positives = 242/330 (73%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW +PYLTL P+YEAAQI VFGQM+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWEHPYLTLTPDYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIY  F +  A  +   +L  F+P+LG+A+WTTTPWT+P N AVA+N  L 
Sbjct: 204 EYPEGHTSRSIYVTFPITQAGEAAKEVLTPFIPNLGVAIWTTTPWTLPGNLAVALNPDLT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE  S L                     +  ++IVA DLV  L   +G  L +K T+
Sbjct: 264 YAVVEADSSL--------------------CQHRYLIVAKDLVERLSKTFGVNLTVKATI 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DLE+  Y HP+ +R   ++IGGDY+TTESGTGLVHTAPGHGQED++   +YGLPILS
Sbjct: 304 LGKDLEHTTYRHPLYDRLGEILIGGDYVTTESGTGLVHTAPGHGQEDFIVGQRYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A+VK L E+  L+ EEPY HKYPYDWRTKKPTIF
Sbjct: 364 PVDDKGNFTAEAGQFAGLNVLKDANEAIVKELQEKGVLLKEEPYTHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 424 RATEQWFASVEGFRDEALKAIKSVKWIPAQ 453



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 222/340 (65%), Gaps = 20/340 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN- 391
           Q+ P YGADVLRLWVSSVDY+ DV +GP +L+Q++DI  K+R T R+LLGNL+D+   N 
Sbjct: 632 QQEPPYGADVLRLWVSSVDYSADVPLGPNLLKQLNDIRGKIRNTARFLLGNLYDFDPENH 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY+ LP +D+Y L ++  +   + E++E++QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 692 AVSYEQLPELDKYMLHRITEVFAEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S+ RRSCQT+L+  + ++   IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 752 LYISAPDSWRRRSCQTILAVAVENLAVAIAPVLCHLAEDIWQFLPYK------TPYKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W    ++W+   +  +  W K  ++R EVNKV+E+AR GK IG+SLEAKV L+  D 
Sbjct: 806 ESGWVKTKDEWKKPEL--VDSWLKFRQIRNEVNKVMELARNGKSIGASLEAKVLLYVSDG 863

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L  +  A     +  D L+ +F+ SQVE++ S     I +  Y  E      D V
Sbjct: 864 ELRKQLNSINPADSLSGNRVDELRYLFLASQVELVDSLE--AIASADYKSE-----SDLV 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +GV +A+G KCERCWNYST+VG F E PT+C RC   LA
Sbjct: 917 SVGVVKADGQKCERCWNYSTRVGEFPEAPTICERCNAALA 956


>gi|428775198|ref|YP_007166985.1| isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
 gi|428689477|gb|AFZ42771.1| Isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
          Length = 960

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/345 (60%), Positives = 252/345 (73%), Gaps = 25/345 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW+NPYLTL+P YEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWDNPYLTLNPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIYAVF + +   +    L E+   LG+A+WTTTPWT+P N AVAVN  L 
Sbjct: 204 EYPEGHTSPSIYAVFPVTALGEAAQATLGEYASSLGVAIWTTTPWTIPGNLAVAVNPDLT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE                       +D +  + IVA++LV  L A  G  L +K TL
Sbjct: 264 YAVVEQSG--------------------EDAQCQYWIVAAELVEKLSATLGQSLTVKTTL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+C+Y HP+ +R+  V+IGGDYITT+SGTGLVHTAPGHGQEDYV  ++YGLPILS
Sbjct: 304 PGKALEHCQYRHPLFDRESKVLIGGDYITTDSGTGLVHTAPGHGQEDYVVGMRYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G FTEEAG+F+GL+VL  GN AV++ L    SL+ +EPY+HKYPYDWR+KKPTIF
Sbjct: 364 PVDEQGTFTEEAGQFAGLEVLNGGNDAVIEALQAANSLLKQEPYQHKYPYDWRSKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVS 348
           RATEQWFASVEGFR+AA+ AI  V W+P Q     G + +R  VS
Sbjct: 424 RATEQWFASVEGFREAALMAISGVNWLPKQ-----GENRIRAMVS 463



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 219/340 (64%), Gaps = 21/340 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD+LRLW SSVDY+ DV IG  +L+Q++D YRK+R T+R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADILRLWASSVDYSADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKTD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            ++Y+ LP +DQY L +   + + I  ++E ++FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 GVAYEQLPSLDQYMLHRTGEVFEEITAAFEEFEFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ R IAP+L H AED+WQN+P+    +       VF
Sbjct: 752 LYISDANSLRRRSCQTVLAIIVENLARAIAPVLCHTAEDIWQNIPYPVPHKS------VF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W      W+   + E   W K+ ++R EVNKVLE ART KLIG+SLEAK+ L+  D+
Sbjct: 806 ASGWIPQQTDWKNTDLAE--SWSKLRQVRGEVNKVLEQARTEKLIGASLEAKILLYVSDS 863

Query: 572 SLASRLREMCTAKH-----DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            L  +LREM  ++        D L+ +F+ SQVEVL  TP    +N  Y  E      + 
Sbjct: 864 RLQDQLREMNPSETVGDGLHVDELRYLFLASQVEVL-DTPEE-AQNAQYHSE-----TEL 916

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V +G+ +A+G KC+RCWNYSTQVG F + PT+C RC+  L
Sbjct: 917 VTVGIVKADGEKCDRCWNYSTQVGQFEDDPTICERCHHAL 956


>gi|443322252|ref|ZP_21051279.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
 gi|442788042|gb|ELR97748.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
          Length = 948

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/330 (62%), Positives = 240/330 (72%), Gaps = 23/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+G+W DW NPYLTL P YEAAQI VFG+M+L+GYIYRG KPVHWSPSS TALAEAEL
Sbjct: 144 FQRFGIWGDWENPYLTLTPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSGTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIYA F +V+       +L  F  DLG+A+WTTTPWT+P N AVAVNA+L 
Sbjct: 204 EYPEGHTSLSIYAAFPVVALSAQAEKILVPFAEDLGVAIWTTTPWTIPGNLAVAVNAELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+            A   K  R           +IIVA+DLVP L     T L I  T+
Sbjct: 264 YAI------------ASGAKTHR-----------YIIVAADLVPRLSQILETNLTIVATI 300

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+DLE+CRY HP+ +R+  +VIGGDYITTESGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 301 KGADLEHCRYRHPLFDRESSIVIGGDYITTESGTGLVHTAPGHGQEDYIVGQRYGLPILS 360

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG F+GL+VL D N A++  L E  SL+ EEPY HKYPYDWRTKKPTIF
Sbjct: 361 PVDDQGNFTAEAGAFAGLNVLKDANSAIIAALAEAGSLLKEEPYVHKYPYDWRTKKPTIF 420

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A++AI  V W+P Q
Sbjct: 421 RATEQWFASVEGFRTDALEAIASVTWIPSQ 450



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 157/336 (46%), Positives = 219/336 (65%), Gaps = 17/336 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD LRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGNL+D+     
Sbjct: 628 KQEPPYGADTLRLWVSSVDYSTDVRIGNNMLQQLADVYRKIRNTARFLLGNLYDFDPKSQ 687

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y++LP +DQY L +   +   + E++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 688 AVPYEELPQLDQYMLHRATEVFTEVTEAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 747

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV++  L ++ + IAP+L H+AED+WQ LP+          + VF
Sbjct: 748 LYISSLNSHRRRSCQTVIAIILENLAKAIAPVLSHMAEDIWQFLPYT------PPTKSVF 801

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L  +W    +     W  + ELR EVNKV+E+ART K+IGSSLEAKV L++ D+
Sbjct: 802 ESGWIQLSPQWARPELSST--WVTLRELRNEVNKVMELARTAKMIGSSLEAKVLLWSGDS 859

Query: 572 SLASRLRE-MCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
              + L   +  +++  D L+ +F+ S VE+L S        +    +Y V+  + + I 
Sbjct: 860 QTQALLSSYLVDSRYGVDELRYLFLASGVELLTSP------ELITEADYHVQLAN-IAIA 912

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +  AEG KCERCWNYST+VG F EHPT+C RCY VL
Sbjct: 913 LHPAEGDKCERCWNYSTRVGEFAEHPTICERCYPVL 948


>gi|411117277|ref|ZP_11389764.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
 gi|410713380|gb|EKQ70881.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
          Length = 964

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/332 (61%), Positives = 252/332 (75%), Gaps = 20/332 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW++PYLTL+PEYEAAQI VFGQM L+GYIYRG+KPVHWSPSS+TALAEAE
Sbjct: 145 SFKRYGVWGDWDHPYLTLEPEYEAAQIGVFGQMVLKGYIYRGRKPVHWSPSSKTALAEAE 204

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YA F + + P +     + FL +LG+A+WTTTPWT+P N  V+VN  L
Sbjct: 205 LEYPEGHTSRSLYAAFEVTNVPMALQTPFDPFLGELGVAIWTTTPWTIPGNLGVSVNPDL 264

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+     G++A        PG      +  +++VA DLV +L    GT L ++ T
Sbjct: 265 VYAVVEV-----GENA--------PG------RFKYLLVAKDLVESLSDTLGTSLTVRAT 305

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE+  Y HP+ +R+  V+IGGDY+TT+SGTGLVHTAPGHGQEDY   ++YGLPIL
Sbjct: 306 IMGRLLEHITYRHPLFDRESEVLIGGDYVTTDSGTGLVHTAPGHGQEDYQVGMRYGLPIL 365

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G FT EAG  F+GL+VLGDGN AV+  L E  SL+ EEPY+HKYPYDWRTKKPT
Sbjct: 366 APVDDDGNFTAEAGPLFAGLNVLGDGNGAVITALQEAGSLLKEEPYQHKYPYDWRTKKPT 425

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           IFRATEQWFASVEGFR  A+ AI +V+W+P Q
Sbjct: 426 IFRATEQWFASVEGFRDEALKAIAEVRWIPAQ 457



 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 157/341 (46%), Positives = 222/341 (65%), Gaps = 21/341 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           +E P YGADVLRLWVSSVDYT DV+IG  +L+Q+ D+  K+R T R+LLGNLHD+    +
Sbjct: 636 KEEPPYGADVLRLWVSSVDYTSDVLIGKNILKQLGDVRGKIRNTARFLLGNLHDFNPATD 695

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I+YD LP +D+Y L ++  +  ++ +++E++QF++ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 696 VITYDQLPELDRYMLHRITEVFNDVTDAFETFQFYRFFQTVQNFCVVDLSNFYLDIAKDR 755

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV+   L ++ R IAP+L HLAED+WQ LP+A      +  + VF
Sbjct: 756 LYISTANSPRRRSCQTVMWVALENLARAIAPVLSHLAEDIWQFLPYA------TPHKSVF 809

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  L+ +W    + +   W ++ ++RTEVNKVLE ART K IGSSLEAK+ L+  D 
Sbjct: 810 EAGWVKLEPEWNKPELEQK--WEQLRDIRTEVNKVLEKARTDKAIGSSLEAKLLLYVSDP 867

Query: 572 SLASRLREMCTAKHDA-----DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +L   L+E+     ++     D L+ +F+ SQVE+L S P  L        +Y  +  + 
Sbjct: 868 ALQKTLQELNPGDQNSSPNHVDELRYLFLTSQVELLHS-PEELT-----DAQYRTQ-IET 920

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + IGV +A+G KC+RCWNYS  VG F +HP LC RC   +A
Sbjct: 921 LGIGVVKADGKKCDRCWNYSVHVGEFTDHPLLCERCVPAIA 961


>gi|298493101|ref|YP_003723278.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298235019|gb|ADI66155.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 960

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/331 (62%), Positives = 245/331 (74%), Gaps = 16/331 (4%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW++PYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWDHPYLTLKPEYEAAQIGVFGEMFLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIY  F +          L+  LPDLG+AVWTTTPWT+P N AVAVN  L
Sbjct: 203 LEYPEGHVSRSIYTAFPVTKVAEGLKSSLDGLLPDLGVAVWTTTPWTIPGNLAVAVNGAL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE+               SR    ++   K ++IVA++LV  L A    +L +K T
Sbjct: 263 EYAVVEV---------------SRTDTAMQRGFK-YLIVAAELVERLVAILDAELTVKAT 306

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE+  Y HP+ +R+  VV+GGDYITT+SGTGLVHTAPGHGQEDY+   +YGLPIL
Sbjct: 307 FPGKDLEHTTYRHPLFDRESQVVVGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPIL 366

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD  G FT++AGKFSGL+VL +GN A++  L E  SL+ EE Y HKYPYDWRTKKPTI
Sbjct: 367 APVDGSGNFTDDAGKFSGLNVLSEGNQAIIDALTEVGSLLKEEAYPHKYPYDWRTKKPTI 426

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 427 FRATEQWFASVAGFREDALKAISSVRWIPPQ 457



 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 154/337 (45%), Positives = 215/337 (63%), Gaps = 17/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
            + P YGADVLRLWVSSVDY+GDV +G ++++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 NQQPAYGADVLRLWVSSVDYSGDVRLGSKIIKQLADVRNKIRNTARFLLGSLHDFDPKQD 695

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +++DDLP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 GVAFDDLPDLDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +  + VF
Sbjct: 756 LYISAADSFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYK------TPYKSVF 809

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +D++W    + E  FW  +  LRT+VNKV+E AR  KLIGSSLEAKV L     
Sbjct: 810 EAGWVQVDDEWENEDLAE--FWDTLRSLRTDVNKVIEQARVEKLIGSSLEAKVLLHIPHK 867

Query: 572 SLASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            L   ++     K +  D L+ + + SQVE+L S  N  +  + YS +      +   IG
Sbjct: 868 QLWEAIKAFNPVKGNGIDKLRYLLLTSQVEILDS--NEKMAGLKYSTQ-----TEDWTIG 920

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +  A+G KC+RCWNYST VG   EHP LC RC   LA
Sbjct: 921 IVNADGQKCDRCWNYSTHVGESEEHPLLCERCIPALA 957


>gi|428771226|ref|YP_007163016.1| isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
 gi|428685505|gb|AFZ54972.1| Isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
          Length = 968

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/330 (63%), Positives = 239/330 (72%), Gaps = 17/330 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQIEVFG+M+L GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLLPEYEAAQIEVFGKMALNGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIYA F +         L  EF+P+L +A+WTTTPWT+P N AVAVN  L 
Sbjct: 204 EYPEGHTSRSIYASFTLTKLGEKAQSLA-EFMPNLAVAIWTTTPWTIPGNLAVAVNGHLD 262

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVEI   L G+                     ++IVA DLV +L      +L IK  +
Sbjct: 263 YAVVEISPRLVGEGLGVR----------------YLIVAKDLVESLSNTLDCELTIKTVI 306

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE   Y HP+ +R+ PVVIGGDYITTESGTGLVHTAPGHG EDY+T  KY LPILS
Sbjct: 307 KGEELELSTYKHPLFDRESPVVIGGDYITTESGTGLVHTAPGHGLEDYMTGQKYHLPILS 366

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FTEEAG+F GL+VL D N A++  L  + SL+ EE Y HKYPYDWRTKKPTIF
Sbjct: 367 PVDDKGNFTEEAGEFQGLNVLKDANQAIIDALTAKGSLLKEEAYAHKYPYDWRTKKPTIF 426

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV+GFR  A+ AI +VKW+P Q
Sbjct: 427 RATEQWFASVDGFRDLALKAIKEVKWIPSQ 456



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 216/340 (63%), Gaps = 16/340 (4%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSS DY+GDV IG  +++Q++D+YRK+R T R+L+GNLHD+    +
Sbjct: 635 KQQPPYGADVLRLWVSSTDYSGDVRIGDNIIKQLADVYRKIRNTARFLIGNLHDFDPQKD 694

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY+DLP +D+Y L +   +   I E++ESYQFFK FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AVSYEDLPELDKYILHETYLVFSEITEAFESYQFFKFFQKVQNFCVVDLSNFYLDIAKDR 754

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV++  L ++ R IAP+L H+AED+WQNLP+            VF
Sbjct: 755 LYISDPNSPRRRSCQTVMAIILENLARAIAPVLCHMAEDIWQNLPYEKPFNS------VF 808

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E  W  L+ KW   P      W ++ ++RT VNKVL+ AR  K IGSSLEAKV ++    
Sbjct: 809 EGGWVKLESKWVQSPEF-AQKWAELRKIRTGVNKVLDTARNQKAIGSSLEAKVLMYDTTG 867

Query: 572 SLASRLREMCTAK-----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            L   L  +  ++     +  D L+ + ++SQVE++  T    +    Y G+  +E +  
Sbjct: 868 KLMETLTSLNPSEGVNDGNRVDELRYLLLVSQVELV--TDESALSVSQYLGDIQLE-ETT 924

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + + V  A+G KC+RCWNYST VG+F + P +C RC E L
Sbjct: 925 LKVAVVNADGHKCDRCWNYSTTVGTFSDEPLICDRCKEAL 964


>gi|427713712|ref|YP_007062336.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
 gi|427377841|gb|AFY61793.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
          Length = 955

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/331 (61%), Positives = 247/331 (74%), Gaps = 19/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW +W++PYLTL+P YEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 142 SFQRYGVWGNWDHPYLTLNPAYEAAQIGVFGEMVLKGYIYRGLKPVHWSPSSQTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVS+S+YA F +          L+ FL +LG+A+WTTTPWT+P N  V+VN +L
Sbjct: 202 LEYPEGHVSQSLYAAFEVTFLSQPLQLPLDSFLGELGVAIWTTTPWTIPGNLGVSVNPEL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE+         AP   K             ++IVA DLV  LE   GT L I+ T
Sbjct: 262 VYAVVEV------GQDAPGRFK-------------YLIVAKDLVEQLETVLGTTLTIQAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE+ RY HP+  R+  V+IGGDY+TTESGTGLVHTAPGHG EDY    +YGLPIL
Sbjct: 303 VMGKTLEHTRYRHPLFERESEVLIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPIL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD G FTEEAG+F+GL+VLG+GN A++K L+E  +L+ +EPY HKYPYDWRTKKPTI
Sbjct: 363 SPVDDRGSFTEEAGEFAGLNVLGEGNTAIIKALEEVGALLKQEPYNHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV GFR AA++AI QVKW+P Q
Sbjct: 423 FRATEQWFASVAGFRDAALEAIAQVKWIPAQ 453



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 213/341 (62%), Gaps = 19/341 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           +E P YGADVLRLWVSSVDY+ DV +G  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 629 KEDPAYGADVLRLWVSSVDYSTDVPVGKNILKQLSDVYRKIRNTARFLLGNLHDFDPSQD 688

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I Y  LP +D+Y L ++  +  ++  ++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 689 AIPYAQLPELDRYMLHRISEVFTDVTNAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 748

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL+  L ++ + IAP+L HLAED+WQ LP++      +  + VF
Sbjct: 749 LYISAVDAPRRRSCQTVLAIALENLAKAIAPVLCHLAEDIWQFLPYS------TPHKSVF 802

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +S W  L E W    +     W K+ E+RTEVNKVLE AR  K IGS LEAK+ L   D 
Sbjct: 803 QSGWVNLSENWHDPQLAT--RWQKLREIRTEVNKVLEQARADKFIGSPLEAKLLLHIADP 860

Query: 572 SLASRLREM---CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            L   L +      + +  D L+ +F+ SQVE+L S    L+  + Y  E        + 
Sbjct: 861 ELRESLTDFNPDSLSGNGVDELRYLFLTSQVELLDSA--SLLSELKYQVE-----TGGLG 913

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           IG+ +A+G KC+RCWNYS +VG    HP +C RC   L  Q
Sbjct: 914 IGIVKADGEKCDRCWNYSERVGKIEAHPLICERCGAALQGQ 954


>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|383321880|ref|YP_005382733.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383325049|ref|YP_005385902.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|383490933|ref|YP_005408609.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|384436200|ref|YP_005650924.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|451814296|ref|YP_007450748.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501011|sp|P73505.1|SYI_SYNY3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|339273232|dbj|BAK49719.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|359271199|dbj|BAL28718.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359274369|dbj|BAL31887.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|359277539|dbj|BAL35056.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|407958042|dbj|BAM51282.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7613]
 gi|451780265|gb|AGF51234.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 988

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/330 (61%), Positives = 238/330 (72%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYG+W DW  PYLTL PEYEAAQI VFG M+L+GYIYRG KPVHWSPSSRTALAEAEL
Sbjct: 144 FQRYGIWGDWKKPYLTLTPEYEAAQIGVFGAMALKGYIYRGLKPVHWSPSSRTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIY  F +  A    + +L  ++ DL +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSIYVSFPITQAGEKAAEILAPYIDDLAVAIWTTTPWTLPGNLAVALNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE +S +   S                    ++IVA DLV  L   +G KL +K TL
Sbjct: 264 YAVVETESHIFHRS--------------------YLIVALDLVEKLSETFGVKLTVKVTL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LEN  Y HP+ +R  P+VIGGDY+TTESGTGLVHTAPGHGQEDYV   +YGLPILS
Sbjct: 304 QGESLENTCYQHPLFDRVSPIVIGGDYVTTESGTGLVHTAPGHGQEDYVVGQRYGLPILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD  G  TEEAGKF+GL+VL D N A++  L +Q  L+ EE YEHKYPYDWRTKKPTIF
Sbjct: 364 PVDAAGNLTEEAGKFAGLNVLNDANEAIINALQDQKVLLKEEAYEHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASVEGFR  A+ AI +V W+P Q
Sbjct: 424 RATEQWFASVEGFRDQALKAIKEVTWIPTQ 453



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 216/362 (59%), Gaps = 38/362 (10%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWV+SVDY  DV IG  +L+Q+ DI  K+R T R+LLGNLHD+    +
Sbjct: 633 KQEPAYGADVLRLWVASVDYANDVPIGQGILKQLVDIRNKIRNTARFLLGNLHDFNPETD 692

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP +D+Y L ++  +   + E+YES+QFFK FQ +Q F +VDLSNFY D+AKDR
Sbjct: 693 AVAYEDLPELDRYMLHRMTEVFTEVTEAYESFQFFKFFQTVQNFCVVDLSNFYLDIAKDR 752

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQT+L   L ++ + IAP+L HLAED+WQ LP+          E VF
Sbjct: 753 LYISAPNAPRRRSCQTILQLALENLTKAIAPVLCHLAEDIWQFLPYE------KPTESVF 806

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF---- 567
           +S W  LD +W+   + +   W  + +LR  +N++LE AR  K+IGSSLEAK+ +     
Sbjct: 807 QSGWVNLDAQWQQPQLAQK--WVSLRQLRDGINQLLEQARRDKVIGSSLEAKLIIVDPRT 864

Query: 568 ----TDDAS-------LASRLREMCTAKHDAD----TLQRIFIISQVEVLPSTPNGLIRN 612
               TD+             L        D +    +L+ IF+ SQVE + S    +  +
Sbjct: 865 AESGTDEKQGENFVHWFYGWLENFNEPTFDPNDRKISLRNIFLTSQVEFIKSAE--IEPS 922

Query: 613 IPYSGEYLV--EGKDK------VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
             Y    ++  E  D       + I V++A+G KCERCWNYSTQVGSF + PT+C RC E
Sbjct: 923 FTYEETVVINLERHDNNIRTKPIKIIVTKADGHKCERCWNYSTQVGSFSDDPTICERCNE 982

Query: 665 VL 666
            L
Sbjct: 983 AL 984


>gi|170078363|ref|YP_001735001.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886032|gb|ACA99745.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 963

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/332 (60%), Positives = 237/332 (71%), Gaps = 20/332 (6%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+RYGVW DW NPYLTL PEYEAAQI VFG M+L+GYIYRG KPVHWSPSS+TALAEA
Sbjct: 142 AGFQRYGVWGDWENPYLTLTPEYEAAQIGVFGDMALKGYIYRGLKPVHWSPSSQTALAEA 201

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGH S+SIY  F +    P     L EF   LG+A+WTTTPWT+P N AVA+N  
Sbjct: 202 ELEYPEGHTSQSIYVSFPITDLSPEAKATLGEFADSLGVAIWTTTPWTLPGNLAVAINPD 261

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L+YAVVE       D +  A K              +++VA DL  +L   +   L +K 
Sbjct: 262 LEYAVVET------DGSLCAQK--------------YLVVAKDLAESLTKTFDAALTVKT 301

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  G  LE+C Y HP+ NR  PVV GGDYITTESGTGLVHTAPGHGQEDY+T  KYGLPI
Sbjct: 302 SFKGEILEHCTYQHPLYNRTSPVVAGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPI 361

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVD EG  TEEAG+F+GL+VL   N A++  L E+ +L+ +E Y+HKYPYDWRTKKPT
Sbjct: 362 LSPVDAEGTLTEEAGEFAGLNVLDGANNAIIAALTEKRALLKQEAYQHKYPYDWRTKKPT 421

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           IFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 422 IFRATEQWFASVEGFRDEALKAIKGVRWIPAQ 453



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 157/343 (45%), Positives = 218/343 (63%), Gaps = 24/343 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGN+HD+    ++++
Sbjct: 635 PPYGADVLRLWVSSVDYSSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKDAVA 694

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y DLP +D+Y L Q  N+   + E++E +QFFK FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 695 YSDLPELDKYILHQTHNVFTEVTEAFEEFQFFKFFQKVQNFCVVDLSNFYLDIAKDRLYI 754

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
               +  RRSCQTV++  L ++ + IAP+L H+AED+WQNLP+       +  + VF + 
Sbjct: 755 SDVNAPRRRSCQTVMAIILETLAKAIAPVLCHMAEDIWQNLPYE------TEHQSVFSAG 808

Query: 515 WPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
           W  LD +W      E  F  W ++ ++R  VN VLE ART KLIG+SLEAK+ +   D +
Sbjct: 809 WYQLDPQW---AADETLFQRWEELRKIRNSVNLVLEKARTEKLIGASLEAKILMRDVDGA 865

Query: 573 LASRLREMCTAKH-----DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY-LVEGKDK 626
           L   L  +  A         D L+ + +ISQVE + +     + +  Y     L EG  K
Sbjct: 866 LTDWLAALNPADSLSESPRVDELRYLLLISQVEFVTAA----LDDQQYQDTLELAEG--K 919

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           + I V +A+G KC+RCWNYSTQVG+F + PT+C RC   LA Q
Sbjct: 920 LQIAVVKADGHKCDRCWNYSTQVGTFTDDPTICERCNAALAGQ 962


>gi|300868292|ref|ZP_07112921.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300333727|emb|CBN58105.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 1183

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/341 (61%), Positives = 241/341 (70%), Gaps = 12/341 (3%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYG+W +W +PYLTL PEYEAAQI VF QM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGIWGNWEHPYLTLKPEYEAAQIGVFAQMVLKGYIYRGMKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIY    +     S   L   +LP+L LAVWTTTPWT+PAN AVAVN  L 
Sbjct: 204 EYPEGHTSRSIYVALAIAKLAKSAKAL-TPYLPNLHLAVWTTTPWTIPANLAVAVNPDLT 262

Query: 124 YAVVEI----------QSLLEGDSAAPANKKSRPGNV-LKDQKKVFIIVASDLVPTLEAK 172
           YAVV+           Q+  E +  +    K  P N  L  + +  +IVA+DLV  L A 
Sbjct: 263 YAVVKFSGEGLSTNGAQNSPESEELSAIELKKTPENKELSTKVEKTLIVAADLVEKLSAT 322

Query: 173 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 232
             TKL +  T+ G DLE   Y HP+ +R  PVVIGGDYIT +SGTGLVHTAPGHGQEDY 
Sbjct: 323 LNTKLEVLATIQGKDLEKSTYKHPLFDRISPVVIGGDYITADSGTGLVHTAPGHGQEDYQ 382

Query: 233 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
              +YGLP+LSPVDD G FT EAG+F GL+VLGDGN AV+  L    +LI EE Y H YP
Sbjct: 383 VGQRYGLPLLSPVDDNGNFTAEAGQFEGLNVLGDGNGAVIDALAGAGALIKEEVYAHSYP 442

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           YDWRTKKPTIFRATEQWFASVEGFR+AA+ AI  VKW+P Q
Sbjct: 443 YDWRTKKPTIFRATEQWFASVEGFREAALKAIADVKWIPAQ 483



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 118/244 (48%), Positives = 171/244 (70%), Gaps = 9/244 (3%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGADVLRLWVSSVDY+ DV +G  +L+Q +D+YRK+R T R+LLGNLHD+    N++SY+
Sbjct: 658 YGADVLRLWVSSVDYSADVPLGKNILKQQADVYRKIRNTARFLLGNLHDFDPAKNAVSYE 717

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +LP +D+Y L ++  +   ++++++S+QFF+ FQ +Q F +VDLSNFY D+AKDRLY   
Sbjct: 718 ELPELDRYMLHRMTEVFTEVKDAFDSFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISA 777

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRSCQTVL+  + S+ R IAP+L HLAED+WQ +P+       +A + VFE+ W 
Sbjct: 778 EDSLRRRSCQTVLAIAVESLARAIAPVLCHLAEDIWQYIPYP------TAYKSVFEAGWV 831

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            +D +W    +G+   W  + ++R EVNKVLE+AR+ K IG+ LEAKV L+  DA    +
Sbjct: 832 QIDHRWHNPELGK--SWEYLRQVRGEVNKVLELARSEKAIGAPLEAKVLLYVPDAEKREK 889

Query: 577 LREM 580
           L+ +
Sbjct: 890 LQAL 893



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 22/181 (12%)

Query: 491  VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVL--E 548
            VWQ+L FA   ++ S  E V   K  VL ++      GE     K +  + E  KV    
Sbjct: 1022 VWQHLLFAANRQELS--EKVETLKVEVLGKQ-----AGETVVEAKAIASQPEEIKVEVPA 1074

Query: 549  VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            ++ T +++ S L A        AS   +L    T  +  D L+ + I SQVE+L S+   
Sbjct: 1075 ISNTAEIV-SQLSA----VKKPASAIKKLHNSATG-NGVDELRYLLIASQVELLESSEG- 1127

Query: 609  LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
             +  IPYS        + + +GV +A+G KC+RCWNYST VG   EHP LC RC   LA 
Sbjct: 1128 -LEGIPYSF-----NSEDLGVGVVKADGQKCDRCWNYSTHVGESEEHPLLCERCVPALAG 1181

Query: 669  Q 669
            Q
Sbjct: 1182 Q 1182


>gi|425453588|ref|ZP_18833345.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
 gi|389801435|emb|CCI19402.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
          Length = 952

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/328 (60%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 213/339 (62%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +   W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIAPAWNNRKLADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L      +    +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCESLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|425446771|ref|ZP_18826770.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
 gi|389732843|emb|CCI03274.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
          Length = 952

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/328 (60%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLKIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 1152

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/331 (61%), Positives = 239/331 (72%), Gaps = 18/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW +PY+TL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGDWEHPYMTLSPEYEAAQIGVFGKMVLKGYIYRGLKPVHWSPSSKTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIYA F++ +   +    L  +L  L +A+WTTTPWT+P N AV+VN  L
Sbjct: 203 LEYPEGHKSRSIYAAFKITNLAKAVEKSLESYLEKLWVAIWTTTPWTIPGNLAVSVNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV+     + D A   +K                IVA++ V  L A  GT L    T
Sbjct: 263 NYAVVKP----DADYAMGKDK--------------LFIVAAEAVERLSATLGTTLTPVAT 304

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLENC Y HP+ +R+  +VIGGDY+TTESGTGLVHTAPGHGQEDY+   +Y L IL
Sbjct: 305 VKGEDLENCTYQHPLFDRESKIVIGGDYVTTESGTGLVHTAPGHGQEDYIVGQRYSLSIL 364

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  GKFT EAG+F+GL VL +GN+AV++ L    SL+ EEPYEHKYPYDWRTKKPTI
Sbjct: 365 SPVDGNGKFTAEAGEFTGLSVLAEGNIAVIEALQNVNSLLKEEPYEHKYPYDWRTKKPTI 424

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI +V W+P Q
Sbjct: 425 FRATEQWFASVEGFRSEALKAIAEVNWIPAQ 455



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 116/249 (46%), Positives = 173/249 (69%), Gaps = 9/249 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD+LRLWVSSVDY+ DV +G  +L+Q++DIYRK+R T R+LLGN+HD+    +
Sbjct: 634 KQEPAYGADILRLWVSSVDYSSDVPLGKNILKQIADIYRKIRNTARFLLGNIHDFDPAKD 693

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+++P +D+Y L ++  +   +++ ++ +Q+F+ FQ IQ F +VDLSNFY D+AKDR
Sbjct: 694 AVAYEEMPELDRYMLHRITEVFAEVKDGFDKFQYFRFFQTIQNFCVVDLSNFYLDIAKDR 753

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T +F RRSCQTVL   + ++ + IAP+LPH+AED+WQNLP+       +  + VF
Sbjct: 754 LYISATDAFRRRSCQTVLVVAVENLAKAIAPVLPHMAEDIWQNLPYP------TPCKSVF 807

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L+EKW    +  +  W ++ + RTEVNKVLE AR  K IGS LEAKV L+  D 
Sbjct: 808 ESGWVKLEEKWHNPEL--VKLWEELRKTRTEVNKVLEKARAEKAIGSPLEAKVLLYVKDT 865

Query: 572 SLASRLREM 580
               ++++ 
Sbjct: 866 KFREQIQDF 874



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 7/93 (7%)

Query: 575  SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
            + ++ +  + +  D L+ +FI SQVE+L S P  L  N+ Y         D + IGV +A
Sbjct: 1064 NNVKAIIPSGNGVDELRYLFITSQVELLES-PECL-SNLEYKSIL-----DSLGIGVVKA 1116

Query: 635  EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +G KCERCWNYST VG F E PT+C RC   LA
Sbjct: 1117 DGEKCERCWNYSTHVGDFSEDPTICERCVVALA 1149


>gi|425460311|ref|ZP_18839792.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
 gi|389827009|emb|CCI22052.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
          Length = 952

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/328 (60%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADIFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WSKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|425436914|ref|ZP_18817344.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
 gi|389678274|emb|CCH92835.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
          Length = 952

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/328 (59%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STSVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADIFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +AEG KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKAEGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|434388785|ref|YP_007099396.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
 gi|428019775|gb|AFY95869.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
          Length = 1143

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/331 (61%), Positives = 245/331 (74%), Gaps = 17/331 (5%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GVW +W+ PYLTL PEYEAAQ+ VFG+M L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRLGVWGEWDKPYLTLQPEYEAAQVGVFGKMVLEGYIYRGLKPVHWSPSSKTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGHVSRSI+A F++     +   +L  F  DL +A+WTTTPWT+PAN AVAVN  L 
Sbjct: 204 EYPEGHVSRSIFAAFKVTQVADAAKAILEPFQEDLAVAIWTTTPWTIPANLAVAVNPDLN 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE+        AAP + K        D  K + IVA+D+V  L AK+   L  K  +
Sbjct: 264 YAIVEV--------AAPEDNKY-------DGCK-YAIVAADMVEGLAAKFNLHLTTKAEI 307

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+DLE+  Y HP+ +R  PV+IGGDYITTESGTGLVHTAPGHGQEDY+   KYGL IL+
Sbjct: 308 KGADLEHTTYKHPLYDRHSPVIIGGDYITTESGTGLVHTAPGHGQEDYIVGQKYGLSILA 367

Query: 244 PVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           PVD +G FT+EAG+   G +VLGDGN  V++ L E  SLI EE Y HKYPYDWRTKKPTI
Sbjct: 368 PVDGDGNFTDEAGELLKGANVLGDGNELVIQALIEARSLIKEESYAHKYPYDWRTKKPTI 427

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASV+GF++AA+ AI +V+W+P Q
Sbjct: 428 FRATEQWFASVKGFKEAALKAISEVEWIPAQ 458



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 127/247 (51%), Positives = 170/247 (68%), Gaps = 9/247 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q+ P YGAD++RLWVSSVDY  +V IGP +L+Q+SD  RK+R T R+LLGN+HD+    +
Sbjct: 637 QKDPAYGADLVRLWVSSVDYATEVRIGPNILKQLSDASRKIRNTARFLLGNIHDFDPAKD 696

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y +L  +D+Y L ++  ++  I E+++ YQFFK FQ++Q F IVDLSNFY D+AKDR
Sbjct: 697 AVPYAELAELDRYMLHRMSVVLAEITEAFDRYQFFKFFQLVQNFCIVDLSNFYLDIAKDR 756

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    TSF RRSCQTVL+  L ++ R IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 757 LYISAPTSFRRRSCQTVLAIILENLTRAIAPVLCHMAEDIWQYLPYQ------TPYKSVF 810

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  LD +W    +     W KI +LRT+VNKV+E ART K IGSSLEAKV L   D 
Sbjct: 811 ESGWVKLDPQWLQPDLA--LNWDKIRDLRTDVNKVMEQARTDKAIGSSLEAKVLLQVSDP 868

Query: 572 SLASRLR 578
            L ++LR
Sbjct: 869 ELKAKLR 875



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 13/89 (14%)

Query: 582  TAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVE-GKDKVWIGVSRAEGSK 638
             A +  D L+  F+ SQVE++   S   GL        +  VE GK    IGV  A+G+K
Sbjct: 1062 NASNGIDELRYFFLASQVELIDDASRLEGL------QHQTTVETGK----IGVVNADGTK 1111

Query: 639  CERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            C+RCWNYS  VG   EHP +C RC + LA
Sbjct: 1112 CDRCWNYSPTVGQNSEHPVICDRCVDALA 1140


>gi|222836391|gb|EEE74798.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/693 (36%), Positives = 381/693 (54%), Gaps = 84/693 (12%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R GV  DW+NPYLT++ E EA  I   G++   G++Y+G KPVHW     ++LAEA
Sbjct: 61  ADFIRMGVLGDWDNPYLTMNFETEAEIIRTLGKVIQNGHLYKGSKPVHWCLDCASSLAEA 120

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           E+EY E  VS SIY  F  VSA         L +    L   +WTTTPWT+P+N A+AVN
Sbjct: 121 EVEY-EDKVSPSIYVRFAAVSAAEVEEKFNALGKGQGALSAVIWTTTPWTLPSNRAIAVN 179

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV- 178
           A+L+Y +V++            N++              +I+A++LV T++   G + + 
Sbjct: 180 AELEYQLVQL-----------GNER--------------VILATELVQTVQNALGIEQIQ 214

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           I  +  G DLE  R+ HP  +   P+++G D++T + GTGLVHTAP HGQ+D+V S KYG
Sbjct: 215 ILGSAKGGDLELIRFNHPFYDFSVPMILG-DHVTVDGGTGLVHTAPDHGQDDFVVSKKYG 273

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +   V ++GKF      F+G  V  + N  V++ L E  +L+  E  +H YP+ WR K
Sbjct: 274 LEMAGLVANDGKFISSTPFFAGKGVF-EANDLVLEKLKETGALLKLERIKHSYPHCWRHK 332

Query: 299 KPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP--------------------QEAP 336
            P IFRAT QWF  +E    R  A+  I  V+W+P                     Q   
Sbjct: 333 TPIIFRATPQWFIGMETQDLRIKALSEIKSVRWIPSWGEARIDKMVANRPDWCISRQLWN 392

Query: 337 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISY 395
             GAD+LRLWV+S DYTG++ +  ++L    D YR++R T R+LL NL+ +   N  ++ 
Sbjct: 393 KNGADILRLWVASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDPKNDLVNP 452

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           +++  +D++A+         I+E+Y++YQF  + Q + RF  +++ +FY D+ KDR YT 
Sbjct: 453 EEMISLDRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTT 512

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 515
              S  RRSCQT L     ++VR IAPIL   A+++W  LP     +  + AEFVF  ++
Sbjct: 513 KADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYLP-----KLDNRAEFVFTEEF 567

Query: 516 P----VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
                 LDE  +     +  +W ++L++R EVN+VLE AR  KLIG+ LEAKV ++  + 
Sbjct: 568 YDGLFGLDESDKL----DDTYWQQLLKVRAEVNRVLEQARNDKLIGAGLEAKVTVYASE- 622

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            +   L ++       + L+ + I SQV V P +   +        E  + G   + + V
Sbjct: 623 EIRPLLEQL------GNELRFVLITSQVVVKPLSKADV-------AESELTG---LAVKV 666

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
            RA+G KC RCW+++T +GS  EH  +C RC E
Sbjct: 667 ERADGEKCPRCWHFATDIGSNKEHSHICGRCIE 699


>gi|425450538|ref|ZP_18830363.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
 gi|389768600|emb|CCI06355.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
          Length = 952

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/328 (59%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|443652604|ref|ZP_21130866.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
 gi|159030898|emb|CAO88579.1| ileS [Microcystis aeruginosa PCC 7806]
 gi|443334274|gb|ELS48795.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
          Length = 952

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/328 (59%), Positives = 245/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   + T L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADIFNTTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WSKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      + V
Sbjct: 857 TLQKELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SEFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|422302702|ref|ZP_16390062.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
 gi|389788022|emb|CCI16652.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
          Length = 952

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/328 (59%), Positives = 243/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L       L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTLNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDLV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|425467689|ref|ZP_18846968.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
 gi|389829462|emb|CCI29178.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
          Length = 952

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 244/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   +   L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDQGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           SL   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 SLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|254409885|ref|ZP_05023665.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182921|gb|EDX77905.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1163

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/352 (57%), Positives = 245/352 (69%), Gaps = 25/352 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW++PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FQRYGVWGDWDHPYLTLTPEYEAAQIGVFGQMVLKGYIYRGMKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+YA F +  A  S    L  +L DLG+A+WTTTPWT+P N AVAVN +L 
Sbjct: 204 EYPEGHTSRSLYAAFPLTKATDSVEAKLKPYLVDLGVAIWTTTPWTIPGNLAVAVNPELT 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNV-------LKDQKKV---------------FIIV 161
           YA+VE+    E  ++  A K S+P           +D+  +               ++IV
Sbjct: 264 YAIVEVS---EKSASQEAEKSSKPSKTKAKGFAPTQDEDSLESESADFDTEAEGFKYLIV 320

Query: 162 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 221
           A++LV  L       L +K TL G +L+ C Y HP+ +R+ P+VIGGDYITTESGTGLVH
Sbjct: 321 AAELVERLSQTLDKDLTVKTTLKGQELDQCTYRHPLFDRESPIVIGGDYITTESGTGLVH 380

Query: 222 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 281
           TAPGHGQEDY+   +Y LPI+SPVD  G FT EAG F+GL+VL + N AV+  L E  S 
Sbjct: 381 TAPGHGQEDYIVGQRYNLPIISPVDGNGDFTTEAGPFAGLNVLRNANPAVIDALKEAGSF 440

Query: 282 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           + EE Y HKYPYDWRTK+PTIFRATEQWFASV+GFR+  M AI  V W+P Q
Sbjct: 441 LKEENYIHKYPYDWRTKEPTIFRATEQWFASVDGFREEVMKAIQSVNWIPSQ 492



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 172/249 (69%), Gaps = 9/249 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD+LRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    N
Sbjct: 671 KQEPPYGADMLRLWVSSVDYSVDVPIGQGILKQLSDIYRKIRNTARFLLGNLHDFDPAKN 730

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+ LP +D+Y L ++  +   + E+++SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 731 AVAYEQLPELDRYMLHRITEVFGEVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDMAKDR 790

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 791 LYISHPDSVRRRSCQTVLAIALENLARSIAPVLCHTAEDIWQYLPYP------TPYKSVF 844

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  LDE W+   + E   W ++  +RTEVNKVLE AR  K+IGSSLEAKV L   D 
Sbjct: 845 ESGWVQLDETWKKPELVEK--WTRLRAIRTEVNKVLEQARAEKMIGSSLEAKVLLHVPDT 902

Query: 572 SLASRLREM 580
            L  +LR++
Sbjct: 903 QLRQQLRKL 911



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 7/82 (8%)

Query: 588  DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYST 647
            D L+ +F+ SQVEVL S P+  I N  Y  +      ++VW+G+ +AEG KC+RCWNYS 
Sbjct: 1088 DELRYLFLASQVEVLDS-PDA-IENADYRSQ-----SEQVWVGIVKAEGEKCDRCWNYSP 1140

Query: 648  QVGSFVEHPTLCSRCYEVLAVQ 669
             VG  +EHPT+C RC   LA Q
Sbjct: 1141 FVGKIIEHPTICERCRAALAGQ 1162


>gi|425441444|ref|ZP_18821718.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
 gi|389717819|emb|CCH98134.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
          Length = 952

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 244/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   +   L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 214/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L      +    +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCESLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|334118453|ref|ZP_08492542.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
 gi|333459460|gb|EGK88073.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
          Length = 1197

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/331 (60%), Positives = 233/331 (70%), Gaps = 19/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW DW +PYLT+ PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 142 SFQRYGVWGDWEHPYLTMKPEYEAAQIGVFGQMVLKGYIYRGFKPVHWSPSSKTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIY  F +     S    L  ++P L  A+WTTTPWT+PAN A+AVN +L
Sbjct: 202 LEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAIWTTTPWTIPANLAIAVNPEL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE                  PGN    Q+  FI+VA D V  L A + T L I  T
Sbjct: 262 TYAVVE-----------------PPGNAHIAQQ--FILVAVDAVDRLSATFNTNLKILAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE C Y HP+ +R+ P+V GGDYIT +SGTGLVHTAPGHGQED++   + GLP+L
Sbjct: 303 FKGKELEGCSYKHPLFDRESPIVAGGDYITADSGTGLVHTAPGHGQEDFIVGKRCGLPVL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD+ G FT EAG+F GL+VLG+GN AV+  L E   LI EE Y H YPYDWRTKKPTI
Sbjct: 363 TPVDENGNFTAEAGQFVGLNVLGNGNAAVIDALGEANCLIKEESYAHSYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 423 FRATEQWFASVEGFRDEALKAIADVNWIPAQ 453



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 164/244 (67%), Gaps = 9/244 (3%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGADVLRLWVSSVDY+ DV +G  +L+Q SD+YRK+R T ++LLGNLHD+    ++++Y+
Sbjct: 628 YGADVLRLWVSSVDYSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVAYE 687

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +LP +D+Y L ++  +   +++++ES+QF + FQ +Q F  VDLSNFY D+AKDRLY   
Sbjct: 688 ELPELDRYMLHRMCEVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISA 747

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           T +  RRSCQTV++  + ++ R IAP+L H+AED+WQ LP+       +  + VFE+ W 
Sbjct: 748 TDTRRRRSCQTVIAIAVENLARAIAPVLCHMAEDIWQYLPYP------TPYKSVFEAGWV 801

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            +D  W    +     W  + ++R EVNKVLE AR  K IGSSLEAKV L+  D     +
Sbjct: 802 QIDASWHNPELAT--RWQYLRQVRGEVNKVLEKARMEKAIGSSLEAKVLLYVPDVEKREQ 859

Query: 577 LREM 580
           L+ +
Sbjct: 860 LQAL 863



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 7/75 (9%)

Query: 588  DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYST 647
            D L+ +FI S+VE++ S  N +++ +PYS +       ++ IGV +A+G KC+RCWNYST
Sbjct: 1122 DELRYLFITSEVELVES--NEILQELPYSYQ-----SPELAIGVVKADGEKCDRCWNYST 1174

Query: 648  QVGSFVEHPTLCSRC 662
             V   +EHP +C RC
Sbjct: 1175 HVSESIEHPLICERC 1189


>gi|440754805|ref|ZP_20934007.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
 gi|440175011|gb|ELP54380.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
          Length = 952

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 244/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   +   L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 959

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/330 (60%), Positives = 246/330 (74%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW DW NPYLTL PEYEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMVLKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSI+A F +++A    + +L  FL +LG+A+WTTTPWT+P N AVA+N  L 
Sbjct: 204 EYPEGHTSRSIFAAFPIINASKDAAEILEPFLNNLGVAIWTTTPWTLPGNLAVALNPDLN 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE  S                 +V K Q   ++IVA DLV  L   + T+L +K T+
Sbjct: 264 YAVVEQTS-----------------DVCKYQ---YLIVAVDLVEKLSTTFETELTVKATI 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL +LS
Sbjct: 304 PGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGVLS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +G FTEEAG+F+GL+VL + N  ++  L E+ SL+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 364 PVDAKGNFTEEAGQFAGLNVLKNANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV+GFR+AA+ AI  V+W+P Q
Sbjct: 424 RATEQWFASVKGFREAALTAIKTVQWIPAQ 453



 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 217/340 (63%), Gaps = 22/340 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV +G  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPLGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKRD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       ++ + VF
Sbjct: 752 LYISHPDSMRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFLPYE------TSEKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W    ++W    +     W KI  +R EVN  LE+AR  K IGSSL+AKV L+  D 
Sbjct: 806 QAGWVKTSKQWGNAELS--VSWTKIRAMRNEVNNALELARKEKEIGSSLDAKVLLYVPDQ 863

Query: 572 SLASRLREM-----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            L  +L +       T  H  D L+   + SQVE++ S  +  I+   Y  E      D 
Sbjct: 864 DLRQQLEKFNPTDSLTGNH-VDELRYFVLASQVELVDSLDS--IKQADYQSE-----SDL 915

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 916 VSVGVIKAEGKKCDRCWNYSTKVGEFKDDPTICERCNAAL 955


>gi|390440600|ref|ZP_10228826.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
 gi|389836062|emb|CCI32952.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
          Length = 952

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 244/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   +   L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|166363857|ref|YP_001656130.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082327|sp|B0JSP4.1|SYI_MICAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166086230|dbj|BAG00938.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 952

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 244/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L   +   L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTFNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           SL   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 SLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +AEG KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKAEGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|172039458|ref|YP_001805959.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|254782384|sp|B1WVA3.1|SYI_CYAA5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|171700912|gb|ACB53893.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 959

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/330 (60%), Positives = 243/330 (73%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSI+A F ++ A   T  +L  FL  LG+A+WTTTPWT+P N AVA+N  L 
Sbjct: 204 EYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLAVALNPDLN 263

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE  S                 +V   Q   ++IVA+DLV  L   + T+L +K TL
Sbjct: 264 YAVVEQNS-----------------DVCNYQ---YLIVAADLVERLSTTFETELTVKATL 303

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL ILS
Sbjct: 304 PGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGILS 363

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +G FTEEA +F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 364 PVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIF 423

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV+GFR AA+ AI  V+W+P Q
Sbjct: 424 RATEQWFASVKGFRDAALTAIKTVQWIPAQ 453



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 217/339 (64%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            + W    ++W    +     W KI  +R EVN  LE+AR  K IGSSL+AKV L+  + 
Sbjct: 806 TAGWVKTSKQWENSELSAS--WAKIRGIRNEVNNALELARKEKAIGSSLDAKVLLYVPEQ 863

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L  +L +   A     +  D L+   + SQVE++ S  +  I+N  Y  E      D V
Sbjct: 864 NLRQQLEKFNPADSLTGNHVDELRYFVLASQVELVDSLDS--IKNADYHSE-----SDLV 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 917 SVGVIKAEGEKCDRCWNYSTKVGEFKDDPTICERCNAAL 955


>gi|354552275|ref|ZP_08971583.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
 gi|353555597|gb|EHC24985.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
          Length = 940

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/330 (60%), Positives = 243/330 (73%), Gaps = 20/330 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 125 FKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAEL 184

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSI+A F ++ A   T  +L  FL  LG+A+WTTTPWT+P N AVA+N  L 
Sbjct: 185 EYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLAVALNPDLN 244

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE  S                 +V   Q   ++IVA+DLV  L   + T+L +K TL
Sbjct: 245 YAVVEQNS-----------------DVCNYQ---YLIVAADLVERLSTTFETELTVKATL 284

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL ILS
Sbjct: 285 PGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGLGILS 344

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +G FTEEA +F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 345 PVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKKPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RATEQWFASV+GFR AA+ AI  V+W+P Q
Sbjct: 405 RATEQWFASVKGFRDAALTAIKTVQWIPAQ 434



 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 217/339 (64%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKD 672

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 733 LYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 786

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            + W    ++W    +     W KI  +R EVN  LE+AR  K IGSSL+AKV L+  + 
Sbjct: 787 TAGWVKTSKQWENSELSAS--WAKIRGIRNEVNNALELARKEKAIGSSLDAKVLLYVPEQ 844

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L  +L +   A     +  D L+   + SQVE++ S  +  I+N  Y  E      D V
Sbjct: 845 NLRQQLEKFNPADSLTGNHVDELRYFVLASQVELVDSLDS--IKNADYHSE-----SDLV 897

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC   L
Sbjct: 898 SVGVIKAEGEKCDRCWNYSTKVGEFKDDPTICERCNAAL 936


>gi|425468553|ref|ZP_18847563.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
 gi|389884790|emb|CCI34946.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
          Length = 952

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/328 (59%), Positives = 243/328 (74%), Gaps = 27/328 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAEL
Sbjct: 144 FKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLKPVHWSPSSQTALAEAEL 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTTPWT+P N AVA+N +L 
Sbjct: 204 EYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTTPWTLPGNLAVALNPELN 260

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VVE                          +  ++IVA+DLV  L       L IK T+
Sbjct: 261 YSVVETS------------------------ESNYLIVATDLVEKLADTLNRTLTIKATV 296

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGHGQEDY+   +YGLPILS
Sbjct: 297 KGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGHGQEDYIVGQRYGLPILS 356

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE Y+HKYPYDWRTKKPTIF
Sbjct: 357 PVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEAYQHKYPYDWRTKKPTIF 416

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 417 RATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/339 (46%), Positives = 215/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  +D  W    + +   W K  +LRTEVNKV+E AR  K IG+SLEAKV L+  D 
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMETARNDKAIGASLEAKVLLYVPDE 856

Query: 572 SLASRLR--EMCTA--KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           +L   L     C +   +  D L+ +F+ SQVE++       I+   Y GE      D V
Sbjct: 857 TLQQELELFNNCDSLTGNKVDELRYLFLSSQVELVSDI--SAIQTAEYKGE-----SDFV 909

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +G+ +A+G KC+RCWNYSTQVG F + PT+C RC   L
Sbjct: 910 SVGIVKADGEKCDRCWNYSTQVGKFADDPTICERCNAAL 948


>gi|427724546|ref|YP_007071823.1| isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
 gi|427356266|gb|AFY38989.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
          Length = 963

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/331 (59%), Positives = 239/331 (72%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW DW NPYLTL P+YEAAQIEVFG+M+L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFQRYGVWGDWENPYLTLTPDYEAAQIEVFGEMALKGYIYRGLKPVHWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH S+SIY  F +     +   +L E+   LG+A+WTTTPWT+P N AVA+N  L
Sbjct: 203 LEYPEGHTSQSIYVSFPITELSDTAKEILGEYADSLGVAIWTTTPWTLPGNLAVAINPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVVE       D    A K              ++IVA DL  TL   + + L IK +
Sbjct: 263 EYAVVET------DGTLCAQK--------------YLIVAKDLAETLTETFESALSIKGS 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+ +E C Y HP+ +R+ PVV GGDYITTESGTGLVHTAPGHGQEDY+T  KYGLP+L
Sbjct: 303 FKGNVIEQCTYQHPLFDRKSPVVAGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLPLL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD EG  T EAG+F+GL+VL   N  +++ L  + +L+ EE Y+HKYPYDWRTKKPTI
Sbjct: 363 SPVDAEGTLTTEAGEFAGLNVLNGANDKIIEALKGKQALLKEEAYQHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 423 FRATEQWFASVEGFRDQALAAIKDVQWIPAQ 453



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 162/350 (46%), Positives = 225/350 (64%), Gaps = 32/350 (9%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGN+HD+    N
Sbjct: 632 KKEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKN 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+Y+DL  +D+Y L Q  N+  ++ E++ES+QFFK FQ +Q F +VDLSNFY D AKDR
Sbjct: 692 AIAYEDLAELDKYILHQASNVFSDVTEAFESFQFFKFFQKVQNFCVVDLSNFYLDAAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T S  RRSCQTV++  L  + + IAP+L H+AED+WQNLP+       ++ + VF
Sbjct: 752 LYISDTDSPRRRSCQTVIALILEMLTKAIAPVLCHMAEDIWQNLPYE------TSEKSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
            S W  LDE+W +    E  F  W ++ E+R  VN+VLE ART K+IG+SLEAKV +   
Sbjct: 806 ASGWYKLDEQWAS---DEELFQKWEQLREIRNGVNQVLEKARTEKMIGASLEAKVLMRDV 862

Query: 570 DASLASRL-----REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY----- 619
           D  L   L     +E     +  D L+ + ++SQVE +  T +        S +Y     
Sbjct: 863 DGKLTDWLTALNPKESLNDGNRVDELRYLLLVSQVEFVTETLD--------SEQYQDTIE 914

Query: 620 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           L +G  K+ + V +A+G KC+RCWNYST VGSF + PT+C RC E L  +
Sbjct: 915 LADG--KLQVAVQKADGEKCDRCWNYSTSVGSFADDPTICDRCNEALVAK 962


>gi|428320457|ref|YP_007118339.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
 gi|428244137|gb|AFZ09923.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
          Length = 1196

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 234/331 (70%), Gaps = 19/331 (5%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 142 SFQRYGVWGDWKHPYLTLKPEYEAAQIGVFGQMVLKGYIYRGFKPVHWSPSSKTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIY  F +     S    L  ++P L  A+WTTTPWT+PAN A+AVN +L
Sbjct: 202 LEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAIWTTTPWTIPANLAIAVNPEL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE           PAN             + F++VA D V  L A + T+L I  T
Sbjct: 262 TYAVVE----------PPANSHI---------AQQFMLVAVDAVDRLSATFNTELKILAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE C Y HP+ +R+ P+V GGDYIT +SGTGLVHTAPGHGQED++   + GLP+L
Sbjct: 303 FKGKELEGCIYKHPLFDRESPIVAGGDYITADSGTGLVHTAPGHGQEDFIVGKRCGLPVL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD+ G FT EAG+F+GL+VLG+GN AV+  L E   LI EE Y H YPYDWRTKKPTI
Sbjct: 363 TPVDENGNFTAEAGQFAGLNVLGNGNAAVIDALAEANCLIKEESYAHSYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 423 FRATEQWFASVEGFRDEALKAIADVNWIPAQ 453



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 163/244 (66%), Gaps = 9/244 (3%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGADVLRLWVSSVDY+ DV +G  +L+Q SD+YRK+R T ++LLGNLHD+    ++++ +
Sbjct: 628 YGADVLRLWVSSVDYSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVACE 687

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +LP +D+Y L ++  +   +++++ES+QF + FQ +Q F  VDLSNFY D+AKDRLY   
Sbjct: 688 ELPELDRYMLHRMGEVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISA 747

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           T +  RRSCQTV++  + ++ R IAP+L H+AED+WQ LP+       +  + VFE+ W 
Sbjct: 748 TDTRRRRSCQTVIAIAVENLARAIAPVLCHMAEDIWQYLPYP------TPYKSVFEAGWV 801

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            +D  W    +     W  + ++R EVNKVLE AR  K IGSSLEAKV L+  D     +
Sbjct: 802 QIDASWHNPELAA--RWQYLRQVRGEVNKVLEKARIEKAIGSSLEAKVLLYVPDVEKREQ 859

Query: 577 LREM 580
           L+ +
Sbjct: 860 LQAL 863



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 7/75 (9%)

Query: 588  DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYST 647
            D L+ +FI S+VE++ S  N +++ +PYS +       ++ IGV +A+G KC+RCWNYST
Sbjct: 1121 DELRYLFITSEVELVES--NAIMQELPYSYQ-----SPELAIGVVKADGEKCDRCWNYST 1173

Query: 648  QVGSFVEHPTLCSRC 662
             VG  +EHP +C RC
Sbjct: 1174 HVGESIEHPLICERC 1188


>gi|443326538|ref|ZP_21055189.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
 gi|442793860|gb|ELS03296.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
          Length = 959

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/338 (60%), Positives = 233/338 (68%), Gaps = 33/338 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           +  FKRYG+W DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSSRTALAE
Sbjct: 141 LEGFKRYGIWGDWENPYLTLTPEYEAAQIAVFGEMALKGYIYRGLKPVHWSPSSRTALAE 200

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEYPEGH S SIYA F ++S       L  ++LP+L +A+WTTTPWT+P N AVAVN 
Sbjct: 201 AELEYPEGHTSPSIYAAFPVISLGDKAQEL-EQYLPNLAVAIWTTTPWTIPGNLAVAVNG 259

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L+YAV E                              IIVA DLV  L   + T L IK
Sbjct: 260 DLEYAVAETSG-------------------------KHIIVAKDLVEQLATTFETDLTIK 294

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T+ G  LE   Y HP+ +R   VVIGGDYITTESGTGLVHTAPGHGQEDY+T  KYGLP
Sbjct: 295 TTVLGKVLEGITYHHPLFDRDSKVVIGGDYITTESGTGLVHTAPGHGQEDYITGQKYGLP 354

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGD-------GNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           ILSPVDD GKFTEEAG F+GL V+         GN A++  L E  +L+  E Y HKYPY
Sbjct: 355 ILSPVDDSGKFTEEAGNFAGLQVVAKGNEKVSAGNQAIIDALQEAGTLLKHEEYAHKYPY 414

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWRTKKPTIFRATEQWFASVEGFR AA+DAI  V W+P
Sbjct: 415 DWRTKKPTIFRATEQWFASVEGFRDAALDAIKSVTWIP 452



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/339 (46%), Positives = 216/339 (63%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +++Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVRIGAGIVKQLGDIYRKIRNTSRFLLGNLHDFDPKKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP +D+Y L ++  +   I ++YESYQF++ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVAYEDLPELDKYMLHRITEVFAEITDAYESYQFYRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY  G  SF RRSCQTVL+  + ++ + IAP+L H+AED+WQ+LP+       +    VF
Sbjct: 752 LYISGLGSFRRRSCQTVLAIAVENLAKAIAPVLCHMAEDIWQSLPYE------TGYNSVF 805

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +S W   D  W+   + E  FW +I  LR EVNKV+E AR  K+IGSSL+AKV L   D 
Sbjct: 806 QSGWLETDASWQNPELVE--FWQEIRNLRDEVNKVMEEARKDKVIGSSLDAKVLLVLADD 863

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L ++L  +           D L+  F+ SQVE++ S     I    Y  +      DKV
Sbjct: 864 ELKAKLAALNPTNSLNAKSVDELRYFFLASQVELVDSI--DAITKAEYKSQ-----SDKV 916

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I +  A+G KC+RCWNYST VG F + PT+C RC   L
Sbjct: 917 SIAIVNADGKKCDRCWNYSTTVGEFKDDPTICDRCNSAL 955


>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782385|sp|B8HMX3.1|SYI_CYAP4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 955

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/331 (61%), Positives = 243/331 (73%), Gaps = 26/331 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW +W+NPYLTL PEYEAAQI VFGQM L+GYIYRG KPV+WSPSS+TALAEAE
Sbjct: 143 SFKRYGVWGEWDNPYLTLKPEYEAAQIGVFGQMVLKGYIYRGLKPVYWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIY  F + S   +   +L ++LP+L +A+WTTTPWT+P N AVA+N  L
Sbjct: 203 LEYPEGHTSRSIYVSFALTSLSATAEAVLKDYLPNLKVAIWTTTPWTIPGNLAVALNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE                       KD    +++VA++LV  LE   G  L IK T
Sbjct: 263 TYAVVE-----------------------KDGS--YLLVANELVERLETTLGVSLPIKTT 297

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           +AG  LE+  Y HP+ +RQ P+V+G DY+TT+SGTGLVHTAPGHGQEDYV    YGLPIL
Sbjct: 298 IAGQALEHSTYQHPLFDRQGPLVMG-DYVTTDSGTGLVHTAPGHGQEDYVVGQHYGLPIL 356

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G+FTEEAG+F+GL VL +GN AV++ L +  +L+ EE Y HKYPYDWRTKKP I
Sbjct: 357 SPVDGNGRFTEEAGQFAGLKVLDEGNEAVIQALQQVGALLKEEAYSHKYPYDWRTKKPVI 416

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
            RATEQWFASVEGFR+AA+ AI QV+W+P Q
Sbjct: 417 LRATEQWFASVEGFREAALQAIAQVQWIPAQ 447



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 208/339 (61%), Gaps = 16/339 (4%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           +E P YGAD+LRLWVSSVDY+ DV +G  +L+QM+DIYRK+R T R+LLGNLHD+    N
Sbjct: 626 KEDPPYGADILRLWVSSVDYSSDVPLGKNILKQMADIYRKIRNTARFLLGNLHDFDPANN 685

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            + YD LP +D+Y L ++  +   + E++ SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 KVEYDRLPQLDRYMLHRIVEVFTEVNEAFTSYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY      F RRSCQTVL   L ++ + IAP++PHLAED+WQ LP+       +  + VF
Sbjct: 746 LYISAPDDFRRRSCQTVLWIALENLAKAIAPVVPHLAEDIWQFLPYP------TPYKSVF 799

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  LD  W       +  + ++  LR +VN+ LE  R  K+IG+SLEAKV L+  D 
Sbjct: 800 EAGWVSLDATWTNPDPQLLETFEQVRLLRFKVNECLEKLRVNKVIGASLEAKVLLYIADP 859

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
               + + +      A    D L+  F+ SQVE+L ++P+ L        EY  E  D  
Sbjct: 860 EKRQQWQNLNPPALAAISGVDELRYFFLTSQVELL-NSPDQLSE---LKSEYRFEFGDSS 915

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             GV  A+G KC+RCWNYST VG   +H  LC RC  V+
Sbjct: 916 G-GVLPADGQKCDRCWNYSTYVGKDDKHLLLCERCVAVM 953


>gi|67921387|ref|ZP_00514905.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67856499|gb|EAM51740.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 940

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR+GVW +W +PYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 124 AFKRFGVWGNWEHPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAE 183

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSI+A F ++         L  FL +LG+A+WTTTPWT+P N AVA+N  L
Sbjct: 184 LEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLAVALNPDL 243

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE  S    D+                 K  ++IVA+DLV  L   + T+L +K T
Sbjct: 244 NYAVVEQNS----DAC----------------KYQYLIVAADLVERLSTTFETELTVKAT 283

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL +L
Sbjct: 284 LPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLGVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEAG+F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKKPTI
Sbjct: 344 SPVDAKGNFTEEAGQFAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKPTI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR AA+ AI  V WVP Q
Sbjct: 404 FRATEQWFASVEGFRDAALTAIKTVNWVPSQ 434



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 149/339 (43%), Positives = 218/339 (64%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD++RLWVSSVDY+ D+ IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADLVRLWVSSVDYSSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQH 672

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY++LP +D+Y L ++  +   + +++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 733 LYISHLESIRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 786

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W    ++W    +G    W KI E+R EVN  LE+AR  K IGSSL+AKV L+  + 
Sbjct: 787 EAGWLKTSKQWENPELGAS--WTKIREIRNEVNNALELARKEKAIGSSLDAKVLLYIPEQ 844

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L +   A     +  D L+   + SQVE++ S  +  I+   Y  E      + V
Sbjct: 845 ELRQKLEKFNPADSLSGNKVDELRYFVLASQVELVDSLDS--IKQADYQSE-----SELV 897

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC + L
Sbjct: 898 SVGVIKAEGEKCDRCWNYSTKVGEFKDDPTICERCNDAL 936


>gi|416383684|ref|ZP_11684493.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
 gi|357265205|gb|EHJ13999.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
          Length = 940

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR+GVW +W +PYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 124 AFKRFGVWGNWEHPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAE 183

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSI+A F ++         L  FL +LG+A+WTTTPWT+P N AVA+N  L
Sbjct: 184 LEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLAVALNPDL 243

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE  S    D+                 K  ++IVA+DLV  L   + T+L +K T
Sbjct: 244 NYAVVEQNS----DAC----------------KYQYLIVAADLVERLSTTFETELTVKAT 283

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL +L
Sbjct: 284 LPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGLGVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEAG+F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKKPTI
Sbjct: 344 SPVDAKGNFTEEAGQFAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKKPTI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR AA+ AI  V WVP Q
Sbjct: 404 FRATEQWFASVEGFRDAALTAIKTVNWVPSQ 434



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 148/339 (43%), Positives = 217/339 (64%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD++RLWVSSVDY+ D+ IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADLVRLWVSSVDYSSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQH 672

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY++LP +D+Y L ++  +   + +++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ  P+       +  + VF
Sbjct: 733 LYISHLESIRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFFPYE------TPYKSVF 786

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W    ++W    +G    W KI E+R EVN  LE+AR  K IGSSL+AKV L+  + 
Sbjct: 787 EAGWVKTSKQWENPELGAS--WTKIREIRNEVNNALELARKEKAIGSSLDAKVLLYIPEQ 844

Query: 572 SLASRLREMCTAK----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L +   A     +  D L+   + SQVE++ S  +  I+   Y  E      + V
Sbjct: 845 ELRQKLEKFNPADSLSGNKVDELRYFVLASQVELVDSLDS--IKQADYQSE-----SELV 897

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV +AEG KC+RCWNYST+VG F + PT+C RC + L
Sbjct: 898 SVGVIKAEGEKCDRCWNYSTKVGEFKDDPTICERCNDAL 936


>gi|284928634|ref|YP_003421156.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809093|gb|ADB94798.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 960

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/331 (60%), Positives = 238/331 (71%), Gaps = 20/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+R GVW DW+NPYLT+ PEYEAAQI VF  M  +GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 143 SFQRLGVWGDWHNPYLTMLPEYEAAQIGVFWNMFNKGYIYRGLKPVHWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRSIY  F + +A    +G+L +FL DLG+ +WTTTPWT+PAN AVAVN  +
Sbjct: 203 LEYPEGHVSRSIYTAFSVTNASQEITGILKDFLSDLGVVIWTTTPWTIPANLAVAVNPVI 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y+VVE                 +   V K +   ++IVA DLV  L   + T L I+ T
Sbjct: 263 KYSVVE-----------------QTTGVCKHK---YLIVAEDLVDKLSQVFETSLKIRAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G+ LEN  Y H + +R+C +VIGGDYI T SGTGLVHTAPGHGQEDY+   KYGL IL
Sbjct: 303 FSGNLLENTIYRHSLFDRECKIVIGGDYINTSSGTGLVHTAPGHGQEDYLVGQKYGLEIL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD++G  TEEAG F+GL+VL D N  ++  L E+  LI EE YEHKYPYDWRTKKPTI
Sbjct: 363 SPVDNKGILTEEAGPFAGLNVLKDANEVIINRLKEEKVLIKEELYEHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 423 FRATEQWFASVEGFRAHAISAIKNVNWIPSQ 453



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 215/342 (62%), Gaps = 23/342 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV++G  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADVLRLWVSSVDYSSDVLVGETILKQISDVYRKIRNTARFLLGNLHDFDPQKD 691

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++SY+ LP +D+Y L ++  + K + +++E++ F   +Q IQ F IVDLSNFY D+AKDR
Sbjct: 692 TVSYEKLPELDRYMLNRIAEVSKEVTKAFETFHFSNFYQAIQNFCIVDLSNFYLDIAKDR 751

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTVL   + ++  +IAP+L H+AED+WQ+     +         VF
Sbjct: 752 LYISSPNSFRRRSCQTVLFLAIKNLSTMIAPVLSHMAEDIWQHSSCKLSYNS------VF 805

Query: 512 ESKWPVLDEKWRTFPVGEI-YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
           E  W    +K +     E+  FW  +  +R ++N VLE+AR  K+IGSSL+AK+ L   D
Sbjct: 806 EGGWV---DKIQELDQPELKTFWVNLRLIRNDINNVLELARQNKVIGSSLDAKIILHIKD 862

Query: 571 ASLASRLREMCTAK-----HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
                +L +  +       +  D L+  F++S+VE++       I+++ Y  E      +
Sbjct: 863 VKFKQQLMKFDSQDTFLQGNCVDELRYFFLVSRVELIEDLDQ--IKSLKYQSE-----SE 915

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             +IGV +AEG KC+RCWNYST VG F++ PT+C RC+  ++
Sbjct: 916 LFYIGVVKAEGEKCDRCWNYSTTVGDFIDDPTICDRCHSAIS 957


>gi|84029572|sp|Q8DGI7.2|SYI_THEEB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
          Length = 953

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 237/331 (71%), Gaps = 21/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW DW +PYLTL P+YEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 144 SFQRYGVWGDWAHPYLTLTPDYEAAQIGVFGEMVLRGYIYRGLKPVHWSPSSKTALAEAE 203

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YA F ++  P   +      L  LG+A+WTTTPWT+PAN AV+VN  L
Sbjct: 204 LEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTTPWTIPANLAVSVNPDL 263

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YA+VE+Q                       ++   +IVA DLV  L    G  L +  T
Sbjct: 264 TYALVEVQP---------------------SERYKHLIVAKDLVERLSDTLGRTLKVVAT 302

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+DLE+ RY HP+  R+  ++IGGDY+TTESGTGLVHTAPGHG EDY    +YGLPIL
Sbjct: 303 AKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPIL 362

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD+ G FT EAG F+GL+VL +GN AV+  L E  +L+ EEPY HKYPYDWRTKKPTI
Sbjct: 363 SPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKPTI 422

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR AA+ AI +VKW+P Q
Sbjct: 423 FRATEQWFASVEGFRDAALRAIAEVKWIPAQ 453



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/339 (48%), Positives = 217/339 (64%), Gaps = 21/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY  DV IG  +LRQ++D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQDPPYGADVLRLWVSSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQD 686

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I Y  LP +D+Y L +L  +   +  +++S+QF++ FQ IQ   +VDLSNFY D+AKDR
Sbjct: 687 MIPYAQLPALDRYMLHRLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDR 746

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    T   RRSCQTVL+  L ++ R IAP+LPHLAED+WQ+LPF       +    VF
Sbjct: 747 LYISAATGDRRRSCQTVLAIALQNLARAIAPVLPHLAEDIWQHLPFK------TPYLSVF 800

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +S W  L  +W+   +     W ++ +LR EVNKVLE AR  KLIGSSLEAKV+L+  D+
Sbjct: 801 QSGWVQLSAQWQDNALAA--EWQRLRQLRLEVNKVLEKARAEKLIGSSLEAKVWLYVADS 858

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
               RL +M      + +  D L+ +F++SQVE++P  P  +  ++PY  E   EG   +
Sbjct: 859 EWRDRLAQMNPRDALSGNGVDELRYLFLVSQVELMPQ-PQAV--DVPYVLE--AEG---L 910

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           WIGV  A+G KC RCWNYS  VG    HP LC RC   L
Sbjct: 911 WIGVGHAQGEKCVRCWNYSESVGQSALHPQLCDRCQAAL 949


>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 981

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 237/331 (71%), Gaps = 21/331 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW DW +PYLTL P+YEAAQI VFG+M L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 172 SFQRYGVWGDWAHPYLTLTPDYEAAQIGVFGEMVLRGYIYRGLKPVHWSPSSKTALAEAE 231

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YA F ++  P   +      L  LG+A+WTTTPWT+PAN AV+VN  L
Sbjct: 232 LEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTTPWTIPANLAVSVNPDL 291

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YA+VE+Q                       ++   +IVA DLV  L    G  L +  T
Sbjct: 292 TYALVEVQP---------------------SERYKHLIVAKDLVERLSDTLGRTLKVVAT 330

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+DLE+ RY HP+  R+  ++IGGDY+TTESGTGLVHTAPGHG EDY    +YGLPIL
Sbjct: 331 AKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGHGLEDYGVGQRYGLPIL 390

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD+ G FT EAG F+GL+VL +GN AV+  L E  +L+ EEPY HKYPYDWRTKKPTI
Sbjct: 391 SPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEPYVHKYPYDWRTKKPTI 450

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           FRATEQWFASVEGFR AA+ AI +VKW+P Q
Sbjct: 451 FRATEQWFASVEGFRDAALRAIAEVKWIPAQ 481



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/339 (48%), Positives = 217/339 (64%), Gaps = 21/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY  DV IG  +LRQ++D+YRK+R T R+LLGNLHD+    +
Sbjct: 655 KQDPPYGADVLRLWVSSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQD 714

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I Y  LP +D+Y L +L  +   +  +++S+QF++ FQ IQ   +VDLSNFY D+AKDR
Sbjct: 715 MIPYAQLPALDRYMLHRLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDR 774

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    T   RRSCQTVL+  L ++ R IAP+LPHLAED+WQ+LPF       +    VF
Sbjct: 775 LYISAATGDRRRSCQTVLAIALQNLARAIAPVLPHLAEDIWQHLPFK------TPYLSVF 828

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +S W  L  +W+   +     W ++ +LR EVNKVLE AR  KLIGSSLEAKV+L+  D+
Sbjct: 829 QSGWVQLSAQWQDNALAA--EWQRLRQLRLEVNKVLEKARAEKLIGSSLEAKVWLYVADS 886

Query: 572 SLASRLREM----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
               RL +M      + +  D L+ +F++SQVE++P  P  +  ++PY  E   EG   +
Sbjct: 887 EWRDRLAQMNPRDALSGNGVDELRYLFLVSQVELMPQ-PQAV--DVPYVLE--AEG---L 938

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           WIGV  A+G KC RCWNYS  VG    HP LC RC   L
Sbjct: 939 WIGVGHAQGEKCVRCWNYSESVGQSALHPQLCDRCQAAL 977


>gi|427420559|ref|ZP_18910742.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
 gi|425756436|gb|EKU97290.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
          Length = 971

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/336 (58%), Positives = 233/336 (69%), Gaps = 27/336 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+GVW +W  PY+TL PEYEAAQ++VFGQM L+GYIYRG K VHWSPSS+TALAEAEL
Sbjct: 149 FRRFGVWGNWEKPYMTLQPEYEAAQLDVFGQMVLKGYIYRGLKSVHWSPSSQTALAEAEL 208

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S SIY  F MVSA  +    L+ +L +LG+A+WTTTPWT+PAN AVAVN+ L 
Sbjct: 209 EYPEGHTSPSIYVGFPMVSASDTAEKALSPYLDNLGVAIWTTTPWTIPANVAVAVNSDLV 268

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VVE+ S       AP                 ++IV  DLV TL   + T L  K  +
Sbjct: 269 YTVVEVAS------GAPYK---------------YLIVGKDLVETLANVFETDLTPKVDI 307

Query: 184 AGSDLENCRYVHPVD------NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            G+DL    Y HP+       NR+ P+VIGGDYITTESGTGLVHTAPGHG ED+    KY
Sbjct: 308 NGADLAGSTYHHPLHSKEDTFNRESPIVIGGDYITTESGTGLVHTAPGHGMEDFGVGQKY 367

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           GLPIL PVD+ G FT EAG F GL+VL   N A++K L E  +L+  EPY HKYPYDWRT
Sbjct: 368 GLPILCPVDERGNFTAEAGSFEGLNVLKTANEALIKALTEANTLLKHEPYVHKYPYDWRT 427

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           KKPTIFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 428 KKPTIFRATEQWFASVEGFRDEALKAISDVQWIPAQ 463



 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 22/341 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGNL+D+    +
Sbjct: 642 KQDPPYGADVLRLWVSSVDYSSDVPIGKNILKQLADVYRKIRNTSRFLLGNLYDFDPAKD 701

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ YD +P +DQY L ++  I   +  ++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 702 AVPYDQMPSLDQYMLHRMTEIFAEVESAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 761

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  L ++ + IAP+L H+AED+WQ +P+    E G+ +  VF
Sbjct: 762 LYISDAVSQRRRSCQTVLAVALENLAKSIAPVLCHMAEDIWQFMPY----ETGTKS--VF 815

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ W  +D +W+   + +   W ++ ELR EVN+VLE AR+ K IGSSL+AK  ++  DA
Sbjct: 816 EAGWLKIDPQWKKPELADT--WNQLRELRDEVNQVLEQARSAKDIGSSLQAKALIYVADA 873

Query: 572 SLASRLREM------CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
            L  RL+ M             D ++ + ++SQVE+L S  +GL ++I Y  E      D
Sbjct: 874 QLRERLKAMNPSDAVAAGSSHVDEVRYLLLVSQVEILDSA-DGL-KDIKYRSE-----SD 926

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              IG+  A+G KC+RCWNYST VG   EH T+C RC E L
Sbjct: 927 AFGIGIVDADGEKCDRCWNYSTHVGESAEHETICERCVEAL 967


>gi|56751678|ref|YP_172379.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301246|ref|YP_401454.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820600|sp|Q5N1G1.1|SYI_SYNP6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56686637|dbj|BAD79859.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170127|gb|ABB58467.1| Isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 954

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/332 (58%), Positives = 236/332 (71%), Gaps = 27/332 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVWADW+ PYLTL PEYEAAQI+VFGQM L+GYIYRG KPVHWSPSSRTALAEAE
Sbjct: 143 SFQRYGVWADWDAPYLTLTPEYEAAQIDVFGQMVLKGYIYRGLKPVHWSPSSRTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYP+GH SRSIY    +V    +   LL  +  +L LA+WTTTPWT+PAN AVAVN +L
Sbjct: 203 LEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNY-ANLALAIWTTTPWTIPANLAVAVNGEL 261

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV+      GD                      +IVA++L  +L   + T+L +  T
Sbjct: 262 TYAVVQA-----GD--------------------CHLIVAAELAESLSKTFATELTVLAT 296

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS LE+ RY HP+ +R+ PVVIGGDYITTESGTGLVHTAPGHGQ+D++   +YGL + 
Sbjct: 297 FPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHTAPGHGQDDFIVGNRYGLEVF 356

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G FT   G +  G +VL D N AV+++L E  +L+ EE Y H+YPYDWRTKKPT
Sbjct: 357 CPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPT 416

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           IFRATEQWFASVEGFR+ A+ AI +V W+P Q
Sbjct: 417 IFRATEQWFASVEGFREQALQAIAEVDWIPAQ 448



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 217/340 (63%), Gaps = 22/340 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQMADVYRKIRNTARFLLGNLHDFDPAKD 686

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ ++ LP +D+Y L +L  ++  I++++ES+QFF+ FQ +Q F +VDLSNFY D+ KDR
Sbjct: 687 ALPWEKLPELDRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDR 746

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  + ++   IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 747 LYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYP------ARTKSVF 800

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD- 570
           ++ W  L + W    +     W ++ +LR+EVNKVLE AR  + IGSSLEAK+ L+  D 
Sbjct: 801 QAGWVQLQDDWNQPELAAK--WQQLRDLRSEVNKVLEQARRDQAIGSSLEAKLQLWVADS 858

Query: 571 ---ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
              A+LA R      +    D L+ +F++SQVE L   P GL        +Y  + +D  
Sbjct: 859 DWRAALADRNPADSLSGTAVDDLRYLFLVSQVE-LRDQPTGLT-----EAKYHAQTED-- 910

Query: 628 W-IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           W I V  AEG KC+RCWNYST VG   EHP LC RC   L
Sbjct: 911 WAIAVVDAEGQKCDRCWNYSTTVGQSSEHPDLCDRCVSAL 950


>gi|359459207|ref|ZP_09247770.1| isoleucyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
          Length = 970

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/331 (58%), Positives = 233/331 (70%), Gaps = 26/331 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW +W NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPV+WSPSS+TALAEAE
Sbjct: 143 SFQRYGVWGNWENPYLTLKPEYEAAQIGVFGKMALKGYIYRGFKPVYWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIY  F++     +   LL+E+LP L +A+WTTTPWT+P N AV++N  L
Sbjct: 203 LEYPEGHTSRSIYVTFKVTGLSEAAQPLLDEYLPTLKVAIWTTTPWTIPGNLAVSLNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV+                           + ++IVA DLV TL     +   I KT
Sbjct: 263 TYAVVKA-------------------------GEDYLIVAEDLVETLTETLESSFKIIKT 297

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LEN  Y HP+  R+ P+V+ GDY+TTESGTGLVHTAPGHGQEDY    +YGL +L
Sbjct: 298 LPGKALENSTYQHPLFEREGPLVL-GDYVTTESGTGLVHTAPGHGQEDYQVGQQYGLAML 356

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FT+EAG F+GL+VL  GN AV++ L    +L+ EE Y HKYPYDWRTKKP I
Sbjct: 357 SPVDGDGTFTDEAGPFAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKPVI 416

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
            RATEQWFASV+GFR+A +DAI  V W+P Q
Sbjct: 417 LRATEQWFASVDGFREAVLDAIATVNWIPAQ 447



 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 157/342 (45%), Positives = 223/342 (65%), Gaps = 20/342 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY  DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQDPPYGADVLRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQD 685

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D AKDR
Sbjct: 686 AVNYEDLPQLDRYMLHRITEVFTDVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDTAKDR 745

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL+  L ++ R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 746 LYISEPNNPRRRSCQTVLAIALENLARAIAPVLSHMAEDIWQSLPYQ------TEHQSVF 799

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W  L+++W+   +     W  + E+R EVNKVLE AR  K IGSSLE+KV L+  D 
Sbjct: 800 ASGWMHLEDQWQNPDLAS--HWVVLREIRQEVNKVLEQARVEKQIGSSLESKVLLYVSDT 857

Query: 572 SLASRLREMCTA----KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L  M  A     ++ D L+ +F+ SQVE+L  TP  L R + Y  +      + +
Sbjct: 858 DLRQQLAAMNPATGAGSNNVDELRYLFLASQVELL-DTPKKLDR-LMYQFQ-----SETI 910

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
            +GV +A+G KC+RCWNYST VG   +HP LC RC  ++  Q
Sbjct: 911 GVGVVKADGQKCDRCWNYSTYVGQSKKHPLLCDRCEPIIENQ 952


>gi|158337034|ref|YP_001518209.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082318|sp|B0C872.1|SYI_ACAM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|158307275|gb|ABW28892.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 971

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/331 (57%), Positives = 233/331 (70%), Gaps = 26/331 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVW +W NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPV+WSPSS+TALAEAE
Sbjct: 143 SFQRYGVWGNWENPYLTLKPEYEAAQIGVFGKMALKGYIYRGFKPVYWSPSSQTALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRSIY  F++     +   LL+E+LP L +A+WTTTPWT+P N AV++N  L
Sbjct: 203 LEYPEGHTSRSIYVTFKVTGLSETAQPLLDEYLPTLKVAIWTTTPWTIPGNLAVSLNPDL 262

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV+                           + ++IVA DLV TL     +   + KT
Sbjct: 263 TYAVVKA-------------------------GEDYLIVAEDLVETLTETLESSFKVIKT 297

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LEN  Y HP+  R+ P+V+ GDY+TTESGTGLVHTAPGHGQEDY    +YGL +L
Sbjct: 298 LPGKALENSTYQHPLFEREGPLVL-GDYVTTESGTGLVHTAPGHGQEDYQVGQQYGLAML 356

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FT+EAG F+GL+VL  GN AV++ L    +L+ EE Y HKYPYDWRTKKP I
Sbjct: 357 SPVDGDGTFTDEAGPFAGLNVLNGGNEAVIEALQSAGALLKEESYAHKYPYDWRTKKPVI 416

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
            RATEQWFASV+GFR+A +DAI  V W+P Q
Sbjct: 417 LRATEQWFASVDGFREAVLDAIATVNWIPAQ 447



 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 158/339 (46%), Positives = 221/339 (65%), Gaps = 20/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY  DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQDPPYGADVLRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQD 685

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y+DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 AVAYEDLPQLDRYMLHRITEVFTDVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     +  RRSCQTVL+  L ++ R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 746 LYISEPNAQRRRSCQTVLAIALENLARAIAPVLSHMAEDIWQSLPYE------TEHQSVF 799

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S W  L+++W    +     W  + E+R EVNKVLE ART K IGSSLEAKV L+  D 
Sbjct: 800 ASGWMRLEDQWHNPDLAS--HWIVLREIRQEVNKVLEQARTEKEIGSSLEAKVLLYVSDT 857

Query: 572 SLASRLREMCTA----KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            L  +L  M  +     ++ D L+ +F+ SQVE+L  TP  L R + Y  +    G    
Sbjct: 858 DLRQQLDAMNPSTGGGSNNVDELRYLFLASQVELL-ETPKNLDR-LMYQFQSETLG---- 911

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +GV  A+G KC+RCWNYST VG   +HP LC RC  ++
Sbjct: 912 -VGVVTADGKKCDRCWNYSTYVGRSKQHPLLCDRCEPII 949


>gi|443316714|ref|ZP_21046148.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
 gi|442783681|gb|ELR93587.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
          Length = 986

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/340 (57%), Positives = 234/340 (68%), Gaps = 29/340 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKRYGVW DW+ PY+TL PEYEAAQI VFGQM L+GYIYRG K VHWSP+S+TALAEA
Sbjct: 160 AGFKRYGVWGDWDTPYMTLQPEYEAAQIGVFGQMYLKGYIYRGLKSVHWSPTSQTALAEA 219

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGH S SIYA F +V A  +    L  +  +LG+A+WTTTPWT+PAN AVAVN  
Sbjct: 220 ELEYPEGHTSPSIYAAFPLVEASAAAKATLAPYGENLGVAIWTTTPWTIPANLAVAVNGD 279

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L YAVV +           A+ K  P          ++++A DL   L    GT+L +K 
Sbjct: 280 LTYAVVAV-----------ASGKPFP----------YLLIAKDLCDRLSQVLGTELTLKA 318

Query: 182 TLAGSDLENCRYVHPVDNR--------QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
            L GSDLE C Y HP+ ++          PV++GGDYITTESGTGLVHTAPGHGQED+  
Sbjct: 319 ELKGSDLEGCTYRHPLQDQLPTDKRGETSPVIVGGDYITTESGTGLVHTAPGHGQEDFQV 378

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
             +YGL +L PVD+ G  T EAG F+GL+VL D N AV++ L    SL+ +EPY HKYPY
Sbjct: 379 GQRYGLSVLCPVDERGDMTAEAGPFAGLNVLKDANPAVIEALQTAGSLLKQEPYVHKYPY 438

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           DWRTKKPTIFRATEQWFASV GFR  AM AI  V+W+P Q
Sbjct: 439 DWRTKKPTIFRATEQWFASVAGFRDEAMAAIRSVQWIPAQ 478



 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/342 (46%), Positives = 222/342 (64%), Gaps = 22/342 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLW SSVDY+ DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    N
Sbjct: 657 KQDPPYGADVLRLWASSVDYSSDVPLGSNILKQMADVYRKIRNTARFLLGNLHDFDPAQN 716

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y DLP +D+Y L ++  +   +++++++YQFF+ FQ IQ F +VDLSNFY D AKDR
Sbjct: 717 AVAYGDLPELDRYMLHRMTEVFAEVKDAFDTYQFFRFFQTIQNFCVVDLSNFYLDTAKDR 776

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY  G  S  RRSCQTVL+  + ++ R +AP+L H+AED+WQNLP+       ++   VF
Sbjct: 777 LYISGADSPRRRSCQTVLAIAIENLARAVAPVLSHMAEDIWQNLPYP------TSHTSVF 830

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +S W  ++ +W    +     W  +  LR  VN+VLE AR+GK IGSSLEAKV L+T+D 
Sbjct: 831 QSGWVEMEAQWVNPDLASP--WQHLRTLRQGVNQVLEQARSGKAIGSSLEAKVRLYTEDE 888

Query: 572 SLASRLREM------CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           +L SRL  +          +  D L+ +F++SQVE+L S P  L   + +SGE       
Sbjct: 889 TLRSRLDSLNPGDAIALGNNHVDELRYLFLVSQVEILDS-PEALT-GLKFSGE-----SA 941

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            V IGV  A G KC+RCWNYST VG   EHP +C RC   L+
Sbjct: 942 GVQIGVVDAVGQKCDRCWNYSTHVGDSAEHPQICDRCTAALS 983


>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 936

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/338 (58%), Positives = 238/338 (70%), Gaps = 31/338 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ASF+R GVW DW+ PYLTL PEYEAAQIEVFGQM+L+GYIYRG KPVHWSPSS+TALAEA
Sbjct: 138 ASFQRLGVWGDWDRPYLTLSPEYEAAQIEVFGQMALKGYIYRGLKPVHWSPSSQTALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYP+ H+S SIY  F + S  P+   +L  FLP L  A+WTTTPWT+PAN A+  N K
Sbjct: 198 ELEYPDNHISPSIYVAFPLQSLSPAAQPILEPFLPGLRAAIWTTTPWTIPANLALCFNPK 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L YAVVE                 R G          +++A+DL   LE    T L +K 
Sbjct: 258 LTYAVVE---------------SPRFG---------LLLIAADLRQRLEKVLETPLEVKA 293

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL GS LE C+  HP+ +R    V+ GDY+TTESGTG+VHTAPGHG+ED+ T  KYGLPI
Sbjct: 294 TLPGSALEYCQGRHPLFDRSSLCVL-GDYVTTESGTGIVHTAPGHGEEDFKTGQKYGLPI 352

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLG-----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           LSPVD++G+FT EAG +F GLDVL       GN+AV+K L    +L+ EEPY HKYPYDW
Sbjct: 353 LSPVDEQGRFTAEAGSQFVGLDVLSKEPETSGNLAVIKALRAVGALLKEEPYNHKYPYDW 412

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           RTK+PTIFRATEQWFASV GFR+ A+ AI  VKW+PP+
Sbjct: 413 RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPPE 450



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 205/337 (60%), Gaps = 31/337 (9%)

Query: 332 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VG 390
           PQ  P YGADVLRLWVSSVDY+GDV IG  +L QM+D+YRK+R T R+LL NL+D+    
Sbjct: 627 PQTDPAYGADVLRLWVSSVDYSGDVPIGKTILGQMADVYRKIRNTARFLLSNLYDFNPAQ 686

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +++ ++ L  +D+Y L +L+ +   I ES+E+YQF++ FQ +Q F +VDLSNFY D+ KD
Sbjct: 687 DAVPFEALTELDRYILHRLQEVGAEITESFENYQFYRFFQAVQNFCVVDLSNFYLDIGKD 746

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RR CQTVLS  L ++ + IAP+L HLAE++W  LP+            V
Sbjct: 747 RLYISHARSLRRRQCQTVLSLVLENLAKAIAPVLSHLAEEIWSYLPYP------KPTRSV 800

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
           FE  W  L E+WR   +     W K+  +R EVNK LE ART K+IG+S EAK+ L   D
Sbjct: 801 FEGGWMRLPEQWRDPQLAAT--WEKLRAVRQEVNKALEQARTDKVIGASTEAKLILKVAD 858

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
             L + L E       A  L+ +FI SQVE++ + P                G++ + + 
Sbjct: 859 PHLHALLEER------AAELRYLFITSQVELVKAGP----------------GEEDLQVA 896

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V  AEG KC RCWNYST+VG F EHP LC RC   LA
Sbjct: 897 VQPAEGKKCVRCWNYSTRVGEFAEHPELCERCVAALA 933


>gi|255083528|ref|XP_002504750.1| predicted protein [Micromonas sp. RCC299]
 gi|226520018|gb|ACO66008.1| predicted protein [Micromonas sp. RCC299]
          Length = 954

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/356 (56%), Positives = 243/356 (68%), Gaps = 32/356 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F+RYGVW DW +PYLTL PEYEAAQ+EVFGQM L G++YRGKKPVHWSPSS TALAEAE
Sbjct: 124 AFRRYGVWGDWEDPYLTLLPEYEAAQMEVFGQMFLNGHVYRGKKPVHWSPSSMTALAEAE 183

Query: 63  LEYPEGHVSRSIYAVFRMVSA------PPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAV 116
           LEYPEGHVS+S+Y  F +VS       P   + +L        LAVWTTTPWT+PANAAV
Sbjct: 184 LEYPEGHVSQSVYVAFPLVSGNIPDGFPAEHASVLEA---GASLAVWTTTPWTMPANAAV 240

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF---IIVASDLVPTLEAKW 173
           AVN KL+Y+ V++                  G+V K+  ++    ++VA  LV  +   W
Sbjct: 241 AVNDKLEYSFVKVTGA--------------SGDVEKESSRMVGKTLVVAQGLVAEVATTW 286

Query: 174 GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           G  L    T+ GS L    Y HP+  R  PVV GGDYITT+SGTGLVHTAPGHGQEDY+T
Sbjct: 287 GLTLETLCTVPGSALVGFEYTHPMYGRASPVVAGGDYITTDSGTGLVHTAPGHGQEDYMT 346

Query: 234 SLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
            LK+GLP+LSPVDD+G FT+EAG    G  VL DGN A ++ L    +LI++EPY HKYP
Sbjct: 347 GLKFGLPLLSPVDDKGLFTDEAGDDLVGKSVLKDGNEACIEKLRHSDALILQEPYNHKYP 406

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVS 348
           YDWRTKKPTIFRATEQWFASVEGFR  A+  + ++++VP       GA  +R  VS
Sbjct: 407 YDWRTKKPTIFRATEQWFASVEGFRDEALAELDKIEFVPAS-----GAKRMRPMVS 457



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 194/341 (56%), Gaps = 28/341 (8%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P +GAD LRLWV+S DYT DV+IG  +L+Q SD YRKLRGTLR+L+GN+ D+  + +++ 
Sbjct: 628 PAFGADTLRLWVASTDYTSDVLIGVNILKQTSDAYRKLRGTLRFLMGNIGDFDPLLDAVP 687

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           YD LP  D+YAL +  +++  +  +Y ++Q+ ++   +Q F    LSN Y D +KDRLY 
Sbjct: 688 YDQLPSFDRYALRRTADMLAEMDRAYATHQYSQVTAQLQSFTAF-LSNVYLDASKDRLYV 746

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              T   RR  QTV++  +  ++ V+API PH+AE+ +  LP+          E VF   
Sbjct: 747 ESPTGVPRRCAQTVVNEIVTRLLCVVAPIAPHMAEEAFTALPYK------PGHESVFLRG 800

Query: 515 WPVLDEKWRT-FPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           W     +W       E  FW   L +R EVN+ +E  R  K++G+SLEAK  ++  DA+L
Sbjct: 801 WVDAAPEWTAGMDDAEAGFWATALAIRGEVNRAIETGRNEKILGASLEAKAVIYASDAAL 860

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           A  +         A+ L++ FI+SQ+EV+ S  +   +     G+          +G  +
Sbjct: 861 ADAITTR------AEELKQAFIVSQLEVVSSVDDVTAK---CGGQC---------VGACK 902

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSM 674
           A+G+KC RCW Y   +GS   HP LC RC  ++ ++  PS+
Sbjct: 903 ADGAKCARCWGYFGGLGSDERHPELCPRCTPIV-IEKDPSL 942


>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1083

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/345 (58%), Positives = 243/345 (70%), Gaps = 39/345 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ASF+RYGV  D+ NPYLTL PEYEAAQI VFG+M   G+I+RG+KPVHWSPSS+TALAEA
Sbjct: 218 ASFQRYGVIGDFGNPYLTLLPEYEAAQIRVFGEMYKAGHIFRGRKPVHWSPSSKTALAEA 277

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVAV 118
           ELEYPEGHVS+SIY    +VS  PS    L E++ +   L +A+WTTTPWT+PAN AVA+
Sbjct: 278 ELEYPEGHVSKSIYVALDVVS--PSEE--LKEYMEEGEKLKVAIWTTTPWTIPANLAVAI 333

Query: 119 NAKLQYAVVEI-QSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW---- 173
           N  L+Y VV+  +S+L+G S                     ++VA+ LV TLE+K+    
Sbjct: 334 NPDLEYCVVDTHESVLDGKSK--------------------LLVATGLVKTLESKFQLPE 373

Query: 174 GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           G  L +  T  GS L    Y HP+  R  PVV GGDYITTESGTGLVHTAPGHGQEDY+T
Sbjct: 374 GEHLKVVATFPGSTLVGTTYQHPLYERTSPVVAGGDYITTESGTGLVHTAPGHGQEDYLT 433

Query: 234 SLKYGLPILSPVDDEGKFTEEAGK-------FSGLDVLGDGNVAVVKYLDEQMSLIMEEP 286
            LKYGL +LSPVDD GKFT EAG        F GL VLG+GN+AV++ L++  +LI  E 
Sbjct: 434 GLKYGLELLSPVDDVGKFTVEAGSSTVVGDAFVGLSVLGEGNLAVIEALEQAGALIRAEN 493

Query: 287 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           Y HKYPYDWRTKKPTIFRAT QWFASVEGFR+ A+ A+  VKW+P
Sbjct: 494 YGHKYPYDWRTKKPTIFRATAQWFASVEGFREDALKAVDTVKWIP 538



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 197/344 (57%), Gaps = 24/344 (6%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
            P YGADVLRLWV+SVDY GDV +G  +++Q  + YRKLR T RYL+GNL D+    +SI 
Sbjct: 729  PAYGADVLRLWVASVDYAGDVRVGANIIKQTFESYRKLRNTARYLIGNLADFNPATDSIP 788

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            Y+DLP +D++ L  L +++  + ++   YQF +  Q + RF   DLSNFY DVAKDRLY 
Sbjct: 789  YEDLPSMDKWMLGTLSSVLNEVDDAMSQYQFSRATQELLRFSTSDLSNFYLDVAKDRLYI 848

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQTVL + L    + IAPILPH+AED+WQNLP  Y  E  S+   VFE  
Sbjct: 849  SAVNDARRRSCQTVLHSLLEGFAKSIAPILPHMAEDIWQNLP--YKKESDSS---VFEGG 903

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             P   EK  ++P  +   W  + ++RT+VN+VLE+AR  KL+G+SL++  Y++T D  + 
Sbjct: 904  IP---EKLTSYPAFDSDKWDLVRDVRTDVNQVLELARRDKLVGASLDSAAYIYTADEKMR 960

Query: 575  SRLREM---------CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK- 624
              L  +             +  D L+   +ISQV ++ S              Y+ +G+ 
Sbjct: 961  EVLNGLDGDESLITPSVKTNGVDELRTALMISQVNLVDSED---AITSACDATYIAKGEL 1017

Query: 625  DKVWIGVSRAEGSKCERCWNYSTQVG--SFVEHPTLCSRCYEVL 666
                IGV +A+G KC RCW Y  +VG         LC RC + +
Sbjct: 1018 SGCMIGVKKADGVKCGRCWFYDKEVGKHGLRYGEDLCQRCDDAI 1061


>gi|303290709|ref|XP_003064641.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453667|gb|EEH50975.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 977

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/349 (56%), Positives = 239/349 (68%), Gaps = 21/349 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVWADW +PYLTL PEYE AQ+EVFGQM L G++YRGKKPVHWSPSS TALAEAE
Sbjct: 129 SFKRYGVWADWEDPYLTLLPEYEGAQMEVFGQMFLNGHVYRGKKPVHWSPSSMTALAEAE 188

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTS--GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           LEYPEGHVS S+Y  F + +   + +      E L +  LAVWTTTPWT+PANAAVAVN 
Sbjct: 189 LEYPEGHVSTSVYVAFPINADDEAANFPAEHREKLKNASLAVWTTTPWTMPANAAVAVND 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           KL Y++ E+       +   A K+  P +         +IVA+DLV  + ++WG  L   
Sbjct: 249 KLSYSLCEV-------TGVAATKEDAPSSDAAAMVGKTLIVATDLVSDVASRWGLTLAAV 301

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             +AG+ LE   Y HP           G+YITTESGTGLVHTAPGHGQEDY+T LK+GLP
Sbjct: 302 ADVAGAQLEGLTYAHPF------YPADGEYITTESGTGLVHTAPGHGQEDYITGLKHGLP 355

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SPVDD GKFTE+AG   +GL VL  GN A V+ L +  +LIM E Y HKYPYDWRTKK
Sbjct: 356 LISPVDDAGKFTEDAGDDLNGLAVLDAGNAACVEKLRDVGALIMTEAYGHKYPYDWRTKK 415

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVS 348
           PTIFRATEQWFASVEGFR  A+ A+  ++++P       GA  +R  VS
Sbjct: 416 PTIFRATEQWFASVEGFRDEALKALDGIEFIPAS-----GAKRMRPMVS 459



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/366 (35%), Positives = 191/366 (52%), Gaps = 57/366 (15%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P +GAD LRLWV+S DYT DV+IG  VL+Q SD YRKLRGTLR+L+GN+ D+    +
Sbjct: 627 KQDPAFGADTLRLWVASTDYTSDVLIGMNVLKQTSDAYRKLRGTLRFLMGNIGDFAPEKD 686

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQ--RFIIVDLSNFYFDVAK 449
            + Y+DLP  ++YAL +   +V  +   Y+++ +      +Q        LSN Y DV+K
Sbjct: 687 GVKYEDLPAFERYALRRTAAMVNEMERHYQNFAYSGATATLQARSSFTTFLSNVYLDVSK 746

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY     S  RR+CQTV+ AH++  +   +  L       W+  P  +   DGS    
Sbjct: 747 DRLYIESPNSPERRACQTVV-AHVVESLLACSVFLAG-----WKTPPAEW--HDGSHNGG 798

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           + ++ +                FW  IL +R EVN+ LE+AR  K+IG+SLEA   ++  
Sbjct: 799 MSDADYA---------------FWNSILAVRGEVNRALEIARGEKIIGASLEASAAVYAS 843

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN----------GLI--------- 610
           DAS A RL          D L+R+ ++S++ V+               G +         
Sbjct: 844 DASFAERLAAAT------DDLKRVTLVSEMTVVADEAEISNACGGDGVGAVTELDVTALE 897

Query: 611 --RNIPYSGEYL---VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE- 664
             R+   + E +    EG  +V +GV RA G+KC RCW Y+T  GS   HP LC+RC   
Sbjct: 898 SDRSTAGAAEVIRGGAEGSGRVVVGVRRATGTKCARCWEYTTDAGSDERHPELCARCTPI 957

Query: 665 VLAVQP 670
           V+A+ P
Sbjct: 958 VIAIDP 963


>gi|397638857|gb|EJK73254.1| hypothetical protein THAOC_05131 [Thalassiosira oceanica]
          Length = 1055

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/341 (58%), Positives = 240/341 (70%), Gaps = 32/341 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ASF+RYGV  D++NPYLTL PEYEAAQI VFG+M  QG+I+RG+KPVHWSPSSRTALAEA
Sbjct: 201 ASFQRYGVIGDFDNPYLTLLPEYEAAQIRVFGEMYKQGFIFRGRKPVHWSPSSRTALAEA 260

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYPEGHVS+SIY    +VS  PS     +    +L +A+WTTTPWT+PAN AVA+N +
Sbjct: 261 ELEYPEGHVSKSIYVALDVVS--PSEELQQHVGSGNLKVAIWTTTPWTIPANLAVAINPE 318

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW----GTKL 177
           L+Y VV+         A P        NVL  Q K  ++VA  LV +LE K+    G  L
Sbjct: 319 LEYCVVD---------AHP--------NVLDGQSK--LLVAKGLVESLETKFDLSDGDNL 359

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            +  +  GS L    Y HP+  RQ PV+ GGDYITTESGTGLVHTAPGHGQEDY+T LK 
Sbjct: 360 KVIASFNGSSLVGTSYQHPLYERQSPVIAGGDYITTESGTGLVHTAPGHGQEDYLTGLKN 419

Query: 238 GLPILSPVDDEGKFTEEAGKFS-------GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           GL +LSPVDD G+FT EAG  +       G  VLG+GN+AV++ L+E  +L+  E Y HK
Sbjct: 420 GLELLSPVDDVGRFTVEAGSSTIVGDDLVGKSVLGEGNIAVIEALEEAGALLKAEDYGHK 479

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKPTIFRAT+QWFASVEGFR  A+ A+  V+W+P
Sbjct: 480 YPYDWRTKKPTIFRATDQWFASVEGFRDDALKAVDSVQWIP 520



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/344 (41%), Positives = 194/344 (56%), Gaps = 23/344 (6%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
            P YGADVLRLWVSSVDY GDV +G  +++Q  + YRKLR T RYL+GNL D+    ++I 
Sbjct: 711  PAYGADVLRLWVSSVDYAGDVRVGSNIIKQTFESYRKLRNTARYLIGNLDDYNPSTDAIP 770

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            YDDLP +D++ L  L  ++  + ++Y +YQF +    I RF   DLSNFY DVAKDRLY 
Sbjct: 771  YDDLPSMDKWMLGTLTKVLNEVDDAYSNYQFSRATNEILRFATADLSNFYLDVAKDRLYI 830

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                 F RRSCQTVL   L    +  APILPH+AED+WQNLP+    ++ S    VFE  
Sbjct: 831  SAIDDFRRRSCQTVLHKLLEGFAKSFAPILPHMAEDIWQNLPYKAEGDNSS----VFEGG 886

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             P     +  F   +   W  I ++RT+ N+VLE+AR  KL+G+SL+A  Y++T+D  + 
Sbjct: 887  VPAELLSYSEF---DKERWELIRDVRTDANQVLELARQDKLVGASLDAAAYIYTEDEIIR 943

Query: 575  SRLREMCTAKH---------DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK- 624
              L E+   +H           D L+   +ISQV ++ S    L         Y  +G+ 
Sbjct: 944  KVLGELDGDEHIISPAVKTNGVDELRTALMISQVHLVDSE---LDVTSACDSTYTAKGEL 1000

Query: 625  DKVWIGVSRAEGSKCERCWNYSTQVGSF--VEHPTLCSRCYEVL 666
                IGV +AEG KC RCW Y T VG         LC +C   +
Sbjct: 1001 SGCTIGVKKAEGKKCGRCWFYDTNVGPHGKCHGDDLCQKCVNAI 1044


>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 984

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/339 (55%), Positives = 235/339 (69%), Gaps = 25/339 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R+G+WADW+ PYLTL  +YEAAQI VFG M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 153 AGFRRWGIWADWDQPYLTLQKDYEAAQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEA 212

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLP-------DLGLAVWTTTPWTVPA 112
           ELEYP+GH S S++A F  V  P   +  L +    P        L +A+WTTTPWT+PA
Sbjct: 213 ELEYPDGHSSPSVFAAFPAVELPSELADTLEQAGLSPAQATAEGGLAVAIWTTTPWTLPA 272

Query: 113 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 172
           N AV+VN +L YA+  I++  +GD+ APA                 ++VA++L  +LE  
Sbjct: 273 NLAVSVNERLDYAICAIEA--QGDTPAPAAS--------------HLVVAAELRESLETS 316

Query: 173 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 232
            G  L    ++ GS LE  +Y HP+  R  PVVIGGDYITTE+GTGLVHTAPGHG +D+ 
Sbjct: 317 LGLSLKPLVSVKGSALEGLQYRHPLLERTSPVVIGGDYITTEAGTGLVHTAPGHGVDDFN 376

Query: 233 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           T  KY LP+L PVD+ G  T EAG F+G +VL D N  ++  L+E   L+ +E YEH+YP
Sbjct: 377 TGRKYKLPVLCPVDEAGNLTAEAGPFAGTNVLKDANPTIISALEETGLLLKQERYEHRYP 436

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTKKPTIFRATEQWFASVEGFRQAA+DAI QV+W+P
Sbjct: 437 YDWRTKKPTIFRATEQWFASVEGFRQAALDAIAQVEWLP 475



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/339 (41%), Positives = 213/339 (62%), Gaps = 21/339 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 663 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSKD 722

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I Y++LP++DQ+ L +  +++ ++   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 723 AIPYEELPLLDQWMLQRTASLIDSVSGDFERYEFYRFFQALQNFCVVDLSNVYLDIAKDR 782

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY  G   F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP++       A   VF
Sbjct: 783 LYVSGANDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSV------AETSVF 836

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E  WP   E+WR   + +     +ILELR  VN+ LE  R+   +G+SLEA+V L   + 
Sbjct: 837 ERGWPTAPEQWRNSALEQPM--NQILELRALVNRQLESCRSAAKLGASLEAQVQLSLGEG 894

Query: 572 SLASR--LREMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           S +++  L  +  + H   D L    ++S +E+  S P  ++     +G         + 
Sbjct: 895 SESTQAALTWLENSAHPKVDNLADWLLVSALEIGGSNPEAVLAEASENG---------IT 945

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + + +A G KCERCW+Y + +G    HPTLC RC EVL+
Sbjct: 946 VQIRKAAGQKCERCWHYESDIGEHAAHPTLCGRCVEVLS 984


>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 942

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/336 (58%), Positives = 233/336 (69%), Gaps = 31/336 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ASF+R GVW  W+ PYLTL PEYEAAQIEVFGQM+L+GYIYRG KPVHWSPSS+TALAEA
Sbjct: 138 ASFQRLGVWGSWDRPYLTLSPEYEAAQIEVFGQMALKGYIYRGLKPVHWSPSSQTALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYP+ H+S SIY  F + S  P+   +L  F+P L  A+WTTTPWT+PAN A+  N K
Sbjct: 198 ELEYPDNHISPSIYVAFPLQSLSPAAQPVLEPFMPGLRAAIWTTTPWTIPANLALCFNPK 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L YAVVE                 R G          +++A+DL   LE    T L IK 
Sbjct: 258 LTYAVVE---------------SPRFG---------LLLIAADLRERLEKVLETPLEIKA 293

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL GS LE  +  HP+ +R    V+ GDY+TTESGTG+VHTAPGHG++D+ T  KYGLPI
Sbjct: 294 TLPGSALEYSQGRHPLFDRASLCVL-GDYVTTESGTGIVHTAPGHGEDDFKTGQKYGLPI 352

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLG-----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           LSPVDD+G+FT EAG +F GLDVL       GN AV++ L    +L+ EEPY HKYPYDW
Sbjct: 353 LSPVDDQGRFTAEAGSQFVGLDVLSKKPETSGNAAVIQALQAAGALLKEEPYNHKYPYDW 412

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RTK+PTIFRATEQWFASV GFR+ A+ AI  VKW+P
Sbjct: 413 RTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIP 448



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/345 (45%), Positives = 205/345 (59%), Gaps = 41/345 (11%)

Query: 332 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VG 390
           PQ  P YGADVLRLWVSSVDY+GDV +G  +L QM+D+YRK+R T R+LL NL+D+    
Sbjct: 627 PQTDPAYGADVLRLWVSSVDYSGDVPLGKTILGQMADVYRKIRNTARFLLSNLYDFNPTQ 686

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +++ +  L  +D+Y L +L  +   I ES+ SYQF++ FQ IQ F +VDLSNFY D+AKD
Sbjct: 687 DAVPFAALTELDRYILHRLHEVGSEIGESFASYQFYRFFQAIQNFCVVDLSNFYLDIAKD 746

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RR CQTVLS  L ++ + IAP+L HLAE++W +LP+            V
Sbjct: 747 RLYISHAQSLRRRQCQTVLSLLLENLAKAIAPVLSHLAEEIWSHLPYP------KPTRSV 800

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKL--------IGSSLEA 562
           FE  W  L E WR   +  I  W ++ E+R EVNK LE ARTG++        IG+S EA
Sbjct: 801 FEGGWMKLPEHWRDPQLAAI--WEQLREVRQEVNKALEQARTGRVSGTESFKPIGASTEA 858

Query: 563 KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           KV L   D SL + L+E       A  L+ +FI SQVE+  ++  GL             
Sbjct: 859 KVILKVADPSLYALLQER------AAELRYLFITSQVELEKTSGQGLE------------ 900

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                 + V  A+G KC RCWNYST+VG F EHP LC RC   LA
Sbjct: 901 ------VSVFPADGQKCVRCWNYSTRVGEFAEHPELCERCVAALA 939


>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 997

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/342 (55%), Positives = 233/342 (68%), Gaps = 28/342 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R+G+WADW  PYLTL+  YEAAQI VFG+M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 143 AGFRRWGIWADWEQPYLTLNKAYEAAQIGVFGRMVLAGHIYRGLKPVHWSPSSRTALAEA 202

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---------LPD---LGLAVWTTTPWT 109
           ELEYP+GH S S+Y  F +V+ P S    L             PD   L +A+WTTTPWT
Sbjct: 203 ELEYPDGHTSPSVYVAFPVVALPGSLGARLTALGLTHAETATTPDPGDLAVAIWTTTPWT 262

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VNA L+YA+  +     GD  A   + SR            +IVA+ LV +L
Sbjct: 263 LPANLAVSVNASLEYALCRV-----GDHGANGYRTSR-----------HLIVAASLVESL 306

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
            +    +L    +L GS+LE   Y HP+ +R  PVVIGGDYITTE+GTGLVHTAPGHG +
Sbjct: 307 RSSLQLELEPLLSLRGSELEGVEYRHPLFDRTSPVVIGGDYITTEAGTGLVHTAPGHGVD 366

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K GLP+L PVD+ G  T EAG F+GL+VL D N A++  L+   +L+  EPYEH
Sbjct: 367 DFNTGRKAGLPVLCPVDEGGTLTTEAGPFAGLNVLKDANPAIISALETAGALLRHEPYEH 426

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A+DAI  V W+P
Sbjct: 427 RYPYDWRTKKPTIFRATEQWFASVEGFRAQALDAIAAVDWLP 468



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 27/347 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW----- 387
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+ RK+R T RYLLGNLHD+     
Sbjct: 664 KQQPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVTRKVRNTARYLLGNLHDFDPRPA 723

Query: 388 -RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 446
              G++++  DLP++D++ L +  ++++ +   +E Y+F++ FQ +Q F +VDLSN Y D
Sbjct: 724 AEGGDAVAIADLPLLDRWMLERTASLIEAVSADFERYEFYRFFQALQNFCVVDLSNVYLD 783

Query: 447 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA 506
           +AKDRLY  G + F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP+        A
Sbjct: 784 IAKDRLYVSGASDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYPV------A 837

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              VFE  WP     W    + E      +LELR +VN+ LE  RT   +G+SLEA+V L
Sbjct: 838 ERSVFERGWPTAAASWGEAALVEPLR--PLLELRGQVNRQLESCRTSADLGASLEARVEL 895

Query: 567 FTDDASLASRLREMCTAKHDA-----DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
              +    + L         +     D L    I+SQ+E             P   + L 
Sbjct: 896 ELGNGDRGAALGAALELLQGSPHPSVDNLADWLIVSQLERRDP-------GAPALADPLA 948

Query: 622 EGKD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           E  +  + + ++RAEG KCERCW+  T +G+   HPTLC RC EVL 
Sbjct: 949 EASEGGITVRIARAEGRKCERCWHMETDIGTHASHPTLCGRCVEVLG 995


>gi|116075644|ref|ZP_01472903.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116066959|gb|EAU72714.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 978

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/342 (54%), Positives = 233/342 (68%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR+G+WADW NPYLTL  +YEAAQIEVFG M+L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 159 MAGFKRWGIWADWENPYLTLQKDYEAAQIEVFGAMALKGHIYRGLKPVHWSPSSRTALAE 218

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLG--------LAVWTTTPWT 109
           AELEYP+GH S S+Y  F  V+ P +    L +    LP  G        +++WTTTPWT
Sbjct: 219 AELEYPDGHTSPSVYVAFPAVALPDALRQSLGQQGLELPADGDALGDVLQVSIWTTTPWT 278

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+                          D +   +IVA+DL   L
Sbjct: 279 LPANLAVSVNDRLDYALC------------------------ADNRGRLLIVANDLRDAL 314

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
            AK+ T L  K  + G+DL   RY HP+  R+ PVV+GG+YITTESGTGLVHTAPGHG +
Sbjct: 315 AAKFETTLETKAVVKGADLAGLRYRHPLLERESPVVVGGEYITTESGTGLVHTAPGHGVD 374

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+GLP+L PVD+ G  T+EAG F GL+VL D N  +V+ L++  +L+  E Y H
Sbjct: 375 DFNTGRKHGLPVLCPVDEAGTLTDEAGPFVGLNVLKDANPTIVEALEQSGALLKHESYGH 434

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A++AI QV W+P
Sbjct: 435 RYPYDWRTKKPTIFRATEQWFASVEGFRSEALEAIDQVNWLP 476



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 202/336 (60%), Gaps = 19/336 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +L Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 657 KQEPPYGADVLRLWVSSVDYSADVPIGAGILSQLADVYRKVRNTARYLLGNLHDFDPARD 716

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++ +DLP++D++ L +   ++ +I E++++Y+FF+ FQ++Q + + DLSNFY D+AKDR
Sbjct: 717 AVAIEDLPLLDRWMLQRTAVVLDSISEAFDNYEFFRFFQLLQNYCVSDLSNFYLDIAKDR 776

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQNLP+        A   VF
Sbjct: 777 LYVSAPNDRRRRSCQTVMALIIERLAGAIAPVLCHMAEDIWQNLPYPV------AEPSVF 830

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
              WP + + WR   +       ++ +LR+ VN+VLE  R  + +G+SLEA V +   D 
Sbjct: 831 RRGWPTVPDNWRNESLNAPM--QQLRDLRSAVNRVLEDCRGKRELGASLEAAVRIDVRDP 888

Query: 572 SLASRLREMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            L   +  +    H + D L    ++SQ++         +   P++     E      I 
Sbjct: 889 ELQKAVNWLQEHGHSEVDGLHDWLLVSQLQ---------LGGEPWAEVLASEDSPLAAIE 939

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V+R+ G KCERCW+Y T +G   +HP LC RC  VL
Sbjct: 940 VARSRGQKCERCWHYETDIGQHSDHPDLCGRCVAVL 975


>gi|384253740|gb|EIE27214.1| isoleucyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
          Length = 1000

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/328 (56%), Positives = 228/328 (69%), Gaps = 25/328 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYG+W DW+ PYLTL+P+YEAAQ+ VFG++   G+IYRG+KPVHWSPSS TALAEAEL
Sbjct: 156 FKRYGIWGDWDAPYLTLEPKYEAAQLRVFGKLVAAGHIYRGRKPVHWSPSSATALAEAEL 215

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH SRSIY    + S   +    L E L    +A+WTTT WT+PAN AVAVN ++ 
Sbjct: 216 EYPEGHTSRSIYVAMPLTSLGDAMPEDLKEKLSGAAVAIWTTTGWTIPANEAVAVNERMN 275

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y            + + A+++              ++VA +LV +L AK+G +L    +L
Sbjct: 276 YG-----------AESWAHRR--------------LVVAEELVDSLGAKFGVQLQRLGSL 310

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  L  C+Y HP+  R  PV+IGGDYITTESGTGLVHTAPGHGQEDY   LK GLPI S
Sbjct: 311 TGGQLAGCQYRHPLFERTSPVLIGGDYITTESGTGLVHTAPGHGQEDYQVGLKNGLPISS 370

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FTEEAG F GL VL +G  AV++ L ++  L+ EE Y HKYPYDWRTK PTIF
Sbjct: 371 PVDDDGVFTEEAGPFKGLPVLKEGTAAVIEALQQKGCLLKEERYAHKYPYDWRTKLPTIF 430

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT+QWF SVEGF+ AAMDA+  V+W+P
Sbjct: 431 RATDQWFVSVEGFQAAAMDAVRSVQWIP 458



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 217/345 (62%), Gaps = 22/345 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P  GADVLRLWV+SVDYTGD+++GP V+ Q++D+YRKLR TLR++LGNLHD+    +++ 
Sbjct: 642 PALGADVLRLWVASVDYTGDMVMGPSVMSQVADVYRKLRFTLRFILGNLHDFAPASDAVP 701

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           YD LP  D++ L     ++  +  SYE+YQFF+++Q +QRF++ DLSN+Y DV KDRLY 
Sbjct: 702 YDALPATDRFILSSFATLLSGLSASYETYQFFRVYQAVQRFVVADLSNWYLDVIKDRLYV 761

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
               SF RR+ QTVL + L  ++  +API+PHLAED WQ LP+       + +  VF++ 
Sbjct: 762 SADDSFDRRAAQTVLHSLLQGLLPALAPIVPHLAEDAWQALPWE------APSVSVFQAG 815

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W    ++W   P  +   +  +L++R EVN VLE AR    +G+SLEAKV L   DA LA
Sbjct: 816 WLAPPQQWAAIPADQQRAFKALLQIREEVNMVLERARQDGFLGASLEAKVLLHVADADLA 875

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           + LR +  A + AD L+  FI+SQ E+  +   G + +  YS   ++EG   + +GVSRA
Sbjct: 876 ASLRSLQGAGNAADPLRYAFIVSQAEL--AEDEGQVASTSYSKATVLEGVGSIAVGVSRA 933

Query: 635 EGSKCER-------------CWNYSTQVGSFVEHPTLCSRCYEVL 666
           +G KC R             CWNYSTQVG   +H  LC RC  V+
Sbjct: 934 DGQKCSRQAPAPGHSSLMHKCWNYSTQVGCDHDHSQLCERCAPVI 978


>gi|159481678|ref|XP_001698905.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158273397|gb|EDO99187.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 902

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/336 (58%), Positives = 232/336 (69%), Gaps = 9/336 (2%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVWADW  PY+TL+P YEAAQ++VFG+M   G+IYRG KPVHWSPSSRTALAEAEL
Sbjct: 94  FKRYGVWADWAAPYVTLEPAYEAAQLQVFGKMYTNGHIYRGLKPVHWSPSSRTALAEAEL 153

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGL---LNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           EYPEGH S S+Y    M +AP   +     L E L     A+WTTTPWT+PAN AVA+N 
Sbjct: 154 EYPEGHKSTSVYVALPM-TAPGHKAAANPQLAEALQGSAFAIWTTTPWTIPANLAVALND 212

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF----IIVASDLVPTLEAKWGTK 176
           +L Y VVE+Q+    +    A                +    ++VA +LV  L  K G +
Sbjct: 213 QLDYCVVEVQAAEGAEGEEGAEGAEAAAAAAAAAAAGWAVRRLVVAKELVGRLGEKTGAR 272

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             +  T+ GS+LE C Y HP+ +R  PVVIGGDYITTE+GTGLVHTAPGHGQEDY+   +
Sbjct: 273 FQVLTTVKGSELEGCTYKHPLYDRVSPVVIGGDYITTETGTGLVHTAPGHGQEDYLVGQR 332

Query: 237 YGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
            GLP+LSPVDD G FT EAG+ F+GL V G+GN AV   L E   L+ EE YEHKYPYDW
Sbjct: 333 CGLPLLSPVDDAGCFTAEAGEAFAGLAVQGEGNRAVCAALREAGVLLKEELYEHKYPYDW 392

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RTKKPTIFRAT QWFASVEGFR +A++AI  V WVP
Sbjct: 393 RTKKPTIFRATSQWFASVEGFRGSALEAIRGVGWVP 428



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 183/332 (55%), Gaps = 33/332 (9%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWV+SVDYT DV IG  +L+QM+D+YRK+RGTLR+LLGNL D+    +++ 
Sbjct: 599 PAYGADVLRLWVASVDYTSDVAIGGAILKQMADMYRKVRGTLRFLLGNLSDYDPAAHAVP 658

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y  LP +D+Y L +L  ++  +  +Y++YQ     Q   R           D A      
Sbjct: 659 YAQLPGLDRYLLSRLHAVLTEVAAAYDNYQVGGAVQWAGRGGGGAGLGGPDDPA------ 712

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RR+CQTVL A L  ++  +AP++PH+AED W NLP+A        A  VF++ 
Sbjct: 713 -------RRACQTVLDALLRGLLAALAPLVPHMAEDAWLNLPYA------RPAGSVFQAG 759

Query: 515 WPVLDEKWRT-FPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           W   D  W       +   W  +LE+R   N VLE AR+GK IG+ LEA+V +   +   
Sbjct: 760 WARPDPAWAAGLSEQQAAGWAVLLEVRDAANAVLEKARSGKAIGAGLEARVVVHVSEPVA 819

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY-LVEGKDKVWIGVS 632
           A+ L  +  A + AD L+ + I+SQV          +R  P+        G   + +GV+
Sbjct: 820 AAALAALDAAGNGADELRYLLIVSQVG---------LRLCPFHDTAPSAAGAGAISVGVT 870

Query: 633 RAEGSKCERCWNYSTQVG--SFVEHPTLCSRC 662
           RA GSKC RCWNYS  VG  +  ++P LC RC
Sbjct: 871 RASGSKCARCWNYSPAVGHTAPADYPDLCERC 902


>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1060

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/335 (57%), Positives = 238/335 (71%), Gaps = 28/335 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ASF+RYGVW D+  PYLTL PEYEAAQIEVFG+M  +G+I+RG+KPV+WSPSSRTALAEA
Sbjct: 213 ASFRRYGVWGDFEKPYLTLQPEYEAAQIEVFGKMFTEGHIFRGRKPVNWSPSSRTALAEA 272

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEYP GH S S+YA F +  A P+    +      L ++VWTTTPWT+PAN AVAV+  
Sbjct: 273 ELEYPAGHTSTSVYAAFEVKEATPALEKYMGSG-GGLAVSVWTTTPWTLPANLAVAVSET 331

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK----L 177
           ++Y+VVE  S                   L D+K   ++VA+DLV  + AK G +    L
Sbjct: 332 IRYSVVEHAS-------------------LGDRK---LLVATDLVGAVSAKIGLEEGDTL 369

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            + +T  G DL   +Y HP+ +R   VV+GGDYITTE+GTGLVHTAPGHGQEDYVT  KY
Sbjct: 370 KVVETFTGKDLIGTKYQHPLCDRVSEVVVGGDYITTETGTGLVHTAPGHGQEDYVTGQKY 429

Query: 238 GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           GLP+LSPVDD G+FT EAG +F GL+VL +GN  V+  L+E   L+  E Y+HKYPYDWR
Sbjct: 430 GLPLLSPVDDAGRFTVEAGDRFKGLNVLKEGNEEVLVALEEAGGLLAREAYQHKYPYDWR 489

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TKKPTIFRAT+QWFASV+ FR  A+ AI +V+W+P
Sbjct: 490 TKKPTIFRATDQWFASVDRFRDTALSAIEKVQWIP 524



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/366 (43%), Positives = 225/366 (61%), Gaps = 32/366 (8%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
            ++ P YGADVLRLWVSSVDY+GDV +G Q+++Q S+ YRKLR TLRYL G+L D+    +
Sbjct: 705  KQKPAYGADVLRLWVSSVDYSGDVCVGDQIIKQASESYRKLRNTLRYLTGSLFDFDPEKD 764

Query: 392  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            S+ Y+DLP +D+Y L  L ++++ +  +++ YQF+K  Q++QRF   DLSNFY D AKDR
Sbjct: 765  SVPYEDLPSLDKYMLGMLSSVLEEVENAFDGYQFYKASQVLQRFATADLSNFYLDGAKDR 824

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY   +  F RRSCQTVL   L+S+   +APILPH+AEDVWQ LPF    E G  +  +F
Sbjct: 825  LYISSSDDFRRRSCQTVLHTMLMSLSTAMAPILPHMAEDVWQTLPF--KPEGGQRS--IF 880

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            ++ W             E   WG++  LR +VNK LE AR  K++GSSLE +V+++  D 
Sbjct: 881  QAGWATGRHAQH-----EAEKWGRLRTLRNDVNKALEQARGAKVLGSSLEGQVFIYCSDD 935

Query: 572  SLASRLREMC---TAKHD------ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
             L + L  +    T K +       D L+ + ++S++ ++ ST    + +    G   V 
Sbjct: 936  GLKAELESLLGDETLKREPELSNGVDDLRFVLMVSKINLVSSTE--AVDSACAEG-MTVS 992

Query: 623  GKDK---VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY---EVLAVQPIPSM-- 674
             KD      +GVSRA G+KCERCW +   VGS  +HP+LCSRC+   E L + P P++  
Sbjct: 993  AKDSESGCVVGVSRAPGNKCERCWYHCDSVGSHEDHPSLCSRCHGVVEGLGLAPPPAVET 1052

Query: 675  --AAVS 678
              AAVS
Sbjct: 1053 EPAAVS 1058


>gi|308802504|ref|XP_003078565.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057018|emb|CAL51445.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1011

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/329 (58%), Positives = 232/329 (70%), Gaps = 24/329 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVWADW +PY+TL PEYEAAQ+EVFG M L G+IYRGKKPVHWSPSS TALAEAEL
Sbjct: 188 FKRYGVWADWEDPYMTLLPEYEAAQMEVFGSMFLNGHIYRGKKPVHWSPSSMTALAEAEL 247

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S+SIY  F +   P ST   L + L D  LA+WTTTPWT+PANAAVAVNAKL 
Sbjct: 248 EYPEGHFSQSIYVAFPVSEVPDSTPSALRDLLKDASLAIWTTTPWTMPANAAVAVNAKLD 307

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+V  ++S                G  L        +VA  L   + AK  ++L    T 
Sbjct: 308 YSVCRVEST---------------GKTL--------VVAEGLREAVAAKLESELTTLGTF 344

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G D EN +Y HP   R+ PV+IGG+YITTE+GTGLVHTAPGHGQ+DY++ +KYGLP+ S
Sbjct: 345 KGQDFENVQYSHPFYERKSPVIIGGEYITTETGTGLVHTAPGHGQDDYISGMKYGLPLYS 404

Query: 244 PVDDEGKFTEEA-GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           PVD+ G FT EA G   G DVLGDGNV  ++ L+   +L+  E Y HKYPYDWRTKKPTI
Sbjct: 405 PVDNAGLFTAEAGGDLEGKDVLGDGNVLCIEKLETAGALLKREKYGHKYPYDWRTKKPTI 464

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFR+ A+  + +++++P
Sbjct: 465 FRATEQWFASVEGFREDALKELDKLQFIP 493



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 211/349 (60%), Gaps = 14/349 (4%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++ PGYGAD LRLWV+S DY+GDV IG  +++Q S+ YRKLRGT+R+ +G L D+     
Sbjct: 673  KQEPGYGADTLRLWVASTDYSGDVSIGMNIIKQTSEAYRKLRGTIRFAMGVLDDFNPAQQ 732

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + YDDLP+ D+Y L +L   VK I  SY+++ + ++   +  F    LSN Y DV+KD+L
Sbjct: 733  VPYDDLPVFDKYVLHRLNATVKEIESSYKAFDYSRVVSAVTSFTTF-LSNVYLDVSKDKL 791

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y G    F RR+CQTV+SA +  I+  IAP+ PH+AE+ +Q LP+    +  + A  VF 
Sbjct: 792  YIGAQDDFKRRACQTVVSALVERIIAAIAPLTPHMAEEAFQALPY----DKPNGAISVFI 847

Query: 513  SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            + WP     W      ++ FW   LE+R  VNKVLE ART KL+G+SLE+KV +   DA 
Sbjct: 848  AGWPSTPAAWSELDAKDVEFWDSFLEIRDGVNKVLEEARTAKLLGASLESKVTMHCSDAK 907

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              ++L    T +  A+ L+ +FI+S+V++  S+ +  I    +     V G   V IGV+
Sbjct: 908  FLAKL----TGEGIAEELRYLFIVSEVQLADSS-DVAIAGCDFKSVVDVPGAGTVSIGVA 962

Query: 633  RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL-AVQP---IPSMAAV 677
            RA GSKC RCWN+S  VGS  +H  LC RC  ++ A  P   +P  AA 
Sbjct: 963  RAAGSKCARCWNFSPLVGSDAKHSQLCERCVPIVNATHPDLVVPEPAAA 1011


>gi|87125070|ref|ZP_01080917.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167390|gb|EAQ68650.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 969

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 232/342 (67%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR+G+WADW +PYLTL  +YEAAQIEVFG M+L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MAGFKRWGIWADWEHPYLTLQKDYEAAQIEVFGTMALKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLG--------LAVWTTTPWT 109
           AELEYP+GH S S+Y  F  + APP+    L +    LP  G        +A+WTTTPWT
Sbjct: 209 AELEYPDGHTSPSVYVAFPTLEAPPALRTALQQQGVELPADGDALQDALQVAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L Y + +                        D +   +IVA+DL  TL
Sbjct: 269 LPANLAVSVNDRLDYCLAD------------------------DGRGSLLIVAADLRDTL 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
             K G  L  K  + G+ L    Y HP+  R+ PV++GG+YITTESGTGLVHTAPGHG +
Sbjct: 305 AGKLGRPLAAKAVVKGALLAGLVYRHPLLERESPVLVGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+GLP+L PVD+ G  TEEAG F+GL+VL D N A++  L+   +L+++E Y H
Sbjct: 365 DFNTGRKHGLPVLCPVDEAGTLTEEAGPFAGLNVLKDANPAIIDALETAGALLLQESYSH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASVEGFRSEALAAIDAVEWLP 466



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 140/336 (41%), Positives = 203/336 (60%), Gaps = 18/336 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+  G +
Sbjct: 647 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTARYLLGNLHDFDPGRD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +  + LP++D++ L +   ++  I E++E Y+FF+ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 GVPMEALPLLDRWMLQRTAVVLDEISEAFERYEFFRFFQLLQNYCVADLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQNLP+A       A + VF
Sbjct: 767 LYVSAPNDRRRRSCQTVMALIIERLAGAIAPVLCHMAEDIWQNLPYAV------AEDSVF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
              WPV+ + WR   +       ++ +LR  VN+VLE  R  + +G++LEA V +     
Sbjct: 821 RRGWPVVPDSWRDESLNAPM--QQLRDLRGAVNRVLEECRGRQELGAALEAAVRVEARSE 878

Query: 572 SLASRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           SL S L  +      + D L+   ++SQ++ L   P   +     S    V       I 
Sbjct: 879 SLQSALTWLADHGDPEVDGLRDWLLVSQLQ-LGGEPWAELLASDDSNPLAV-------IE 930

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V+RA G KCERCW+Y + +G   +HP+LC RC  VL
Sbjct: 931 VARARGEKCERCWHYESDIGQHADHPSLCGRCVAVL 966


>gi|352095072|ref|ZP_08956175.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
 gi|351679083|gb|EHA62225.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
          Length = 968

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 231/342 (67%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR+G+WADW NPYLTL  +YEAAQI+VFG M+L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MAGFKRWGIWADWENPYLTLQKDYEAAQIDVFGTMALKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL---------GL--AVWTTTPWT 109
           AELEYP+GH S S+Y  F +V  P      LNE   DL         GL  A+WTTTPWT
Sbjct: 209 AELEYPDGHTSPSVYVGFPVVDLPEGLRSKLNEQGLDLPAQSNALSEGLQVAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L Y + +                        D K  F+IVA++L   +
Sbjct: 269 LPANLAVSVNERLDYCLAD------------------------DGKGRFLIVAAELCDAI 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
            +K    L  K T+ G+DL    Y HP+  R+  +V+GG+YITTESGTGLVHTAPGHG +
Sbjct: 305 ASKLERPLQAKATVKGADLAGITYSHPLLERRSAIVVGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+GLP+L PVD+ G  T EAG+F GL+VL D N  ++  L++  SL+++E Y H
Sbjct: 365 DFNTGRKHGLPVLCPVDEAGTLTAEAGRFEGLNVLKDANAVIITALEDCGSLLLQEDYSH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASVEGFRTEALTAIDGVQWLP 466



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/340 (41%), Positives = 206/340 (60%), Gaps = 27/340 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ+SD+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFVPSRD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+  +LP++D++ L +   ++  I E++E Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAIRELPLLDRWMLQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    T   RRSCQTV++  +  +   IAP+L H+AED+WQN+P+       +  E VF
Sbjct: 767 LYVSAPTDKRRRSCQTVMALIIERLAAAIAPVLCHMAEDIWQNIPYP------TETESVF 820

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            S WP + E+WR      P+ E+       ELR  VNKVLE  R+ +++G+SLEA V L 
Sbjct: 821 LSGWPTVPEEWRDDSLQAPMQELR------ELRAAVNKVLEECRSKRMLGASLEAAVRLE 874

Query: 568 TDDASLASRLREM-CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
               +L   L  +      + D L+   ++SQ++         I   P++     +  + 
Sbjct: 875 ARTPALQDALHWLQSKGDQEVDGLRDWLLVSQLQ---------IGGEPWAELLASDDNEL 925

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V+ + G KCERCW+Y + +G    HP+LC RC  VL
Sbjct: 926 AVIEVALSRGEKCERCWHYESDIGQHSAHPSLCGRCVSVL 965


>gi|428176696|gb|EKX45579.1| hypothetical protein GUITHDRAFT_71180 [Guillardia theta CCMP2712]
          Length = 988

 Score =  368 bits (945), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 197/337 (58%), Positives = 229/337 (67%), Gaps = 37/337 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVWADW+ PYLTLDP+YEAAQIE FG M   G+IYRG+KPV+WSPSSRTALAEAE
Sbjct: 158 SFKRYGVWADWSEPYLTLDPKYEAAQIETFGAMLKGGHIYRGRKPVNWSPSSRTALAEAE 217

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGH SRS+YA F +V   PS +  +     +L +A+WTTTPWT+PAN AVAVN KL
Sbjct: 218 LEYPEGHKSRSMYAAFTVVE--PSEA--VKPHSENLKVAIWTTTPWTIPANLAVAVNEKL 273

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG------TK 176
           +Y++VE                            V  +VA DL   L AK         +
Sbjct: 274 EYSIVE-------------------------HHGVKYVVAKDLKGALAAKLKKGEEDEVE 308

Query: 177 LVIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           L     + G +L   +Y HP+   R  PVVIGGDYITTESGTGLVHTAPGHG EDY T L
Sbjct: 309 LKEIAVITGKELAGTKYQHPLYKERINPVVIGGDYITTESGTGLVHTAPGHGVEDYQTGL 368

Query: 236 KYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYD 294
           KYGL +LSPVDD G+FT EAG    G DVL DGN  V++ ++E  +LI EE Y HKYPYD
Sbjct: 369 KYGLELLSPVDDAGRFTAEAGPLLEGKDVLKDGNERVLELMEEAGALIKEEEYGHKYPYD 428

Query: 295 WRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           WRTKKPTIFRAT+QWFASVE FR+ AM AI  VKW+P
Sbjct: 429 WRTKKPTIFRATDQWFASVENFREKAMGAIDTVKWIP 465



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 141/345 (40%), Positives = 210/345 (60%), Gaps = 28/345 (8%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P +GAD LRLWV+SVDYTGDV +G  +++Q+SD YRK+R TLRYLLGNLH +    +S+ 
Sbjct: 652 PAFGADTLRLWVASVDYTGDVRVGGNIMKQISDSYRKIRNTLRYLLGNLHGFDPKKHSVK 711

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y+DLP +D++ L +L  + + +R++Y+++QF++ +Q I +  I +LSNFY D+AKDRLY 
Sbjct: 712 YEDLPSVDKWMLGRLARVQEEVRDAYDTFQFYRAYQAILQVCITELSNFYLDIAKDRLYI 771

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL A L  +   I+P+LPH+AED WQNLP+ +          VFE  
Sbjct: 772 SAEDDVRRRSCQTVLHAALEMLTTAISPMLPHMAEDAWQNLPWEHV-------SSVFEHG 824

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS-- 572
           W  LD     +P  E   W  I  LR +VN+ +E AR  KLIG++LE  V ++  D    
Sbjct: 825 WKQLD-----YPSHEGERWDYIRSLRDDVNQCMEAARADKLIGATLEGSVAIYVADEEKK 879

Query: 573 --LASRLRE--MCTAK-----HDADTLQRIFIISQVEVLPSTPNGL--IRNIPYSGEYLV 621
             + S L E  M T++     +  D L+ +F++S V+++  TP  +  + N  ++   + 
Sbjct: 880 QLVTSLLHEVSMLTSETSPGFNKVDDLRFLFLVSDVKIV-DTPEDVTSLCNEKHTLS-IS 937

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +     ++GV+RA+G KCERCW YS  VG+      +C RC + +
Sbjct: 938 DSASGCFVGVARAQGKKCERCWFYSDTVGTHEGLENICPRCAQAV 982


>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1052

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 198/364 (54%), Positives = 241/364 (66%), Gaps = 38/364 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F+RYG++ D+  PYLTL PE+EAAQI VFG+M  +GYI+RG+KPVHWSPSSRTALAEAE
Sbjct: 200 AFQRYGIFGDFEKPYLTLQPEFEAAQIRVFGEMFQKGYIFRGRKPVHWSPSSRTALAEAE 259

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVS+SIY  F  V  P       +     L +A+WTTTPWT+PAN AVAVN +L
Sbjct: 260 LEYPEGHVSKSIYVAFN-VDTPSEVLASFHSTEEPLKVAIWTTTPWTMPANMAVAVNPEL 318

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW----GTKLV 178
            Y+VV+                         +K   ++VA+DL  +L  K+       L 
Sbjct: 319 SYSVVQ------------------------HEKTGKLLVATDLASSLARKFDLPEDETLD 354

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           I  T  G DL    Y HP+ +R+ PV+ GGDYITTESGTGLVHTAPGHGQEDY+T LK G
Sbjct: 355 ILATFPGKDLVGTIYKHPMYDRKSPVLAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNG 414

Query: 239 LPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           L ILSPVDD GKFT EAG ++ G+ VL +GN+A++  L E  SL+  E Y HKYPYDWRT
Sbjct: 415 LEILSPVDDVGKFTIEAGERYVGMRVLAEGNLAMIDALQEAGSLLKAEDYGHKYPYDWRT 474

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVM 357
           KKPTIFRAT+QWFASV GFR  A+DA+ +VKWVP       G + +R   S VD  GD  
Sbjct: 475 KKPTIFRATDQWFASVAGFRDQALDAVEKVKWVPE-----VGKNRIR---SFVDGRGDWC 526

Query: 358 IGPQ 361
           I  Q
Sbjct: 527 ISRQ 530



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/353 (37%), Positives = 205/353 (58%), Gaps = 31/353 (8%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW----- 387
            ++ P YGADVLRLWV++ DY+GDV+IG  +++Q  D YRKLR T RYL+GNL D+     
Sbjct: 690  KQDPAYGADVLRLWVANSDYSGDVLIGDNIIKQTFDSYRKLRNTARYLIGNLADFVPSDS 749

Query: 388  RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
               N+++YDDLP +D++ L +L  +++ + E+ + +Q+ +  Q + RF   DLSNFY DV
Sbjct: 750  TDSNAVAYDDLPSMDKWMLGRLSAVLRTVNEAMDDFQYQRAIQELLRFASADLSNFYLDV 809

Query: 448  AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            AKDRLY        RRSCQTVL A L    + I+PILPH+AED+WQNLP+        + 
Sbjct: 810  AKDRLYISAMDDARRRSCQTVLYACLEGFTKAISPILPHMAEDIWQNLPYQ------KST 863

Query: 508  EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            + VFE  WP     +  F   +   W  +  +R +VNK+LE AR+ KL+G+SL+A  Y++
Sbjct: 864  DSVFEGGWPTNLMSYAEF---DSQTWDLVRLVRDDVNKMLESARSDKLVGASLDAAAYIY 920

Query: 568  TDDASLASRLREMC---------TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGE 618
              D+   + L ++             +  D L+   ++SQ+ ++ +  +  +R      +
Sbjct: 921  VPDSEKKAILEKLVGDASLVAPPVKTNGVDELRTALMLSQIHLVENEND--VREA--CED 976

Query: 619  YLVEGKDK---VWIGVSRAEGSKCERCWNYSTQVGSF-VEHPTLCSRCYEVLA 667
              V  +D      +GV RA G+KC RCW Y  +VG+  + +  +C RC E ++
Sbjct: 977  KYVSSRDTSSGCIVGVGRAVGTKCARCWFYDEEVGNHSLTYADVCQRCNEAIS 1029


>gi|318042707|ref|ZP_07974663.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 977

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 186/339 (54%), Positives = 230/339 (67%), Gaps = 25/339 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R+G+WADW+ PYLTL   YEAAQI VFG M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 146 AGFRRWGIWADWDQPYLTLQKSYEAAQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEA 205

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---------LPDLGLAVWTTTPWTVPA 112
           ELEYP+GH S S+YA F  V  P + +  LN              L +A+WTTTPWT+PA
Sbjct: 206 ELEYPDGHTSPSVYAAFPAVELPAALAEQLNAAGLSADAATATGGLAVAIWTTTPWTLPA 265

Query: 113 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 172
           N AV+VN +L YA+  +    +GD+AAPA                 ++VA++L  +LE  
Sbjct: 266 NLAVSVNERLDYAICAVAP--QGDNAAPAVS--------------HLVVAAELRESLETS 309

Query: 173 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 232
            G  L    ++ G+ LE   Y HP+  R   VVIGGDYITTE+GTGLVHTAPGHG +D+ 
Sbjct: 310 LGLALTPLLSVKGAALEGIVYRHPLLERTSQVVIGGDYITTEAGTGLVHTAPGHGVDDFN 369

Query: 233 TSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           T  KYGLP+L PVD+ G  T EAG F+G +VL D N  +++ L+    L+ +E YEH+YP
Sbjct: 370 TGKKYGLPVLCPVDEAGNLTAEAGPFAGTNVLKDANPTILEALEGTGLLLKQERYEHRYP 429

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTKKPTIFRATEQWFASVEGFR AA++AI QV W+P
Sbjct: 430 YDWRTKKPTIFRATEQWFASVEGFRAAALEAIAQVDWLP 468



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 141/340 (41%), Positives = 210/340 (61%), Gaps = 23/340 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 656 KQEPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFNPATD 715

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y +LP++DQ+ L +   ++ ++   +E ++F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 716 AVPYAELPLLDQWMLQRTAALIDSVSGDFERFEFYRFFQALQNFCVVDLSNVYLDIAKDR 775

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY  G   F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP++       A   VF
Sbjct: 776 LYVSGAADFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSV------AERSVF 829

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E  WP    +WR   +      G+ILELR  VN+ LE  R+G  +G+SLEA+V L   + 
Sbjct: 830 ERGWPTAPAEWRRSELEAPM--GRILELRALVNRQLESCRSGGQLGASLEAQVQLELGEG 887

Query: 572 --SLASRLREMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD-KV 627
             + A  L+ + ++ H   D L    ++S ++   S P           E L E  +  +
Sbjct: 888 AEATAQALQWLKSSAHPTVDNLADWLLVSALQQGGSAP----------AEVLAEASEGGL 937

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + +++A G KCERCW+Y T +G    HP+LC RC  VL+
Sbjct: 938 QVRIAKAAGEKCERCWHYETDIGQHSAHPSLCGRCVTVLS 977


>gi|116072087|ref|ZP_01469355.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065710|gb|EAU71468.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 973

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 234/342 (68%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW+ PYL+L  EYEAAQI VFG M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MKGFQRWGIWADWDQPYLSLQKEYEAAQIGVFGDMVLKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE---FLP----DLG----LAVWTTTPWT 109
           AELEYP+GH+S S+YA F  V  P +    L +    LP    +LG    +A+WTTTPWT
Sbjct: 209 AELEYPDGHISPSVYAAFPAVELPAALRDALQKEGIVLPSEAEELGNAFHVAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+ +             N   R            ++VA+DL+ +L
Sbjct: 269 LPANLAVSVNERLDYALAD-------------NGNGR-----------LLLVAADLIESL 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
               G  L  K T+ GS L    Y HP+ +R  PVVIGG+YITTESGTGLVHTAPGHG +
Sbjct: 305 SKTLGLPLTQKATVKGSLLAGLIYRHPLLDRTSPVVIGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+GLP+L PVD+ G  T+EAG F+GL+VL D N A+++ L++  +L+  EPY H
Sbjct: 365 DFHTGQKHGLPVLCPVDEAGTLTDEAGAFAGLNVLKDANPAIIEALEKADALLKHEPYGH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASV+GFR  A++AI +V W P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASVDGFRDQALNAIDKVNWTP 466



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 206/340 (60%), Gaps = 27/340 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQDPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFDPSRD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I   +LP++D++ L +   ++ +I  ++ESY+F++ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 AIPVSELPLLDRWMLQRSAEVMDDINAAFESYEFYRFFQLLQNYCVSDLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQN+P+        A   VF
Sbjct: 767 LYVSAPGDRRRRSCQTVMALIIERLAGMIAPVLCHMAEDIWQNIPYPV------AHTSVF 820

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           ++ WP +   WR    T PV ++       +LRT VNKVLE  R  + +G+SLEA V L 
Sbjct: 821 QNGWPSVPADWRDPALTSPVQQLR------QLRTAVNKVLEDCRNQQELGASLEAAVRLE 874

Query: 568 TDDASLASRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                L + L+ +      + D L+   ++SQ++         I   P++     +  ++
Sbjct: 875 AHSPELIAALQWLDEHGDAEVDGLRDWLLVSQLQ---------IGGEPWAELLASQDNEQ 925

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V+ A GSKC RCW+Y   VG   +HP LC RC EVL
Sbjct: 926 ALIEVAHARGSKCSRCWHYEADVGQHSDHPDLCGRCIEVL 965


>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 968

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 182/345 (52%), Positives = 231/345 (66%), Gaps = 41/345 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW+ PYLTL  EYEAAQI+VFG+M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MKGFQRWGIWADWDQPYLTLQKEYEAAQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP--------------PSTSGLLNEFLPDLGLAVWTTT 106
           AELEYP+GH S S+Y  F  V  P              P+ +  L + L    +A+WTTT
Sbjct: 209 AELEYPDGHTSPSVYVAFPAVEVPVPLRETLQSHGVELPADAAALGQALQ---VAIWTTT 265

Query: 107 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 166
           PWT+PAN AV+VN +L YA+V+                        D     ++VA++L+
Sbjct: 266 PWTLPANLAVSVNERLDYALVD------------------------DGNGRLLVVAAELI 301

Query: 167 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 226
            +L       L  + T+ G+ L    Y HP+ +R  PVVIGGDYITTESGTGLVHTAPGH
Sbjct: 302 ESLSKTLERPLQQRATVKGALLAGLVYRHPLLDRTSPVVIGGDYITTESGTGLVHTAPGH 361

Query: 227 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 286
           G +D+ T  K+GLP+L PVD+ G  T EAG F+GL+VL D N  +++ L++  +L+ +E 
Sbjct: 362 GVDDFHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPGIIEALEQAGALLKQEA 421

Query: 287 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI QV+W P
Sbjct: 422 YSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWTP 466



 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 213/337 (63%), Gaps = 19/337 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSTDVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+ +DLP++D++ L +   ++  I E++ESY+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAVEDLPLLDRWMLQRTAEVMDEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 767 LYVSAPADRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +  WP   ++WR   + E     ++ ELRT VNKVLE  R+   +G+SLEA V L   + 
Sbjct: 821 QRGWPTAPDRWRDASLNEPM--QQLRELRTSVNKVLEDCRSRGELGASLEAAVRLEAHNP 878

Query: 572 SLASRLREMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           SL S L+ +    H + D L+   ++SQ++         I   P++        D   I 
Sbjct: 879 SLQSALQWLNDQGHAEVDGLRDWLLVSQLQ---------IGGEPWAELLANHDDDVALIE 929

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V+RA GSKCERCW+Y + VG   +HP LC RC  VL 
Sbjct: 930 VARARGSKCERCWHYESDVGQHADHPHLCGRCVSVLG 966


>gi|412990009|emb|CCO20651.1| isoleucyl-tRNA synthetase [Bathycoccus prasinos]
          Length = 1057

 Score =  364 bits (935), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 194/413 (46%), Positives = 259/413 (62%), Gaps = 61/413 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYG+W ++ NPY+TL P YEA+Q+EVFG+M L G+IYRGKKPVHWSPSS+TALAEAEL
Sbjct: 204 FQRYGIWGEFENPYMTLQPAYEASQLEVFGKMFLNGHIYRGKKPVHWSPSSQTALAEAEL 263

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP------DLGLAVWTTTPWTVPANAAVA 117
           EYP+ HVS+S+Y  F + +     + + +E L        L LAVWTTTPWT+PANAAVA
Sbjct: 264 EYPDVHVSQSVYVAFPIEATLEGANAIKDETLKSTLLDGSLKLAVWTTTPWTMPANAAVA 323

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           +N KL+Y V +                       K +K   I+VA+DLV +L       L
Sbjct: 324 MNPKLEYRVCD----------------------FKGEK---IVVANDLVASLSETLEDTL 358

Query: 178 VI--KKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
               +    G+++E   Y HP + +R  PV++GGDYITT++GTGLVHTAPGHGQ+DY+  
Sbjct: 359 TALGESPFLGAEMEGLTYQHPTIKDRVNPVIVGGDYITTDAGTGLVHTAPGHGQDDYIAG 418

Query: 235 LKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           LKY LP+ SPVDD G FTEEAG +  GL+VLGDGN   ++ L    +L+  EPYEHKYPY
Sbjct: 419 LKYNLPLHSPVDDLGNFTEEAGSELFGLNVLGDGNEKCIEQLQAANALLKREPYEHKYPY 478

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSS---- 349
           DWRTKKPTIFRATEQWF SVEGFR  A+ A+  VK++P       G+  +R  VS     
Sbjct: 479 DWRTKKPTIFRATEQWFCSVEGFRDDALKALDSVKFIPES-----GSKRMRPMVSGRSDW 533

Query: 350 ----------------VDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHD 386
                            + T +V++   +++ ++DI RK  GT  + + ++ +
Sbjct: 534 CISRQRSWGVPIPCFFFEETNEVLMDESIIKHVTDIVRK-EGTDAWFMKDIEE 585



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 193/354 (54%), Gaps = 33/354 (9%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
            PGYGAD LRLWV+S DY  DV IG  V++Q S+ YRK+RGTLR+L+G  +D++   ++I+
Sbjct: 699  PGYGADTLRLWVASTDYNSDVSIGSNVIKQTSENYRKIRGTLRFLMGVENDFKSKEHAIA 758

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D LP  DQY L++LE  +K I  +Y++Y F  +   I  F    LSN Y DV+KDRLY 
Sbjct: 759  FDQLPGFDQYCLYRLEETMKKIEIAYDNYNFAAVNSEINAFTTF-LSNVYLDVSKDRLYL 817

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE----FV 510
            G  +   RR+ QTV+   + +++  +APILPH AE+       A+   D  A E     V
Sbjct: 818  GHPSDAKRRAAQTVVHELITNLLAALAPILPHTAEE-------AFLARDTVAKEDKQISV 870

Query: 511  FESKWPVLDEKWRTFPV---GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            F   WP   +      +    +   W  +++LR+  N  +E AR  KL+G+SLE  + +F
Sbjct: 871  FLQGWPTKKKNSNNNSIMSQADAKNWEALIDLRSVANLAIEDARNSKLVGASLETSIKVF 930

Query: 568  TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI--PYSGEYLVEGKD 625
             +D + +  L+   T +H    L+ +FI S+V +  +  +   +      S E   +  D
Sbjct: 931  AEDETFSRFLK---TNEH---FLKEMFICSEVTLCATLSDYEKKEDREEESKEVFSKSGD 984

Query: 626  ------KVWIGVSRAEGSKCERCWNYSTQVGSF--VEHPTLCSRCYE-VLAVQP 670
                  K++   S+A G KC RCW YS  +G+    +HP LC RC   VL V P
Sbjct: 985  SDACAGKLFAAASKASGEKCLRCWCYSNALGTTDAKKHPKLCERCGPIVLDVAP 1038


>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 990

 Score =  364 bits (935), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 186/345 (53%), Positives = 229/345 (66%), Gaps = 35/345 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R+G+WADW  PYLTL   YEAAQI VFG M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 145 AGFQRWGIWADWEQPYLTLQKSYEAAQIGVFGAMVLAGHIYRGLKPVHWSPSSRTALAEA 204

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---------------LGLAVWTTT 106
           ELEYP+GH S S+Y  F + + P   +  L     +               L +A+WTTT
Sbjct: 205 ELEYPDGHTSPSVYVAFPVEAVPSVLASRLRAVGIEVEDSGQMGGHRRPITLSMAIWTTT 264

Query: 107 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 166
           PWT+PAN A++VN KL Y++ E+                  G+ L +     ++VA++LV
Sbjct: 265 PWTLPANLAISVNGKLDYSICEVNG----------------GDSLSNH----LVVATELV 304

Query: 167 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 226
            TLE   G  L    +L G +LE   Y HP+  R+  VVIGGDYITTE+GTGLVHTAPGH
Sbjct: 305 ATLEQTLGLTLKPLLSLKGEELEGSVYRHPLLERRGQVVIGGDYITTEAGTGLVHTAPGH 364

Query: 227 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 286
           G +D+ T  KYGLP+L PVD+ G  TEEAG F+G +VL D N  +V  L E   LI E+ 
Sbjct: 365 GVDDFNTGRKYGLPVLCPVDEAGTLTEEAGPFAGTNVLKDANPTIVAALREAGVLISEQR 424

Query: 287 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YEH+YPYDWRTKKPTIFRATEQWFASVEGFRQAA++AI +V+W+P
Sbjct: 425 YEHRYPYDWRTKKPTIFRATEQWFASVEGFRQAALEAIARVEWLP 469



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 144/350 (41%), Positives = 204/350 (58%), Gaps = 23/350 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV--- 389
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+     
Sbjct: 649 KQEPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPRPA 708

Query: 390 ---GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 446
              G++I  ++LP++DQ+ L +   +V  +   +  Y+F++ FQ +Q F +VDLSN Y D
Sbjct: 709 AAGGHAIPLEELPLLDQWMLQRTAALVDAVSGDFGRYEFYRFFQALQNFCVVDLSNVYLD 768

Query: 447 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA 506
           +AKDRLY      F RRSCQTVLS  +  +  +IAP+L H+AED+WQNLP+        A
Sbjct: 769 IAKDRLYVSAAGDFRRRSCQTVLSLVVERLAGLIAPVLCHMAEDIWQNLPYPV------A 822

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVART---GKLIGSSLEAK 563
              VFE  WP     WR  P  E    G+ILELR  VN+ LE  R    G+ IG++LEA+
Sbjct: 823 EASVFERGWPTAPAAWRQ-PELEPPM-GRILELRALVNRQLEACRKQAGGEGIGAALEAQ 880

Query: 564 VYLFTDDASLASRLREM-----CTAKHDADTLQRIFIISQVEVLPSTPNGLI-RNIPYSG 617
           V L        + LRE         +   D L    ++S +         +     P  G
Sbjct: 881 VQLVISGDPRTAPLREALAWLSANGRPGVDDLADWLLVSGLSCRVDGAGAVAPEREPAEG 940

Query: 618 EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                 ++ + + ++RAEG KCERCW+Y+T +G+   HP+LC RC  VL+
Sbjct: 941 MLAETEENGLTVRIARAEGDKCERCWHYTTDIGTSSAHPSLCGRCLAVLS 990


>gi|254423822|ref|ZP_05037540.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191311|gb|EDX86275.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 963

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 184/334 (55%), Positives = 223/334 (66%), Gaps = 27/334 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+RYGVW DW++PY+TL PEYEAAQ+ VFG+M   GYIYRG + VHWSPSS+TALAEAEL
Sbjct: 133 FQRYGVWGDWDHPYMTLLPEYEAAQLGVFGKMVENGYIYRGLRSVHWSPSSQTALAEAEL 192

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPE H+S SIY  F +V+A  S    L  +L  LG+AVWTTTPWT+PAN AVAVNA L 
Sbjct: 193 EYPEDHISPSIYLAFPVVTASESAQSALAPYLDSLGVAVWTTTPWTIPANVAVAVNADLT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV                KS  G   +     ++IVA DL   L   +GT L I   +
Sbjct: 253 YAVV----------------KSESGEPFE-----YLIVAKDLAEKLSDLFGTGLQIVGEI 291

Query: 184 AGSDLENCRYVHPVDNRQC------PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            G  L    Y HP+  ++       P+VIGGDYITTESGTGLVHTAPGHGQED+    + 
Sbjct: 292 KGESLAGSTYRHPLATKEAAFDRISPIVIGGDYITTESGTGLVHTAPGHGQEDFAVGQRE 351

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            LPIL PVD+ G FT EAG   GL+VL   N  +++ L E+  L+  EPY HKYPYDWRT
Sbjct: 352 ELPILCPVDERGNFTAEAGSLEGLNVLKTANDVLIEVLTEEKVLLKHEPYNHKYPYDWRT 411

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KKP I+RATEQWFASV+GF   A++AI +V+W+P
Sbjct: 412 KKPVIYRATEQWFASVKGFVGDAINAINEVEWIP 445



 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 226/350 (64%), Gaps = 30/350 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+GD+ +G + ++QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQEPPYGADVLRLWVSSVDYSGDMRLGMRNVKQMSDVYRKIRNTARFLLGNLHDFDPSRD 685

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+Y+ LP +DQY L ++  +  +++ ++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 AIAYEQLPDLDQYMLHRMTEVFADVKTAFESYQFFQFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVLS  + S+ + IAP+L H+AED+WQ LP+    E GS  E VF
Sbjct: 746 LYISSANSARRRSCQTVLSVAIESLAKAIAPVLSHMAEDIWQALPY----EAGS--ESVF 799

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  + E W+   + E   W ++  +R E N VLE ART K IGSSLEAK+ L+T+D 
Sbjct: 800 ESGWVQMKEDWQRPDLVEK--WQQLRTIRDEANVVLEQARTDKAIGSSLEAKLLLYTNDD 857

Query: 572 SLASRLREMCTA--------------KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSG 617
            L + L +M +A               +  D L+ +F++SQVE+L S       +     
Sbjct: 858 ILRNTLMDMNSADSLTAYSTAPSTPQSNHVDELRYLFLVSQVELLDSL------DQLTGA 911

Query: 618 EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +Y VE  + + IGV  A+G KC+RCWNYST VG   E PT+C RC   L+
Sbjct: 912 KYQVE-VNGLTIGVVNADGEKCDRCWNYSTHVGESSEDPTICDRCVAALS 960


>gi|395836198|ref|XP_003791049.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Otolemur
           garnettii]
          Length = 801

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 337/681 (49%), Gaps = 93/681 (13%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFMRWGIMADWNNCYYTFDAKYEAKQLRIFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRS+Y  F ++   P  + LL+   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSVYVKFPLLKPSPKLASLLDSSSP-VNILVWTTQPWTIPANQAVCYMPQ 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV+  S   GD                       I+A+D V ++ +   T      
Sbjct: 316 SKYAVVKCTS--SGD---------------------LYILAADKVTSVASALETTFETVS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE+    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + +Y L  
Sbjct: 353 TFSGVDLEDGTCSHPLIPDKVSPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQYNLST 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    + + EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNFLKEEKVVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGP 360
            I RA++QWF ++   +  A + + +VK++P           L   V  +D         
Sbjct: 473 VIIRASKQWFVNITDIKTTAKELLKKVKFIP--------GSSLNAMVEMID--------- 515

Query: 361 QVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRES 419
                        R TLR+LLGN+ D+    +SI   ++ +IDQY L  L+++   + ES
Sbjct: 516 -------------RNTLRFLLGNVTDFNPETDSIPVKNMYVIDQYMLHLLQDLANKVTES 562

Query: 420 YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRV 479
           Y  Y F K+ ++++ F   +LSNFYF + KDRLY        RRSCQT L   L  +VR 
Sbjct: 563 YRRYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCENENDPKRRSCQTALVEILDVVVRS 622

Query: 480 IAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKI-LE 538
            APILPHLAE+V+Q++P           + VF + W           +     W K  LE
Sbjct: 623 FAPILPHLAEEVFQHMPHV------KEPKSVFRTGW-----------ISRSSIWKKPGLE 665

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADT--LQRIFII 596
                   +  +  G + G +      +   +  L   + EM  A+  + T  L  + + 
Sbjct: 666 EAVHGACAMRDSFLGSIPGKNAAEYKVIIVIEPGLLFEIIEMLQAEETSSTSQLAELMMA 725

Query: 597 SQVEVLPSTPNGLIRN-IPYSGEYLV---------EGKDKVWIGVSRAEGSKCERCWNYS 646
           S+  +L   P  +  + I   G +L+         E   KV +  +  E  KC RCW Y+
Sbjct: 726 SETTLLTQEPREMTEDVIELKGTFLINLKGGDICEESSYKVIVMPTTKE--KCPRCWKYT 783

Query: 647 TQVGSFVEHPTLCSRCYEVLA 667
            +        TLC RC EV++
Sbjct: 784 AESSD-----TLCPRCAEVVS 799


>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81575298|sp|Q7U9G9.1|SYI_SYNPX RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 974

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 183/342 (53%), Positives = 229/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW  PYLTL  EYEAAQI+VFG+M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 150 MKGFQRWGIWADWEQPYLTLQKEYEAAQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAE 209

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP-PSTSGLLNEFLP----------DLGLAVWTTTPWT 109
           AELEYP+GH S S+Y  F  +  P P    L  E L            L +A+WTTTPWT
Sbjct: 210 AELEYPDGHTSPSVYVAFPAMEVPTPLRDALKAEGLELPTETDALRQALQVAIWTTTPWT 269

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+V+                        D     ++VA+DL+ +L
Sbjct: 270 LPANLAVSVNERLDYALVD------------------------DGSGRMLVVAADLIESL 305

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                  L  + T+ G+ L    Y HP+ +R  PVVIGG+YITTESGTGLVHTAPGHG +
Sbjct: 306 STTLERPLKHRATVKGALLAGLIYRHPLLDRTSPVVIGGEYITTESGTGLVHTAPGHGVD 365

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+GLP+L PVD+ G  T EAG F+GL+VL D N  +++ L++  +L+ +E Y H
Sbjct: 366 DFHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPGIIEALEQAGALLKQEAYSH 425

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI QV+W P
Sbjct: 426 RYPYDWRTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWTP 467



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 210/341 (61%), Gaps = 29/341 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPASD 707

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+  DLP++D++ L +   ++  I E++ESY+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIAVADLPLLDRWMLQRTAEVMHEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    T   RRSCQTV++  +  +   IAP+L H+AED+WQNLP  Y +++ S    VF
Sbjct: 768 LYVSAPTDQRRRSCQTVMALIIERLAGFIAPVLCHMAEDIWQNLP--YPVQETS----VF 821

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           +  WP +   WR    + PV ++       +LR  VNKVLE  R  + +G+SLEA V + 
Sbjct: 822 QRGWPTIPSDWRNDTLSAPVQQLR------DLRAAVNKVLEDCRGRQELGASLEAAVRID 875

Query: 568 TDDASLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                L + L  +      D D L+   ++SQ++         +   P++ E L   +D+
Sbjct: 876 ARSPELQAALSWLNDNGDPDVDGLRDWLLVSQLQ---------LGGEPWA-EVLSNHEDE 925

Query: 627 V-WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +  I VSRA G+KCERCW+Y   VG   +H  +C RC  VL
Sbjct: 926 LALIEVSRARGTKCERCWHYEGDVGQHPDHAHICGRCVGVL 966


>gi|145345247|ref|XP_001417128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577355|gb|ABO95421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 949

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 189/329 (57%), Positives = 230/329 (69%), Gaps = 24/329 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYG+WADW+ PY+TL PEYEAAQ+EVFG+M L G+IYRG+KPVHWSPSS TALAEAEL
Sbjct: 125 FKRYGIWADWDEPYMTLLPEYEAAQLEVFGKMFLNGHIYRGEKPVHWSPSSMTALAEAEL 184

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGHVS+SIY  F +   P ST   L   L    LAVWTTTPWT+PANAAVAVNAKL 
Sbjct: 185 EYPEGHVSQSIYVQFPVSDVPESTPSELKALLDGASLAVWTTTPWTMPANAAVAVNAKLD 244

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+V  ++S                           ++VA  L   + +K  T L    T 
Sbjct: 245 YSVCRVES-----------------------TGATLVVAEGLREAVASKLETTLTTLGTF 281

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G D EN +Y HP   R+ PV+IGG+YITTE+GTGLVHTAPGHGQ+DY++ +KYGLP+ S
Sbjct: 282 KGQDFENVQYQHPFYERKSPVIIGGEYITTEAGTGLVHTAPGHGQDDYISGMKYGLPLYS 341

Query: 244 PVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           PVD+ G FT EAG    G DVLGDGNV  ++ L    +L+ +E Y HKYPYDWRTKKPTI
Sbjct: 342 PVDNAGLFTAEAGSDLEGKDVLGDGNVLCIEKLTSAGALLKQEAYNHKYPYDWRTKKPTI 401

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFR+ A+  + +++++P
Sbjct: 402 FRATEQWFASVEGFREKALSELDKLEFIP 430



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 202/331 (61%), Gaps = 10/331 (3%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISY 395
           PGYGAD LRLWV+S DYTGDV IG  +++Q S+ YRKLRGT+R+L+G L D++    ++Y
Sbjct: 613 PGYGADTLRLWVASTDYTGDVSIGMNIIKQTSEAYRKLRGTIRFLMGVLDDFKPTEGVAY 672

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           + LP  ++Y L +L+  ++ I  SY+S+++ ++   I  F    LSN Y DV+KD+LY G
Sbjct: 673 ESLPAFEKYILSRLDATMQEIETSYKSHEYSRVVAAITSFTTF-LSNVYLDVSKDKLYIG 731

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 515
                 RR+CQTV+SA +  ++  IAP+ PH+AE+ +Q LP+    +    A  VF + W
Sbjct: 732 EQNDIKRRACQTVVSAIVERLIAAIAPLTPHMAEEAFQALPY----DKPGDAISVFIAGW 787

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P     W +    E+ FW   LE+R  VNKVLE +R  KL+G+SLEAK+ L   DA   +
Sbjct: 788 PSRPSTWASIDADEVKFWDSFLEIRDTVNKVLEDSRNAKLLGASLEAKITLHCSDADFVA 847

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
           RL     A+     L+ +FI+SQVEV+ S+ +       +     V G   V +GV+RA 
Sbjct: 848 RLNREEIARD----LRYLFIVSQVEVVTSS-DAATAGCDFKSIVDVPGAGTVSVGVARAS 902

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G+KC RCWN+S  VG   +H TLC RC  ++
Sbjct: 903 GAKCARCWNFSNLVGVDAKHATLCERCVPIV 933


>gi|260434590|ref|ZP_05788560.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412464|gb|EEX05760.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 974

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 182/342 (53%), Positives = 226/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW  PYLTL   YE+AQI VFG+M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 150 MKGFQRWGIWADWEQPYLTLQKGYESAQIRVFGEMVLKGHIYRGLKPVHWSPSSRTALAE 209

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPS------TSGL-----LNEFLPDLGLAVWTTTPWT 109
           AELEYP+GH S S+YA F  V  P +        GL     ++     L +A+WTTTPWT
Sbjct: 210 AELEYPDGHTSPSVYAAFPAVELPAALRDAFKAEGLDLPTEMDALGKALQVAIWTTTPWT 269

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+ +                        D     ++VA+DL+ TL
Sbjct: 270 LPANLAVSVNERLDYALAD------------------------DGAGRLLLVAADLIETL 305

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                  L  + T+ G+ L    Y HP+ +R  PVVIGGDYITTESGTGLVHTAPGHG +
Sbjct: 306 SGTLARPLSRRVTVKGALLAGLTYRHPLLDRSSPVVIGGDYITTESGTGLVHTAPGHGVD 365

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K GLP+L PVD+ G  TEEAG F+GL+VL D N  +++ L+   +L+ +E Y H
Sbjct: 366 DFHTGQKNGLPVLCPVDEAGNLTEEAGPFAGLNVLKDANPKIIEALESAGALLKQEAYGH 425

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI  V+W P
Sbjct: 426 RYPYDWRTKKPTIFRATEQWFASVEGFRQQALDAIAAVEWTP 467



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 209/340 (61%), Gaps = 27/340 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 707

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I   +LP++D++ L +   ++ +I E++ES++FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIPIAELPLLDRWMLQRTAEVMDDITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  YT+++ S    VF
Sbjct: 768 LYVSAPADQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YTVKETS----VF 821

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
              WP +  +WR    + PV E+       ELR  VNKVLE  R  + +G+SLEA V + 
Sbjct: 822 HRSWPKVPTEWRDAALSAPVQELR------ELRAAVNKVLEDCRGRQELGASLEAAVRID 875

Query: 568 TDDASLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                L + L  +  T   D D L+   ++SQ++         I   P++     +  + 
Sbjct: 876 ARRPELQAALSWLSETGDPDVDGLRDWLLVSQLQ---------IGGEPWAEVLASQDDEL 926

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I VSRA G+KCERCW+Y   VG   EHP +C RC  VL
Sbjct: 927 ASIEVSRARGTKCERCWHYEGDVGQHPEHPHICGRCVGVL 966


>gi|33239720|ref|NP_874662.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81665019|sp|Q7VDV0.1|SYI_PROMA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33237245|gb|AAP99314.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 969

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 181/343 (52%), Positives = 225/343 (65%), Gaps = 43/343 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+G+WADW+NPYLTL  EYEAAQI++FG+M+ +GYIYRG KPVHWSPSSRTALAEAEL
Sbjct: 152 FRRWGIWADWDNPYLTLQKEYEAAQIKLFGEMAFKGYIYRGLKPVHWSPSSRTALAEAEL 211

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA---------------VWTTTPW 108
           EYPEGH S SIY  F +V  P     LL E L   GLA               +WTTTPW
Sbjct: 212 EYPEGHTSPSIYVAFSVVKLP----NLLQESLSKQGLALPVHEDGLSNKLKVAIWTTTPW 267

Query: 109 TVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT 168
           T+PAN AVAVN  + Y +                         KD  +  +I+ASDL   
Sbjct: 268 TLPANMAVAVNENIDYIIA------------------------KDNSEKLLIIASDLREI 303

Query: 169 LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQ 228
           +  + G+ L     + G  L+   Y HP+ +   P V+GG+YITTESGTG+VHTAPGHG 
Sbjct: 304 VSEEIGSPLEKVAIVKGKMLDGVLYKHPLFDSLNPFVLGGNYITTESGTGIVHTAPGHGV 363

Query: 229 EDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
           +D+ T +KY LPI+ PVD++G FT EAG F GL+VL D N  ++  L E   L+ E+PY 
Sbjct: 364 DDFNTGMKYKLPIICPVDEKGFFTSEAGDFEGLNVLKDANTKIINALKESGCLLKEKPYI 423

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+++I +V+W+P
Sbjct: 424 HKYPYDWRTKKPTIFRATEQWFASVEGFRNDALNSIEKVEWLP 466



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 201/333 (60%), Gaps = 19/333 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L Q+SD+YRK+R T RYLLGNLHD+    + + 
Sbjct: 650 PAYGADVLRLWVSSVDYSVDVPIGNNILSQLSDVYRKVRNTARYLLGNLHDFDPAKDGLD 709

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             DLP++D++ L +  ++V  I  ++E Y+F K FQ++Q F +VDLSNFY D+AKDRLY 
Sbjct: 710 IGDLPILDRWMLNRTADVVDEISIAFERYEFSKFFQLLQSFCVVDLSNFYLDIAKDRLYV 769

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                F RRSCQ VLS  +  +  VI+P+L H AED+WQN+P+          E VF+  
Sbjct: 770 SAPNDFRRRSCQYVLSLIVERLAGVISPVLSHTAEDIWQNIPYKLN------EESVFQRY 823

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP + + WR     +     +I ELRT VN+ LE  RT + +GSSLEA V +   + SL 
Sbjct: 824 WPKVPDSWRDSSFNKPI--NQIRELRTSVNRALEDCRTRQELGSSLEASVRISPINESLQ 881

Query: 575 SRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           + L  +    H++ D L    I+S+V+         I   P++     +  D   I +++
Sbjct: 882 NSLTFLQENGHNSVDNLFDWLIVSKVQ---------IGGEPWAEVLFTKEDDIGVIEIAK 932

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + G+KCERCW+Y   +G +  HP LC RC +++
Sbjct: 933 SRGAKCERCWHYELDIGQYERHPLLCGRCVDII 965


>gi|78211836|ref|YP_380615.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196295|gb|ABB34060.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 974

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 181/342 (52%), Positives = 224/342 (65%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW  PYLTL  EYE+AQI VFG+M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 150 MKGFQRWGIWADWEQPYLTLQKEYESAQIRVFGEMVLKGHIYRGLKPVHWSPSSRTALAE 209

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL-----------GLAVWTTTPWT 109
           AELEYP+GH S S+YA F  V  P +    L     DL            +A+WTTTPWT
Sbjct: 210 AELEYPDGHTSPSVYAAFPAVELPEALRDSLKAEGLDLPTETDALGKALQVAIWTTTPWT 269

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+ +                        D     ++VA+DL+  L
Sbjct: 270 LPANLAVSVNERLDYALAD------------------------DGAGRLLLVAADLIEAL 305

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                  L  + T+ G+ L    Y HP+ +R  PVVIGGDYITTESGTGLVHTAPGHG +
Sbjct: 306 SGTLERPLSRRATVKGALLAGLTYRHPLLDRTSPVVIGGDYITTESGTGLVHTAPGHGVD 365

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K GLP+L PVD+ G  T+EAG F+GL+VL D N  +++ L+   +L+ +E Y H
Sbjct: 366 DFHTGQKNGLPVLCPVDEAGNLTDEAGPFAGLNVLQDANAKIIEALESAGALLKQEAYGH 425

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI  V+W P
Sbjct: 426 RYPYDWRTKKPTIFRATEQWFASVEGFRQQALDAIAAVEWTP 467



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 207/340 (60%), Gaps = 27/340 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 707

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I   +LP++D++ L +   ++  I E++ES++FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIPTAELPLLDRWMLQRTAEVMDEITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 768 LYVSAPQDQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 821

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
              WP +  +WR    + PV E+       ELR  VNKVLE  R  + +G+SLEA V + 
Sbjct: 822 HRGWPQIPAEWRDATLSAPVQELR------ELRAAVNKVLEDCRGRQELGASLEAAVRIE 875

Query: 568 TDDASLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                L + L  +  T   + D L+   ++SQ++         +   P++     +  + 
Sbjct: 876 AHRTELQAALSWLSETGDAEVDGLRDWLLVSQLQ---------LGGEPWAEVLASQDDEL 926

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I VSRA G+KCERCW+Y   VG   EHP +C RC  VL
Sbjct: 927 ASIEVSRARGTKCERCWHYEGDVGQHPEHPHICGRCVGVL 966


>gi|113953240|ref|YP_729567.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031893|sp|Q0IDA5.1|SYI_SYNS3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|113880591|gb|ABI45549.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 968

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 178/341 (52%), Positives = 228/341 (66%), Gaps = 35/341 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R+G+WADW++PYLTL  +YEAAQI+VFG M+L+G+IYRG KPVHWSPSSRTALAEA
Sbjct: 150 AGFQRWGIWADWDHPYLTLQKDYEAAQIDVFGTMALKGHIYRGLKPVHWSPSSRTALAEA 209

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-----------LGLAVWTTTPWTV 110
           ELEYP+GH S S+Y  F +V  P S    LN    D           L +A+WTTTPWT+
Sbjct: 210 ELEYPDGHTSPSVYVGFPVVDLPESLRSKLNAQGLDVPAASDTLSQCLQVAIWTTTPWTL 269

Query: 111 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 170
           PAN AV+VN +L Y + +                        D     +IVA++L  ++ 
Sbjct: 270 PANLAVSVNDRLDYCLAD------------------------DGNGQLLIVAAELCDSIA 305

Query: 171 AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 230
           +K    L  K T+ G+DL    Y HP+  R+  +V+GG+YITTESGTGLVHTAPGHG +D
Sbjct: 306 SKLERPLQAKATVKGADLAGITYSHPLLERRSAIVVGGEYITTESGTGLVHTAPGHGVDD 365

Query: 231 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           + T  K+GLP+L PVD+ G  T EAG F GL+VL D N  ++  L++  SL+++E Y H+
Sbjct: 366 FNTGRKHGLPVLCPVDEAGTLTAEAGPFEGLNVLKDANAKIIAALEDSGSLLLQESYSHR 425

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 426 YPYDWRTKKPTIFRATEQWFASVEGFRTEALTAIDGVQWLP 466



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 142/336 (42%), Positives = 205/336 (61%), Gaps = 19/336 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ+SD+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFIPSRD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +IS  DLP++D++ L +   ++  I E++E Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AISISDLPLLDRWMLQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQN+P+       +  E VF
Sbjct: 767 LYVSAPNDKRRRSCQTVMALIIERLAAAIAPVLCHMAEDIWQNIPYP------TGTESVF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            S WP + E+WR   + +     ++ ELR  VNKVLE  R+ + +GSSLEA V L     
Sbjct: 821 LSGWPSVPEEWRDDSLRDPM--QELRELRAAVNKVLEECRSKRKLGSSLEAAVRLEARTP 878

Query: 572 SLASRLREM-CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           +L   L+ +      + D L+   ++SQ++         I   P++     +  +   I 
Sbjct: 879 ALQDALQWLQSKGDQEVDGLRDWLLVSQLQ---------IGGEPWAELLASDDNELAVIE 929

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V+ + G KCERCW+Y   +G + +HP LC RC  VL
Sbjct: 930 VALSRGQKCERCWHYEADIGQYSDHPGLCGRCVSVL 965


>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 1370

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 183/342 (53%), Positives = 227/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA F+R+GVWADW +PYLTL  EYEAAQI+VFG M  +GYIYRG KPVHWSPSSRTALAE
Sbjct: 551 MAGFRRWGVWADWEHPYLTLQKEYEAAQIQVFGTMFQKGYIYRGLKPVHWSPSSRTALAE 610

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPS-TSGLLNEFL--PDLGL--------AVWTTTPWT 109
           AELEYP+GH S S+YA F     P S  + L N+ L  P  GL        A+WTTTPWT
Sbjct: 611 AELEYPDGHTSPSVYAAFPAAKLPESLRTSLSNQGLELPKNGLELGQALQIAIWTTTPWT 670

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN KL Y+                           D +   ++VA++L+P+L
Sbjct: 671 LPANLAVSVNEKLDYSFA------------------------VDNQGRLLLVAAELLPSL 706

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                 +L  + T+ G+ L    Y HP+ +R  P+VIGG+YITTESGTGLVHTAPGHG +
Sbjct: 707 RDTLALELTARATVKGALLAGLIYKHPLLDRDSPIVIGGEYITTESGTGLVHTAPGHGVD 766

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K  L +L PVD+ G  T EAG F+GL+VL D N  ++  L+E+ +L+  EPY H
Sbjct: 767 DFNTGKKNDLGMLCPVDESGTMTSEAGPFAGLNVLKDANPTIIAALEERGALLKHEPYAH 826

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 827 RYPYDWRTKKPTIFRATEQWFASVEGFRNEALTAINSVEWLP 868



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 205/339 (60%), Gaps = 19/339 (5%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
            ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 1049 KQEPPYGADVLRLWVSSVDYSADVPIGTSILRQIADVYRKVRNTSRYLLGNLHDFDPERD 1108

Query: 392  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +I+  +LP++D++ L +   ++  I  +++ Y+F++ FQ++Q + +VDLSNFY D+AKDR
Sbjct: 1109 AIAVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDR 1168

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY    +   RRSCQTV++  +  +   I+P+L H+AED+WQNLP++       A + VF
Sbjct: 1169 LYVSSPSERRRRSCQTVMALIIERLAGAISPVLCHMAEDIWQNLPYSV------AEDSVF 1222

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
               WP + E WR   +  +    ++ ELR+ VN+VLE  R+   +G++LEA V L     
Sbjct: 1223 RRGWPTVPETWRDPSM--MSPMHQLRELRSAVNRVLEDCRSQGELGAALEAAVRLEAHSE 1280

Query: 572  SLASRLREM-CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            +L   L  +      D D L+   ++S ++V            P++     +      I 
Sbjct: 1281 ALQDALDWLRQQGDPDVDGLRDWLLVSHLQV---------GGEPWAELLASQDNALATIE 1331

Query: 631  VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
            V++A GSKCERCW+Y T VG    HPTLC RC  VL  Q
Sbjct: 1332 VAKARGSKCERCWHYETDVGQHTTHPTLCGRCVGVLEHQ 1370


>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 973

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 227/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW+ PYL+L  +YEAAQI VFG M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MKGFQRWGIWADWDQPYLSLQKDYEAAQIRVFGDMVLKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPP------STSGLL-----NEFLPDLGLAVWTTTPWT 109
           AELEYP+GH S S+YA F  V  P        T G++      E    L +A+WTTTPWT
Sbjct: 209 AELEYPDGHTSPSVYATFPAVELPAVLRDALQTDGIVLPSQAEELGKTLHVAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+ +                        D     ++VA++L+ +L
Sbjct: 269 LPANLAVSVNERLDYALAD------------------------DGSGRLLLVAAELIESL 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                  L  K T+ G+ L    Y HP+ +R  P+VIGG+YITTESGTGLVHTAPGHG +
Sbjct: 305 SGTLALPLKRKATVKGALLAGLIYRHPLLDRTSPIVIGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K GLP+L PVD+ G  TEEAG F+GL+VL D N A+++ L +  +L+  EPY H
Sbjct: 365 DFHTGQKNGLPVLCPVDEAGTLTEEAGPFAGLNVLKDANPAIIEALQQADALLKHEPYGH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFAS++GFR  A+DAI +V W P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASIDGFRDDALDAIDKVNWTP 466



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/340 (40%), Positives = 205/340 (60%), Gaps = 27/340 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQDPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPSRD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I   +LP++D++ L +   ++ +I  ++E+++F++ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 GIPVHELPLLDRWMLQRSAEVMDDINAAFENFEFYRFFQLLQNYCVSDLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP+        A   VF
Sbjct: 767 LYVSAPDDRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLPYPV------AHTSVF 820

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           ++ WP +   WR    T PV ++       +LRT VNKVLE  R  + +G+SLEA V L 
Sbjct: 821 QNGWPSVPADWRDPALTAPVQQLR------QLRTAVNKVLEDCRNQQELGASLEAAVRLE 874

Query: 568 TDDASLASRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                L + L+ +      + D L+   ++SQ++         I   P++     +  ++
Sbjct: 875 AHSPELQTALQWLDEHGDAEVDGLRDWLLVSQLQ---------IGGEPWAELLASQDNEQ 925

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V+ A GSKC RCW+Y   VG   +HP LC RC EVL
Sbjct: 926 ALIEVAHARGSKCSRCWHYEADVGQHTDHPDLCGRCIEVL 965


>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 959

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 182/330 (55%), Positives = 228/330 (69%), Gaps = 29/330 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+G+W +W+ PYLTL   YEA+QI+VFG+M L G+IYRG KPVHWSPSSRTALAEAEL
Sbjct: 145 FRRWGIWGEWDIPYLTLQKRYEASQIDVFGRMVLAGHIYRGLKPVHWSPSSRTALAEAEL 204

Query: 64  EYPEGHVSRSIYAVF--RMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EYP+GH S S++  F    +S+  + +G+  E    L +A+WTTTPWT+PAN AVAVN +
Sbjct: 205 EYPDGHTSPSVFVAFPVEQLSSALAEAGVSCE---GLAVAIWTTTPWTLPANLAVAVNGR 261

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L Y++ +                S  G  L        IVASDLV +L  +   KL   +
Sbjct: 262 LDYSICQ----------------SSSGGQL--------IVASDLVESLSQQLELKLKPLQ 297

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G  LE   Y HP+  R  PVVIGGDYITTE+GTGLVHTAPGHG +D+ T  KY LP+
Sbjct: 298 QVKGEALEGLTYRHPLLERSSPVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKYDLPV 357

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD+ G  TEEAG F+GL+VL D N A++  L E  +L+ EE YEH+YPYDWRTKKPT
Sbjct: 358 LCPVDEGGWLTEEAGPFAGLNVLKDANTAIISALQEAKALLAEERYEHRYPYDWRTKKPT 417

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFASVEGFR++A+ AI  V+W+P
Sbjct: 418 IFRATEQWFASVEGFRESALSAIDSVEWLP 447



 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 202/336 (60%), Gaps = 21/336 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 633 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSRD 692

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++   DLP++D++ L +   I++ +   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 693 AVPLADLPLLDRWMLQRTAKILEEVSGDFERYEFYRFFQTLQNFCVVDLSNVYLDIAKDR 752

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     SF RRSCQTV++  L  +  +IAP+L H+AED+WQ+LP  Y++E+ S    VF
Sbjct: 753 LYVSAADSFRRRSCQTVMALVLERLAGMIAPVLSHMAEDIWQHLP--YSVEEAS----VF 806

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
              WP  D  W      E       ++LR  +N+ LE  R+   +G+SLEA V L     
Sbjct: 807 LRGWPQADASWSGLSSAESEAIDAAVQLRALLNRQLESCRSNGDLGASLEAAVQLELGAG 866

Query: 572 SLASRLR----EMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            LA  L+    ++  + H + D L    +ISQ+++    P   +  I   G         
Sbjct: 867 PLADALQRALEQLQASPHPEVDNLADWLLISQLQLGGQPPESPLAEITEEG--------- 917

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           V + +S+A G KC RCW+Y T +GS  EHP +C RC
Sbjct: 918 VTLRISKAAGEKCARCWHYETDIGSNAEHPEICGRC 953


>gi|427703156|ref|YP_007046378.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
 gi|427346324|gb|AFY29037.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
          Length = 983

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 182/340 (53%), Positives = 227/340 (66%), Gaps = 29/340 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+R+G+WADW+ PYLTL   YEAAQI VFG+M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 143 SGFRRWGIWADWDEPYLTLQKSYEAAQIGVFGKMVLAGHIYRGLKPVHWSPSSRTALAEA 202

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE----------FLPDLGLAVWTTTPWTVP 111
           ELEYP+GH S S+Y  F +V  P   +GLL +              L +A+WTTTPWT+P
Sbjct: 203 ELEYPDGHTSPSVYVAFPVVDLPAPLAGLLADAGIAGPTDAAHREQLFVAIWTTTPWTLP 262

Query: 112 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 171
           AN AV+VN +L YA+                   R G       + +++VA+ LV  L  
Sbjct: 263 ANLAVSVNGQLDYAIC------------------RDGTTNGGTPR-YLVVAAQLVDQLRT 303

Query: 172 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
                L    TL G+ LE  +Y HP+ +R  PVVIGGDYITTE+GTGLVHTAPGHG +D+
Sbjct: 304 SLERPLEPLLTLKGAQLEGIQYRHPLLDRTSPVVIGGDYITTETGTGLVHTAPGHGVDDF 363

Query: 232 VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            T  KYGLP+L PVD+ G  T EAG F+GL+VL D N A++  L +   L+ E+ YEH+Y
Sbjct: 364 HTGNKYGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPAIITALRDAGLLLAEQRYEHRY 423

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKPTIFRATEQWFASV+GFR  A++AI  V+W+P
Sbjct: 424 PYDWRTKKPTIFRATEQWFASVDGFRAQALEAIAVVEWLP 463



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 139/352 (39%), Positives = 208/352 (59%), Gaps = 31/352 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGN 391
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 643 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFVPAEH 702

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++ +DLP++D++ L +  ++++ +   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 703 AVAIEDLPLLDRWMLQRTASLIEAVNADFERYEFYRFFQALQNFCVVDLSNVYLDIAKDR 762

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTVL   +  +  +IAP+L H+AED+WQNLP+        A   VF
Sbjct: 763 LYVSAAGDVRRRSCQTVLHLVVERLAGLIAPVLCHMAEDIWQNLPYPV------AEASVF 816

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL----- 566
           E  WP + E W    +  +    +ILELR +VN++LE  R    +G+SLEA+V L     
Sbjct: 817 ERGWPTVPESWAAPEL--LAPMQRILELRAQVNRLLEGCRGRGELGASLEAQVQLELLKP 874

Query: 567 ----FTDDASLASRLREM-----CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSG 617
                 D A  A+ L E       +   + D L    ++S + V  S P           
Sbjct: 875 TSDTAADAAPEATSLPEALALVEASPHPEVDNLADWLLVSALRVGGSPPA--------EA 926

Query: 618 EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
                 ++ V + ++RA G+KCERCW++ + +G   +HP+LC RC EVL  Q
Sbjct: 927 LLAETEEEGVRVRIARAAGTKCERCWHHESDIGQHPDHPSLCGRCVEVLQRQ 978


>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 968

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 227/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+G+WADW  PYLTL  EYEAAQI+VFG+M L+G+IYRG KPVHWSPSSRTALAE
Sbjct: 149 MKGFQRWGIWADWEQPYLTLQKEYEAAQIKVFGEMVLKGHIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN--------EFLP---DLGLAVWTTTPWT 109
           AELEYP+GH S S+Y  F +   P +    L         E  P    L +A+WTTTPWT
Sbjct: 209 AELEYPDGHTSPSVYVAFPVEELPKALRDTLKGDGIDLPTEAAPLGDALQVAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN +L YA+V+                        D +   ++VA+DL+ +L
Sbjct: 269 LPANLAVSVNERLDYALVD------------------------DGEGRMLVVAADLIESL 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                  L  + T+ G+ L    Y HP+ +R   VVIGG+YITTESGTGLVHTAPGHG +
Sbjct: 305 SKTLERPLKRRATVKGAQLAGLTYRHPLLDRTSAVVIGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  KYGLP+L PVD+ G  T EAG F GL+VL D N  +++ L++  +L+ +E Y H
Sbjct: 365 DFHTGQKYGLPVLCPVDEAGTLTAEAGPFKGLNVLKDANPVIIEALEQAGALLKQEAYGH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFRQ A++AI  V+W P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASVEGFRQQALEAIDHVQWTP 466



 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 213/337 (63%), Gaps = 21/337 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P +GADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPPFGADVLRLWVSSVDYSADVPIGAGILRQIADVYRKVRNTSRYLLGNLHDFSPERD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+  DLP++D++ L +   ++  I ES+E+Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAVADLPLLDRWMLQRTAEVMDEITESFENYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    +   RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 767 LYVSAPSDQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           +  WP   + WR   V E     ++ ELR  VNKVLE  R+ + +G+SLEA V L     
Sbjct: 821 QRGWPTAPDSWRDASVQEPM--QQLRELRASVNKVLEDCRSRQELGASLEASVRLEAHSP 878

Query: 572 SLASRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV-WI 629
           SL S L  +    + + D L+   ++SQ++         I   P++ E L    D V  I
Sbjct: 879 SLQSALHWLNENGQPEVDGLRDWLLVSQLQ---------IGGEPWA-ELLANHDDSVALI 928

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V+RA G+KCERCW+Y + VG   +HP LC RC  VL
Sbjct: 929 EVARARGTKCERCWHYESDVGQHADHPHLCGRCVSVL 965


>gi|33864084|ref|NP_895644.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81573102|sp|Q7TUN3.1|SYI_PROMM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33635668|emb|CAE21992.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 968

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 228/342 (66%), Gaps = 35/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA F+R+G+WADW +PYLTL  EYEAAQI+VFG+M  +GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MAGFRRWGIWADWEHPYLTLQKEYEAAQIQVFGKMFQKGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPS-TSGLLNEFL--PDLGL--------AVWTTTPWT 109
           AELEYP+GH S S+Y  F     P    + L N+ L  P+ GL        A+WTTTPWT
Sbjct: 209 AELEYPDGHTSPSVYVAFPAAKLPEKLRTSLGNQGLELPNNGLELGQALQIAIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AV+VN KL Y+                           D +   ++VA++L+P+L
Sbjct: 269 LPANLAVSVNEKLDYSFA------------------------VDNQGRLLLVAAELLPSL 304

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
                 +L  + T+ G+ L    Y HP+ +R  P+VIGG+YITTESGTGLVHTAPGHG +
Sbjct: 305 RDTLALELTARATVKGALLAGLIYKHPLLDRDSPIVIGGEYITTESGTGLVHTAPGHGVD 364

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T  K+ L +L PVD+ G  T EAG F+GL+VL D N  ++  L+E+ +L+  EPY H
Sbjct: 365 DFNTGQKHDLGMLCPVDESGTMTSEAGPFAGLNVLKDANPTIIAALEERGALLKHEPYAH 424

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 425 RYPYDWRTKKPTIFRATEQWFASVEGFRNEALTAINSVEWLP 466



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 203/339 (59%), Gaps = 19/339 (5%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPPYGADVLRLWVSSVDYSADVPIGASILRQIADVYRKVRNTSRYLLGNLHDFDPERD 706

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I   +LP++D++ L +   ++  I  +++ Y+F++ FQ++Q + +VDLSNFY D+AKDR
Sbjct: 707 AIPVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDR 766

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    +   RRSCQT ++  +  +   I+P+L H+AED+WQNLP++       A + VF
Sbjct: 767 LYVSSPSERRRRSCQTAMALIIERLAGAISPVLCHMAEDIWQNLPYSV------AEDSVF 820

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
              WP + E WR   +  +    ++ ELR+ VN+VLE  R+   +G++LEA V L     
Sbjct: 821 RRGWPTVPETWRDPSM--MAPMHQLRELRSAVNRVLEDCRSQGELGAALEAAVRLEAHSE 878

Query: 572 SLASRLREM-CTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           +L   L  +      D D L+   ++S ++V            P++     +      I 
Sbjct: 879 ALQEALDWLRQQGDPDVDGLRDWLLVSHLQV---------GGEPWAELLASQDNALATIE 929

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           V+RA GSKCERCW+Y T VG    HPTLC RC  VL  Q
Sbjct: 930 VARARGSKCERCWHYETDVGQHTTHPTLCGRCVGVLEHQ 968


>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|84029557|sp|Q46HD5.1|SYI_PROMT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 967

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 224/341 (65%), Gaps = 34/341 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+GVW DW+ PYL+LD ++EA+QI++FG+M  +GYIYRG KPVHWSPSS+TALAE
Sbjct: 149 MDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVFKGYIYRGLKPVHWSPSSQTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL----------GLAVWTTTPWTV 110
           AELEYP GH S+SIY  F++   P   +  +++  PDL           L +WTTTPWT+
Sbjct: 209 AELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLINSEGKLKELKLVIWTTTPWTI 268

Query: 111 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 170
           PAN A++VN KL+Y + +                           +  II+A+DL+  + 
Sbjct: 269 PANEAISVNQKLEYVIAQ------------------------SSDRSLIIIANDLLQEVS 304

Query: 171 AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 230
              G     +  + GS L+   Y HP+ ++  PVV+GGDYITTESGTGLVHTAPGHG +D
Sbjct: 305 KSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLGGDYITTESGTGLVHTAPGHGVDD 364

Query: 231 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           + T+ KY L I  PVD++G  T+EAGKF GL+VL D N  ++  L    SL+ E PYEH+
Sbjct: 365 FNTAKKYNLSISCPVDEKGFLTKEAGKFEGLNVLKDANSVIISDLINAGSLLKEIPYEHR 424

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+P
Sbjct: 425 YPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDVIWLP 465



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 206/333 (61%), Gaps = 19/333 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP + + W+           ++ +LR  +N++LE  R  + +GSSLEA V +   D  + 
Sbjct: 823 WPNVPKSWKNSSFN--CHVTELRKLRAVINRMLESCRNNQALGSSLEASVRVDISDEKVK 880

Query: 575 SRLREMCTAK-HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           + +  +  ++ ++ D L+  F++S ++         I   P++   + E  D   + +++
Sbjct: 881 AAIEWLAESESNNVDVLRDWFLVSSLQ---------IGGEPWAEVLVSEDNDYASVEIAK 931

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G KCERCW+Y  ++    +H  +C RC +V+
Sbjct: 932 ARGFKCERCWHYEIEMSKNPQHTNICKRCEKVV 964


>gi|449015875|dbj|BAM79277.1| isoleucine--tRNA ligase [Cyanidioschyzon merolae strain 10D]
          Length = 1079

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 192/392 (48%), Positives = 252/392 (64%), Gaps = 48/392 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW  WN PYLTLD +YEAAQ+ +FG+M L+GYIYRG+KPV+WSPSSRTALAEAEL
Sbjct: 248 FKRYGVWGTWNAPYLTLDHQYEAAQVRIFGEMFLKGYIYRGRKPVYWSPSSRTALAEAEL 307

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWTTTPWTVPANAAVAVNAKL 122
           EYP+ HVSRS Y  F +V A     G+++E   D   +A+WTTTPWT+PAN AVAVN  L
Sbjct: 308 EYPDVHVSRSAYVAFEVVDA-GKLRGIISELEFDSFRVAIWTTTPWTIPANRAVAVNPNL 366

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y++V ++           +++ +P  +L        +VA DLV TLE K    L  KK 
Sbjct: 367 PYSIVALE-----------DEQGKPCTLL--------VVAQDLVETLEQKLHRPLSNKKI 407

Query: 183 LAGSDLENCRYVHPVDNRQC-PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           + GS+L    Y HP+   +   VV GGDYITTESGTGLVHTAPGHG EDY   L+  L +
Sbjct: 408 VPGSELVGMTYRHPLYPMEVYRVVAGGDYITTESGTGLVHTAPGHGLEDYNVGLRESLEV 467

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +PVDD G+FT +AG + +GL VL +GN  V++ L    +L++EE YEHKYPYDWRT++P
Sbjct: 468 FAPVDDVGRFTSDAGPELAGLPVLQEGNARVLELLRSSNALLLEEKYEHKYPYDWRTREP 527

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVD--------- 351
           TI RATEQWFASV  FR  A++A+  V+WVPP      G + +R  + S D         
Sbjct: 528 TIVRATEQWFASVRQFRDKALEALQSVQWVPPA-----GENRIRGMIESRDDWCISRQRP 582

Query: 352 -----------YTGDVMIGPQVLRQMSDIYRK 372
                       TG+ +I  ++++ +S+I+ K
Sbjct: 583 WGVPIPVFYDEDTGEAVISMEIIQYVSEIFAK 614



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 200/347 (57%), Gaps = 34/347 (9%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-- 390
            ++ P  GADVLRLWV+SVDY  DV+IGP +L+Q +D YRK+R TLR+L GN+  W     
Sbjct: 746  KKQPALGADVLRLWVASVDYMSDVLIGPTILKQTADAYRKIRNTLRFLAGNVPRWDETCP 805

Query: 391  ---NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
               N+++  +LP +D+Y L +   ++K+I ++Y+++ F +IFQ + RF + DLSNFY D+
Sbjct: 806  VSVNALNDANLPSLDRYILRRAAAVLKDIEDAYKNFTFNRIFQSVLRFCVADLSNFYLDI 865

Query: 448  AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            AKDR Y        R++CQ  + A L+ + R +APILPH  ED+WQ L     L  G+  
Sbjct: 866  AKDRCYVAAPDEPRRQTCQATMWAILMDMARALAPILPHTVEDLWQCLRKDGKLPSGAPI 925

Query: 508  EFVFESKW-----PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA 562
              +F++ W      +L +++      E   W  + E+R  VNK LE ART  LIGSSLEA
Sbjct: 926  S-IFQNGWYSYVPQILSDEY------EDKKWTIVREVRELVNKALETARTNGLIGSSLEA 978

Query: 563  KVYLFTDDASLASRLREMCTA---KHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
            +V ++      A  + E  T+    +  D L+  FI SQV+V+  + NG   +   + E 
Sbjct: 979  RVIIYPH----ARHVEEALTSFDPSNGVDDLRYFFITSQVDVVRCSGNG--ESPGAASET 1032

Query: 620  LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             VE        V +A GSKC RCWN+S  VG+  EH  +C RC   L
Sbjct: 1033 HVE--------VQKAYGSKCARCWNFSETVGALHEHSQVCERCVRSL 1071


>gi|307104070|gb|EFN52326.1| hypothetical protein CHLNCDRAFT_36907 [Chlorella variabilis]
          Length = 1038

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 180/328 (54%), Positives = 215/328 (65%), Gaps = 23/328 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVWADW+ PY+TL+P YEAAQ+ VFGQM L G+IYR  K    +    T+  +   
Sbjct: 208 FKRYGVWADWDAPYVTLEPAYEAAQLRVFGQMVLNGHIYRCGKASAATDCMHTSNTQ--- 264

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
              +GH S SIY    + +  P+        L      +WTTTPWT+PAN AVAVNA LQ
Sbjct: 265 ---KGHTSCSIYVAMPLQAVGPNAPEAAGAALEGAHFGIWTTTPWTIPANLAVAVNADLQ 321

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE+Q                 G++ +      +IVA+DL  +L  K+G  L    T+
Sbjct: 322 YAVVEVQ-----------------GDLPEGWTVRRLIVAADLADSLAEKFGIALTTLCTV 364

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G++LE C Y HP+ +R  PVV GGDYITTESGTGLVHTAPGHGQEDY    KYGLP+LS
Sbjct: 365 KGAELEGCSYRHPLFDRTSPVVAGGDYITTESGTGLVHTAPGHGQEDYQVGQKYGLPLLS 424

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G FT+EAG F+GL V GDGN AVVK L     L+MEE Y HKYPYDWRTKKPTIF
Sbjct: 425 PVDDAGVFTDEAGPFAGLQVQGDGNDAVVKALAAAGVLLMEERYAHKYPYDWRTKKPTIF 484

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT+QWFASVEGFR AA++AI    W+P
Sbjct: 485 RATDQWFASVEGFRSAALEAIQGAHWIP 512



 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 151/336 (44%), Positives = 215/336 (63%), Gaps = 8/336 (2%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
            ++ P YGADVLRLWVSSVDY+ DV+IG +++ Q++D+YRK+R TLRYLLGNL D+    +
Sbjct: 693  KKEPPYGADVLRLWVSSVDYSSDVLIGGRIIGQVADVYRKMRFTLRYLLGNLADFEPAAH 752

Query: 392  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            ++ +  L   D+Y L +   +V     +Y SYQF+K++Q +QRF ++DLSNFY DVAKDR
Sbjct: 753  AVPHAQLAAADRYILARFAALVDECSAAYGSYQFYKVYQALQRFTVLDLSNFYLDVAKDR 812

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY     +  RR+CQTVL+A L  ++ VIAP+LPH+AED WQNLP+    +       VF
Sbjct: 813  LYISAAAAPDRRACQTVLAALLEGMLPVIAPLLPHMAEDAWQNLPYKRQEQS------VF 866

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            ++ W  + ++WR  P  +   W  +L +R+E+N +LE AR  K +G+SLEAKV L     
Sbjct: 867  QAGWAAVPDEWRQLPEADAMLWRAVLGIRSEINLLLEKARADKALGASLEAKVLLHVACP 926

Query: 572  SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE-GKDKVWIG 630
             L ++L  +  A +  D L+  FI+SQ +++ S           +   L E G  +V +G
Sbjct: 927  ELRAQLEALQAAGNGMDPLRYAFIVSQAQLVESPAAAAEGAAYSATAVLEEAGGSEVTVG 986

Query: 631  VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V+RA+G KC RCWNYST VGS  +HP LC RC  V+
Sbjct: 987  VARADGRKCNRCWNYSTHVGSDEQHPELCERCVPVV 1022


>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|254782425|sp|A9BDK6.1|SYI_PROM4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 969

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 218/342 (63%), Gaps = 34/342 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+G+W +WN PYLTL  EYE+AQ+++FGQM L+GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MEGFKRWGIWGNWNKPYLTLQKEYESAQVKLFGQMVLKGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTS-----------GLLNEFLPDLGLAVWTTTPWT 109
           AELEYPE H S S+Y  F ++  P S S           G   E    L + +WTTTPWT
Sbjct: 209 AELEYPEAHTSPSVYVAFSVIHLPQSLSENLIKQGLELPGDEVELSKRLKVCIWTTTPWT 268

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PANAAV+VN+ L Y+ V                         ++K   +I A++L+  +
Sbjct: 269 LPANAAVSVNSNLDYSFVR-----------------------HEEKGQILIFATELLEEV 305

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
               G          G  L+   Y HP+  R  P+V+GG YITT+SGTGLVHTAPGHG +
Sbjct: 306 SEILGISFKQVANAKGESLKGILYKHPLYERTAPIVLGGSYITTQSGTGLVHTAPGHGID 365

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+ T L+  L +  PVD++G FT EAGKF GL+VL D N  ++  L+   SL+ E PY H
Sbjct: 366 DFKTGLQNNLEVFCPVDEKGIFTSEAGKFEGLNVLKDANKEIISSLEISGSLLKELPYVH 425

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  V+W+P
Sbjct: 426 KYPYDWRTKKPTIFRATEQWFASVEGFREDALKAIDDVEWLP 467



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 202/333 (60%), Gaps = 19/333 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNLHD+    NS+ 
Sbjct: 651 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTSRYLLGNLHDFDPKKNSVD 710

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D+LP++D++ L +   ++  I  ++E Y+F + FQ++Q F  VDLSNFY D+AKDRLY 
Sbjct: 711 IDNLPILDKWMLNRTAEVIDEITLAFEKYEFSRFFQLLQSFCTVDLSNFYLDIAKDRLYV 770

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RR+CQTV++  +  +  +I+P+L H+AED+WQN+P+  +       E VF+  
Sbjct: 771 SAPDDPRRRACQTVMALIIEKLAGLISPVLCHMAEDIWQNIPYQLS------EESVFKRG 824

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WPV    W+   + E      I ELRT VN+VLE  R  + +GSSLEA + L   +  L 
Sbjct: 825 WPVSPSNWKRASLTEPI--SLIRELRTSVNRVLEGCRNRQELGSSLEAGLRLEITNQGLL 882

Query: 575 SRLREMC-TAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             +  +     HD D ++  F++SQ++         I   P++   + +  +   I +S 
Sbjct: 883 DAIDFLAKNGDHDVDCIRDWFLVSQLQ---------IGGEPWAEVLISQQFELGVIEISN 933

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G KCERCW+Y   +GS  EHPTLC RC  V+
Sbjct: 934 ARGYKCERCWHYEQDIGSCSEHPTLCGRCVTVM 966


>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166229754|sp|A2C071.1|SYI_PROM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 967

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/341 (50%), Positives = 221/341 (64%), Gaps = 34/341 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+GVW DW+ PYL+LD ++EA+QI++FG+M  +GYIYRG KPVHWSPSS+TALAE
Sbjct: 149 MDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVFKGYIYRGLKPVHWSPSSQTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL----------GLAVWTTTPWTV 110
           AELEYP GH S+SIY  F++   P   +  +++  PDL           L +WTTTPWT+
Sbjct: 209 AELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLINSEGKLKEVKLVIWTTTPWTI 268

Query: 111 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 170
           PAN A++VN KL+Y + +                           +  II+A+DL+  + 
Sbjct: 269 PANEAISVNQKLEYVIAQ------------------------SSDRSLIIIANDLLDEVS 304

Query: 171 AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 230
              G     +  + GS L+   Y HP+ ++  PVV+GGDYITTESGTGLVHTAPGHG +D
Sbjct: 305 KSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLGGDYITTESGTGLVHTAPGHGVDD 364

Query: 231 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           + T  KY L I   VD +G  T+EAGK+ GL+VL D N  ++  L    SL+ E PYEH+
Sbjct: 365 FNTGKKYNLSISCTVDAKGFLTKEAGKYEGLNVLKDANSVIISDLINSGSLLKEIPYEHR 424

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+P
Sbjct: 425 YPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDVIWLP 465



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 206/333 (61%), Gaps = 19/333 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP + + WR           ++ +LR  +N++LE  R  + +GSSLEA V +   D  + 
Sbjct: 823 WPNVPKSWRNSSFN--CHVTELRKLRAVINRMLESCRNNQALGSSLEASVRVDISDEKVQ 880

Query: 575 SRLREMCTAK-HDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           + +  +  ++ ++ D L+  F++S ++         I   P++   + E  D   + +++
Sbjct: 881 AAIEWLAESESNNVDVLRDWFLVSSLQ---------IGGEPWAEVLVSEDNDYASVEIAK 931

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G KCERCW+Y  ++    +H  +C RC +V+
Sbjct: 932 ARGFKCERCWHYEIEMSKNPQHTNICKRCEKVV 964


>gi|428221446|ref|YP_007105616.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
 gi|427994786|gb|AFY73481.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
          Length = 946

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 241/384 (62%), Gaps = 42/384 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW D+ N Y TL PEYEAAQI VFG+M+L GYIYRG KPV+WSPSS+TALAEAEL
Sbjct: 151 FKRWGVWGDYENAYYTLKPEYEAAQIGVFGKMALNGYIYRGLKPVYWSPSSQTALAEAEL 210

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EYPE HVS+SIY  F +     +   +L +    +L   +WTTTPWT+PAN  ++ N  L
Sbjct: 211 EYPEDHVSKSIYVAFPVTKISDTFQLVLGDRQFSNLHAVIWTTTPWTIPANLGISANPHL 270

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y++V     L G+                       I+A+DLV  L A +G +L I+ T
Sbjct: 271 NYSIV-----LAGEK--------------------HYIIATDLVDKLSATFGEELSIQLT 305

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LE+    HP+ +R  P+++G D++T ESGTGLVHTAPGHG++D++   +YGL +L
Sbjct: 306 FKGEVLEHTIAQHPIFDRLSPILLG-DHVTAESGTGLVHTAPGHGKDDFIVGNRYGLGVL 364

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV+D G FTEEAG+FSGL+VL +GN  V++ L E  +L+  E Y+HKYPYDWRTKKPTI
Sbjct: 365 SPVNDYGIFTEEAGQFSGLNVLKEGNTKVIEVLSELGALVKTEDYKHKYPYDWRTKKPTI 424

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSVDY 352
            RATEQWFASV+GFR  A+ AI +V W+P           QE   +     R W   +  
Sbjct: 425 VRATEQWFASVDGFRDIALGAIKEVNWIPAIGENRITAMVQERSDWCISRQRSWGVPIPV 484

Query: 353 -----TGDVMIGPQVLRQMSDIYR 371
                T + +  P+ +  + +I+R
Sbjct: 485 FYDMDTNEPLFTPETIAHIQEIFR 508



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/335 (43%), Positives = 202/335 (60%), Gaps = 25/335 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           Q+ P YGADVLRLWV+SVDY+ DV I   +L+Q+SD+  K+R T R+LL NL D+    N
Sbjct: 634 QQEPAYGADVLRLWVASVDYSSDVPISKNILKQISDVSFKIRNTARFLLSNLFDFNPSEN 693

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I++++L   D Y L +L  I + I E+Y ++QF + FQ+IQ F +VDLS+FY D+AKDR
Sbjct: 694 AIAFEELQESDCYLLHRLYEITQEITEAYNNFQFSRFFQLIQNFCVVDLSSFYLDIAKDR 753

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RR+CQTVL+  + +I  +IAP+L HLAED+WQ+LP+  + +       VF
Sbjct: 754 LYISAANSPRRRACQTVLALTVQAIATLIAPVLSHLAEDIWQHLPYPVSTKS------VF 807

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W    E+W    +     W  + ++R+EVNKVLE AR  K IGSSL+AKV L  ++ 
Sbjct: 808 QAGWVTSPEQWHNPELAAK--WDILRDVRSEVNKVLESARNAKAIGSSLDAKVLLKVENP 865

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            L  +L  +         L  +FI SQ E+  + PN       Y+G     G     I V
Sbjct: 866 ELKDKLISL------GKDLTYLFIASQTELAENLPNS-----EYTGTAAGLG-----IAV 909

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             A+G KC RCWNYST +G   EHP LC RC + +
Sbjct: 910 VNADGEKCPRCWNYSTHIGESTEHPHLCDRCVDAI 944


>gi|323454274|gb|EGB10144.1| hypothetical protein AURANDRAFT_10097, partial [Aureococcus
           anophagefferens]
          Length = 1008

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 182/336 (54%), Positives = 214/336 (63%), Gaps = 33/336 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+RYGVWADW+ PYLTL P YEAAQ+ VF  M  QG+IYRG KPV +SPSSRTALAEAE
Sbjct: 147 SFRRYGVWADWDAPYLTLQPAYEAAQLRVFATMFEQGHIYRGLKPVWYSPSSRTALAEAE 206

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYP+GH S S+YA   ++   PS          D  LAVWTTTPWT+PAN AVAVN  L
Sbjct: 207 LEYPDGHTSPSVYAALDVLE--PSAGLAAVAGGADAKLAVWTTTPWTLPANLAVAVNGDL 264

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVV                         D  K  ++VA DLV  L AK+  +L ++ +
Sbjct: 265 DYAVV-------------------------DSPKGALVVAVDLVDALAAKFACELTVRGS 299

Query: 183 LAGSDLENCRYVHPVDN-----RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
           L G+ L    Y  PV N     R   VV+GGDYIT+E GTGLVHTAPGHG +DY T LK+
Sbjct: 300 LKGAALAGTTYARPVANGALGARPAAVVVGGDYITSEGGTGLVHTAPGHGMDDYQTGLKH 359

Query: 238 GLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
            LP  SPVD  GKFT +AG    GL VLG G   +   L+   +L++ EPYEH+YPYDWR
Sbjct: 360 DLPPFSPVDAAGKFTADAGDGLEGLPVLGAGGEEIAARLEAAGNLLLAEPYEHRYPYDWR 419

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           TKKP + RAT+QWFASV  FRQ A+DAI  VKW PP
Sbjct: 420 TKKPVLMRATDQWFASVSSFRQDALDAIDAVKWTPP 455



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 189/365 (51%), Gaps = 41/365 (11%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHD--------- 386
            P YGADVLRLWV+SVDYT DV +G   L+Q+ + YRKLR TLRY+ GN++          
Sbjct: 650  PPYGADVLRLWVASVDYTADVRLGKNALKQVFEQYRKLRNTLRYMAGNVNGAPTRGTDAF 709

Query: 387  --WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFY 444
              +   ++ +Y  LP +D++ L +L  + +   ++YE+YQF +    I  F + +LS  Y
Sbjct: 710  AAYDARDARTYASLPDLDKWLLGRLGALERECFDAYENYQFSRAVGAISAFAVNELSALY 769

Query: 445  FDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYT 500
             DVAKDR+Y     +  R +C   L A L  + R++AP+LPHLAE+++Q LP+    AY+
Sbjct: 770  LDVAKDRMYVSPAKAGRRVTCMATLVACLDVLPRLLAPLLPHLAEELFQALPYAAGDAYS 829

Query: 501  LEDGSAAEFVFESKWPVLD-EKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 559
             E GS    VF+ +    D      +   E   +  +   R + N+ LE AR  K++G+S
Sbjct: 830  AERGS----VFDLRGDPWDGTNLAPYAAHEEATFAAVRAFRDDANRALEAARRDKVLGAS 885

Query: 560  LEAKVYLFTD-DASLASRLREMCT--------AKHDADT------LQRIFIISQVEVLPS 604
            L+A VY     D +L +               A H AD       L+ + ++S V V   
Sbjct: 886  LDATVYAAPPADPALKAAFEAALGPLAAAGKIAPHAADAPDCVDDLRFLLLVSDV-VFVD 944

Query: 605  TPNGLIRNIPYSGEYLVEGKD---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSR 661
             P  ++        ++V  +D   K  +G + A   +C RCW +   VG   +HPTLC+R
Sbjct: 945  APADVLAAC--DAAHVVAAEDSETKATVGAAPATALRCLRCWYHEDSVGDSPDHPTLCAR 1002

Query: 662  CYEVL 666
            C + +
Sbjct: 1003 CDDAV 1007


>gi|428216724|ref|YP_007101189.1| isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
 gi|427988506|gb|AFY68761.1| Isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
          Length = 960

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 176/333 (52%), Positives = 223/333 (66%), Gaps = 23/333 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW D+++ Y TL PEYEAAQI VFGQM L+GYIYRG KPV+WSPSS+TALAEAEL
Sbjct: 150 FKRWGVWGDYDHAYYTLKPEYEAAQINVFGQMVLKGYIYRGLKPVYWSPSSQTALAEAEL 209

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-----DLGLAVWTTTPWTVPANAAVAV 118
           EYPEGH SRSIY  F +          L + L       L   +WTTTPWT+P N AV+ 
Sbjct: 210 EYPEGHTSRSIYVAFPVTEIGDKLKAALGKNLDAVPADRLYAMIWTTTPWTIPGNLAVSA 269

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           N +L+Y++V+   L +                  DQ   + +VA++LV  L      +L 
Sbjct: 270 NPRLKYSLVKATGLDD-----------------TDQGDRYYVVATELVEQLAKLLEQELT 312

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
              T++G  LE+    HP+ +R  P+++G +++T ESGTGLVHTAPGHG++DY    KYG
Sbjct: 313 EIATMSGEALEHTVCKHPIFDRASPILLG-EHVTAESGTGLVHTAPGHGRDDYNVGQKYG 371

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +LSPV+D G FTEEAG+F+GL VL +GN AV+  L E   L+ EE Y+HKYPYDWRTK
Sbjct: 372 LGLLSPVNDYGVFTEEAGQFAGLKVLKEGNQAVIDALSETGLLLKEEAYQHKYPYDWRTK 431

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KPTI RATEQWFASV+GFR AA+ AI  V W+P
Sbjct: 432 KPTIVRATEQWFASVDGFRDAALAAIRSVNWIP 464



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/336 (46%), Positives = 209/336 (62%), Gaps = 24/336 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGADVLRLW SSVDY+ DV  G  +L Q+ D+ RK+R T R+LL NL+D+    N
Sbjct: 645 KQEPAYGADVLRLWASSVDYSSDVPFGKTILSQIFDVSRKIRNTARFLLSNLYDFDPAKN 704

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +I+YD L  +D+Y L +L  +   I ++++SYQFF+ FQ++Q F  VDLSNFY D+AKDR
Sbjct: 705 AIAYDQLTELDKYLLHRLYEVGTEITKAFDSYQFFRFFQLMQNFCAVDLSNFYLDIAKDR 764

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTV++  L  IV+ IAP+L H AED+WQ+LP  Y +E  S    VF
Sbjct: 765 LYISAADSPRRRSCQTVMAIALNLIVKAIAPVLCHTAEDIWQHLP--YPVEQKS----VF 818

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W  L+  W+   + E   W  + ++R EVNKVLE ART K IGSSL+AKV L   + 
Sbjct: 819 QAGWFELNSTWQQPELAEK--WQSLRQVRNEVNKVLEQARTDKAIGSSLDAKVLLVVAEP 876

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            LA++L  +      AD L+ +FI SQ E        L+  IP   +Y +E  + + I V
Sbjct: 877 DLATQLESL-----GAD-LRYLFITSQAE--------LVAAIPADAKYTLE-TETLKIAV 921

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             A+G KC RCWNY+  VG   EHP LC RC   LA
Sbjct: 922 VSADGEKCPRCWNYAVTVGESSEHPALCDRCVGALA 957


>gi|194476997|ref|YP_002049176.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192004|gb|ACB42966.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
          Length = 967

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 171/345 (49%), Positives = 215/345 (62%), Gaps = 43/345 (12%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R+GVW +W+ PYLT + +YEA QI VFG M L G+IYRG KPVHWSPSSRTALAEA
Sbjct: 144 AGFIRWGVWGEWDKPYLTFNKDYEAQQIGVFGNMVLAGHIYRGLKPVHWSPSSRTALAEA 203

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA---------------VWTTT 106
           ELEYP+ H+S S+Y  F ++     T  L  E L   GLA               +WTTT
Sbjct: 204 ELEYPDDHISPSVYVSFPIIEL---TENLCQE-LKKQGLALNRIDQNLKRYFDVVIWTTT 259

Query: 107 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 166
           PWT+PAN  ++V+A L+Y VV                         D++   +I+A  LV
Sbjct: 260 PWTLPANLGISVSASLEYCVV------------------------VDEQNRHLIIAKVLV 295

Query: 167 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 226
             L         IK T+ G +LE   Y +P+ +R   V++GGDYITTE+GTGLVHTAPGH
Sbjct: 296 DNLSTILDRSFKIKATIKGFELEGLIYRNPLIDRTNTVILGGDYITTETGTGLVHTAPGH 355

Query: 227 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 286
           G +D+ T   Y LPIL PVD  G  T EAG FSGL+VL D N ++++ L     LI +E 
Sbjct: 356 GVDDFNTGHSYNLPILCPVDQAGTLTSEAGAFSGLNVLKDANTSIIQALHITNDLIKKED 415

Query: 287 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           Y H+YPYDWRTKKPTIFR TEQWFAS+EGFR+ A++AI +V W+P
Sbjct: 416 YNHRYPYDWRTKKPTIFRTTEQWFASLEGFRKKALEAIQEVVWIP 460



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/341 (41%), Positives = 202/341 (59%), Gaps = 25/341 (7%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           ++ P YGAD+LRLWVSSVDY+ DV IG  VL+Q++D+YRK+R T RYLLGNLHD+  + +
Sbjct: 641 KDEPPYGADILRLWVSSVDYSVDVSIGSNVLKQLADVYRKVRNTSRYLLGNLHDFTPITD 700

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I  ++LP++D++ L +   ++  +  ++E ++FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 701 GIDIEELPLLDKWMLNRTAEVIDEVTTAFEQFEFFRFFQTLQNFCVVDLSNFYLDIAKDR 760

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY        RRSCQTVL   L  I  +IAP+L H+AED+WQ+LP  Y +ED S    VF
Sbjct: 761 LYVSAANDSRRRSCQTVLHLLLECIASLIAPVLCHMAEDIWQSLP--YPVEDLS----VF 814

Query: 512 ESKWPVLDEKWR----TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
              WP +   WR      P+  +       ELR+ VN+ LE+ R+  ++  SLEA+V L 
Sbjct: 815 NRGWPTVPNNWRQNNLKIPINHLR------ELRSIVNRQLEITRSNGMLKGSLEARVRLE 868

Query: 568 TDDASLASRLREMC-TAKHDADTLQRIFIISQVEV-LPSTPNGLIRNIPYSGEYLVEGKD 625
                L   +  +  +   + D L+   ++SQ+++   S  N L  N      +      
Sbjct: 869 IKSKPLIRAIEMLVHSGNREVDVLRDWLLVSQLDLGCESFSNVLSTNKAEETSF------ 922

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + VS+AEGSKCERCW+Y    G    +P+LC RC   L
Sbjct: 923 DVIVQVSKAEGSKCERCWHYEKDTGIDTGYPSLCRRCINTL 963


>gi|37523220|ref|NP_926597.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708786|sp|Q7NF75.1|SYI_GLOVI RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|35214223|dbj|BAC91592.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 983

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/370 (48%), Positives = 224/370 (60%), Gaps = 65/370 (17%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           AS+KR+GVW DW++PYLTL PEYEAAQ+ VFG+M+L+GYIYRG KPVHWSPSS+TALAEA
Sbjct: 143 ASYKRFGVWGDWDHPYLTLQPEYEAAQLGVFGKMALKGYIYRGLKPVHWSPSSQTALAEA 202

Query: 62  ELEYPE------GHVSRSIYAVFRMVS-APPSTS-----------------------GLL 91
           ELEYP        H SRS+Y  F ++S A P T+                        LL
Sbjct: 203 ELEYPTKDDGSPAHTSRSVYVKFPLISIAAPETATVMAAELLPRLSAFHDREEELIDALL 262

Query: 92  NEF--LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGN 149
            E   LP++ +A+WTTTPWT+P N AVA+N +L YA+V                      
Sbjct: 263 GERDDLPEIAVAIWTTTPWTLPGNLAVALNGELDYALV---------------------- 300

Query: 150 VLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGD 209
                +   +IVA++LV  L     T+     T  G +LE     HP+  R  P+V+ GD
Sbjct: 301 --ASDEHGLLIVAAELVERLAGTLATRFETIATFRGRELEGSLLAHPLFRRTSPIVL-GD 357

Query: 210 YITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK--------FSGL 261
           ++TTESGTG VHTAPGHG ED+  + +Y L +LSPVDD G+FT EA          F+G 
Sbjct: 358 HVTTESGTGAVHTAPGHGSEDFELAQRYNLGVLSPVDDYGRFTREADSDRRENLPVFAGK 417

Query: 262 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 321
            VL DGN AV++ L    +L+ EE Y HKYPYDWRTKKPTIFRAT QWFASV  FR  A+
Sbjct: 418 AVLSDGNQAVIEALSAAGALLKEEAYVHKYPYDWRTKKPTIFRATTQWFASVSDFRPQAL 477

Query: 322 DAIGQVKWVP 331
            AI Q +W+P
Sbjct: 478 SAIAQTEWIP 487



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 159/336 (47%), Positives = 206/336 (61%), Gaps = 27/336 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++ P YGADVLRLWV+SVDYT D ++GP VL Q++++YRK+R T RYLLG+L+D+     
Sbjct: 671 KQHPAYGADVLRLWVASVDYTSDQLVGPSVLAQIAEVYRKIRNTARYLLGSLNDFVPERD 730

Query: 393 -ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +++D L  +DQY L +L  +   + +++ESYQF + FQ IQ F + DLSNFY D++KDR
Sbjct: 731 LVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQNFCVADLSNFYLDISKDR 790

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL   L S+ R+IAP+LPHLAED+WQ+LP  Y   D S    VF
Sbjct: 791 LYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQHLP--YPRSDAS----VF 844

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           E+ WPV   +W  F    +  W  ++ LR  VN  LE AR  K IGSSLEAK+ L  +D 
Sbjct: 845 EAGWPVDHSQW--FQPLTVDRWPGLIVLRDRVNIALEAARNAKRIGSSLEAKIRLHVEDP 902

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
           +L   L          D L+ +FI+SQVE+L   P           E  VE  +   + V
Sbjct: 903 ALTDEL------ARQKDELRYLFIVSQVELLDELP----------AEVSVE--EGAAVIV 944

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             A+G KCERCWNYS  VG   EHPTLC RC   LA
Sbjct: 945 LDADGQKCERCWNYSVHVGEDAEHPTLCERCVSALA 980


>gi|33860796|ref|NP_892357.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81576445|sp|Q7V352.1|SYI_PROMP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33633738|emb|CAE18697.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 965

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 169/340 (49%), Positives = 216/340 (63%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           +  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 LEGFKRWGIWGDWDNPYLTLKKNYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPST------SGLLNEFLPDLG---LAVWTTTPWTVP 111
           AELEYPE H S+SIY    +     +         L N+ L  L    +A+WTTTPWT+P
Sbjct: 209 AELEYPEEHFSKSIYVSLNITKLSDAVLLKLEEKDLRNKLLSSLNKLFIAIWTTTPWTIP 268

Query: 112 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 171
            N AVA+N ++ Y     Q+                GN+         + A DL+  +  
Sbjct: 269 GNEAVAINPRINYVFASDQN----------------GNIY--------LFARDLISEICE 304

Query: 172 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
           K   +  +   + GS LE   Y HP  N+ C +VIGGDYITTESGTG+VHTAPGHG +D+
Sbjct: 305 KLDREFNVLLDVKGSLLEGLEYKHPTKNKFCNIVIGGDYITTESGTGIVHTAPGHGMDDF 364

Query: 232 VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
               KY LPI   VD++G   + A KF GL+VL D N  +++ L++   L+++E Y+H+Y
Sbjct: 365 NVGQKYQLPITCIVDEKGNLNKHAEKFCGLNVLKDANDLIIEDLEKNNLLLLKENYKHRY 424

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKPTIFRATEQWFASVEGFR +A+ AI  V+W+P
Sbjct: 425 PYDWRTKKPTIFRATEQWFASVEGFRSSALKAIEDVEWMP 464



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 197/335 (58%), Gaps = 19/335 (5%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+      I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPALEEID 707

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D LP++DQ+ L +L  +   +  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLNRLVEVSDEVTIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              T F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++ T+E       VFE +
Sbjct: 768 SAKTQFRRRSCQFVMSRIVENLAVIISPVLCHMAEDIWQNIPYS-TIEKS-----VFERR 821

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP   E W    + E      +  LR E+NK +E  RT ++IG++LE +V    ++    
Sbjct: 822 WPKFPESWLNPELNEHI--SNLRTLRVEINKAIEGCRTQQMIGAALETEVNYLPENEFFK 879

Query: 575 SRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           + L  +      + D  +   I+S   ++ +     +          ++  +   I + +
Sbjct: 880 NSLSWLDKFGNKEVDLYRDWLIVSDFNIVNNLSKDCLS---------IDNNELGKIQILK 930

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           A+G KC+RCW+Y       +E+  LC RC  ++ +
Sbjct: 931 AKGLKCDRCWHYQNITVKGIENTKLCERCANIINL 965


>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229755|sp|A2BUL8.1|SYI_PROM5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 965

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/340 (49%), Positives = 210/340 (61%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           +  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 LEGFKRWGIWGDWDNPYLTLKNNYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPST------SGLLNEFLPDLG---LAVWTTTPWTVP 111
           AELEYPE H S S+Y    + +             L N+ L +L    +A+WTTTPWT+P
Sbjct: 209 AELEYPEEHYSSSVYVSLNISNLSDEILLKLEEKDLKNKLLSNLNKLFIAIWTTTPWTIP 268

Query: 112 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 171
            N AVA+N ++ Y   E                        DQ     + A DL+  +  
Sbjct: 269 GNEAVAINPRINYVFAE------------------------DQNGDIFLFAKDLISEISE 304

Query: 172 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
           K   +      + GS L    Y HP  N+ C +VIGGDYITTESGTG+VHTAPGHG +D+
Sbjct: 305 KLEREFNTLIDVKGSMLTGIEYKHPTKNKFCNIVIGGDYITTESGTGIVHTAPGHGMDDF 364

Query: 232 VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
               KY LPI   VD++G     A KF GL+VL D N  +++ L +   L+++E Y+H+Y
Sbjct: 365 NVGKKYHLPITCIVDEKGNLNNHAEKFCGLNVLKDANDLIIEDLKKNNLLLLKEKYKHRY 424

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKPTIFRATEQWFASVEGFR +A+ AI  V+W+P
Sbjct: 425 PYDWRTKKPTIFRATEQWFASVEGFRSSALKAIEDVEWMP 464



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 203/335 (60%), Gaps = 21/335 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+  +   I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPIDEEID 707

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D LP++DQ+ L +L ++   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPILDQWMLNRLVDVSDQITIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              +S  RR+CQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VFE  
Sbjct: 768 SAKSSIRRRTCQFVMSKIVENLAVLISPVLCHMAEDIWQNIPYS------TNEKSVFERG 821

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP L + W    + E      + +LR E+NK +E  RT ++IG++LE +V    ++  + 
Sbjct: 822 WPNLPKSWINPELNERI--SNLRKLRVEINKAIEGCRTQQIIGAALETEVNYLPENEIIK 879

Query: 575 SRLREMCT-AKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW-IGVS 632
           + L  +      + D      I+S+  V+    N L        +YL+   +++  I + 
Sbjct: 880 NSLSWLEKFGNKEVDLYSDWLIVSKFNVV----NNLFE------DYLIIDDNELGKIQIL 929

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +A+G KC+RCW+Y +     +E   LC RC  ++ 
Sbjct: 930 KAKGQKCDRCWHYQSNTVMGIEDTKLCKRCANIIT 964


>gi|119493820|ref|ZP_01624387.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452412|gb|EAW33601.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 402

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 158/265 (59%), Positives = 196/265 (73%), Gaps = 17/265 (6%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKRYGVW DW++PYLTL PEYEAAQI VF QM L+GYIYRG KPVHWSPSS+TALAEAE
Sbjct: 155 SFKRYGVWGDWDHPYLTLKPEYEAAQIGVFAQMVLKGYIYRGLKPVHWSPSSKTALAEAE 214

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEYPEGHVSRS++A F + S   S    L  FLPDLG+A+WTTTPWT+P N AV++N +L
Sbjct: 215 LEYPEGHVSRSLFAAFPITSLAESVKSELTPFLPDLGIAIWTTTPWTIPGNLAVSLNPEL 274

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAVVE     + ++  P   K             +++VA++LV  L A +G  L +K T
Sbjct: 275 TYAVVET----DKNTEHPIPFK-------------YLLVAAELVERLSATFGQTLTVKAT 317

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE+  Y HP+ +R+ PVVIGGDY+TTESGTGLVHTAPGHGQED++   +YGLP+L
Sbjct: 318 IKGKDLEHSTYKHPLFDRESPVVIGGDYVTTESGTGLVHTAPGHGQEDFIVGQRYGLPVL 377

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDG 267
            PVD +G FT+EAG+F+GL+VL D 
Sbjct: 378 CPVDADGNFTQEAGEFAGLNVLKDA 402


>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
 gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
          Length = 1034

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 170/328 (51%), Positives = 203/328 (61%), Gaps = 59/328 (17%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKRYGVW DW++PY+TL+P YEAAQ+ VFG+M L G+IYRG KPVHWSPSSRTALAEAEL
Sbjct: 217 FKRYGVWGDWSSPYVTLEPSYEAAQLRVFGKMFLNGHIYRGLKPVHWSPSSRTALAEAEL 276

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPEGH S ++Y    +V+        + + L   G A+WTTTPWT+PAN AVAVN +L 
Sbjct: 277 EYPEGHRSTAVYVAMPLVAVGEKAGEEMKQALQGAGFAIWTTTPWTIPANLAVAVNDQLD 336

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VVE Q                                 +LV  L  K G +L +  T 
Sbjct: 337 YCVVEAQ---------------------------------ELVGRLAEKTGVELKVLATA 363

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+LE C Y HP+ +R  P+VIGGDYITTE+GT                          
Sbjct: 364 KGSELEGCSYRHPLYDRTSPLVIGGDYITTETGT-------------------------- 397

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G FT EAG F+GL+V G+GN AVV  L E   L+ +E YEHKYPYDWRTKKPTIF
Sbjct: 398 PVDDAGNFTTEAGPFAGLNVQGEGNKAVVAALREAGVLLKDELYEHKYPYDWRTKKPTIF 457

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFASVEGFR AA++AI  V+W+P
Sbjct: 458 RATSQWFASVEGFRGAALEAIRGVQWIP 485



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 209/320 (65%), Gaps = 10/320 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
           ++ P YGADVLRLWV+SVDYT DV IG  +LRQM+D+YRK+RGTLR+LLGNL D+    +
Sbjct: 669 KQQPAYGADVLRLWVASVDYTSDVAIGSSILRQMADMYRKVRGTLRFLLGNLADYDPQVH 728

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           ++ Y+ LP +D+Y LF++  ++  +  +Y+SYQFFK+FQ +QRF+IVDLSNFY D AKDR
Sbjct: 729 AVPYEQLPSLDRYMLFRVSQLMNEVSAAYDSYQFFKVFQSLQRFVIVDLSNFYLDTAKDR 788

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY    +   RR+CQTVL A L S++  +AP++PHLAED W NLP+A        A  VF
Sbjct: 789 LYIRRDSDPARRACQTVLDALLRSLMAALAPLVPHLAEDAWLNLPYA------RPAASVF 842

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ++ W   +  W      E+  W    E+R   N VLE ART KLIG+ LEAKV L   D 
Sbjct: 843 QAGWVAPEPAWSGLRPEEVAAWSLAGEVRDAANVVLERARTSKLIGAGLEAKVVLHVSDP 902

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY-LVEGKDKVWIG 630
           + A+ L  +  +++ AD L+ + I+SQVE++  +   + +  P+        G  ++ +G
Sbjct: 903 AAAAVLSSLDASRNGADELRYVLIVSQVELV--SDAAVAKLCPFHETIPSTRGAGEITVG 960

Query: 631 VSRAEGSKCERCWNYSTQVG 650
           V+RA G+KC RCWNYS  VG
Sbjct: 961 VTRAGGTKCARCWNYSLLVG 980


>gi|443477054|ref|ZP_21066927.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
 gi|443017893|gb|ELS32243.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
          Length = 1003

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/329 (51%), Positives = 213/329 (64%), Gaps = 29/329 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GVW D+ N Y TL PEYEAAQI VFG+M+L+GYIYRG KPV+WSPSS TALAEAEL
Sbjct: 158 FKRWGVWGDYENAYYTLKPEYEAAQIGVFGRMTLKGYIYRGLKPVYWSPSSHTALAEAEL 217

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EYPE HVSRSIY  F + +       + +  L +L   +WTTTPWT+PAN  ++ N  L 
Sbjct: 218 EYPENHVSRSIYVAFPVTNPSEKLKAIAD--LTNLHAVIWTTTPWTIPANLGISANPHLS 275

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y++V         +A   N                 IVA++LV  L A +   L +K T 
Sbjct: 276 YSIV---------AAGDKN----------------YIVATELVEKLAATFEEALEVKYTF 310

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LE     HP+ +R  P+V+ GD++T ESGTGLVHTAP HGQ+D++   KY L ++S
Sbjct: 311 KGDVLEGAIAKHPIVDRPSPIVL-GDHVTAESGTGLVHTAPNHGQDDFIVGKKYNLGMIS 369

Query: 244 PVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            VDD G F E+AG   +GL VL +GN  VV+ L    +LI EE Y HKYPYDWRTKKP I
Sbjct: 370 LVDDRGIFNEDAGADLAGLSVLKEGNAKVVEILTANGTLIKEEAYNHKYPYDWRTKKPVI 429

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            RATEQWFASV+GFR+ A+ +I +V W+P
Sbjct: 430 VRATEQWFASVDGFREEALKSIKEVNWIP 458



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/366 (40%), Positives = 204/366 (55%), Gaps = 43/366 (11%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
            ++ P YGADV+RLW +SVDY GDV IG  +L QMSD+ RK+R T R+LL NL D++    
Sbjct: 647  KKEPPYGADVIRLWAASVDYNGDVPIGKTILAQMSDVSRKIRNTARFLLSNLFDFQPAEH 706

Query: 393  -ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
             + Y DL   D+Y L +L  + K+I E+Y+ +QF + FQ+IQ F  VDLSNFY D+AKDR
Sbjct: 707  LVPYADLTESDRYILHRLAEVTKDITEAYKKFQFSRFFQVIQNFCTVDLSNFYLDIAKDR 766

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY     +  RRSCQTVL   L +I + IAP+L H AED+WQ+LP+       +  + VF
Sbjct: 767  LYISAPNAARRRSCQTVLMYCLETIAKAIAPVLAHTAEDIWQHLPYP------APTKSVF 820

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            +S W ++D +W    +     W ++  +R  VN+VLE  R  KLIGSSLEAK+ +     
Sbjct: 821  QSGWFIVDPEWHKPELAAK--WNRLRIVRNRVNRVLETKRQEKLIGSSLEAKIKIEVSPD 878

Query: 572  SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-----------PYSGEYL 620
             L   L+ +    ++   L+ +FI SQVE +   P   I ++           P   +  
Sbjct: 879  KLQQDLKSL----NENHQLEDLFICSQVEFVTGLPVNPIDDLIVLVDEHEKIFPLEADVT 934

Query: 621  VEG--------------KDK-----VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSR 661
             E                DK     V I V +A+G KC RC+NYST +G   EHP +C R
Sbjct: 935  SENSKIIFDPSRTKPSDNDKYRFEGVRIVVEKADGEKCPRCYNYSTHIGESAEHPHICDR 994

Query: 662  CYEVLA 667
            C   LA
Sbjct: 995  CVSALA 1000


>gi|452820529|gb|EME27570.1| isoleucyl-tRNA synthetase [Galdieria sulphuraria]
          Length = 1039

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 167/337 (49%), Positives = 222/337 (65%), Gaps = 33/337 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           +SFKR+G+W  W+ PYLT+ PEYEAAQI+VFG++ L+G+IYR +KPVHWSPSS+TALAEA
Sbjct: 212 SSFKRFGIWGFWSRPYLTMSPEYEAAQIQVFGELFLRGFIYRARKPVHWSPSSKTALAEA 271

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E H+S +IY  FR ++   S  G L      L L +WTTTPWT+PAN AVAVN  
Sbjct: 272 ELEYSEDHISTAIYVSFR-IAHVNSLLGDLPISSNSLELVIWTTTPWTLPANEAVAVNPH 330

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP----TLEAKW-GTK 176
           + Y+++E+  L                         F+IVA D +      L+ +W   +
Sbjct: 331 MTYSLIEVARL-----------------------NRFLIVAKDCLKRVREKLKLEWQDCR 367

Query: 177 LVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
            V++ T  G  L   +Y HP + ++ C VV GG+YIT+ESGTGLVHTAPGHG+ED+V   
Sbjct: 368 QVLEWT--GESLVGIKYYHPIIKDKICRVVRGGNYITSESGTGLVHTAPGHGEEDFVVGK 425

Query: 236 KYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYD 294
           +  LPI  PVD+ G FT+EAG+   G  VLG GN  V++ ++    L+ +E Y HKYPYD
Sbjct: 426 RENLPISCPVDENGMFTKEAGEVLFGHSVLGQGNKLVLELVENMNLLLAKECYRHKYPYD 485

Query: 295 WRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           WRTK+PTI+R TEQWFAS+E FR+  +D+I QV W+P
Sbjct: 486 WRTKEPTIYRTTEQWFASLENFRKEVLDSIDQVTWIP 522



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/343 (44%), Positives = 211/343 (61%), Gaps = 19/343 (5%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 391
            ++ P YGADVLRLWV+SVDY  +V+IGPQ++RQ++DIYRK+R TLR+++GNL+D+R   N
Sbjct: 701  KKDPAYGADVLRLWVASVDYRNEVLIGPQIIRQVADIYRKIRNTLRFMVGNLYDFRKDVN 760

Query: 392  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            +I   +LP +D Y L       K++  +YE Y F  I+Q IQR  I +LSNFY D++KDR
Sbjct: 761  AIPLAELPQLDIYMLTVFNKFKKSVESAYERYDFTSIYQAIQRLCITELSNFYLDISKDR 820

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY      + RRSCQTVL   L  +VR++AP++PH AED+WQ   F        A   VF
Sbjct: 821  LYVSLPDDYRRRSCQTVLHMILEDLVRIVAPLIPHTAEDLWQCFEFR-----RDACLSVF 875

Query: 512  ESKWPVLDEKWRTFPVGEI--YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF-- 567
            +S W + +EK    P+G     FW  +  LR +VNK LE AR  +LIGSSLE +V ++  
Sbjct: 876  QSGW-LSNEK---VPLGHYPDTFWENVRLLRDDVNKCLEKAREEQLIGSSLEGRVGIYFN 931

Query: 568  -TDDA---SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
              DD    S    LR++  + +  D L+ +F++SQVE + S    L R   Y+ + +   
Sbjct: 932  SKDDEKHISFCHHLRQLSNSSNQVDQLEYLFLVSQVEFMESK-ESLYRVYSYARDSVHSQ 990

Query: 624  KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D   IGVS+A G KC RCWN+ST V    +HP LC RC  V+
Sbjct: 991  LDCYSIGVSKALGHKCFRCWNFSTSVQQNEKHPELCHRCISVV 1033


>gi|254526098|ref|ZP_05138150.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537522|gb|EEE39975.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 965

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 171/342 (50%), Positives = 220/342 (64%), Gaps = 37/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLL-----------NEFLPDLGLAVWTTTPWT 109
           AELEYP+ H S+SIY   ++   P     LL           N FL +  + +WTTTPWT
Sbjct: 209 AELEYPDDHYSKSIYVSLKITKVPDKV--LLKGCQENPNIKKNSFLSNSFITIWTTTPWT 266

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AVAVN K+ Y  V                       + + K++F+  A +L   +
Sbjct: 267 IPANEAVAVNPKISYVFV-----------------------IDEDKRIFLF-AKNLFSEI 302

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
             K+     I   + GS LEN  Y HP  N+ C +VIGGD+ITTESGTG+VHTAPGHG +
Sbjct: 303 SEKFNKIFNILFEVKGSSLENIEYHHPTKNKNCRIVIGGDFITTESGTGIVHTAPGHGID 362

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+    KY LPI   VD++G   E +G+F G +VL D N  +++YL  +  L+++E Y+H
Sbjct: 363 DFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSNVLKDANDLIIEYLKGKNLLLLQENYKH 422

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFAS++GFR +A+ AI  V+W+P
Sbjct: 423 RYPYDWRTKKPTIFRATEQWFASLDGFRSSALKAIEDVEWMP 464



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/385 (37%), Positives = 216/385 (56%), Gaps = 34/385 (8%)

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW 346
             KP   R     FA  E  R+ +  ++G V  V P          +  P YGADVLRLW
Sbjct: 602 NNKPPYKRVLTHGFALDENGRKMS-KSLGNV--VDPNIIINGGNNKKSEPAYGADVLRLW 658

Query: 347 VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYA 405
           VSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S   D LP++DQ+ 
Sbjct: 659 VSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWM 718

Query: 406 LFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSC 465
           L +L  +   I  +YESY+F + FQI+Q F +VDLSNFY D+AKDRLY    + F RRSC
Sbjct: 719 LGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRRSC 778

Query: 466 QTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTF 525
           Q V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF+  WP+  + W+  
Sbjct: 779 QFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVFQRGWPIFSQSWKNE 832

Query: 526 PVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCT-AK 584
            + +      +  LR E+NK +E  R  ++IG++LE +V     D  +   L  +     
Sbjct: 833 SLNQ--HITNLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPKDKFVKDSLTWLRKYGN 890

Query: 585 HDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCW 643
            D D  +   I+S  +V+ +   N LI +    GE          I + +A G KC+RCW
Sbjct: 891 EDVDLFRDWLIVSNFQVVSNLADNSLIIDSNELGE----------IQILKARGLKCDRCW 940

Query: 644 NYSTQVGSFVEHPTLCSRCYEVLAV 668
           +Y  ++ S + +  LC RC +++ +
Sbjct: 941 HYQKEIVSGIHNTKLCKRCAKIINL 965


>gi|157412597|ref|YP_001483463.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980057|sp|A8G2P6.1|SYI_PROM2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|157387172|gb|ABV49877.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 965

 Score =  321 bits (822), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 172/342 (50%), Positives = 219/342 (64%), Gaps = 37/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN-----------EFLPDLGLAVWTTTPWT 109
           AELEYP+ H S+SIY   ++   P     LL             FL +  + +WTTTPWT
Sbjct: 209 AELEYPDDHYSKSIYVSLKITKVPDKV--LLKGCQENPNIKKESFLGNSFITIWTTTPWT 266

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AVAVN K+ Y  V                       + + K++F+  A +L   +
Sbjct: 267 IPANEAVAVNPKISYVFV-----------------------IDEDKRIFLF-AKNLFSEI 302

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
             K+     I   + GS LEN  Y HP  N+ C +VIGGDYITTESGTG+VHTAPGHG +
Sbjct: 303 SEKFNKIFKILFEVKGSSLENIEYQHPTKNKNCRIVIGGDYITTESGTGIVHTAPGHGID 362

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+    KY LPI   VD++G   E +G+F G +VL D N  +++YL  +  L+++E Y+H
Sbjct: 363 DFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSNVLKDSNDLIIEYLKGKNLLLLQENYKH 422

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASV+GFR +A+ AI  V+W+P
Sbjct: 423 RYPYDWRTKKPTIFRATEQWFASVDGFRSSALKAIEDVEWMP 464



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/385 (37%), Positives = 216/385 (56%), Gaps = 34/385 (8%)

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW 346
             KP   R     FA  E  R+ +  ++G V  V P          +  P YGADVLRLW
Sbjct: 602 NNKPPYKRVLTHGFALDENGRKMS-KSLGNV--VDPNIIINGGNNKKSEPAYGADVLRLW 658

Query: 347 VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYA 405
           VSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S   D LP++DQ+ 
Sbjct: 659 VSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWM 718

Query: 406 LFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSC 465
           L +L  +   I  +YESY+F + FQI+Q F +VDLSNFY D+AKDRLY    + F RRSC
Sbjct: 719 LGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDRLYVSAKSQFRRRSC 778

Query: 466 QTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTF 525
           Q V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF+  WP+  + W+  
Sbjct: 779 QFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVFQRGWPIFSQSWKNE 832

Query: 526 PVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCT-AK 584
            + +      +  LR E+NK +E  R  ++IG++LE +V     D  +   L  +     
Sbjct: 833 SLNQ--HITNLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPKDKFVKDSLNWLRKFGN 890

Query: 585 HDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCW 643
            D D  +   I+S  +V+     N LI +    GE          I + +A G KC+RCW
Sbjct: 891 EDVDLFRDWLIVSNFQVVSYLAENSLIIDSNELGE----------IQILKARGLKCDRCW 940

Query: 644 NYSTQVGSFVEHPTLCSRCYEVLAV 668
           +Y  ++ S +++  LC RC +++ +
Sbjct: 941 HYQKEIVSGIQNTKLCKRCAKIINL 965


>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166229756|sp|A2BP36.1|SYI_PROMS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 968

 Score =  318 bits (816), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 171/342 (50%), Positives = 219/342 (64%), Gaps = 37/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-----------VWTTTPWT 109
           AELEYP+ H S+SIY   ++     S   LLN    +L +            +WTTTPWT
Sbjct: 209 AELEYPDEHYSKSIYISLKITKI--SEEILLNFVQENLNIKREFFENNSFITIWTTTPWT 266

Query: 110 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
           +PAN AVAVN K++Y                          + ++K++++  A DL   +
Sbjct: 267 IPANEAVAVNPKIKYVFA-----------------------IDEEKRIYLF-AKDLSTEI 302

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
             K+   L +   + GS LEN  Y HP  N+ C +VIGGDYITTESGTG+VHTAPGHG +
Sbjct: 303 SNKFNKDLKVLLEVKGSQLENIEYQHPSKNKNCRIVIGGDYITTESGTGIVHTAPGHGVD 362

Query: 230 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           D+    KY LPI   VD++G   E +G+F G +VL D N  +++YL     L+++E Y+H
Sbjct: 363 DFNVGQKYDLPITCVVDEKGNLNEYSGQFQGSNVLKDANDLIIEYLKGNNLLLLQENYKH 422

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +YPYDWRTKKPTIFRATEQWFASV GFR +A+ AI  V+W+P
Sbjct: 423 RYPYDWRTKKPTIFRATEQWFASVNGFRSSALQAIEDVEWMP 464



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 201/337 (59%), Gaps = 21/337 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSYE 707

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVFQRG 821

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP+  + W+   + E      +  LR E+NK +E  R  ++IG++LE +V    +D  + 
Sbjct: 822 WPIFAQSWKNQILNE--HIANLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPEDKVVK 879

Query: 575 SRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             L  +      D D  +   I+S  +V+     N LI +    G+          I + 
Sbjct: 880 DSLIWLQEFGSQDVDLFRDWLIVSNFQVVSDLVENSLIIDNNALGK----------IQII 929

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           +A+G KC+RCW+Y  +  + +++  LC RC  ++ ++
Sbjct: 930 KAQGQKCDRCWHYQKETFNGIQNTKLCKRCSNIINLE 966


>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229753|sp|A3PAV8.1|SYI_PROM0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 968

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 161/337 (47%), Positives = 206/337 (61%), Gaps = 33/337 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+G+W DWNNPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAEAEL
Sbjct: 152 FKRWGIWGDWNNPYLTLKKSYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAEAEL 211

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTS--------GLLNEFLPDLGLAVWTTTPWTVP-ANA 114
           EYP+ H S+SIY   ++   P             +  +F  +       TT      AN 
Sbjct: 212 EYPDDHYSKSIYVSLKITKIPEEIQLNFIQKNINIKKDFFQNNSFITIWTTTPWTIPANE 271

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           AVAVN K+ Y                          + ++K++++  A DL   +  K+ 
Sbjct: 272 AVAVNPKINYIFA-----------------------IDEEKRIYLF-AKDLCSEISKKFN 307

Query: 175 TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
               +   + GS LEN  Y HP  N+ C +VIGGDYITTESGTG+VHTAPGHG +D+   
Sbjct: 308 KDFKVLLEVKGSKLENIEYQHPSKNKNCRIVIGGDYITTESGTGIVHTAPGHGIDDFNVG 367

Query: 235 LKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYD 294
            KY LPI   VD++G   E +G+F G +VL D N  +++YL     L+++E Y+H+YPYD
Sbjct: 368 QKYDLPITCVVDEKGNLNEYSGQFKGSNVLKDANDLIIEYLKVNNLLLLQENYKHRYPYD 427

Query: 295 WRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           WRTKKPTIFRATEQWFASV GFR +A+ AI  V+W+P
Sbjct: 428 WRTKKPTIFRATEQWFASVNGFRSSALKAIEDVEWMP 464



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 203/339 (59%), Gaps = 21/339 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSFE 707

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYS------TKEKSVFQRG 821

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP+  + W+   + E      +  LR E+NK +E  R  ++IG++LE +V    +D +L 
Sbjct: 822 WPIFSQSWKNKILNEHI--SNLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPEDKALK 879

Query: 575 SRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             L  +      D D  +   I+S  +V+     N L  +    G+          I ++
Sbjct: 880 DSLTWLKEFGNQDVDLFRDWLIVSNFQVVSDLVDNSLATDNNALGK----------IQIN 929

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI 671
           +A+G KC+RCW+Y  +  + +++  LC RC  ++  + I
Sbjct: 930 KAQGQKCDRCWHYQKETFNGIQNTKLCKRCSNIINFEFI 968


>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554705|sp|Q31CU4.1|SYI_PROM9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 968

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 154/340 (45%), Positives = 206/340 (60%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR+G+W +W+NPYLTL   YE+AQI VFG+M L GYIYRG KPVHWSPSSRTALAE
Sbjct: 149 MEGFKRWGIWGNWDNPYLTLKKSYESAQIGVFGKMFLNGYIYRGLKPVHWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVP--------- 111
           AELEYP+ H S+SIY   ++            +  P+     + +  +            
Sbjct: 209 AELEYPDEHYSKSIYVSLKITKLSDEILLKFYQENPNFKKDFFLSNSFITIWTTTPWTIP 268

Query: 112 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 171
           AN AVAVN K+ Y                          + ++K+++++ A +L   +  
Sbjct: 269 ANEAVAVNPKINYVFA-----------------------IDEEKRIYLL-AKELSSEISN 304

Query: 172 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
           K+   L     + G  LE+  Y HP  N+ C +VIGGDYIT ESGTG+VHTAPGHG +D+
Sbjct: 305 KFNKDLTTLLEVKGVTLEDIEYQHPTKNKNCRIVIGGDYITIESGTGIVHTAPGHGIDDF 364

Query: 232 VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
               KY LP    VD++G   E +G+F G +VL D N  ++ YL+E+  L+++E Y+H+Y
Sbjct: 365 NVGRKYDLPTTCVVDEKGNLNEYSGQFQGSNVLKDANDLIIDYLEEKDLLLLQENYKHRY 424

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKPTIFRATEQWFASV GFR +A+ AI  V+W+P
Sbjct: 425 PYDWRTKKPTIFRATEQWFASVNGFRSSALKAIEDVEWIP 464



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 200/337 (59%), Gaps = 21/337 (6%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFE 707

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNVPYS------TKEKSVFQRG 821

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           WP   + W+   + E      +  LR E+NK +E  R  ++IG++LE +V     D  + 
Sbjct: 822 WPNFSQSWKNEILNE--HIANLRNLRVEINKAIEGCRNKQIIGAALETEVNYLPKDKVVK 879

Query: 575 SRLREMCT-AKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             L  +      + D  +   I+S  +V+     N LI          ++  +   I + 
Sbjct: 880 DSLTWLKKFGNEEVDLFRDWLIVSNFQVVSELAKNSLI----------IDNNEIGKIQIL 929

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           +A G KC+RCW+Y  ++ S +++  LC RC  ++ ++
Sbjct: 930 KAHGQKCDRCWHYQEEIFSGIQNTKLCKRCSHIINLE 966


>gi|328875644|gb|EGG24008.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1038

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 162/391 (41%), Positives = 231/391 (59%), Gaps = 39/391 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MASF+ +G+  DW  PY+T+ P+YE AQ+E F  M  +GY+YRG KPVHWSPSSRTALA+
Sbjct: 206 MASFRSWGIMGDWEAPYITMAPDYEVAQLETFYDMYKRGYVYRGIKPVHWSPSSRTALAD 265

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS+SI+  F +  +  +           +   +WTTTPWT+PAN A+ VNA
Sbjct: 266 AELEYNDNHVSQSIFVKFAVTQSSNAHILAAMSRGDKVHAVIWTTTPWTIPANQAICVNA 325

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           +L+Y++V               K  +  N L       +IV+S+ + +L + +G  L + 
Sbjct: 326 QLEYSLV---------------KHDKIDNHL-------LIVSSERLASLRSAFGLDLEVV 363

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G+ LE  + VHP  NR  PV++ GD++   SG+GLVHTAPGHG ED+    ++ + 
Sbjct: 364 ATFTGAQLEGTQTVHPQYNRPSPVLL-GDHVVAGSGSGLVHTAPGHGMEDFAICAQHNIA 422

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           +LSPVDDEG+FT+E G KF G++VLG GN AV++ L +   L+ +E Y HKYPYDWRTKK
Sbjct: 423 VLSPVDDEGRFTKEVGDKFVGMEVLGGGNTAVIEDLSQLGCLLHQEKYTHKYPYDWRTKK 482

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADV----------LRLW--- 346
           P + R T QWF  +    Q+A+ AI  V  VPP  +    + V           R W   
Sbjct: 483 PILIRTTRQWFVDLTDVHQSAIQAINAVNMVPPSGSNRLSSMVGRRSDWCISRQRFWGVP 542

Query: 347 --VSSVDYTGDVMIGPQVLRQMSDIYRKLRG 375
             V     TG+ +I  + ++ + +++RK  G
Sbjct: 543 IPVFYEKETGEALINDETIQHILEVFRKHGG 573



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 188/355 (52%), Gaps = 43/355 (12%)

Query: 334  EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NS 392
            E P YG D+LR+WV+S DY+ D+ IGP +L ++ +  +K+R T++++LG+  D+    N 
Sbjct: 700  ENPAYGVDMLRMWVASSDYSRDISIGPNILIKLLENIKKIRNTVKFMLGSNFDFNPELNQ 759

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            I Y+ L  +D++AL ++  + +N  + Y+ +Q+ K  Q +  F + ++S+FYFDV K RL
Sbjct: 760  IDYNQLSDLDKFALHKVFLLEQNASKYYDQFQYSKAMQELNIF-VNEISSFYFDVIKQRL 818

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIV-RVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            Y     +  RRS QTVL  H+L +V +++AP+  H +ED++ N  F Y     S  E VF
Sbjct: 819  YVESKDNILRRSSQTVL-FHMLDVVNKILAPVTVHTSEDIY-NHQFKYR----SPKESVF 872

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TD 569
               W   +E+W    + E   W  I+ LR EVN++L++ R   +IG   EA + +    D
Sbjct: 873  TQGWCKFEEQWYNPELFEK--WNHIITLRNEVNRLLQIVRDKGVIGRPDEATITIMVTND 930

Query: 570  DASLASRLREMCTAKHDADTLQRIFIISQVEVLP------------STPNGLIRNIPYSG 617
               L + L  + +       L+ IF +S V V P             T + LI N P+ G
Sbjct: 931  QVPLYTHLTSLQSQ------LEDIFCVSGVIVEPYNAPPQLEGEAAMTSDVLITN-PHGG 983

Query: 618  EYLVE---GKDKV---WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + L +   G DKV    I   ++   KC RCW + ++     +  TLC  C + L
Sbjct: 984  QTLYQLNGGIDKVARFQITCQKSTQHKCPRCWRHQSE-----KEATLCQHCVKRL 1033


>gi|241865267|gb|ACS68711.1| isoleucyl-tRNA synthetase [Sonneratia alba]
 gi|241865500|gb|ACS68782.1| isoleucyl-tRNA synthetase [Sonneratia alba]
          Length = 183

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/181 (77%), Positives = 161/181 (88%)

Query: 401 IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSF 460
           IDQ+ALFQLEN+VKNI+ESYE+YQFFKIFQI+QRF+IVDLSNFYFDVAKDRLY GGT+SF
Sbjct: 2   IDQHALFQLENVVKNIKESYENYQFFKIFQIMQRFVIVDLSNFYFDVAKDRLYVGGTSSF 61

Query: 461 TRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDE 520
           TRRSCQTVL+AHLLSI RVIAPILPHLAEDVWQNLPF Y LEDGS A FVF+++WP  +E
Sbjct: 62  TRRSCQTVLAAHLLSISRVIAPILPHLAEDVWQNLPFQYNLEDGSTARFVFDTRWPSSNE 121

Query: 521 KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREM 580
           +W +    EI FWGKILELRTEVNKVLE+AR GKLIGSSL+AKV L+T D +LAS+L  +
Sbjct: 122 EWLSLSPREIDFWGKILELRTEVNKVLEIARGGKLIGSSLDAKVSLYTSDENLASQLYGI 181

Query: 581 C 581
           C
Sbjct: 182 C 182


>gi|440791598|gb|ELR12836.1| isoleucine-tRNA ligase [Acanthamoeba castellanii str. Neff]
          Length = 978

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 207/331 (62%), Gaps = 25/331 (7%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV  +WNNPY T DP+YEA+Q+ +F  +  +GY+YRG KPV WSPSSRTALAE
Sbjct: 164 MKGFRSWGVMGEWNNPYATKDPKYEASQLGLFLDLYKKGYVYRGLKPVIWSPSSRTALAE 223

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY + HVS S+Y  F  V    + +G L+ F  +L   +WTTTPWT+PAN A+ VN 
Sbjct: 224 AEVEYSDTHVSPSVYVAFS-VKHLANKAGELSRF-NNLHALIWTTTPWTIPANMAICVNP 281

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            ++Y+VV+                        DQ     ++ASD +  ++     ++ + 
Sbjct: 282 NIEYSVVKT----------------------TDQHDKHYVIASDRLQAMQELLKQEIEVC 319

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L GS L +  YVHP+D R+  V + G ++TTESGTGLVHTAP HG +DYV    +G+P
Sbjct: 320 ARLPGSSLADTIYVHPLDGRELKV-LPGTHVTTESGTGLVHTAPAHGADDYVVCKAHGIP 378

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           + S VDD GKFT++  +F+G  VLG GN  V++ L ++ +L+ +  Y HKYPYDWRTKKP
Sbjct: 379 LRSFVDDNGKFTQDLPEFAGKFVLGPGNELVIQALTDKGALVHQHKYTHKYPYDWRTKKP 438

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RATEQWF  ++     A+D I +V+ VP
Sbjct: 439 IIMRATEQWFVDLKDVVAPALDEISRVQMVP 469



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 185/352 (52%), Gaps = 35/352 (9%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++  G G DVLR+WV+S DY+ D +IGP V+ +M    RKLR T R+LLGNL D+    +
Sbjct: 645 EKKAGCGVDVLRMWVASSDYSRDTLIGPVVINKMKGSLRKLRNTARFLLGNLADYDRRQA 704

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           I  DDL  ID+Y L +L      +   Y+ YQF K+++ +  F  VDLS FYF+V KDRL
Sbjct: 705 IPDDDLTGIDRYMLHKLHEFSHGVTTDYDDYQFSKVYRGLVNFATVDLSAFYFEVVKDRL 764

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y   T S  RRS QTVL   L ++   +API P  A+D+ +     +  +  + A  VF 
Sbjct: 765 YADATDSLRRRSTQTVLRHTLDALTAALAPIAPFTAQDIHR-----HDAQAAAVAPNVFH 819

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT--DD 570
            +WP   ++W+    G    W  I ++R++  KVLE AR  K+IGSSL+A+V L+T  DD
Sbjct: 820 LEWPRAGDQWKQD--GMAQQWDAIRDVRSQTYKVLEAARAHKVIGSSLDARVRLYTGSDD 877

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN-GLIRNIPYSGEYLVEGKDKVWI 629
             +A  L E  +     D L  I + S V+++P  P   ++ + P   + L  G    ++
Sbjct: 878 NQVARWLAEPTS-----DELAEILVTSAVDLVPEAPAFEVVDDRPPQAD-LTSGPTPSFV 931

Query: 630 G--------------VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G               +     KC RCW Y++      E  T C RC + +A
Sbjct: 932 GGGLVHAVPVGVEVVPASMHAVKCPRCWRYAS-----AEENTPCPRCAQAMA 978


>gi|354558727|ref|ZP_08977981.1| Isoleucyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
           15288]
 gi|353545789|gb|EHC15239.1| Isoleucyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
           15288]
          Length = 923

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 205/329 (62%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW++PYLT   EYEA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 GFKRLGVRGDWDHPYLTFHKEYEAEQIGVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S +IY  F    A     G+LNE   +  + +WTTTPWT+PAN A++++   
Sbjct: 199 IEYAD-QTSSAIYVKF----AVKEGKGILNE--ANTYVVIWTTTPWTIPANVAISLHPDF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YA V++     GD                       IVA  L+  L A W   L ++KT
Sbjct: 252 TYAQVKV-----GDE--------------------HWIVAEGLLERLRALWNLALPVEKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE     HP+ +R+  ++I G+++T E+GTG VHTAPGHG++D++   KY LP++
Sbjct: 287 FVGKDLELITCQHPLLDRES-LLILGEHVTLEAGTGCVHTAPGHGEDDFIVGKKYDLPVI 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +GKFTEE G + GL V G  N  V++ L +  +L++EE   H YP+ WR K P I
Sbjct: 346 CPVDHQGKFTEEGGPYVGLKV-GKANPIVIEDLTKANALVLEEKITHSYPHCWRCKNPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS++GFR+ A++ I QV+W+P
Sbjct: 405 FRATEQWFASIDGFRKEALEQIDQVQWIP 433



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/337 (39%), Positives = 187/337 (55%), Gaps = 23/337 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWV+S DY  DV    ++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVVNQMGADILRLWVASADYKNDVAASQRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y +LP ID++AL QL  ++  + E YE Y+F  ++  +  F  +++S  Y D+AK
Sbjct: 665 KDQVPYAELPEIDRWALLQLGKVIDRVLEGYEKYEFHWVYHTVHNFCTIEMSAIYLDIAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RRS QTVL   L ++VR+IAP+L   A+++W   P+   + +G   + 
Sbjct: 725 DRLYVEGKKSTLRRSAQTVLYQSLDALVRLIAPVLTFTADEIW---PYVSGVAEGVNIQV 781

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
               K P +  +W    +G    W +IL LR EV K LE AR  KLI   L A+V L+T 
Sbjct: 782 ---EKMPTVKPEWMDEQLGAK--WDQILSLRAEVTKALEKARQDKLINHPLTAQVDLYT- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            A L   L+ +         L  IFI+S VE+   T    +         + E  + + I
Sbjct: 836 PADLYEFLQGV-------PNLAEIFIVSDVELHQPTEETPVEAT------VAEDIEGLRI 882

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            VS A G KCERCW Y T+VG    HPTLC RC  V+
Sbjct: 883 KVSSAAGEKCERCWMYHTEVGKDEAHPTLCPRCASVV 919


>gi|281208129|gb|EFA82307.1| isoleucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 993

 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 150/335 (44%), Positives = 205/335 (61%), Gaps = 31/335 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           + SFK +G+  DW+N Y T++P YE +Q+E F +M L+GYIYRG KPVHWSPSS+TALA+
Sbjct: 167 LDSFKAWGIVGDWDNHYRTMEPGYEVSQLETFYEMFLKGYIYRGVKPVHWSPSSKTALAD 226

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS+SI+  F M      +SGL       L   +WTTTPWT+PAN A+ VNA
Sbjct: 227 AELEYNEQHVSKSIFLKFAMKKV---SSGLQRFDNGKLNAVIWTTTPWTIPANLAICVNA 283

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI- 179
            L Y VVE                       +D ++  I  + + + +L  ++   L I 
Sbjct: 284 GLDYVVVE----------------------GRDNERYLI--SRERLESLREQFKLPLPIV 319

Query: 180 --KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
              + + G+DL      HP+  R  P+++G +++ T SGTGLVHTAPGHG ED+    ++
Sbjct: 320 EGAEAIKGADLFGTVTAHPMYGRDSPILLG-EHVVTGSGTGLVHTAPGHGVEDFAICQQH 378

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            +  +SPVDD G FTE+ G+F+GL+VLG GN AV++ L    S++  E Y HKYPYDWRT
Sbjct: 379 KIEPISPVDDNGCFTEQVGRFAGLEVLGAGNDAVIEELKSLNSVVHSENYVHKYPYDWRT 438

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           KKPTI R T QWF  + G +  A+ +I  +  VPP
Sbjct: 439 KKPTIIRTTRQWFVDLSGVQSLAVKSIENINMVPP 473



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 40/355 (11%)

Query: 334 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNS 392
           E P YG D+LR+W+++ DYT D+ +GP +L ++ D  +K+R T+RY+LG   D++   +S
Sbjct: 656 ENPAYGVDMLRMWIATSDYTKDISVGPTILTKVLDNVKKIRNTVRYMLGANFDFQPEKHS 715

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y  L  ID+YAL ++  + +N  + Y+ + F K+ Q +  F   ++S FYFD+ K RL
Sbjct: 716 VPYHQLSEIDKYALHKVYVLSENATKYYDQFHFQKVTQEVINF-CHEISAFYFDIIKQRL 774

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y     +  RRS QTVL   L  + ++IAPI  H  ED++++  + Y        E VF 
Sbjct: 775 YVEAPDNNLRRSSQTVLFEMLDVVNKIIAPIAIHTCEDIYKH-QYKYR----EPTESVFT 829

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
             W  +  +W    +  +  WG I+ +R   N++L+  R   +IG   E  + L      
Sbjct: 830 QGWTRVKPEWNNAQL--LDQWGCIITVRDLFNRLLQEVRDKGIIGRPDETMITL-----K 882

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEVL---------PSTPN-GLIRNIPYSGEYLVE 622
           ++S   +    K +   L+ IF +S+VE++         P  P+   I  +   G++  E
Sbjct: 883 VSSPFYDHL--KSNQSQLEDIFCVSKVELVHDQSVDIKEPEQPSTSRISVLGDGGDFNCE 940

Query: 623 GKDKVW---------IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
               +          I + +++  KC RCW + ++  S V     C  C   L++
Sbjct: 941 QSSVISFNGQLGLVDITIRKSDKHKCPRCWRHQSEQESHV-----CPSCVSRLSL 990


>gi|339009203|ref|ZP_08641775.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
 gi|338773681|gb|EGP33212.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
          Length = 928

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 156/329 (47%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEAAQI VFG M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 142 FKRLGIRGDWENPYVTLLPEYEAAQIRVFGAMATKGYIYKGLRCVYWSPSSETALADAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G L++   D G+ +WTTTPWT+PAN A+++N  L+
Sbjct: 202 EYHDKR-SASIYVRFMVKDG----KGKLDQ---DTGVIIWTTTPWTLPANKAISLNPDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV           A  NK                +VAS LV ++  + G + V   +T
Sbjct: 254 YSVV----------IADGNK---------------YVVASGLVESVTKEIGWEQVETVQT 288

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GSDLE     HP  +R  P+++ GD++T ++GTG VHTAPGHG++D+  S KY + +L
Sbjct: 289 FKGSDLEGIETQHPFYDRISPIIL-GDHVTLDAGTGCVHTAPGHGEDDFNVSKKYNIEVL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T+EA  F GL    D N  V + L E  +L+      H YP+DWRTKKP I
Sbjct: 348 CPVDHEGKMTQEAPGFEGL-FYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPII 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFR   ++AI +VKW P
Sbjct: 407 FRATEQWFASVEGFRSQMLEAIKEVKWTP 435



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 25/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWVSSVDY  D  I   +L Q +++YRK+R T R+LLGNL  +  
Sbjct: 606 VPKEVTDKLGADILRLWVSSVDYQSDHRISDAILAQNAEVYRKIRNTFRFLLGNLAGFDP 665

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
           + + + YD LP +D++ L +   +VK  R++Y+ YQF  ++Q +  F  ++LS+FY D++
Sbjct: 666 MKDRVEYDRLPELDRFMLAKAAEMVKRTRKAYDEYQFHTVYQTVHNFCTIELSSFYMDIS 725

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RR+ QTV+   LL +V++++PI+PH A++VWQ +P       G    
Sbjct: 726 KDRLYVEAPDSEERRAAQTVMYDILLDLVKLLSPIIPHTADEVWQFIP-------GVTEA 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P ++E+   F   E   W   LE+R EV K +E AR  K+ G+S++A++ L+ 
Sbjct: 779 SVQLTDMPEVNEQ-HLFSEEEQARWTSFLEVRDEVLKAMEEARRNKVFGNSVDARLVLY- 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                    +E+     D + L  +FI++ +E+  +        +   G  +V       
Sbjct: 837 ------PHTQEVYQVLMDMEYLADLFIVADIEMHEAGTEAPAEAVKLEGISVV------- 883

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             V  AEG KCERC      VG+   HPT C RC  ++
Sbjct: 884 --VLAAEGGKCERCRVVKEDVGTVESHPTTCERCATIV 919


>gi|335040585|ref|ZP_08533711.1| Isoleucyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
 gi|334179555|gb|EGL82194.1| Isoleucyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
          Length = 926

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 204/329 (62%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW+NPY+T  PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE
Sbjct: 139 QFKRLGVLGDWDNPYITFQPEYEARQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++        G L+E   D  + +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 IEYKDKR-SPSIYVAFKVKDG----KGKLDE---DTEVVIWTTTPWTIPANLAIAVHPEF 250

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YA + +                      K QK +      + +       G +L+  KT
Sbjct: 251 EYAQIRV----------------------KGQKYLVAKGLLEQLEKELEWEGYELL--KT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R+ PV++ G+++T ESGTG VHTAPGHG+ED+    KY L +L
Sbjct: 287 FKGEELEYVITRHPLYDRESPVIL-GEHVTLESGTGCVHTAPGHGEEDFYVGQKYNLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD G FTEEA  F GL    + N  + + LDE  +L+      H YP+DWR+KKP I
Sbjct: 346 SPIDDRGYFTEEAPGFEGL-FYDEANKVITQKLDEAGALLKLSFITHSYPHDWRSKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS++GFR+  ++ I +VKWVP
Sbjct: 405 FRATEQWFASIDGFREQMLEEIKKVKWVP 433



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/356 (36%), Positives = 207/356 (58%), Gaps = 28/356 (7%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWVSSV+YT DV I  ++L+Q++++YR
Sbjct: 588 TLDGEGRKMSKSLGNVI-VPQKVMDQLGADILRLWVSSVEYTQDVRISDEILKQIAEVYR 646

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R TLR++LGNL D+    + ++ +D   +D++ + + + ++K +R++YE +QF  ++ 
Sbjct: 647 KIRNTLRFMLGNLADFDPEKDRVAREDWSELDRFIMLKAQQVLKRVRQAYEDFQFHTVYT 706

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS FY DV+KD LYT    S  RR+ QTV+   L  +V+++ PI+PH  E+
Sbjct: 707 TIHNFCTIELSAFYLDVSKDLLYTEAPQSTARRATQTVIYDILTMLVKLLTPIIPHTTEE 766

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW+ +P       G   E V  + +P +DE +  F  G    W   ++ R EV K LEVA
Sbjct: 767 VWKFIP-------GVQEESVQLTDFPEVDESY--FDEGLEQKWNAFMKARDEVLKALEVA 817

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IGSSL AKV+++ D A+    L++          L ++FI+SQV +     +G  
Sbjct: 818 RKEKVIGSSLGAKVHIYPDKANY-ELLKQFT-------NLDKLFIVSQVNL-----HGHE 864

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              P +   L EG   + + V  AEG KCERCW  +   G   +HPTLC RC  ++
Sbjct: 865 DKAPDNALSL-EG---MKVHVQPAEGEKCERCWVVTPDRGQDKQHPTLCPRCASIV 916


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 207/329 (62%), Gaps = 31/329 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QIEVFG+M+ +GYIY+G K V+W  S  TALAEAE+
Sbjct: 140 FKRLGVSGDWDNPYITLTPEYEAKQIEVFGEMAKKGYIYKGLKSVYWCTSCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTS-GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY E   S +IY  F ++    S   G+ +E    +   +WTTTPWT+PAN A+AVN + 
Sbjct: 200 EYAEKK-SHAIYVKFPLIDDKGSLPVGIKHE---GVYAVIWTTTPWTIPANVAIAVNPEF 255

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YA V++ +                        +++++ +  +   ++A       I  T
Sbjct: 256 EYAWVQVNN------------------------EIYLLASGLIDAVVKANGLGDYTILAT 291

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE   + HP  +R+  VV+ GD++T E GTG VHTAPGHGQED+   +KY LP++
Sbjct: 292 VKGEALEGMVFGHPFLDRESVVVL-GDHVTLEQGTGCVHTAPGHGQEDFEIGMKYNLPVI 350

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVD  G+FT E GKF+G+ ++ D NV ++K L E+  L+ +    H+Y + WR K P I
Sbjct: 351 NPVDHSGRFTAEGGKFAGM-LVHDANVPIIKELAERNMLLGKGTIRHQYAHCWRCKNPII 409

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFASVEGFRQ A++AI +V+WVP
Sbjct: 410 YRATEQWFASVEGFRQMALEAIKEVEWVP 438



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 201/365 (55%), Gaps = 36/365 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    +IG V  + PQE    YGAD+LRLWV+S DY  D+ I   +L+QM+++YR
Sbjct: 594 VDGEGRKMSKSIGNV--IYPQEVIKQYGADILRLWVASADYKADIRISNDILKQMAEVYR 651

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T RYL+GNL D+    + + YD L  +D++AL +LE + + + ++Y+ Y+F  ++ 
Sbjct: 652 KIRNTFRYLIGNLADFDPDRDCVGYDQLTELDRWALLRLERVRERVTKAYDEYEFHLLYH 711

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  VDLS  Y D+ KDRLYT    +  RR+ QT +   L ++V ++APIL   AE+
Sbjct: 712 TVHNFCAVDLSAIYLDILKDRLYTAVPHAIERRAAQTAMYEILQTLVVMLAPILTFTAEE 771

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPV-----LDEKWRTFPVGEIYFWGKILELRTEVNK 545
           VWQ +P     +     E V  ++WP      LD +           W +ILE+R+E+ K
Sbjct: 772 VWQYMP-----KRAGMPESVHLAEWPAARPDYLDARLEA-------KWDRILEIRSEITK 819

Query: 546 VLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
            LE AR  K+IG SL+A V ++     LA+ L+E+         L  + I+S+V ++   
Sbjct: 820 ALENARRSKVIGHSLDAAVDIYAGGKELAT-LKEVV-------DLAAVLIVSRVNLIAGV 871

Query: 606 PNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
            N          E       ++ I V+ A+G KCERCW YS  VG   E+ TLC RC +V
Sbjct: 872 ENA-------PPEAFRSADMELAIVVAPAQGDKCERCWIYSETVGQDAEYATLCQRCADV 924

Query: 666 LAVQP 670
           +   P
Sbjct: 925 MRQLP 929


>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 921

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 208/329 (63%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L     D    +WTTTPWT+PAN  + V+  L+
Sbjct: 200 EYKDKR-SPSIYVSFKVKDG----KGVLEN---DEQFIIWTTTPWTLPANLGICVHPNLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+++ +                            +VAS+LV  +    G  +  + KT
Sbjct: 252 YSVLQVGAER-------------------------YVVASELVEQVAKTLGFEEYEVVKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +L+N    HP+  R   V++ GD++TT++GTG VHTAPGHG++D++ S+KYGL +L
Sbjct: 287 LKGKELDNVVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  TEEA  F GL    D N A+ + L+ + +L   +   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 405 YRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 190/341 (55%), Gaps = 35/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++  ++L  +DQY L +L  +++ ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLIEKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSAA 507
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F    +++     
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEEPSVQLTDMP 784

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E V  S+    + K+  F           +E+R +V K LE+AR  K+IG SLEA V L+
Sbjct: 785 EGVTVSQADATEAKFDRF-----------MEVRDDVLKALEIARNEKVIGRSLEASVTLY 833

Query: 568 TDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
             +   +L + ++E          ++++FIIS++ V  +      +N   S      G+ 
Sbjct: 834 ATEEVKNLLASIKE---------DVKQLFIISELTVEDA------QNADTSAPEYTSGR- 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              I V +AEG  CER    S  VG+  ++PTL  +  E++
Sbjct: 878 ---IVVQKAEGELCERSRIISKDVGANPKYPTLSLKNAEIV 915


>gi|338813358|ref|ZP_08625487.1| isoleucyl-tRNA synthetase [Acetonema longum DSM 6540]
 gi|337274717|gb|EGO63225.1| isoleucyl-tRNA synthetase [Acetonema longum DSM 6540]
          Length = 935

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/332 (47%), Positives = 206/332 (62%), Gaps = 37/332 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW NPY+TL P YEA QIEVFG M+ +GYIY+G K V+W PS  TALAEAE+
Sbjct: 146 FQRLGVSGDWENPYVTLKPAYEAEQIEVFGTMAKKGYIYKGLKSVYWCPSCETALAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL--AVWTTTPWTVPANAAVAVNAK 121
           EY E   S +IY  F +     +  G L   L D  +   +WTTTPWT+PAN A+AV+ +
Sbjct: 206 EYAEKK-SHAIYVKFPL----ENDRGKLPAALKDKKVFAVIWTTTPWTMPANVAIAVHPE 260

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVI 179
           L+Y+ VE+                         ++V+++ AS LV ++     W T  V+
Sbjct: 261 LEYSWVEV------------------------NQEVYLL-ASGLVDSVAKTNHWETYTVL 295

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +T  GS LE   + HP  NR   +VI GD++T E GTG VHTAPGHGQED+    KYGL
Sbjct: 296 -ETQTGSQLEGMEFSHPFINR-LSLVILGDHVTLEQGTGCVHTAPGHGQEDFEVGRKYGL 353

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI++PVD  GKFT E GKF GL V  D NV V+K L E+  L+ +   +H+Y + WR K 
Sbjct: 354 PIINPVDPSGKFTAEGGKFQGLSV-EDANVPVIKELAEKGMLLGKGSVKHQYAHCWRCKN 412

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I+RATEQWFASV GFR+ A++AI  V+W+P
Sbjct: 413 PIIYRATEQWFASVAGFREQALEAIKNVQWIP 444



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/350 (36%), Positives = 186/350 (53%), Gaps = 46/350 (13%)

Query: 332 PQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PQE    YGAD+LRLWV+S DY  D+ I   +L+QM+++YRK+R T RY+LGNL+D+   
Sbjct: 617 PQEVIKQYGADILRLWVASADYKADIRISNDILKQMAEVYRKIRNTFRYILGNLYDFDPD 676

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y  L  +D++AL +LE + + + ++Y+ Y+F ++F  +  F  +DLS+ Y D+ K
Sbjct: 677 RHQVEYSRLTELDRWALLRLEQVRQKVTKAYDEYEFHQLFHAVHNFCTIDLSSIYLDILK 736

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY     S  RR+ QT +   L+++V +++P+L   AE+VWQ +P    L D      
Sbjct: 737 DRLYASLPDSLERRAAQTAMYEILVNLVAMLSPVLTFTAEEVWQYMPKTKDLPDSVQLAQ 796

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
             E+K   LD +           W  +LE+R E+ K LE AR  K+IG SL+A V +F D
Sbjct: 797 WPEAKPQYLDSQLEA-------KWSHVLEMRNEITKSLENARRNKVIGHSLDAHVDIFAD 849

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
               A  L+ +  AK     +  I I+S V                    L EG DK   
Sbjct: 850 GREYAG-LKAIGDAK-----IASILIVSSVT-------------------LQEGVDKAPA 884

Query: 630 GVSRAE------------GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              +AE            G KCERCW YS  VG    HP+LC+RC  V+A
Sbjct: 885 DAYKAEEMALAVAVAAAKGDKCERCWIYSDSVGHDSHHPSLCARCAGVVA 934


>gi|431751288|ref|ZP_19539979.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
 gi|430615728|gb|ELB52671.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
          Length = 932

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D+   +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DIAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G  K+ + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWEKVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|421873605|ref|ZP_16305217.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
 gi|372457392|emb|CCF14766.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
          Length = 928

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/329 (47%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEAAQI VFG M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 142 FKRLGIRGDWENPYVTLLPEYEAAQIRVFGAMATKGYIYKGLRCVYWSPSSETALADAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G L++   D G+ +WTTTPWT+PAN A+++N  L+
Sbjct: 202 EYHDKR-SASIYVRFMVKDG----KGKLDQ---DTGVIIWTTTPWTLPANKAISLNPDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV           A  NK                +VAS LV ++  + G + V   +T
Sbjct: 254 YSVV----------LADGNK---------------YLVASGLVESVTKEIGWEQVETVQT 288

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+DLE     HP  +R  P+++ GD++T ++GTG VHTAPGHG++D+  S KY + +L
Sbjct: 289 FKGTDLEGIETQHPFYDRISPIIL-GDHVTLDAGTGCVHTAPGHGEDDFNVSKKYNIEVL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T+EA  F GL    D N  V + L E  +L+      H YP+DWRTKKP I
Sbjct: 348 CPVDHEGKMTQEAPGFEGL-FYEDANKVVSEKLKENGALLKLSFITHSYPHDWRTKKPII 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFR   ++AI +VKW P
Sbjct: 407 FRATEQWFASVEGFRSQMLEAIKEVKWTP 435



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 25/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWVSSVDY  D  I   +L Q +++YRK+R T R+LLGNL  +  
Sbjct: 606 VPKEVTDKLGADILRLWVSSVDYQSDHRISDAILAQNAEVYRKIRNTFRFLLGNLAGFDP 665

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
           + + + YD LP +D++ L +   +VK  R++Y+ YQF  ++Q +  F  ++LS+FY D++
Sbjct: 666 MKDRVEYDRLPELDRFMLAKAAEMVKRTRKAYDEYQFHTVYQTVHNFCTIELSSFYMDIS 725

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RR+ QTV+   LL +V++++PI+PH A++VWQ +P       G    
Sbjct: 726 KDRLYVEAPDSEERRAAQTVMYDILLDLVKLLSPIIPHTADEVWQFIP-------GVTEA 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P ++E+   F   E   W   LE+R EV K +E AR  K+ G+S++A++ L+ 
Sbjct: 779 SVQLTDMPEVNEQ-HLFSEEEQARWTSFLEVRDEVLKAMEEARRNKVFGNSVDARLVLY- 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                    +E+     D + L  +FI++ +E+  +        +   G  +V       
Sbjct: 837 ------PHTQEVYQVLMDMEYLADLFIVADIEMHEAGTEAPAEAVKLEGISVV------- 883

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             V  AEG KCERC      VG+   HPT C RC  ++
Sbjct: 884 --VLAAEGGKCERCRVVKEDVGTVESHPTTCKRCATIV 919


>gi|325288845|ref|YP_004265026.1| isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/391 (39%), Positives = 228/391 (58%), Gaps = 59/391 (15%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  +W+N YLTL  EYEAAQI VFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AEFKRLGVRGNWDNAYLTLHKEYEAAQIGVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E++Y +   S +I+  F +        GLL +   +  + +WTTTPWT+PAN A++V+ +
Sbjct: 198 EIDYADKK-STAIFVKFPV----KEDQGLLGK--DNTSVVIWTTTPWTLPANLAISVHPE 250

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V                  R G       + +++VA +L+  L   W  +L   K
Sbjct: 251 YEYALV------------------RDG-------EEYLVVAKELMEALNKTWNRELTAVK 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G +LE     HP+ +R   V+I G+++T E GTG VHTAPGHG++D++   +YGL +
Sbjct: 286 TVKGKELEGIVCRHPLMSRD-SVLICGEHVTLEQGTGCVHTAPGHGEDDFIVGRQYGLDV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +GKFT+E G++ G+ V    N  ++K L E   LI ++  +H YP+ WR K P 
Sbjct: 345 LCPVDHQGKFTKEGGQYEGMKV-EQANAVILKDLQEAGMLIHQDKIKHSYPHCWRCKNPI 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL---------------RLW 346
           IFRATEQWFAS++GFRQAA++ I +V+W+     P +G D +               R W
Sbjct: 404 IFRATEQWFASIDGFRQAALEEIDRVEWI-----PAWGKDRIYNMIADRGDWCISRQRTW 458

Query: 347 -----VSSVDYTGDVMIGPQVLRQMSDIYRK 372
                +   +  G  +I  Q + ++ +I+R+
Sbjct: 459 GVPIPIFYCEDCGKEIINEQTIEKLQEIFRQ 489



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 181/337 (53%), Gaps = 23/337 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWVSS DY  DV   P+++ QM + YRK+R TLR+LLGNL+D+   
Sbjct: 605 PLQVVRDMGADILRLWVSSADYRNDVAASPRIMNQMVEAYRKIRNTLRFLLGNLYDFNPE 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y  L  ID++ L +L  +++ + ++YE+Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 QDRVEYSKLQEIDRWVLTRLARVIEKVIKAYETYEFHVVYHTVHNFCTVELSAIYLDIVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DR Y  G  S  RRS QTV++  L ++VR++APIL   A+++W  +P A    +    E 
Sbjct: 725 DRAYVEGKESLLRRSAQTVMNEILNALVRLLAPILVFTADEIWAYIPGADPESNVQIEEM 784

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
                 P +  +W    +     W KIL +R ++ K LE AR  KLI  SL AKV ++ D
Sbjct: 785 ------PKIKPEWVNEALAAK--WEKILAIRNDITKALETARQEKLINHSLTAKVDVYVD 836

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
               A       +A      L+ I I+S+  V     + L  N+P  G    E    + I
Sbjct: 837 PEQYA-----FVSA---IPNLEEIVIVSRFIV-----HELKDNVP-EGASASEFFPGLKI 882

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            VS A G KCERCW Y    G+  E+P LC RC  V+
Sbjct: 883 LVSNAPGKKCERCWIYYEDSGTDTEYPDLCPRCAAVV 919


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     GD                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GDDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFDRF-----------MALRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK+ GV  DW+NPY+T+ PEYEA QI+VFG M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 154 FKQIGVRGDWDNPYITMKPEYEAEQIKVFGDMANKGYIYKGLKPVYWSPSSESALAEAEI 213

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++       +G+L E      + +WTTTPWT+PAN A+ V+A L 
Sbjct: 214 EYQDKR-SPSIYVGFKVKEG----NGVLEE---GTQIIIWTTTPWTIPANLAITVHADLS 265

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y V E++           NK                +VA DL+  + +  +W    V+ K
Sbjct: 266 YVVAEVE----------GNK---------------YVVAEDLLEEVTSVLEWNDPTVV-K 299

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE  +  HP+ +R+  V++ GD++TT+SGTG VHTAPGHG++DY+   KYGL I
Sbjct: 300 TVKGSELEQVKAQHPLYDRESLVIL-GDHVTTDSGTGCVHTAPGHGEDDYLVGKKYGLDI 358

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PV+D+G  TEEA  F GL      N  + + L E  +L+  E   H YP+DWRTKKP 
Sbjct: 359 LCPVNDKGVMTEEAPGFEGL-FYDAANKPITEKLQEAGALLKLEFITHSYPHDWRTKKPV 417

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  + A+   KWVP
Sbjct: 418 IFRATPQWFASIDAFREDLLQAVKDTKWVP 447



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 171/283 (60%), Gaps = 24/283 (8%)

Query: 323 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 382
           +IG +  VP +     GAD+LRLWV+SVDY  DV +   +L+Q+S++YRK+R T R+LLG
Sbjct: 612 SIGNIV-VPDKVIKQMGADILRLWVASVDYQADVRLSDAILKQVSEVYRKIRNTYRFLLG 670

Query: 383 NLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
           NL D+    ++ISYD+L  +DQ+ L +L +++K++  +YE+Y+F  I+  +  F  +DLS
Sbjct: 671 NLADFNPEKDAISYDNLREVDQFMLVKLNDLIKSVTTAYENYEFSSIYTSVNNFCTLDLS 730

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 501
           +FY D AKD LY     +F RR+ QTVL   LL++ ++++PIL H A++VW ++      
Sbjct: 731 SFYLDFAKDVLYIEAEDNFERRAMQTVLHESLLALTKLMSPILSHTADEVWSHM------ 784

Query: 502 EDGSAAEFVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSS 559
                 E V  +  P    ++R  P  +  +  W   L+LR  V K LE AR  K+IG S
Sbjct: 785 -SSQQEESVQLTDMP----EYRELPNSKELLSKWEAFLKLRDNVLKALEEARNEKIIGKS 839

Query: 560 LEAKVYLFTDDASLASRLREMC-TAKHDADTLQRIFIISQVEV 601
           L AKV L+ +D +     +E+  + K D   L+++FI+S  E+
Sbjct: 840 LTAKVTLYVNDET-----KELLDSVKED---LKQLFIVSAFEI 874


>gi|332981922|ref|YP_004463363.1| isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699600|gb|AEE96541.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 924

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/385 (39%), Positives = 219/385 (56%), Gaps = 48/385 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW+NPYLTL PE+EA QIEVFG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 140 FKRLGIRGDWDNPYLTLKPEFEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H + S+Y  F +V       G+ N +     L +WTTT WT+PAN AV +N  ++
Sbjct: 200 EYAD-HATESLYVKFPVVDDKGLFDGVDNAY-----LVIWTTTAWTLPANMAVCLNPDIE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKKT 182
           Y +V                         D  +V+++  + L+ ++ A  G     I K 
Sbjct: 254 YGLVRF-----------------------DNGEVYVLAVA-LIDSVAADAGLGHYDILKR 289

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LE  +  HP  +R  PV++ G+Y+T E GTG VH APGHGQED+    KYGL +L
Sbjct: 290 FKGKQLEGIKAKHPFFDRFSPVIL-GEYVTLEQGTGCVHIAPGHGQEDFEVGRKYGLEVL 348

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD+G  T++AGKF+G+    D   A+++ L+    L+  +  +H YP+ WR K P I
Sbjct: 349 NPVDDKGYMTQKAGKFAGM-FYEDAGRAIIEELNANKMLLAVKTVQHSYPHCWRCKNPVI 407

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW-----V 347
           FRATEQWFAS++GFRQ A+DA+  VKW P           +E   +     RLW     +
Sbjct: 408 FRATEQWFASIDGFRQQALDAVASVKWTPAWGQERMSGMIRERYDWCISRQRLWGVPIPI 467

Query: 348 SSVDYTGDVMIGPQVLRQMSDIYRK 372
                 G+ +I  + +  +SD++R+
Sbjct: 468 FYCKDCGEAIINDETVAAVSDLFRQ 492



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 199/335 (59%), Gaps = 23/335 (6%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           V PQ+    YGAD+LRLWV+S DY  D+ I   +L+Q+S++YRK+R T R+L+GNL+D+ 
Sbjct: 607 VDPQDVVQEYGADILRLWVTSADYKNDMRISKSILKQLSEVYRKIRNTARFLMGNLYDFN 666

Query: 389 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              +++ YD+L  ID++AL +L  +++ + E+Y++Y++  +   I  F +VD+SNFY DV
Sbjct: 667 PDTDAMPYDELKEIDRWALMRLHQLIQEVTEAYDNYEYHVVHHAIYGFCVVDMSNFYLDV 726

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLYT    S  RRS QTVL A L ++VR++AP+L   AE++W+ +P +     G+  
Sbjct: 727 LKDRLYTYRADSKERRSAQTVLYAILDAMVRMLAPVLSFTAEEIWRYMPHSA----GNDT 782

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
             V  + WPV D  +    + E   W K++E+R EV K LE AR+ KLIG SLEA V ++
Sbjct: 783 RSVHLASWPVADGSYIDSALMEK--WDKLIEVRDEVLKALETARSQKLIGQSLEAGVDIY 840

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
                   +  +    K +   L  IFI SQ  V     NG       S E +    D +
Sbjct: 841 A-----GGQWYDFL--KSEESHLSEIFITSQAAV----KNGSAPEEAVSAETI----DGL 885

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            I V +A G KCERCW YS  +GS  EHPT+C RC
Sbjct: 886 RIHVHKASGQKCERCWVYSDTIGSDPEHPTICERC 920


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G  K+ + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWEKVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|443632788|ref|ZP_21116967.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
 gi|443347611|gb|ELS61669.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
          Length = 921

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVVAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 IKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        ++K+  F           + +R +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLADMPETIAVPNSEATEDKFDRF-----------MAIRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENQELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFETGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|431031530|ref|ZP_19490704.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|430564940|gb|ELB04115.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
          Length = 932

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G  K+ + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWEKVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|374583006|ref|ZP_09656100.1| isoleucyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
 gi|374419088|gb|EHQ91523.1| isoleucyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
          Length = 925

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 225/389 (57%), Gaps = 59/389 (15%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PYLTL  EYEAAQI VFG M+ +GYIY+G KPV+W PS  TALAEAE+
Sbjct: 140 FKRLGVRGDWDHPYLTLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + +IY  F +       +GL      +  + +WTTTPWT+PAN A++V+ +L 
Sbjct: 200 EYADKPAT-AIYVKFAV------RNGLSVLTEENTFVVIWTTTPWTLPANLAISVHPELT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV  Q                         +   +VA  ++ +L + W  +L +++TL
Sbjct: 253 YAVVSAQ-------------------------QEHWVVAEGMLDSLRSLWQLELPVERTL 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     +P+ +R   +VI G+++T E+GTG VHTAP HG++D++   +YGLP+L 
Sbjct: 288 TGKELEGVLCKNPLMDRDS-MVICGEHVTLEAGTGCVHTAPAHGEDDFLVGKQYGLPVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD  GKFT E G ++GL      N  +V+ L     L++EE  +H YP+ WR K P IF
Sbjct: 347 PVDHRGKFTSEGGAYAGLKT-EKANPVIVEDLKGTGDLVLEETIKHSYPHCWRCKSPIIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL---------------RLW-- 346
           RATEQWFAS++GFRQAA+D I +V+W+     P +G D +               R W  
Sbjct: 406 RATEQWFASIDGFRQAALDEIEKVRWI-----PAWGRDRIFNMIADRGDWCISRQRTWGV 460

Query: 347 ---VSSVDYTGDVMIGPQVLRQMSDIYRK 372
              +   +  G+V++  Q + ++ D +R+
Sbjct: 461 PIPIFYCEDCGNVLVNDQTIAKVQDFFRQ 489



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 189/330 (57%), Gaps = 23/330 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV   P++++QMS+ YRK+R T+R+LL NL+D+    + +SY +
Sbjct: 613 GADILRLWVSSVDYKNDVAASPRIMKQMSEAYRKIRNTMRFLLSNLNDFDPAKDKVSYQE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID++AL +L  +V+ +   YESY+F   +  I  F  ++LS  Y D+AKDRLY  G 
Sbjct: 673 LQEIDRWALLKLSKVVERVLLGYESYEFHWAYHTIHNFCTIELSAVYLDIAKDRLYVEGK 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
           TS  RRS QTVL   L ++VR++APIL  + E++W  +P   T E+   AE       P 
Sbjct: 733 TSLLRRSAQTVLYEVLDALVRLLAPILSFMTEEIWPYIPGEKTTENVQMAEM------PK 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++ +W    +     W +ILELR +V+KVLE AR  KLI   L A+V L+  +       
Sbjct: 787 VNPEWMNEEIA--VLWDQILELRADVSKVLEKARQEKLINHPLTAQVDLYPTEDQFEFLQ 844

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +           L  +FI+S + V     +G     P  G    EG + + I V  A+G 
Sbjct: 845 K--------VPNLAEVFIVSNLTV-----HGPREKRP-EGVQPAEGHEGLGILVLPAKGE 890

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           KCERCW +  +VG   EHPT+C RC  VL+
Sbjct: 891 KCERCWMFHEEVGKDEEHPTICPRCSTVLS 920


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 137 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 196

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 197 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 248

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G  K+ + K 
Sbjct: 249 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWEKVTVLKE 283

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 284 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 342

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 343 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 401

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 402 YRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 773

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 774 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 832 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 915


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 153/330 (46%), Positives = 208/330 (63%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V S KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVSKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKTMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/329 (45%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        L +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERLIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+          A   N+                +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVI----------AVGENR---------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 IKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 195/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        ++K+  F           +  R +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETITVPNSEATEDKFDRF-----------MAFRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENQELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|418033310|ref|ZP_12671787.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SC-8]
 gi|351469458|gb|EHA29634.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SC-8]
          Length = 923

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 142 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 202 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 254 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 288

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 289 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 348 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 407 FRATAQWFASIKDFRSDLLDAIKETKWVP 435



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 589 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 647

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 648 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 707

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 708 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 767

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 768 LWSHLTFVEEQSVQLTDMPETITVPNSEATEEKFDRF-----------MALRDDVLKALE 816

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 817 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTI--SEE 865

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 866 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 917


>gi|449094236|ref|YP_007426727.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
 gi|449028151|gb|AGE63390.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
          Length = 923

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 142 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 202 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 254 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 288

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 289 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 348 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 407 FRATAQWFASIKDFRSDLLDAIKETKWVP 435



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 197/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 589 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 647

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 648 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 707

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 708 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 767

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 768 LWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFDRF-----------MALRDDVLKALE 816

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 817 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTI--SEE 865

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N    + P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 866 N----DAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 917


>gi|428279138|ref|YP_005560873.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 197/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFDRF-----------MALRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S  E++ S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVS--ELIISEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N    + P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----DAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|419823955|ref|ZP_14347488.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|388471992|gb|EIM08782.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
          Length = 920

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 151/329 (45%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F    A     G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAF----AVKDGKGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     GD                       + AS LV  + +  G  +  + KT
Sbjct: 252 YSVISVG----GDR---------------------FVAASALVENVASACGFEQYEVLKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +LEN    HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 LKGKELENIVAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + L+E+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLEEKGALMNLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRTDLLDAIKETKWVP 433



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 199/359 (55%), Gaps = 35/359 (9%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKANAVAVEDLREVDQYILVKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  V+LS+FY D AKD +Y        RRS QTV    LL++ ++ APILPH  ++
Sbjct: 706 SIHNFCTVELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALAKLTAPILPHTTDE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E V       ++EK+  F           +ELR +V K LE
Sbjct: 766 LWAHLTFVEEQSVQLTDMPEAVAIPNGEAVEEKFDHF-----------MELRNDVLKALE 814

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTA-KHDADTLQRIFIISQVEVLPSTPN 607
            AR  K+IG S+EA + L+ + AS     +E+ +A K D   ++++FI+S++ +      
Sbjct: 815 TARNEKIIGKSMEASLTLYPNKAS-----QELLSAIKED---VKQLFIVSELTISE---- 862

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              +  P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 863 ---QEAPADAQSFDSGK----IVVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 914


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|402775788|ref|YP_006629732.1| isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
 gi|452914523|ref|ZP_21963150.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
 gi|239938843|sp|Q45477.3|SYI_BACSU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|402480971|gb|AFQ57480.1| Isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
 gi|407958950|dbj|BAM52190.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|407964527|dbj|BAM57766.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7003]
 gi|452116943|gb|EME07338.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
          Length = 921

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETITVPNSEATEEKFDRF-----------MALRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D    +WTTTPWT+PAN  +AVN +LQ
Sbjct: 200 EYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VVE                        D+ K   +VA++L+ T+  E +W     + +
Sbjct: 252 YSVVEA-----------------------DEAK--YVVATELIETVAKEIEWADYKTL-R 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP+  R   VV+ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 286 TVKGSELERVVAEHPIYKRDSLVVL-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +G  T EA  F GL      N  +   L+E+ +L+      H YP+DWRTKKPT
Sbjct: 345 LCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPT 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  + A+ + KWVP
Sbjct: 404 IFRATAQWFASIKDFREDLLKAVEKTKWVP 433



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 203/362 (56%), Gaps = 41/362 (11%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSLGNVV-IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+ 
Sbjct: 646 KIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +D+S+FY D AKD LY     +  RRS QTVL   LLS+ ++++PIL H A++
Sbjct: 706 AVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADE 765

Query: 491 VWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW ++P     +  L D    + +  +   V  EKW  F           +ELR EV K 
Sbjct: 766 VWVHIPNVTEESVQLVDMPEVQEIEGADQLV--EKWDAF-----------MELRDEVLKA 812

Query: 547 LEVARTGKLIGSSLEAKVYLF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS 604
           LE AR  K+IG SLEAK+ L+   D   L + + E          + ++FI+S +EV   
Sbjct: 813 LEQARNEKVIGKSLEAKLTLYPTADTKELLASISE---------NVGQLFIVSDLEVAEG 863

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
                 +   Y+            I VS+AEG KCERCW  S  VG   +HPTLC+RC +
Sbjct: 864 EAPAEAQKFSYAS-----------IVVSKAEGEKCERCWVVSPTVGEDQDHPTLCTRCAD 912

Query: 665 VL 666
           V+
Sbjct: 913 VV 914


>gi|398304129|ref|ZP_10507715.1| isoleucyl-tRNA ligase [Bacillus vallismortis DV1-F-3]
          Length = 921

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 151/331 (45%), Positives = 205/331 (61%), Gaps = 40/331 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SIY  F +        G+L     D G  + +WTTTPWT+PAN  ++V+  
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVL-----DSGERIIIWTTTPWTIPANLGISVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
           L+Y+V+ +     G+                       +VAS LV  + +  G  +  + 
Sbjct: 250 LEYSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVT 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL 
Sbjct: 285 RTIKGKDLENIVAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD +G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKP
Sbjct: 344 VLCPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 403 TIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +      + ++K+  F           L  R +V K LE
Sbjct: 766 LWAHLAFVEEQSVQLTDMPETIAVPNSEMTEDKFDRF-----------LTFRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENQELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 204/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D    +WTTTPWT+PAN  +AVN +LQ
Sbjct: 200 EYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VVE       D A                     +VA++L+ T+  E +W     ++ 
Sbjct: 252 YSVVE------ADGAK-------------------YVVATELIETVAKEIEWADYKTLR- 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP+  R   VV+G D++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 286 TVKGSELERVVAEHPIYKRDSLVVLG-DHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +G  T EA  F GL      N  +   L+E+ +L+      H YP+DWRTKKPT
Sbjct: 345 LCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPT 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  + A+ + KWVP
Sbjct: 404 IFRATAQWFASIKDFREDLLKAVEKTKWVP 433



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 203/362 (56%), Gaps = 41/362 (11%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSLGNVV-IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+ 
Sbjct: 646 KIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +D+S+FY D AKD LY     +  RRS QTVL   LLS+ ++++PIL H A++
Sbjct: 706 AVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADE 765

Query: 491 VWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW ++P     +  L D    + +  +   V  EKW  F           +ELR EV K 
Sbjct: 766 VWVHIPNVTEESVQLVDMPEVQEIEGADQLV--EKWDAF-----------MELRDEVLKA 812

Query: 547 LEVARTGKLIGSSLEAKVYLF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS 604
           LE AR  K+IG SLEAK+ L+   D   L + + E          + ++FI+S +EV   
Sbjct: 813 LEQARNEKVIGKSLEAKLTLYPTADTKELLASISE---------NVGQLFIVSDLEVAEG 863

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
                 +   Y+            I VS+AEG KCERCW  S  VG   +HPTLC+RC +
Sbjct: 864 EAPAEAQKFSYAS-----------IVVSKAEGEKCERCWVVSPTVGEDQDHPTLCTRCAD 912

Query: 665 VL 666
           V+
Sbjct: 913 VV 914


>gi|402574190|ref|YP_006623533.1| isoleucyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
 gi|402255387|gb|AFQ45662.1| Isoleucyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
          Length = 928

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/328 (45%), Positives = 203/328 (61%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW NPYLTL  EYEAAQI VFG M+ +GYIY+G KPV+W PS  TALAEAE+
Sbjct: 140 FRRLGVRGDWENPYLTLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + +IY  F +        GL      +  + +WTTTPWT+PAN A++V+ + +
Sbjct: 200 EYADKPAT-AIYVKFAV------RDGLSVLTEDNTFVVIWTTTPWTLPANQAISVHPEFK 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV+            AN++               +VA  ++ +L + W  +L + K L
Sbjct: 253 YAVVK------------ANQEH-------------WVVAEGMLESLRSLWKLELPVVKIL 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
           +G +LE     +P+ NR   +VI G+++T E+GTG VHTAP HG++D+  S KY L +L 
Sbjct: 288 SGKELEGVICKNPLMNRDS-LVICGEHVTLEAGTGCVHTAPAHGEDDFYVSKKYDLTVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +GKFT E G ++GL   G  N  +V+ L     L++EE  EH YP+ WR K P IF
Sbjct: 347 PVDHQGKFTSEGGAYAGLKT-GKANPVIVEDLKNSGDLVLEEIIEHSYPHCWRCKSPIIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS+ GFRQAA+D I +V+W+P
Sbjct: 406 RATEQWFASINGFRQAALDEIEKVRWIP 433



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/334 (38%), Positives = 188/334 (56%), Gaps = 31/334 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV   P++++QMS+ YRK+R TLR+LL NL+D+    + ++Y D
Sbjct: 613 GADILRLWVSSVDYKNDVAASPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPAKDKVAYKD 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID++AL +L  +V+ +   YESY+F   +  I  F  ++LS  Y D+ KDRLY  G 
Sbjct: 673 LQEIDRWALLKLSKVVERVLLGYESYEFHWTYHTIHNFCTIELSAVYLDIVKDRLYVEGK 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
           TS  RRS QTVL   L ++VR++ PIL  + E++W  +P   +  +   AE       P 
Sbjct: 733 TSLLRRSAQTVLYEVLDALVRLLTPILSFMTEEIWPYIPGEKSAANVQIAEM------PK 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++ +W    +     W +IL LRT+V+K+LE+AR  KLI   L A+V L+  +    S L
Sbjct: 787 VNSEWMDEELAN--RWDQILALRTDVSKILEIARQDKLISHPLTAQVDLYPTEEQYKS-L 843

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPY----SGEYLVEGKDKVWIGVSR 633
           +++         L  IFI+SQ          L+ ++P      G    E    + I V  
Sbjct: 844 KQV-------PNLAEIFIVSQ----------LVMHLPDEERPEGVQAAEVNKGLGIHVQP 886

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           A G KCERCW +  +VG   E PT+C RC  V++
Sbjct: 887 AGGRKCERCWMFHEEVGKNEEFPTICPRCRNVIS 920


>gi|431741881|ref|ZP_19530781.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
 gi|430601034|gb|ELB38656.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
          Length = 932

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + I K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTILKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 185/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y + +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMIVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LCSRC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCSRCAKIV 917


>gi|402555981|ref|YP_006597252.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
 gi|401797191|gb|AFQ11050.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
          Length = 921

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   VV+ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVVL-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 195/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|430833719|ref|ZP_19451730.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
 gi|430486124|gb|ELA62992.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
          Length = 932

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +VKWV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVKWVIP 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|310778463|ref|YP_003966796.1| isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/334 (44%), Positives = 203/334 (60%), Gaps = 38/334 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F R GV  DW+NPYLTL+PEYEA Q+EVF ++   GYI++G KP++WSP++ TALAEA
Sbjct: 140 SDFIRLGVMGDWDNPYLTLNPEYEAKQLEVFKELYENGYIFKGLKPIYWSPATETALAEA 199

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTTTPWTVPANAAVAVNA 120
           E+EY + HVS SIY          + S LL +  L +  L +WTTTPWT+PAN A+ +NA
Sbjct: 200 EIEY-KNHVSPSIYVKME------ANSDLLEKLGLDEASLVIWTTTPWTIPANVAICLNA 252

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
           + +Y V                 K+  GN         +I+A  L     A  G + V +
Sbjct: 253 EFEYGVY----------------KTEKGN---------LILAKGLSEKAFADMGIENVEL 287

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   G  LE   Y HP  +R   VVI G+++T E+GTG VHTAPGHGQ+DYV   +YGL
Sbjct: 288 LKEFTGDKLERTTYKHPFLDR-TGVVILGEHVTMEAGTGCVHTAPGHGQDDYVVGTRYGL 346

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++++G  TEEAGKF+G+      N  +  ++DE   L+M +  EH YP+DWR+K 
Sbjct: 347 PVISPINNKGHLTEEAGKFAGM-FYKKANKEIAAHMDETGHLLMLKEIEHSYPHDWRSKT 405

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF   EG   R+ A+ AI  V ++P
Sbjct: 406 PVIFRATEQWFVRAEGSDLREKALKAIEDVDFIP 439



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 205/333 (61%), Gaps = 25/333 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  + + +SYD
Sbjct: 620 YGADILRLWCASVDYREDVKISENILKQMAEAYRRVRNTARYILGNTNDFDPIKDRVSYD 679

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +LP ID++A+ +LE + + + E+Y  Y+F+ +F  I  F  +D+S FY D+ KDRLY   
Sbjct: 680 ELPEIDRWAMHKLETLKRKVTENYNKYEFYNLFHDIHYFAGIDMSAFYLDIIKDRLYAEN 739

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L+S+ ++IAPIL   AE++W  +P     E    AE +  SKW 
Sbjct: 740 GDSVDRRAAQTVMYEVLVSMNKMIAPILSFTAEEIWSKIP-----ETSKDAESILISKWY 794

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLFTDDASLA 574
             ++++    +     W +I+++R + NK LE AR G  ++IG+SL+AKV +  +D  LA
Sbjct: 795 ENNDQYIDEELAAK--WDQIIKIRKDANKSLEKARQGENRIIGNSLDAKVLIKLNDEGLA 852

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L E      + + ++ + I+S +E++  T           GE  VEG   +++ V  A
Sbjct: 853 KLLEE------NRELIEGVLIVSSLEIVSETDETFT-----EGEE-VEG---MFVKVLHA 897

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           EG KCERCW YST++G+  EHPT+C RC EVL+
Sbjct: 898 EGEKCERCWKYSTEIGTLEEHPTICPRCSEVLS 930


>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 921

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 207/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  + V+  L+
Sbjct: 200 EYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTTTPWTLPANLGICVHPNLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+++ +                            +VAS+LV  +    G  +  + KT
Sbjct: 252 YSVLQVGAER-------------------------YVVASELVEQVAKTLGFEEYEVVKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +L+N    HP+  R   V++ GD++TT++GTG VHTAPGHG++D++ S+KYGL +L
Sbjct: 287 LKGKELDNVVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  TEEA  F GL    D N A+ + L+ + +L   +   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 405 YRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 188/341 (55%), Gaps = 35/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFEPA 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VHAVPVEELREVDQYILIKLNKLIDKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSAA 507
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F    +++     
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEEPSVQLTDMP 784

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E V  S+    + K+  F           +E+R +V K LE+AR  K+IG SLEA V L+
Sbjct: 785 EGVAVSQAEATEAKFDRF-----------MEVRDDVLKALEIARNEKVIGRSLEASVTLY 833

Query: 568 TDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
             +   +L + ++E          ++++FIIS++ V         +N   S      G+ 
Sbjct: 834 ATEEVKNLLASIKE---------DVKQLFIISELTVEDE------QNADTSAPEYTSGR- 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              I V +AEG  CER    S  VG+  ++PTL  +  E++
Sbjct: 878 ---ILVQKAEGELCERSRIISKDVGANPKYPTLSLKNAEIV 915


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++A+ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQAEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|373857243|ref|ZP_09599985.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
 gi|372452893|gb|EHP26362.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
          Length = 921

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 206/332 (62%), Gaps = 38/332 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV ADW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 137 SQFKRLGVRADWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN  ++V+  
Sbjct: 197 EIEYQDKR-SASIYVAFNVKDG----KGVLD---ADTKIVIWTTTPWTIPANLGISVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP--TLEAKWGTKLVI 179
           L Y VVE                         +K +  +VA  L+   T E  W    V+
Sbjct: 249 LTYVVVE-------------------------EKGLKYLVAEALLEAVTTEIGWENPTVV 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           KK + G++LEN   +HP+  R+  V++ G+++TT++GTG VHTAPGHG++D++   KYGL
Sbjct: 284 KK-VKGNELENIIALHPLYGRESLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L+PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKK
Sbjct: 342 DVLNPVDDKGHMTHEAPGFEGL-FYEKANKPITEKLEEAGALLKLSFITHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 401 PVIFRATAQWFASIKDFRSELLEAVKETKWVP 432



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/360 (36%), Positives = 204/360 (56%), Gaps = 35/360 (9%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSIGNVV-IPAKVMDQLGADILRLWVASVDYQADVRVSDAILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +++ ++ L  +DQ+ L +L  ++K +R SYE+Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPETDAVPFEKLREVDQFMLVKLNKVIKTVRHSYENYEFATIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +DLS+FY D AKD LY     +  RRS QTVL   LL++V+++APIL H A++
Sbjct: 705 AVNNFCTLDLSSFYLDFAKDVLYIEANNNLERRSIQTVLHESLLTLVKLVAPILSHTADE 764

Query: 491 VWQNLPFAY--TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           VW  +P     +++     E+V       L++KW  F           ++LR +V K LE
Sbjct: 765 VWAYIPSEKEESVQLTDLPEYVELPNANELEDKWSLF-----------MKLRDDVLKALE 813

Query: 549 VARTGKLIGSSLEAKVYLFTDDA--SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SL AK+ L+ +++  +L   + E          L ++FI+S  EV     
Sbjct: 814 EARNEKVIGKSLTAKITLYVNESTRTLLDTIEE---------NLTQLFIVSGFEVA---- 860

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G     P +   L    +   I VS+AEG  C+RCW  +T+VG   EHPTLC RC  V+
Sbjct: 861 -GTYEQAPENAIKL----EHAAIVVSKAEGEICDRCWTVTTEVGQDSEHPTLCLRCASVV 915


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 37/360 (10%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---VLD--EKWRTFPVGEIYFWGKILELRTEVNKV 546
           W  +P       G   E V  +  P    LD  E  +T        W   + LR +V K 
Sbjct: 766 WPYIP-------GVTEESVQLTDMPEAVQLDDAEALKT-------KWDAXMTLRDDVLKA 811

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
           LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++     
Sbjct: 812 LEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL----- 859

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 860 GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 141 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 201 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 253 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 287 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 346 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 404

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 405 IFRATAQWFASIEAFRKELLEAVAETKWVP 434



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 589 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 647

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 648 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 707

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 708 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 767

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 768 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 805

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 806 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKTMLESI------NEDLKQLFIVSE 858

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 859 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 909

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 910 CERCATVV 917


>gi|424763057|ref|ZP_18190536.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
 gi|431763889|ref|ZP_19552437.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
 gi|402423524|gb|EJV55737.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
 gi|430621713|gb|ELB58465.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
          Length = 932

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|350265856|ref|YP_004877163.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           TU-B-10]
 gi|349598743|gb|AEP86531.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           TU-B-10]
          Length = 921

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 IKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 195/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        ++K+  F           +  R +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETITVPNSEATEDKFDRF-----------MAFRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENQELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|386737718|ref|YP_006210899.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
 gi|384387570|gb|AFH85231.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
          Length = 913

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|421639651|ref|ZP_16080242.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|403393316|gb|EJY90561.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
          Length = 921

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 198/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+       + ++ M  + +  + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-----TAEMKAMLESIN--EDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          ++  + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----ERTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|421507437|ref|ZP_15954357.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
 gi|81583658|sp|Q81WE4.1|SYI1_BACAN RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|254782360|sp|C3P665.1|SYI_BACAA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782361|sp|C3L730.1|SYI_BACAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|401822571|gb|EJT21721.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
          Length = 921

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|430840728|ref|ZP_19458651.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
 gi|431066289|ref|ZP_19493912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
 gi|431099333|ref|ZP_19496499.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
 gi|431594954|ref|ZP_19522060.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
 gi|431738280|ref|ZP_19527225.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|430494934|gb|ELA71152.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
 gi|430568328|gb|ELB07376.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
 gi|430570834|gb|ELB09773.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
 gi|430590880|gb|ELB28926.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
 gi|430597718|gb|ELB35501.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
          Length = 932

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 184/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LCSRC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCSRCAKIV 917


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|423550356|ref|ZP_17526683.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
 gi|81395073|sp|Q6HER9.1|SYI1_BACHK RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|401189972|gb|EJQ97022.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
          Length = 921

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|425056575|ref|ZP_18460026.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
 gi|403031605|gb|EJY43205.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
          Length = 932

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 251 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 182/338 (53%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S+ P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSELPGYEEFANQEELMDT--WAAFMDFRDKVLKSLEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 137 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 196

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 197 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 248

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 249 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 283

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 284 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 342

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 343 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 401

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 402 YRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 773

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 774 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 832 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 915


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 137 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 196

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 197 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 248

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 249 YVLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 283

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 284 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 342

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 343 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 401

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 402 YRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 773

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 774 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 832 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 915


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|376267792|ref|YP_005120504.1| isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
 gi|254782364|sp|C1EPQ9.1|SYI_BACC3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|364513592|gb|AEW56991.1| Isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
          Length = 921

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKTMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 914

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 208/328 (63%), Gaps = 31/328 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPVHW P   TALAEAE+
Sbjct: 143 FKRLGVRGDWDNPYVTLKPEFEARQIEVFGEMANKGYIYKGLKPVHWCPQCETALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E H S SIY  F +  A    +   N     +   +WTTTPWT+PAN A++++    
Sbjct: 203 EYAE-HKSPSIYVRFNVTDAKGKIADPEN-----VWFVIWTTTPWTIPANLAISLHPDFT 256

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  V +++   GD             +L ++      +  D++ T E   G ++V K   
Sbjct: 257 Y--VRVRTPKHGDL------------ILAEE------LFGDVMETFEIT-GYEVVAK--Y 293

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP+ +R+  VV+ G+++T E+GTG VHTAPGHGQEDY   L+YGL I +
Sbjct: 294 KGKELEGIVCKHPLYDRES-VVVLGEHVTLEAGTGCVHTAPGHGQEDYEVGLRYGLDIFA 352

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           P+D  G+FT+EAG F+GL    +GN  V + L+E+ +L+     +H YP+ WR K+P +F
Sbjct: 353 PMDHAGRFTQEAGPFAGLH-YNEGNKRVSQALEEEGALLSLSFLKHPYPHCWRCKEPVLF 411

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFASVEGFR+ A++AI  VKW+P
Sbjct: 412 RATEQWFASVEGFRKQALEAIKDVKWIP 439



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 203/372 (54%), Gaps = 37/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P     T  W    EG + +   ++G V   P      YGAD+LRLWVSS D+  D
Sbjct: 579 RDRAPYKSTLTHGWVVDGEGKKMSK--SLGNVV-APEHIIKQYGADILRLWVSSTDFRSD 635

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V +   +L+Q++++YRK+R T+RY+LGN HD+    +++SYD L  +D+YAL +L+ +V+
Sbjct: 636 VRVSQDILKQLAEVYRKIRNTIRYMLGNCHDFNPQAHALSYDALDELDRYALHRLQVLVE 695

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
            +  +Y+ ++F  +F  I  F ++++SNFY DV KDRLYT    S  RRS QTV+   L+
Sbjct: 696 RVSGAYDDFEFHVVFHAIHNFCVIEMSNFYMDVLKDRLYTSPAASPGRRSAQTVMHEILV 755

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
           ++ ++IAP+L   +E+VW  LP       G   E V  S WP    +++   +     W 
Sbjct: 756 TLTKLIAPVLTFTSEEVWGYLP-------GEKEESVQLSNWPQSRPEYKDEELAN--RWQ 806

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
           K+L+ R  V + LE AR  KLIG+SL A + L+ D+ + A+    +   K   D L  IF
Sbjct: 807 KLLDYRDVVTRRLEEARKEKLIGASLSAALDLYPDEEAFAA----LAPFK---DRLPEIF 859

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+S   +   T N              +G D   + VS A G KCERCW     VG   E
Sbjct: 860 IVSACTLHEPTGN--------------KGLD---VKVSTAAGEKCERCWMIHPGVGDSAE 902

Query: 655 HPTLCSRCYEVL 666
           HPTLC RC  VL
Sbjct: 903 HPTLCPRCSGVL 914


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4.1|SYI1_BACC1 RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 195/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|385837521|ref|YP_005875151.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
 gi|358748749|gb|AEU39728.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
          Length = 901

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 207/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV +            N+K               ++AS+++  +  K  W    V+
Sbjct: 249 YDYSVVAVN-----------NRK--------------FVIASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 170/330 (51%), Gaps = 39/330 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     NG + + P +     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANGTVSDAPEAAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGS 651
              D + + V  A G  C+RC      VG+
Sbjct: 875 ---DDLAVLVEHAAGDVCDRCRRTDETVGA 901


>gi|397905184|ref|ZP_10506055.1| Isoleucyl-tRNA synthetase [Caloramator australicus RC3]
 gi|397161833|emb|CCJ33389.1| Isoleucyl-tRNA synthetase [Caloramator australicus RC3]
          Length = 931

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 200/332 (60%), Gaps = 34/332 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPYLTL PE+EA QIE+FG M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVIGDWENPYLTLSPEFEAKQIEIFGDMAQKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLGLAVWTTTPWTVPANAAVAVN 119
           +EY +   S SIY  FR++       GL  +    L ++   +WTTT WT+PAN A+ + 
Sbjct: 199 IEY-DDETSNSIYVKFRLL----DDKGLFKDLGVNLNNIYYVIWTTTTWTLPANLAICLG 253

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
               Y +                         K  ++V+I+    L    +A       I
Sbjct: 254 PDFDYVLA------------------------KFNEEVYIVAKELLENVKKAAKLEGEEI 289

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G +LE     HP  +R+  +++ G+++T ESGTG VHTAPGHG+ED+    KYGL
Sbjct: 290 LATFKGYELEGQVCHHPFFDRESLIIV-GEHVTLESGTGCVHTAPGHGEEDFYIGQKYGL 348

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L+PVD +G+FTE AGK++GL    +GN A+++ L E   L+ EE   H YP+ WR K 
Sbjct: 349 EVLNPVDGKGRFTELAGKYAGL-TYKEGNKAILQDLRESNMLLAEEKITHSYPHCWRCKN 407

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFAS+EGFR++A++AI +VKW+P
Sbjct: 408 PIIFRATEQWFASIEGFRKSAIEAIKEVKWIP 439



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 208/330 (63%), Gaps = 20/330 (6%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGADVLRLWVSS DY  DV +   +L+Q+S++YRK+R T R+LLGNL+D+    + + Y+
Sbjct: 618 YGADVLRLWVSSADYKSDVRMSKDILKQLSEVYRKIRNTARFLLGNLYDFNPDTDMVDYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  +D++AL +L++++K++ ++YE+Y+F  ++  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 678 EMNELDKWALLKLQHLIKDVTDAYENYEFHILYHDIHNFCVVDMSNFYLDIIKDRLYTER 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   L ++V++IAP+L   A+++W+ +P +      +  E V  + WP
Sbjct: 738 PDSKERRAAQTVLWTILDALVKMIAPVLSFTADEIWKYMPKS----KNNNFESVHLADWP 793

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            + EK+    +     W  +  +R EV K LE+AR  K+IG SL AKV +F +  +  + 
Sbjct: 794 EVVEKYVDKELEN--RWDNVQRIRGEVLKALEMARVNKIIGHSLNAKVQIFAEGETY-NF 850

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L E+       + L+ +FI+S+VE++    N    N  Y GE + E    + + VS+A+G
Sbjct: 851 LNEI------RNYLETVFIVSKVELIEGI-NKAPEN-AYKGEEIKE----LAVLVSQADG 898

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCW YS  VG   EHPTLC+RC EV+
Sbjct: 899 EKCERCWVYSETVGRSKEHPTLCARCLEVV 928


>gi|389573336|ref|ZP_10163411.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
 gi|388427033|gb|EIL84843.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 207/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  + V+  L+
Sbjct: 200 EYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTTTPWTLPANLGICVHPNLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+++ +                            ++AS+LV  +    G  +  + KT
Sbjct: 252 YSVLQVGAER-------------------------YVIASELVEQVAKTLGFEEYEVVKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +L+     HP+ +R   V++ GD++TT++GTG VHTAPGHG++D++ S+KYGL +L
Sbjct: 287 LKGKELDKVVAAHPIYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVSMKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  TEEA  F GL    D N A+ + L+ + +L   +   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKLDFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 405 YRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 188/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLIDKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F    +  L D  
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEEPSVQLTDMP 784

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +++              E+ F  + +E+R +V K LE+AR  K+IG SLEA V 
Sbjct: 785 EGVAVPQAE------------ATEVKF-DRFMEVRDDVLKALEIARNEKVIGRSLEASVT 831

Query: 566 LFTDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+  +   +L + ++E          ++++FIIS++ V         ++   S      G
Sbjct: 832 LYATEEVKNLLASIKE---------DVKQLFIISELTVEDE------KHADASAPEYTSG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +    I V +AEG  CER    S  VG+  ++PTL  +  E++
Sbjct: 877 R----IVVQKAEGELCERSRIISKDVGANPKYPTLSLKNAEIV 915


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|431758416|ref|ZP_19547043.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
 gi|430617474|gb|ELB54347.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
          Length = 932

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+L+E   D    +WTTTPWT+PAN  +AVN K  
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTTPWTLPANQGIAVNPKFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +VE                        D +K   +VA DL+ T++ + G   + + K 
Sbjct: 251 YLLVE-----------------------ADGRK--FVVAKDLLETVQTEIGWENVTVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L ++
Sbjct: 286 FAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLSVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 404 YRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 183/338 (54%), Gaps = 26/338 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L             
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEA 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R +V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WAAFMDFRDKVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                  ++REM  A  DAD  Q + I+S     P     +  ++      +V   D V 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVS-----PDYFEVMEADVQVPDNAVV--FDDVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 880 ITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1.1|SYI1_BACCZ RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 195/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|423574498|ref|ZP_17550617.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
 gi|401212023|gb|EJR18769.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|386758265|ref|YP_006231481.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
 gi|384931547|gb|AFI28225.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +G  T EA  F G+    D N A+ + LDE+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 195/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ ++L  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEELREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFDRF-----------MALRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +     
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTISEE-- 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +  P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 ----QEAPNDAQSFPTGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2.1|SYI_BACC0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|384181710|ref|YP_005567472.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 194/364 (53%), Gaps = 45/364 (12%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---------VLDEKWRTFPVGEIYFWGKILELRTE 542
           W  +P       G   E V  +  P          L  KW  F           + LR +
Sbjct: 766 WPYIP-------GVTEESVQLTDMPEATQLDGAEALKTKWDAF-----------MTLRDD 807

Query: 543 VNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVL 602
           V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++ 
Sbjct: 808 VLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL- 859

Query: 603 PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                G++   P          +   + V +A G  CERCW  S  +G   EH TLC RC
Sbjct: 860 ----GGMMEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERC 911

Query: 663 YEVL 666
             V+
Sbjct: 912 ATVV 915


>gi|414074888|ref|YP_007000105.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           UC509.9]
 gi|413974808|gb|AFW92272.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           UC509.9]
          Length = 932

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 207/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV +            N+K               ++AS+++  +  K  W    V+
Sbjct: 249 YDYSVVAVN-----------NRK--------------FVIASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 174/347 (50%), Gaps = 41/347 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     NG + + P +     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANGTVSDAPEAAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEH--PTLCSRCYEVL 666
              D + + V  A G  C+RC      VG         LC  C  ++
Sbjct: 875 ---DDLAVLVEHAAGDVCDRCRRTDETVGHNANENLKMLCEHCAHIV 918


>gi|116512741|ref|YP_811648.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108395|gb|ABJ73535.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 932

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 207/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV +            N+K               ++AS+++  +  K  W    V+
Sbjct: 249 YDYSVVAVN-----------NRK--------------FVIASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 174/347 (50%), Gaps = 41/347 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     NG + + P +     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANGTVSDAPEAAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEH--PTLCSRCYEVL 666
              D + + V  A G  C+RC      VG         LC  C  ++
Sbjct: 875 ---DDLAVLVEHAAGDVCDRCRRTDETVGHNANENLKMLCEHCAHIV 918


>gi|384045142|ref|YP_005493159.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
 gi|345442833|gb|AEN87850.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
          Length = 921

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 204/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D    +WTTTPWT+PAN  +AVN +LQ
Sbjct: 200 EYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTTTPWTMPANQGIAVNPELQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VVE       D A                     +VA++L+ T+  E +W     ++ 
Sbjct: 252 YSVVE------ADGAK-------------------YVVATELIETVAKEIEWADYKTLR- 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP+  R   VV+G D++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 286 TVKGSELERVVAEHPIYKRDSLVVLG-DHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +G  T EA  F GL      N  +   L+E+ +L+      H YP+DWRTKKPT
Sbjct: 345 LCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLKLSFITHSYPHDWRTKKPT 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  + A+ + +WVP
Sbjct: 404 IFRATAQWFASIKDFREDLLKAVEKTEWVP 433



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/361 (36%), Positives = 201/361 (55%), Gaps = 39/361 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSLGNVV-IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+ 
Sbjct: 646 KIRNTFRFLLGNLADFNPTTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +D+S+FY D AKD LY     +  RRS QTVL   LLS+ ++++PIL H A++
Sbjct: 706 AVHNFCTIDMSSFYLDFAKDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADE 765

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLD---EKWRTFPVGEIYFWGKILELRTEVNKVL 547
           VW ++P   T E     +     +    D   EKW  F           +ELR EV K L
Sbjct: 766 VWVHIP-NVTEESAQLVDMPEVQEIEGADQLVEKWDAF-----------MELRDEVLKAL 813

Query: 548 EVARTGKLIGSSLEAKVYLF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
           E AR  K+IG SLEAK+ L+   D   L + + E          + ++FI+S +EV    
Sbjct: 814 EQARNEKVIGKSLEAKLTLYPTADTKELLASISE---------NVGQLFIVSDLEVAEGE 864

Query: 606 PNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
                +   Y+            I VS+AEG KCERCW  S  VG   +HPTLC+RC +V
Sbjct: 865 APAEAQKFSYAS-----------IVVSKAEGEKCERCWVVSPTVGEDQDHPTLCTRCADV 913

Query: 666 L 666
           +
Sbjct: 914 V 914


>gi|425058745|ref|ZP_18462121.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
 gi|403037600|gb|EJY48865.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
          Length = 932

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 135 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 194

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 195 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 246

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 247 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 281

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 282 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 340

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 341 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 399

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 400 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 431



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 773

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 774 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 832 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 876 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 915


>gi|430755974|ref|YP_007209754.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|430020494|gb|AGA21100.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
           str. BSP1]
          Length = 921

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+ +     G+                       +VAS LV  + +  G  +  + +T
Sbjct: 252 YSVIAV-----GEDR--------------------FVVASALVENVASACGFDQYEVTRT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T EA  F G+    D N A+ + L+E+ +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLEEKGALVKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 196/360 (54%), Gaps = 36/360 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W +L F    +++     E +        +EK+  F           + LR +V K LE
Sbjct: 766 LWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFDRF-----------MALRDDVLKALE 814

Query: 549 VARTGKLIGSSLEA--KVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
            AR  K+IG SLEA  K+Y   ++  L + ++E          L ++FI+S++ +  S  
Sbjct: 815 TARNEKIIGKSLEANLKLYPNKENKELLASIKE---------NLSQLFIVSELTI--SEE 863

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           N      P   +    GK    I V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 864 N----EAPNDAQSFATGK----IAVEKAEGEMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 195/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 WQNLPFAY--TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 806

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 807 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 854

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 855 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 907


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|383328095|ref|YP_005353979.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
 gi|389867985|ref|YP_006375408.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
 gi|415898391|ref|ZP_11551276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
 gi|416130926|ref|ZP_11597589.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
 gi|424789437|ref|ZP_18216091.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
 gi|424809968|ref|ZP_18235336.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
 gi|424826044|ref|ZP_18250985.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
 gi|424859459|ref|ZP_18283467.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
 gi|424901151|ref|ZP_18324688.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
 gi|424951730|ref|ZP_18366798.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
 gi|424955096|ref|ZP_18369956.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
 gi|424958664|ref|ZP_18373300.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
 gi|424959603|ref|ZP_18374181.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
 gi|424964060|ref|ZP_18378201.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
 gi|424969219|ref|ZP_18382802.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
 gi|424973333|ref|ZP_18386621.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
 gi|424982084|ref|ZP_18394767.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
 gi|424985813|ref|ZP_18398273.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
 gi|424988376|ref|ZP_18400698.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
 gi|424990631|ref|ZP_18402837.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
 gi|424998818|ref|ZP_18410481.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
 gi|425002665|ref|ZP_18414085.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
 gi|425004809|ref|ZP_18416094.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
 gi|425009765|ref|ZP_18420759.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
 gi|425014538|ref|ZP_18425212.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
 gi|425019154|ref|ZP_18429540.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
 gi|425019563|ref|ZP_18429911.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
 gi|425023878|ref|ZP_18433973.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
 gi|425031126|ref|ZP_18436269.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
 gi|425039757|ref|ZP_18444261.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
 gi|425061062|ref|ZP_18464327.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
 gi|427395404|ref|ZP_18888326.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
 gi|430821332|ref|ZP_19439943.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
 gi|430824071|ref|ZP_19442638.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
 gi|430829503|ref|ZP_19447596.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
 gi|430831542|ref|ZP_19449593.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
 gi|430837029|ref|ZP_19455005.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
 gi|430839107|ref|ZP_19457049.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
 gi|430844771|ref|ZP_19462668.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
 gi|430846893|ref|ZP_19464747.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
 gi|430851039|ref|ZP_19468795.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
 gi|430853477|ref|ZP_19471205.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
 gi|430856780|ref|ZP_19474464.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
 gi|430859682|ref|ZP_19477291.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
 gi|430862434|ref|ZP_19479751.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
 gi|430867384|ref|ZP_19482378.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
 gi|430869878|ref|ZP_19483033.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
 gi|430963170|ref|ZP_19487462.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
 gi|431011088|ref|ZP_19489832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
 gi|431185992|ref|ZP_19500055.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
 gi|431237081|ref|ZP_19503224.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
 gi|431264016|ref|ZP_19505904.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
 gi|431290542|ref|ZP_19506677.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
 gi|431382760|ref|ZP_19511353.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
 gi|431446026|ref|ZP_19513708.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
 gi|431523810|ref|ZP_19516835.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
 gi|431677804|ref|ZP_19524402.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
 gi|431743243|ref|ZP_19532123.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
 gi|431745481|ref|ZP_19534325.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
 gi|431747871|ref|ZP_19536635.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
 gi|431754102|ref|ZP_19542767.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
 gi|431760587|ref|ZP_19549184.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
 gi|431770080|ref|ZP_19558483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
 gi|431774392|ref|ZP_19562700.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
 gi|431777053|ref|ZP_19565310.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
 gi|431779319|ref|ZP_19567514.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
 gi|431781360|ref|ZP_19569508.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
 gi|431784991|ref|ZP_19573026.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
 gi|447913350|ref|YP_007394762.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|364090059|gb|EHM32690.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
 gi|364093801|gb|EHM36037.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
 gi|378937789|gb|AFC62861.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
 gi|388533234|gb|AFK58426.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
 gi|402918201|gb|EJX38915.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
 gi|402922117|gb|EJX42522.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
 gi|402924713|gb|EJX44905.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
 gi|402926491|gb|EJX46527.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
 gi|402928951|gb|EJX48757.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
 gi|402931320|gb|EJX50906.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
 gi|402934983|gb|EJX54276.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
 gi|402939561|gb|EJX58466.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
 gi|402947474|gb|EJX65682.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
 gi|402949175|gb|EJX67256.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
 gi|402950117|gb|EJX68132.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
 gi|402958969|gb|EJX76250.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
 gi|402961840|gb|EJX78835.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
 gi|402965064|gb|EJX81802.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
 gi|402972075|gb|EJX88300.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
 gi|402979119|gb|EJX94806.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
 gi|402981855|gb|EJX97362.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
 gi|402982848|gb|EJX98285.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
 gi|402988454|gb|EJY03461.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
 gi|402998605|gb|EJY12854.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
 gi|402999199|gb|EJY13401.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
 gi|403002019|gb|EJY16032.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
 gi|403008486|gb|EJY21990.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
 gi|403011114|gb|EJY24443.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
 gi|403014743|gb|EJY27713.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
 gi|403016295|gb|EJY29119.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
 gi|403041999|gb|EJY52975.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
 gi|425723904|gb|EKU86790.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
 gi|430438595|gb|ELA49012.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
 gi|430441455|gb|ELA51552.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
 gi|430480942|gb|ELA58113.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
 gi|430481425|gb|ELA58581.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
 gi|430487810|gb|ELA64518.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
 gi|430491104|gb|ELA67586.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
 gi|430496202|gb|ELA72307.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
 gi|430534796|gb|ELA75231.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
 gi|430538447|gb|ELA78739.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
 gi|430540558|gb|ELA80760.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
 gi|430543219|gb|ELA83294.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
 gi|430543893|gb|ELA83945.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
 gi|430549012|gb|ELA88859.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
 gi|430550395|gb|ELA90191.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
 gi|430555595|gb|ELA95132.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
 gi|430559255|gb|ELA98614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
 gi|430560110|gb|ELA99416.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
 gi|430572645|gb|ELB11495.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
 gi|430572977|gb|ELB11812.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
 gi|430576452|gb|ELB15103.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
 gi|430581131|gb|ELB19578.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
 gi|430582642|gb|ELB21064.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
 gi|430584768|gb|ELB23082.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
 gi|430585670|gb|ELB23942.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
 gi|430599297|gb|ELB37008.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
 gi|430607077|gb|ELB44405.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
 gi|430610237|gb|ELB47389.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
 gi|430614747|gb|ELB51718.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
 gi|430620025|gb|ELB56828.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
 gi|430623672|gb|ELB60350.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
 gi|430634141|gb|ELB70276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
 gi|430635833|gb|ELB71912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
 gi|430639994|gb|ELB75848.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
 gi|430642174|gb|ELB77955.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
 gi|430648547|gb|ELB83953.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
 gi|430649721|gb|ELB85089.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
 gi|445189059|gb|AGE30701.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
          Length = 932

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVTKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 195/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|406580476|ref|ZP_11055669.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
 gi|406582689|ref|ZP_11057787.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
 gi|406584968|ref|ZP_11059964.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
 gi|406590351|ref|ZP_11064720.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
 gi|410937028|ref|ZP_11368890.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
 gi|404453853|gb|EKA00885.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
 gi|404457679|gb|EKA04209.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
 gi|404463187|gb|EKA08883.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
 gi|404469420|gb|EKA14226.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
 gi|410734621|gb|EKQ76540.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
          Length = 932

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQ--VEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|430826929|ref|ZP_19445097.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
 gi|431765943|ref|ZP_19554442.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
 gi|430444475|gb|ELA54313.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
 gi|430627386|gb|ELB63888.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
          Length = 932

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|431768788|ref|ZP_19557221.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
 gi|430628656|gb|ELB65090.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
          Length = 932

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|423406680|ref|ZP_17383829.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
 gi|401659970|gb|EJS77453.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
          Length = 921

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++            N+K               I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN-----------NEK--------------YIIASELFETVAKTLEWENTEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 195/364 (53%), Gaps = 45/364 (12%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---------VLDEKWRTFPVGEIYFWGKILELRTE 542
           W  +P       G   E V  +  P          L  KW  F           + LR +
Sbjct: 766 WPYIP-------GVTEESVQLTDMPEAAEIDGAEALKTKWDAF-----------MTLRDD 807

Query: 543 VNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVL 602
           V K LEVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++ 
Sbjct: 808 VLKALEVARNEKVIGKSLNASITLYP-TVEMKAMLESI------SEDLKQLFIVSEYKL- 859

Query: 603 PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                G++   P          +   + V++A G  CERCW  S  +G   EH TLC RC
Sbjct: 860 ----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERC 911

Query: 663 YEVL 666
             V+
Sbjct: 912 ATVV 915


>gi|424994832|ref|ZP_18406751.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
 gi|402978930|gb|EJX94631.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
          Length = 937

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|420145233|ref|ZP_14652705.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
           coryniformis subsp. coryniformis CECT 5711]
 gi|398403139|gb|EJN56408.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
           coryniformis subsp. coryniformis CECT 5711]
          Length = 930

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 199/329 (60%), Gaps = 33/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYRG KP+HWSPSS +ALAEAEL
Sbjct: 139 FKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYRGNKPIHWSPSSESALAEAEL 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y             G+L+    D    VWTTTPWT+PA+  + V A+  
Sbjct: 199 EYKDIESPSAYYG-----EQVKDGKGILD---TDTYFVVWTTTPWTIPASEGIVVEAEYD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA +  +             +VAS+L+ TL  K G + V + KT
Sbjct: 251 YSVVQ-----------PAGEDRK------------FVVASELINTLAEKAGWQDVKVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G D+E     HP    +  +V+ GDY+T +SGTGLVHTAPG G +D+    KYGL IL
Sbjct: 288 LKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHTAPGLGDDDFKVGKKYGLDIL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD+G+ T+EA  F GL    D N   +K +++   ++ +EPY H YP DWRTKKP I
Sbjct: 348 SPVDDQGRLTDEAPSFEGL-FYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPVI 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FR+T QWFASV+ FR   + AI +V + P
Sbjct: 407 FRSTPQWFASVDAFRDQILAAIEKVSFTP 435



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 174/329 (52%), Gaps = 28/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA++LRLWV++VD + DV +  +  +Q+SD YRK+R TLR+LL N  D+    +++ Y +
Sbjct: 615 GAEILRLWVATVDSSADVRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSE 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L  +      +Y  Y F  +++ I  FI VDLS FY D AKD +Y    
Sbjct: 675 LQSVDKYLMIRLNQVKAASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAA 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RR+ QTV+   L+ + +++ PILPH  E+VW    F +  ED     +V  ++ PV
Sbjct: 735 DDPKRRAMQTVMYNVLVDLTKLLTPILPHTTEEVWG---FLHEPED-----YVQLAEMPV 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +D       + E+  W   ++LR++V K LE AR  K+IG SLEAKV L+ ++      +
Sbjct: 787 VDHFADEAELQEL--WTNFMDLRSDVLKALEEARDAKVIGKSLEAKVTLYPNET-----V 839

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           R +  A  DA+ +Q I I+S +EV  +           S          V + V  A G 
Sbjct: 840 RTLLNAL-DANVMQ-ILIVSDLEVADAA----------SAPADAADFGDVKVVVEHAAGE 887

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T VG   + P  C RC +++
Sbjct: 888 VCPRCRMTRTDVGVDPKLPAFCGRCAKIV 916


>gi|423395804|ref|ZP_17373005.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
 gi|401653546|gb|EJS71090.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
          Length = 921

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 207/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++            N+K               I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN-----------NEK--------------YIIASELFETVAKTLEWENTEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 196/364 (53%), Gaps = 45/364 (12%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++ G N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPGENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---------VLDEKWRTFPVGEIYFWGKILELRTE 542
           W  +P       G   E V  +  P          L  KW  F           + LR +
Sbjct: 766 WPYIP-------GVTEESVQLTDMPEAAEIDGAEALKTKWDAF-----------MTLRDD 807

Query: 543 VNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVL 602
           V K LEVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++ 
Sbjct: 808 VLKALEVARNEKVIGKSLNASITLYP-TVEMKAMLESI------SEDLKQLFIVSEYKL- 859

Query: 603 PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                G++   P          +   + V++A G  CERCW  S  +G   EH TLC RC
Sbjct: 860 ----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERC 911

Query: 663 YEVL 666
             V+
Sbjct: 912 ATVV 915


>gi|431536451|ref|ZP_19517411.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
 gi|430594938|gb|ELB32890.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
          Length = 932

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 205/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP+D +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPIDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|423457920|ref|ZP_17434717.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
 gi|401148304|gb|EJQ55797.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
          Length = 921

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              N+P A  L DG+ A          L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTNMPEAVQL-DGAEA----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TVEMKTMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|423478034|ref|ZP_17454749.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
 gi|402428196|gb|EJV60293.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
          Length = 921

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              N+P A  L DG+ A          L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTNMPEAVQL-DGAEA----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TVEMKTMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  NR   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYNRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V +A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|423401262|ref|ZP_17378435.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
 gi|401654252|gb|EJS71795.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
          Length = 921

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVD----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              N+P A  L DG+ A          L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTNMPEAVQL-DGAEA----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TVEMKTMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 208/329 (63%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYITLTPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN  +AV+ +LQ
Sbjct: 200 EYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTTTPWTIPANLGIAVHPQLQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VVE          A   K                +VAS+L+ +++ + G   + + KT
Sbjct: 252 YSVVE----------ADGGK---------------YVVASELLQSVQKEIGWEHVTVLKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGSELEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD+ G  TEEA  FSG+    D N A+ + L E  +L+      H YP+DWRTK+PTI
Sbjct: 346 CPVDERGYMTEEAPGFSGM-FYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++  R+  + A+ + KWVP
Sbjct: 405 FRATAQWFASIDKIREQLLKAVEETKWVP 433



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 186/340 (54%), Gaps = 30/340 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 604 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVAEVYRKIRNTFRFMLGNLFDFNP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++ + L  +D+Y L +L  +++ ++++YE+Y+F  I+  +  F  VDLS FYFD +
Sbjct: 664 AEHTVAIEQLREVDRYMLIKLNRLIEKVKQAYETYEFATIYHEVNNFCTVDLSAFYFDFS 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     +  RRS QTVL   L+++ +++APILPH A++VW  +P         + +
Sbjct: 724 KDVLYIEAANNHERRSIQTVLYETLVALTKLVAPILPHTADEVWSYIPHVKE----ESVQ 779

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF- 567
            V   +   +D+  R      +  W   +ELR EV K LEVAR  KLIG SL A V L+ 
Sbjct: 780 LVDMPEAVHIDDAGRI-----VKKWDAFMELRDEVLKALEVARNEKLIGKSLTAHVILYP 834

Query: 568 -TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
             D  +L   + E          ++++ I+S   +      G   + P   +       K
Sbjct: 835 TNDTKALIDSIEE---------DMKQLLIVSAFSI-----GGTFADAPSEAQTFT----K 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V +AEG  C RCW  +  VG   +HP LC RC  ++
Sbjct: 877 TAIVVKQAEGKTCARCWVVTPTVGEDADHPELCPRCATIV 916


>gi|407706354|ref|YP_006829939.1| cytochrome c oxidase subunit III [Bacillus thuringiensis MC28]
 gi|407384039|gb|AFU14540.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis MC28]
          Length = 921

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 158/385 (41%), Positives = 224/385 (58%), Gaps = 52/385 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSVD 351
           IFRAT QWFAS+E FR+  ++A+ + KWVP           ++   +     R W   + 
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHNMVRDRGDWCISRQRAWGVPIP 462

Query: 352 Y----TGDVMIGPQVLRQMSDIYRK 372
                 GD +I  + +  ++D++RK
Sbjct: 463 VFYAENGDPIITDETINHVADLFRK 487



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G   E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GVTEESVQLTNMPEATEVEGSEALKAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A +   L  +      ++ L+++FI+S+ ++      G++ 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSEYKL-----GGMME 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPADAPKY----EHTAVVVSQATGETCERCWVVSETIGKDAEHETLCERCASVV 915


>gi|423464447|ref|ZP_17441215.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
 gi|402420714|gb|EJV52985.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
          Length = 921

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWEKAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ GD++TTE+GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYERDSLVML-GDHVTTEAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G   E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GVTEESVQLTNMPEATEVEGSEALKAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A +   L  +      ++ L+++FI+S+ ++      G++ 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSEYKL-----GGMME 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPADAPKY----EHTAVVVSQATGETCERCWVVSETIGKDAEHETLCERCASVV 915


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++            N+K               I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN-----------NEK--------------YIIASELFETVAKTLEWENTEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 199/360 (55%), Gaps = 37/360 (10%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---VLD--EKWRTFPVGEIYFWGKILELRTEVNKV 546
           W  +P       G   E V  +  P    LD  E+ +T        W   + LR +V K 
Sbjct: 766 WPYVP-------GVTEESVQLTDMPEAVQLDGAEELKT-------KWDAFMTLRDDVLKA 811

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
           LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++     
Sbjct: 812 LEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL----- 859

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 860 GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|333394734|ref|ZP_08476553.1| isoleucyl-tRNA synthetase [Lactobacillus coryniformis subsp.
           coryniformis KCTC 3167]
          Length = 930

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 199/329 (60%), Gaps = 33/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYRG KP+HWSPSS +ALAEAEL
Sbjct: 139 FKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYRGNKPIHWSPSSESALAEAEL 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y             G+L+    D    VWTTTPWT+PA+  + V A+  
Sbjct: 199 EYKDIESPSAYYG-----EQVKDGKGILD---TDTYFVVWTTTPWTIPASEGIVVEAEYD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA +  +             +VAS+L+ TL  K G + V + KT
Sbjct: 251 YSVVQ-----------PAGEDRK------------FVVASELINTLAEKAGWQDVKVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G D+E     HP    +  +V+ GDY+T +SGTGLVHTAPG G +D+    KYGL IL
Sbjct: 288 LKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHTAPGLGDDDFKVGKKYGLDIL 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD+G+ T+EA  F GL    D N   +K +++   ++ +EPY H YP DWRTKKP I
Sbjct: 348 SPVDDQGRLTDEAPGFEGL-FYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPVI 406

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FR+T QWFASV+ FR   + AI +V + P
Sbjct: 407 FRSTPQWFASVDAFRDQILAAIEKVSFTP 435



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 175/329 (53%), Gaps = 28/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA++LRLWV++VD + DV +  +  +Q+SD YRK+R TLR+LL N  D+    +++ Y +
Sbjct: 615 GAEILRLWVATVDSSADVRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSE 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L  +      +Y  Y F  +++ I  FI VDLS FY D AKD +Y    
Sbjct: 675 LQSVDKYLMIRLNQVKAASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAA 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RR+ QTV+   L+ + +++ PILPH  E+VW    F +  ED     +V  ++ PV
Sbjct: 735 DDPKRRAMQTVMYNVLVDLTKLLTPILPHTTEEVWG---FLHEPED-----YVQLAEMPV 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +D       + E+  W   ++LR++V K LE AR  K+IG SLEAKV L+ ++ ++ + L
Sbjct: 787 VDHFADEAELQEL--WTNFMDLRSDVLKALEEARDAKVIGKSLEAKVTLYPNE-TVKTLL 843

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             +     DA+ +Q I I+S +EV  +           S          V + V  A G 
Sbjct: 844 NAL-----DANVMQ-ILIVSDLEVADAA----------SAPADAADFGDVKVVVEHAAGE 887

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T VG   + P  C RC +++
Sbjct: 888 VCPRCRMTRTDVGVDPKLPAFCGRCAKIV 916


>gi|423615841|ref|ZP_17591675.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
 gi|401260378|gb|EJR66551.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
          Length = 921

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TIKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 198/359 (55%), Gaps = 35/359 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVL 547
           W  +P     +  L + S A  V  S+   L  KW  F           + LR +V K L
Sbjct: 766 WPYVPGVTEESVQLTNMSEATEVEGSE--ALKAKWDAF-----------MTLRDDVLKAL 812

Query: 548 EVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN 607
           EVAR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++      
Sbjct: 813 EVARNEKVIGKSLNASITLYP-TVEMKAMLESI------SEDLKQLFIVSEYKL-----G 860

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G++   P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 861 GMMEEAPADAPKY----EHTAVVVSQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 154/332 (46%), Positives = 207/332 (62%), Gaps = 42/332 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL----VPTLEAKWGTKLVI 179
           YA+V++                       D+K    I+AS+L      TLE  W    V+
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFEPVAKTLE--WENAEVV 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL
Sbjct: 284 -KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKK
Sbjct: 342 EVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 401 PIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +       + L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|374997213|ref|YP_004972712.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
 gi|357215579|gb|AET70197.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
          Length = 923

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 203/328 (61%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PY+TL  EYEAAQI VFG M+ +GYIY+G KPV+W PS  TALAEAE+
Sbjct: 140 FKRLGVRGDWDHPYMTLQKEYEAAQIGVFGDMTKKGYIYKGLKPVYWCPSCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +    +S  A++   +     + L  E   +  + +WTTTPWT+PAN A++V+ +L+
Sbjct: 200 EYAD----KSATAIYVKFAVKDGLNVLPQE---NTYIVIWTTTPWTLPANLAISVHPELK 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+V             ANK+               +VA  ++ +L + W   L ++KT 
Sbjct: 253 YALVS------------ANKER-------------WVVAEGMLDSLRSLWKMDLPVEKTF 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE+    +P+ +R    VI G+++T E+GTG VHTAP HG++D+    KYGLP+L 
Sbjct: 288 KGKELEHINCKNPLMDRDSK-VICGEHVTLEAGTGCVHTAPAHGEDDFYVGKKYGLPVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +GKFT E G ++GL      N  +V+ L     L++EE  +H YP+ WR K P IF
Sbjct: 347 PVDHQGKFTSEGGAYAGLKT-AKANPVIVEDLKGSRDLVLEEIIDHSYPHCWRCKSPIIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++GFRQA +  I +V+W+P
Sbjct: 406 RATEQWFASIDGFRQATLTEIEKVRWIP 433



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 186/333 (55%), Gaps = 29/333 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV   P++++QMS+ YRK+R T+R+LL NL+D+    + ++Y +
Sbjct: 613 GADILRLWVSSVDYKNDVAASPRIMKQMSEAYRKIRNTMRFLLSNLNDFEPAKDKVAYPE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID++AL +L  +V+ +   YE+Y+F   +  I  F  ++LS  Y D+ KDRLY  G 
Sbjct: 673 LQEIDRWALLKLSKVVERVLTGYETYEFHWAYHTIHNFCTIELSAVYLDIVKDRLYVEGK 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
           TS  RRS QTVL   L ++VR++APIL  +  ++W  +P   ++++   AE   E K   
Sbjct: 733 TSLLRRSAQTVLYEVLDALVRLLAPILSFMTHEIWPYIPGEKSVDNVQIAEMP-EVKAEW 791

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +DE+  +        W +IL LRT+V KVLE AR  KLI   L A+V LF  +       
Sbjct: 792 MDEELES-------RWDQILALRTDVAKVLEKARQEKLINHPLTAQVDLFPTE------- 837

Query: 578 REMCTAKHDADTLQRIFIISQVEVLP---STPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
            E   A      L  IFI+S + +     S P G+            E    + I V  A
Sbjct: 838 -EQYKALQQVPNLAEIFIVSSLVIHKPDESRPEGV---------ETAEVNKGLGILVQPA 887

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +G KCERCW Y   VG   EHPT+C RC  V++
Sbjct: 888 KGEKCERCWMYHEDVGKDKEHPTICPRCSSVIS 920


>gi|423470109|ref|ZP_17446853.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
 gi|402437361|gb|EJV69385.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
          Length = 921

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V +                       D+K    I+AS+L  T+E   +W    V+ K
Sbjct: 251 YAIVNVN----------------------DEK---YIIASELFETVEKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 197/357 (55%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 IEEAPADAPKY----EHTAVVVAQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|423604477|ref|ZP_17580370.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
 gi|401245097|gb|EJR51455.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
          Length = 921

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++     G+                       I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----GEK---------------------YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|423452801|ref|ZP_17429654.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
 gi|401139360|gb|EJQ46922.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
          Length = 921

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V +                       D+K    I+AS+L  T+E   +W    V+ K
Sbjct: 251 YAIVNVN----------------------DEK---YIIASELFETVEKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYIVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 197/357 (55%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPGKNKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 IEEAPADAPKY----EHTAVVVAQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|375285821|ref|YP_005106260.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
 gi|423353599|ref|ZP_17331226.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
 gi|423374307|ref|ZP_17351645.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
 gi|423567208|ref|ZP_17543455.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
 gi|254782366|sp|B7HLM9.1|SYI_BACC7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782367|sp|B9IVX2.1|SYI_BACCQ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
 gi|358354348|dbj|BAL19520.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
 gi|401089412|gb|EJP97583.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
 gi|401094219|gb|EJQ02301.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
 gi|401214296|gb|EJR21026.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
          Length = 921

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++     G+                       I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----GEK---------------------YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++     G+                       I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----GEK---------------------YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++     G+                       I+AS+L  T+    +W    V+ K
Sbjct: 243 YAIVKVN----GEK---------------------YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 WQNLPFAY--TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 806

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +       + L+++FI+S+ ++      G+
Sbjct: 807 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------NEDLKQLFIVSEYKL-----GGM 854

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V +A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 855 MEEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETLCERCATVV 907


>gi|423385397|ref|ZP_17362653.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
 gi|423528245|ref|ZP_17504690.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
 gi|401635453|gb|EJS53208.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
 gi|402451908|gb|EJV83727.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
          Length = 921

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---FIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|345021941|ref|ZP_08785554.1| isoleucyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
          Length = 918

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/332 (46%), Positives = 205/332 (61%), Gaps = 42/332 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK+ GV ADWNNPY+TL  +YEAAQI VFG+M+ QGYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKQLGVRADWNNPYITLTKDYEAAQIRVFGEMAKQGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SI+  F +        G+L     D G  + +WTTTPWT+PAN  ++V+  
Sbjct: 200 EYYDKR-SASIFVAFEVADG----KGVL-----DTGDKIIIWTTTPWTLPANLGISVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
             Y VV                     NV +D      +VA DL+ ++  E +W T  VI
Sbjct: 250 YNYVVV---------------------NVNQDN----FVVAEDLLESITQELEWDTPQVI 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT  G +L+     HP  +R+  V++ GD++TT++GTGLVHTAPGHG++D+  S KY L
Sbjct: 285 -KTFKGKELDRVTAKHPFYDRESLVML-GDHVTTDAGTGLVHTAPGHGEDDFYVSAKYNL 342

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVD++G FT EA  F GL    D N  + + L E  +L+      H YP+DWRTKK
Sbjct: 343 DVLCPVDEKGVFTSEAPGFEGL-FYDDANKVITEKLQETGALLKLNIITHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PTIFRAT QWFAS++ FR+  ++ I +VKW P
Sbjct: 402 PTIFRATAQWFASIKDFREDILNEIKEVKWYP 433



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 190/358 (53%), Gaps = 37/358 (10%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV I   +L+Q S+ YRK
Sbjct: 588 LDGNGRKMSKSLGNVM-VPSKVQKQLGADILRLWVASVDYQADVRISDDILKQTSEAYRK 646

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LL NL D+    + ++  DL  +D+Y L +L+ +V+++RESYE Y+F  IF  
Sbjct: 647 IRNTFRFLLANLADFNPETDRVAERDLEEVDRYMLHRLQILVQDVRESYEKYEFSPIFHR 706

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F   DLS+FY D AKD LY        RRS QT     L ++V+++ PI+PH A++V
Sbjct: 707 IHNFCADDLSSFYLDFAKDILYIEAADHHRRRSIQTGYYEILTTLVQLLTPIIPHTADEV 766

Query: 492 WQNLPFAYTLEDGSAAEFVFESK---WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           W+ +P    +E     +     K   +  L++KW  F           + +R +V K LE
Sbjct: 767 WEYIP-GVKIESPQLTDIPEPRKIEGFDGLEDKWNHF-----------MAVRDDVLKALE 814

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            AR  K+IG SLEAK+ +   D        E  T  +  + + ++ I+S+  +   +   
Sbjct: 815 DARNEKVIGKSLEAKITVVPKD-------EETKTVLNSIENVHQLLIVSEAVITDQS--- 864

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                    E L + +  V + V +  G KCERCW  S  VG    HPTLCSRC +V+
Sbjct: 865 ---------ESLTKYR-YVDVLVEKHPGEKCERCWVASDTVGENHNHPTLCSRCADVV 912


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2.1|SYI_CARHZ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/330 (46%), Positives = 202/330 (61%), Gaps = 37/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPYLTL P YEA QIE+FG+M+ +GYIY+G KPV+W P   TALAEAE
Sbjct: 139 QFKRLGVRGDWENPYLTLMPHYEAKQIEIFGEMAKKGYIYKGLKPVYWCPVCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S SIY  F++V       G + E   D  L +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 IEYAEKK-SPSIYVRFKVVEG----KGKVPE---DAYLVIWTTTPWTLPANVAIAVHPEF 250

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT-LEAKWGTKLVIKK 181
            YA+V+ +   +GD                       +VA  LV    EA   T  ++ +
Sbjct: 251 TYALVKTE---KGD----------------------YVVAEGLVQQFFEATKLTGEIVAR 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G +L      HP   R+ PVV+  DY+T ESGTGLVHTAPGHG ED+ T  KY LP+
Sbjct: 286 -FKGEELLGVVTRHPFIERESPVVL-ADYVTLESGTGLVHTAPGHGTEDFETGKKYNLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPV+ +G FTE AGK++G+ +  DGN A+ + L+    L+     +H YP+ WR K P 
Sbjct: 344 LSPVNHQGVFTEGAGKYAGMKI-DDGNKAITQDLEASGDLLAMSFIKHSYPHCWRCKNPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFAS++GFR+ A+  I +V+W+P
Sbjct: 403 IFRATEQWFASIDGFREQALKEIEKVEWIP 432



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 181/329 (55%), Gaps = 28/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGNSISYDD 397
           GAD+LRLWV+S DY  D+ I   +L+Q ++ YRK+R T+R+LLGNL+D+    + + Y+ 
Sbjct: 616 GADILRLWVASADYRSDLAISNNILKQTAEGYRKIRNTIRFLLGNLYDYDHEKHRVPYER 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID++AL +L  ++  +  +Y  Y+F  +F  +  F  VD+S  Y D+ KDRLY    
Sbjct: 676 LLEIDRWALAKLHRLIARVVRAYRDYEFHVVFHAVHNFCTVDMSAIYLDIIKDRLYVELP 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTVL   L S++R++ PIL    E+ +++ P     E     +       P 
Sbjct: 736 DSEKRRSAQTVLYEILDSLLRLLTPILAFTTEEAYRHFPAKGKKESVQLLDM------PK 789

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E++    + E   W KILE+R +V K LE+AR  KLIG SL+A V L       +  L
Sbjct: 790 VEERYLDLTLEET--WDKILEVRAKVLKALEIARQEKLIGHSLDAWVTL-----KASGEL 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            +    +   +    IFI+SQV+         I+N   +GE    G+  + + V++A G 
Sbjct: 843 YDFLVER--VNMWPEIFIVSQVD---------IQNEEVTGE---NGELPLEVVVNKALGE 888

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC+RCW YS +VG   E P  C RC  VL
Sbjct: 889 KCQRCWMYSPEVGLDPEFPDTCPRCAGVL 917


>gi|125624825|ref|YP_001033308.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|389855202|ref|YP_006357446.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
 gi|124493633|emb|CAL98620.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071624|gb|ADJ61024.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 932

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 207/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV                         D  + F+I AS+++  +  K  W    V+
Sbjct: 249 YDYSVV------------------------ADNGRKFVI-ASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    GL    +GN  V K+L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGL-FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 175/347 (50%), Gaps = 41/347 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I + +L  +D+Y L +   +VK IR++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIRKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     NG + + P +     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANGTVSDAPEAAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEH--PTLCSRCYEVL 666
              D + + V  A G  C+RC      VG         LC  C  ++
Sbjct: 875 ---DDLAVLVEHAAGDVCDRCRRTDETVGHNANENLKMLCEHCAHIV 918


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + +WVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETQWVP 432



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 196/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVTEESVQLTNMPEAVQLDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TVEMKTMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCDRCATVV 915


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNI-IVPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G   E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GVTEESVQLTNMPEATEVEGSEALKAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A +   L  +      ++ L+++FI+S+ ++      G++ 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSEYKL-----GGMME 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPADAPKY----EHTAVVVSQATGETCERCWVVSETIGKDAEHETLCERCASVV 915


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|434376999|ref|YP_006611643.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|401875556|gb|AFQ27723.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
          Length = 921

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRNSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|83589714|ref|YP_429723.1| isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725741|sp|Q2RK59.1|SYI_MOOTA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|83572628|gb|ABC19180.1| Isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 930

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 209/331 (63%), Gaps = 37/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PYLTL+PEYEA QI +FG+M+ +GYIY+G KPV+W     TALAEAE
Sbjct: 139 EFKRLGVRGDWEHPYLTLEPEYEAIQIGIFGEMAKKGYIYKGLKPVYWCTDCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWTTTPWTVPANAAVAVNAK 121
           +EY E   S SIY  F +  A     GL   F P    + +WTTTPWT+PAN A+A++ +
Sbjct: 199 VEYGEER-SPSIYVKFPVADA----RGL---FEPRGSSIVIWTTTPWTLPANVAIALHPE 250

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV-PTLEAKWGTKLVIK 180
            +Y ++++     G+                      +++A++LV P LE        + 
Sbjct: 251 FKYVLIQV-----GEER--------------------LLMAAELVRPVLELLGVKDYQVV 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  GS+LE     +P+ +R   VVI G+++T E GTG VHTAPGHG EDY   ++Y LP
Sbjct: 286 ATFTGSELEGVVCRNPLMDRDS-VVILGEHVTLEQGTGCVHTAPGHGLEDYEVGMRYHLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSP+DD G+FTEE G+F+GL  + + N AVVK L+ + +L+     +H+YP+ WR K P
Sbjct: 345 VLSPLDDRGRFTEEGGQFAGL-FIDEANKAVVKELEARGALLHFGFIKHQYPHCWRCKHP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFAS+EGFRQ A++AI +VKW+P
Sbjct: 404 IIFRATEQWFASIEGFRQEALEAIKKVKWIP 434



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 27/332 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GADVLRLWV+S DY  DV     ++RQ+++ YRK+R T R+LL NL D+  G + +  ++
Sbjct: 615 GADVLRLWVASADYRRDVAASENIMRQITEAYRKIRNTCRFLLANLADFDPGKDQVPREE 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++A+ +L+ ++  +  +Y+ Y+F  ++  I  F  VDLS  Y D+ KDRLYT   
Sbjct: 675 MLELDRWAMNRLQRLIARVTMAYDDYEFHVVYHTIHNFCAVDLSAVYLDIIKDRLYTWPA 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTVL   +  +VR++ PIL    E++W+ LP     ED         + WP 
Sbjct: 735 ASKGRRSAQTVLYETINVLVRLLTPILAFTTEEIWRYLPG----EDDRPISVQL-AGWPQ 789

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +  ++    + E   W +IL++R  V + LE AR  + +G+SL A V+L+  DA +   L
Sbjct: 790 VKTEFLDDELEEK--WKRILQVRDVVARALERARQEQDLGNSLNAAVHLYP-DADMYQFL 846

Query: 578 REMCTAKHDADTLQRIFIISQVEVL---PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           + +       D L  I I+S+V++       P G +      G         + + V+ A
Sbjct: 847 KPL------GDELATIMIVSRVDLHQPGEEAPAGSLEAPELPG---------LRVYVTGA 891

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G KCERCW  S  VG   +HPTLC RC  V+
Sbjct: 892 PGQKCERCWMVSETVGQDTDHPTLCRRCATVV 923


>gi|402564761|ref|YP_006607485.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
 gi|423359068|ref|ZP_17336571.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
 gi|423561699|ref|ZP_17537975.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
 gi|401084940|gb|EJP93186.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
 gi|401201956|gb|EJR08821.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
 gi|401793413|gb|AFQ19452.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
          Length = 921

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/332 (46%), Positives = 207/332 (62%), Gaps = 42/332 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL----VPTLEAKWGTKLVI 179
           Y++V++                       D+K    I+AS+L    V TLE  W    V+
Sbjct: 243 YSIVKVN----------------------DEK---YIIASELFETVVKTLE--WENAEVV 275

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL
Sbjct: 276 -KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGL 333

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKK
Sbjct: 334 EVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKK 392

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 393 PIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 196/364 (53%), Gaps = 45/364 (12%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP---------VLDEKWRTFPVGEIYFWGKILELRTE 542
           W  +P       G   E V  +  P          L  KW  F           + LR +
Sbjct: 758 WPYVP-------GVTEESVQLTDMPEAAEIDGAEALKTKWDAF-----------MTLRDD 799

Query: 543 VNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVL 602
           V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++ 
Sbjct: 800 VLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL- 851

Query: 603 PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                GL+   P          +   + V++A G  CERCW  S  +G   EH TLC RC
Sbjct: 852 ----GGLMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERC 903

Query: 663 YEVL 666
             V+
Sbjct: 904 ATVV 907


>gi|423522273|ref|ZP_17498746.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
 gi|401176022|gb|EJQ83221.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
          Length = 889

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V +                       D+K    I+AS+L  T+E   +W    V+ K
Sbjct: 251 YAIVNVN----------------------DEK---YIIASELFETVEKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F G+      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGI-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 181/331 (54%), Gaps = 31/331 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+  G N ++  DL  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPGENKVAAADLREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TVEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCE 640
           I   P          +   + V++A G  CE
Sbjct: 863 IEEAPADAPKY----EHTAVVVAQATGDTCE 889


>gi|433446183|ref|ZP_20410242.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
 gi|432000479|gb|ELK21373.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
          Length = 918

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 208/329 (63%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYITLTPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN  +AV+ +LQ
Sbjct: 200 EYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTTTPWTIPANLGIAVHPELQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VVE          A   K                +VAS+L+ +++ + G   + + KT
Sbjct: 252 YSVVE----------ADGGK---------------YVVASELLQSVQKEIGWEHVTVLKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 VKGSELEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD+ G  TEEA  F+G+    D N A+ + L E  +L+      H YP+DWRTK+PTI
Sbjct: 346 CPVDERGYMTEEAPGFAGM-FYDDANKAITEKLQEVGALLKLSFITHSYPHDWRTKQPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++  R+  + A+ + KWVP
Sbjct: 405 FRATAQWFASIDKIREQLLKAVEETKWVP 433



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 187/340 (55%), Gaps = 30/340 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 604 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVAEVYRKIRNTFRFMLGNLFDFNP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++ + L  +D+Y L +L  ++  ++++YE+Y+F  I+  I  F  VDLS FYFD +
Sbjct: 664 AEHTVAIEQLREVDRYMLIKLNRLIDKVKQAYETYEFATIYHEINNFCTVDLSAFYFDFS 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     +  RRS QTVL   L+++ +++APILPH A++VW  +P         + +
Sbjct: 724 KDVLYIEAANNHERRSIQTVLYETLVALTKLVAPILPHTADEVWSYIPHVKE----ESVQ 779

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF- 567
            V   +   +D+  R      +  W   +ELR EV K LEVAR  KLIG SL A V L+ 
Sbjct: 780 LVDMPEAVHIDDADRI-----VAKWDAFMELRDEVLKALEVARNEKLIGKSLTAHVILYP 834

Query: 568 TDDA-SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           TDD  +L   + E          ++++ I+S   +      G   + P   +       K
Sbjct: 835 TDDTKALIDSIEE---------DMKQLLIVSAFSI-----GGTFADAPSEAQTFT----K 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V +AEG  C RCW  +  VG   +HP LC RC  ++
Sbjct: 877 TAIVVKQAEGKTCARCWVVTPTVGEDADHPELCPRCVAIV 916


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|384187956|ref|YP_005573852.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|410676271|ref|YP_006928642.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
 gi|423412301|ref|ZP_17389421.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
 gi|423431914|ref|ZP_17408918.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
 gi|423585695|ref|ZP_17561782.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
 gi|423628990|ref|ZP_17604739.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
 gi|423641026|ref|ZP_17616644.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
 gi|423649757|ref|ZP_17625327.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
 gi|452200337|ref|YP_007480418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
 gi|81433828|sp|Q819R4.1|SYI1_BACCR RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1.1|SYI_BACC4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|401104369|gb|EJQ12346.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
 gi|401116670|gb|EJQ24508.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
 gi|401233041|gb|EJR39537.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
 gi|401268535|gb|EJR74583.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
 gi|401280087|gb|EJR86009.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
 gi|401283037|gb|EJR88934.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
 gi|409175400|gb|AFV19705.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
 gi|452105730|gb|AGG02670.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537525|sp|Q9CEH8.1|SYI_LACLA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 932

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 208/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV +                          + F+I AS+++  +  K  W    V+
Sbjct: 249 YDYSVVAVNG------------------------RKFVI-ASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    GL +  +GN  V K+L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGL-LYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVERVDWVIP 433



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 177/350 (50%), Gaps = 41/350 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     N  + N P S     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANEPVNNAPESAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFV-EH-PTLCSRCYEVLAVQ 669
              D + + V  A G  C+RC      VG    EH   LC  C  ++  +
Sbjct: 875 ---DDLAVLVEHAAGEVCDRCRRTDETVGHNANEHLKMLCEHCAHIVETE 921


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|423378252|ref|ZP_17355536.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
 gi|423441373|ref|ZP_17418279.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
 gi|423448401|ref|ZP_17425280.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
 gi|423533789|ref|ZP_17510207.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
 gi|423540955|ref|ZP_17517346.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
 gi|423547193|ref|ZP_17523551.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
 gi|423623025|ref|ZP_17598803.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|401128995|gb|EJQ36678.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
 gi|401172143|gb|EJQ79364.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
 gi|401178914|gb|EJQ86087.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
 gi|401259798|gb|EJR65972.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
 gi|401636518|gb|EJS54272.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
 gi|402418034|gb|EJV50334.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
 gi|402464008|gb|EJV95708.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWEKAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G   E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GVTEESVQLTNMPEATEVEGSEALKAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A +   L  +      ++ L+++FI+S+ ++      G++ 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSEYKL-----GGMME 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPADAPKY----EHTAVVVSQATGETCERCWVVSETIGKDAEHETLCERCASVV 915


>gi|423656756|ref|ZP_17632055.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
 gi|401290497|gb|EJR96191.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+KK
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVVKK 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 286 -VKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWEKAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G   E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GVTEESVQLTNMPEATEVEGSEALKAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A +   L  +      ++ L+++FI+S+ ++      G++ 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSEYKL-----GGMME 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + VS+A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPADAPKY----EHTAVVVSQATGETCERCWVVSEAIGKDAEHETLCERCASVV 915


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|424971989|ref|ZP_18385386.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
 gi|424977781|ref|ZP_18390766.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
 gi|425036630|ref|ZP_18441372.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
 gi|425043082|ref|ZP_18447351.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
 gi|425048716|ref|ZP_18452607.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|402956928|gb|EJX74351.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
 gi|402964523|gb|EJX81297.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
 gi|403014171|gb|EJY27189.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
 gi|403021321|gb|EJY33788.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
 gi|403030031|gb|EJY41751.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
          Length = 932

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 204/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|347522215|ref|YP_004779786.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
 gi|385833600|ref|YP_005871375.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
 gi|343180783|dbj|BAK59122.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
 gi|343182753|dbj|BAK61091.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
          Length = 928

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 206/332 (62%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW  PY+TL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWERPYMTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+         G L E   D+   +WTTTPWT+PAN  + V+  
Sbjct: 197 EIEYQDVR-SASIFVAFK----AKDVKGRLPE---DVEFVIWTTTPWTLPANMGIFVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIK 180
            +Y+VVE+ S                        + F+I +  L    E  +W    V+ 
Sbjct: 249 YEYSVVEVGS------------------------RKFVIASEMLSKVAETLEWENPTVL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +TL GSD++     HP  +R+  +++ GDY+T +SGTGLVH+APGHG++DY  S KY L 
Sbjct: 284 QTLKGSDMDMMTAHHPFYDRES-LIMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLE 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VLSPVDNRGYYTDEAPGLEGI-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 402 VIFRATPQWFASIDDFRENILSEIEQVDWIIP 433



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 184/345 (53%), Gaps = 43/345 (12%)

Query: 332 PQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ + 
Sbjct: 604 PSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTTDFDKN 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++SY++L  +D+Y L +   +VK +RE+Y+SY F  +++ +  F+  DLS FY D AK
Sbjct: 664 TNAVSYENLRSVDKYMLAKFNTLVKAVREAYDSYNFMSVYKQVVNFLTNDLSAFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     +  RRS QTV+   L  + +++ PILPH AE++W  L       +    EF
Sbjct: 724 DVVYIEAANAADRRSMQTVMYTMLADLTKLLVPILPHTAEEIWSYL-------EAETEEF 776

Query: 510 VFESKWP-VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            + ++ P V D       +GE   W   L+ R +V K LE AR  KLIG SLEAKV ++ 
Sbjct: 777 AYLAEMPEVKDFTGSEELLGE---WEAFLDFRNKVLKALEEAREAKLIGKSLEAKVTVYP 833

Query: 569 DD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-- 624
           ++  +SL   L E          + ++ I+S+  V              S E   E    
Sbjct: 834 NEVVSSLLVSLDE---------NVAQLLIVSEFSV--------------SNEEAPEAALQ 870

Query: 625 -DKVWIGVSRAEGSKCERCWNYSTQVGS-FVEH-PTLCSRCYEVL 666
            D V I V +A G  C+RC      VG+   EH   LCS C  ++
Sbjct: 871 FDDVAILVEQAAGQVCDRCRRTDVTVGTDENEHLHALCSSCATIV 915


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 204/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G KP++WSPSS ++LAEA
Sbjct: 135 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEA 194

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 195 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 246

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 247 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 281

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 282 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 340

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 341 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 399

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 400 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 431



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 773

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 774 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 832 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 876 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 915


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|423426030|ref|ZP_17403061.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
 gi|423437348|ref|ZP_17414329.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
 gi|423503428|ref|ZP_17480020.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
 gi|449090837|ref|YP_007423278.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. HD73]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|401110777|gb|EJQ18676.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
 gi|401120503|gb|EJQ28299.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
 gi|402459649|gb|EJV91386.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
 gi|449024594|gb|AGE79757.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. HD73]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V +A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|423635332|ref|ZP_17610985.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
 gi|401278083|gb|EJR84019.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 195/368 (52%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A +   L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGEICERCWVVSETIGKDTEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5.1|SYI_BACC2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 200/359 (55%), Gaps = 35/359 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVL 547
           W  +P     +  L D   A  +++++   L  KW  F           + LR +V K L
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLYDAE--ALKTKWDAF-----------MTLRDDVLKAL 812

Query: 548 EVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN 607
           EVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      
Sbjct: 813 EVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----G 860

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G++   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 861 GMMEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|433545423|ref|ZP_20501777.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
 gi|432183246|gb|ELK40793.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
          Length = 837

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 206/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 140 FKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  FR+V       G L+    + G+ +WTTTPWT+PAN A++++ +L+
Sbjct: 200 EYKDKR-SPSIYVSFRVVDG----KGKLDT---ETGVVIWTTTPWTIPANLAISLHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+                        D +K   +VA+ L+     + G + V +  +
Sbjct: 252 YSVVK-----------------------ADGRK--FLVANGLIEAASKEIGWENVEVLAS 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R  P+++ G+++T ++GTG VHTAPGHG++D+    KY L +L
Sbjct: 287 FKGQELEGVVTKHPIYDRPSPLIL-GEHVTLDAGTGCVHTAPGHGEDDFAVGQKYNLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T EA  F GL    D N AV + L E  +L+    + H YP+DWRTKKP I
Sbjct: 346 CPVDHEGKMTSEAPGFEGL-FYEDANKAVTEKLKENGALLKLNFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+  ++AI  VKW+P
Sbjct: 405 YRATEQWFASIDGFREQMLEAIKNVKWIP 433



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 152/257 (59%), Gaps = 9/257 (3%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YR
Sbjct: 587 ALDGEGRKMSKSLGNVV-VPQQVIDKLGADILRLWVASVDYQADVRISDAILNQIAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL  +    + ++Y+ L  +D+Y L +   +VK  R++Y+ YQF  +F 
Sbjct: 646 KIRNTFRFLLGNLDGFDPAKDRVAYEQLGELDRYVLAKAAKVVKRSRKAYDEYQFHTVFH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F ++DLS FY D+ KDRLY     S  RR+ QTV+   LLS+V+++APILPH A++
Sbjct: 706 AVHNFCVIDLSAFYLDICKDRLYVEAPDSVKRRAAQTVMYDCLLSLVKLVAPILPHTADE 765

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW  +P       G     V  +  P  DE+  +F       W   L +R EV K +E A
Sbjct: 766 VWSFIP-------GVTEPSVQLTDMPEGDEQHLSFSAEAESKWDAFLAVRDEVLKAMEEA 818

Query: 551 RTGKLIGSSLEAKVYLF 567
           R  K+ G+S++AK+ L+
Sbjct: 819 RRNKVFGNSVDAKLALY 835


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVM-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|423582105|ref|ZP_17558216.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|401212984|gb|EJR19725.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
          Length = 921

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 195/368 (52%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A +   L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKVMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGEICERCWVVSETIGKDTEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|423511930|ref|ZP_17488461.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
 gi|402450191|gb|EJV82025.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
          Length = 921

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELECTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|385831347|ref|YP_005869160.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
 gi|418039117|ref|ZP_12677426.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
           I-1631]
 gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
 gi|354692477|gb|EHE92300.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
           I-1631]
 gi|374673972|dbj|BAL51863.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis IO-1]
          Length = 932

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 207/333 (62%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+       T G L E   D+   +WTTTPWT+P+N  +  +  
Sbjct: 197 EIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWTTTPWTIPSNLGIFAHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y+VV +                          + F+I AS+++  +  K  W    V+
Sbjct: 249 YDYSVVAVNG------------------------RKFVI-ASEMLEAVAEKLEWENPEVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH APGHG++DY  S KY L
Sbjct: 284 -QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+LSP+D+ G +T+EA    GL    +GN  V K+L+E+ +L+  E + H YP+DWRTKK
Sbjct: 342 PVLSPIDNRGYYTDEAPGLEGL-FYDEGNKVVSKWLEEKDALLKLEFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIFRATPQWFASIDDFRQNILDEVERVDWVIP 433



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 177/350 (50%), Gaps = 41/350 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     N  + N P S     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANEPVNNAPESAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFV-EH-PTLCSRCYEVLAVQ 669
              D + + V  A G  C+RC      VG    EH   LC  C  ++  +
Sbjct: 875 ---DDLAVLVEHAAGEVCDRCRRTDETVGHNANEHLKMLCEHCAHIVETE 921


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V +A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMDEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|425007881|ref|ZP_18418996.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
 gi|402994306|gb|EJY08849.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
          Length = 932

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 204/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP Y AAQ+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYGAAQVRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +         +L+E   D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|423558542|ref|ZP_17534844.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
 gi|401191810|gb|EJQ98832.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
          Length = 921

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V +                       D+K    I+AS+L  T+E   +W    V+ K
Sbjct: 251 YAIVNVN----------------------DEK---YIIASELFETVEKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 196/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L  ++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAAAELREVDRYMLVKLNELITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 IEEAPADAPKY----EHTAVVVAQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|365159327|ref|ZP_09355508.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
 gi|363625325|gb|EHL76366.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
          Length = 921

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVM-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 804 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V +A G  CERCW  S  +G   EH TL
Sbjct: 857 YKL-----GGMMDEAPADAPKY----EHTAVVVVQATGETCERCWVVSETIGKDAEHETL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMDEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|423592108|ref|ZP_17568139.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|401232241|gb|EJR38743.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL ++    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDNFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 194/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N++   +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVPVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTDAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|423489072|ref|ZP_17465754.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
 gi|423494797|ref|ZP_17471441.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
 gi|423498411|ref|ZP_17475028.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
 gi|423598793|ref|ZP_17574793.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
 gi|423661265|ref|ZP_17636434.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
 gi|423669470|ref|ZP_17644499.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
 gi|423674351|ref|ZP_17649290.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
 gi|254782368|sp|A9VTD5.1|SYI_BACWK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|401150890|gb|EJQ58342.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
 gi|401160460|gb|EJQ67838.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
 gi|401237063|gb|EJR43520.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
 gi|401298597|gb|EJS04197.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
 gi|401301306|gb|EJS06895.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
 gi|401309902|gb|EJS15235.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
 gi|402432320|gb|EJV64379.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 131 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 190

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 191 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 242

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 243 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 276

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 277 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 335

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 336 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 394

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 395 IFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 579 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 637

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 638 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 697

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 698 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 757

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+D  A           L  KW  F           + 
Sbjct: 758 WPYIPGVTEESVQLTDMPEAVQLDDAEA-----------LKTKWDAF-----------MT 795

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR +V K LEVAR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+
Sbjct: 796 LRDDVLKALEVARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSE 848

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G++   P          +   + V++A G  CERCW  S  +G   EH TL
Sbjct: 849 YKL-----GGMMEEAPADAPKY----EHTAVIVAQATGETCERCWVVSETIGKDAEHETL 899

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 900 CERCATVV 907


>gi|425046435|ref|ZP_18450451.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
 gi|403024298|gb|EJY36468.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
          Length = 932

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 144/332 (43%), Positives = 202/332 (60%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F +           + F  D    +WTTTPWT+PAN  +AVN K
Sbjct: 197 EIEYKDVK-SPSIFVAFNVKDGK-------DIFDEDTAFVIWTTTPWTLPANQGIAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y +VE                        D +K   +VA DL+ T++++ G   + + 
Sbjct: 249 FTYVLVE-----------------------ADGRK--FVVAKDLLETVQSEIGWENVTVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   KY L 
Sbjct: 284 KEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGSKYKLS 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 184/340 (54%), Gaps = 30/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            E
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEEE 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +V  S++P  +E      + +   W   ++ R  V K LE AR  KLIG SLEAK+ ++ 
Sbjct: 776 YVQLSEFPGYEEFANQEELMDT--WTAFMDFRDNVLKALEEARNSKLIGKSLEAKLTVYP 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                  ++REM  A  DAD  Q + I+S    EV+ +        +P +        D 
Sbjct: 834 -----KQQVREMLKA-LDADIAQ-LLIVSPDYFEVMAAD-----EQVPDNAMVF----DD 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A+G  C+RC      VG   + P LC RC +++
Sbjct: 878 VAITVEKADGETCDRCRQVRKDVGVDEKLPHLCGRCAKIV 917


>gi|423518587|ref|ZP_17495068.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
 gi|401160795|gb|EJQ68170.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 194/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+     + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TVEMKAMLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTDAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 141 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 201 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 253 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 287 TVKGSELEYTVAKHPFYDRNSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 346 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 404

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 405 IFRATAQWFASIEAFRKELIEAVAETKWVP 434



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 589 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 647

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 648 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 707

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 708 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 767

Query: 492 WQNLP 496
           W  +P
Sbjct: 768 WPYIP 772


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|423418196|ref|ZP_17395285.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|401106469|gb|EJQ14430.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
          Length = 921

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKATLESI------SEDLKQLFIVSEYKL-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|427392308|ref|ZP_18886313.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
 gi|425731575|gb|EKU94391.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
          Length = 926

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 204/328 (62%), Gaps = 36/328 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV   W++PY+TL  +YEAAQI VF +M+L+GYIYRG KPV+WSPSS +ALAEAE
Sbjct: 138 DFKRLGVLGRWDDPYVTLTKDYEAAQIRVFSEMALKGYIYRGLKPVYWSPSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     SIY  F +        G+L++      + +WTTTPWT+P+N A+AV+ + 
Sbjct: 198 IEYKDVR-GPSIYVSFDVKDG----KGVLDQ---GDKIVIWTTTPWTLPSNLAIAVHPEG 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
           +Y V ++    EG +                      +VA+ L+  +  K G   + + +
Sbjct: 250 EYGVYQV----EGQN---------------------YVVATKLIDEVSEKVGWEDIELVR 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G DLEN   +HP  +R+  +VI GD++T +SGTGLVHTAPGHG +DY+   KY LP+
Sbjct: 285 TIKGEDLENIICLHPYLDRES-LVILGDHVTFDSGTGLVHTAPGHGDDDYIVCQKYDLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+DD+G FT+E  +F GL    D N+     L E  +L+  E   H YP+DWRTKKP 
Sbjct: 344 LSPIDDKGYFTDEVPEFEGL-FYDDANIKSTDLLKENNALLHMEFRTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKW 329
           IFRAT QWFAS++ FRQA +D + +V W
Sbjct: 403 IFRATPQWFASIDKFRQAILDEVEKVDW 430



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 180/357 (50%), Gaps = 34/357 (9%)

Query: 314 EGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           EG++ +   ++G V  + P + A   GAD++RLW  SVD   DV +   +L Q++++YRK
Sbjct: 590 EGYKMSK--SVGNV--IDPNDVANDMGADIIRLWSISVDTEADVRVSHDILNQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T+R+L+ N  D+    N + Y DL  +DQY L Q + +V  +  +Y+ Y +  I++ 
Sbjct: 646 IRNTVRFLIQNTEDFDPKVNEVDYQDLSGLDQYILVQTDRLVDQVLTAYDEYNYLDIYKT 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           + +F  V LSNFY +++KD LY     + +RR+ QTV    LL + +++AP++PH AE++
Sbjct: 706 VNQFCTVTLSNFYMNISKDILYIDPEDAQSRRAVQTVFYKILLVLAKLLAPVIPHTAEEI 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  L            ++V  S  P          + +   W + L +R  V K  EVAR
Sbjct: 766 WSYL--------SEPEDYVQLSDMPKRQNYQNALELEDK--WSQFLSIRDHVLKANEVAR 815

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFII-SQVEVLPSTPNGLI 610
             KLIG   EAK  L+ D A      R++  +    D   R+ +I SQ++VL       +
Sbjct: 816 ENKLIGKDFEAKTTLYLDQAG-----RDLLDS---LDVNVRLVLISSQLDVLD------L 861

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPT-LCSRCYEVL 666
            + P     L    D V + V +  G  C RC   +       E    LC RC++++
Sbjct: 862 ADKPDDDRIL--DFDGVSVLVEKMPGEVCTRCRITTDDPYELPEDKGYLCQRCHDIV 916


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLP 496
           W  +P
Sbjct: 766 WPYIP 770


>gi|423389795|ref|ZP_17367021.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
 gi|401641886|gb|EJS59603.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
          Length = 921

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGIRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 27/355 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W  +P       G+  E V  +  P   E   +  +     W   + LR +V K LEVAR
Sbjct: 766 WPYVP-------GAEEESVQLTNMPEATEVEGSEALRAK--WDAFMTLRDDVLKALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G I 
Sbjct: 817 NEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKI-----GGTIE 864

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 865 EAPTEAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|385778782|ref|YP_005687947.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
 gi|419723201|ref|ZP_14250336.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum AD2]
 gi|419724895|ref|ZP_14251950.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum YS]
 gi|125713530|gb|ABN52022.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
 gi|380771515|gb|EIC05380.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum YS]
 gi|380780968|gb|EIC10631.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum AD2]
          Length = 931

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 196/329 (59%), Gaps = 28/329 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR GV ADW+NPY+TL+ E+EA QIEVFG+M+ +GYIY+G +PV+W P   TALAEAE
Sbjct: 141 AFKRLGVRADWDNPYITLNKEFEAKQIEVFGEMAKKGYIYKGLRPVYWCPECETALAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   + SIY  F +        GL++  L +    +WTTT WT+P N A+ +N + 
Sbjct: 201 IEYAE-DTTLSIYVKFEVKDDKGKFGGLVDS-LKNTYFVIWTTTTWTLPGNLAICLNGEF 258

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y +V                        K   + +II    L   ++     +  +K  
Sbjct: 259 EYGLV------------------------KANGEYYIIALELLENVMKVAGIEEYEVKAK 294

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G++LE     HP  +R   V+I GD++T E+GTG VHTAPGHG ED+    KY +P++
Sbjct: 295 FTGAELEGMLCRHPFLDRD-SVIILGDHVTAEAGTGCVHTAPGHGAEDFEVCKKYDIPVI 353

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD+G  T EAG+F+GL      N A+++ L    +L+  E   H+YP+ WR K P I
Sbjct: 354 VPVDDKGYLTSEAGQFAGL-YYEKSNAAIIEQLKSTNNLLASEKIVHQYPHCWRCKDPII 412

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS+EGFR+ A+DAI  VKW+P
Sbjct: 413 FRATEQWFASIEGFRKEAIDAISTVKWIP 441



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 198/332 (59%), Gaps = 22/332 (6%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DY  D+ I   +L+Q+S++YRK+R T RY+LGN++D+    + +SYD
Sbjct: 620 YGADILRLWVASSDYRTDIRISKDILKQLSEVYRKIRNTCRYILGNIYDFDPNKDMVSYD 679

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  +D++AL +L  ++K + ++YE Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 680 EMNELDKWALMKLNGLIKKVNDAYEKYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSR 739

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QT +   L ++V+++AP+L   +E+VWQ +P   T    +  E V  + WP
Sbjct: 740 ADSKERRSAQTAMYEILEALVKMLAPVLAFTSEEVWQFMPHRST----NDPESVQLNYWP 795

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             +EK+    + E   W +I+E+R  V+K LE+ART K+IG SL AKV +F D  +    
Sbjct: 796 EPNEKYENAALKEK--WDRIIEIRDVVSKALEIARTEKIIGHSLNAKVTIFADKENYDF- 852

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK-VWIGVSRAE 635
              +   K D   L  +FI+S  E+               G+Y  +   K + + +S A 
Sbjct: 853 ---IEPIKKD---LVTVFIVSDFELKGYDEAS-------DGKYYEDPDVKGIRVNISMAS 899

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           GSKCERCW  S  VG   +HPTLC RC EV+ 
Sbjct: 900 GSKCERCWMISESVGKNEKHPTLCDRCAEVVG 931


>gi|33303927|gb|AAP22279.1| isoleucyl-tRNA synthetase [Bacillus cereus]
 gi|33303929|gb|AAP22280.1| isoleucyl-tRNA synthetase [Bacillus cereus]
          Length = 422

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 23  FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 82

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 83  EY-QDKKSASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 134

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 135 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 168

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  NR   V++ GD++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 169 TVKGSELEYTVAKHPFYNRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 227

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 228 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 286

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 287 IFRATAQWFASIEAFRKELIEAVAETKWVP 316


>gi|423483486|ref|ZP_17460176.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
 gi|401141037|gb|EJQ48592.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
          Length = 921

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+V   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFVVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 197/357 (55%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 IEEAPADAPKY----EHTAVVVTQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|33303919|gb|AAP22275.1| isoleucyl-tRNA synthetase [Bacillus cereus]
 gi|33303923|gb|AAP22277.1| isoleucyl-tRNA synthetase [Bacillus cereus]
 gi|33303925|gb|AAP22278.1| isoleucyl-tRNA synthetase [Bacillus cereus]
          Length = 422

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 206/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 23  FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 82

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 83  EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 134

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++     G+                       I+AS+L  T+    +W    V+ K
Sbjct: 135 YAIVKVN----GEK---------------------YIIASELFETVAKTLEWENAEVV-K 168

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 169 TVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGKKYGLEV 227

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  TEEA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 228 LCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 286

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 287 IFRATAQWFASIEAFRKELLEAVAETKWVP 316


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
 gi|189082319|sp|A7GRM0.1|SYI_BACCN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 204/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW++PY+TL+P YEA QI+VFG+M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDHPYITLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ KL+
Sbjct: 199 EYKDKK-SASIYVAFEVKDGKDVLEG-------DEKFIIWTTTPWTLPANLGISVHPKLE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+ASDL  T+    +W    V+ +
Sbjct: 251 YSIVKVN----------------------DEK---YIIASDLFDTVAKTLEWENPEVV-R 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR   + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRSELLQAVKETKWVP 432



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 53/368 (14%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLADFNPAQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 W-------------QNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE 538
           W              ++P A  L+DG A           L  KW  F           + 
Sbjct: 766 WPYIPGVTEESVQLTDMPEAIELQDGEA-----------LKTKWDAF-----------MT 803

Query: 539 LRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ 598
           LR++V K LEVAR  K+IG SL A + LF       + ++EM  +    + L+++FI+S+
Sbjct: 804 LRSDVLKALEVARNEKVIGKSLTASITLFP-----TAEMKEMLESIQ--EDLKQLFIVSE 856

Query: 599 VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL 658
            ++      G I   P   +      +   + V++A G  CERCW  S  VG+  E+ TL
Sbjct: 857 YKL-----GGTIEEAPADAQKY----EHTAVLVTQANGETCERCWVVSETVGNDNEYKTL 907

Query: 659 CSRCYEVL 666
           C RC  V+
Sbjct: 908 CERCATVV 915


>gi|399052166|ref|ZP_10741731.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
 gi|398050032|gb|EJL42422.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
          Length = 928

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 206/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 140 FKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       G L+    + G+ +WTTTPWT+PAN A++++ +L+
Sbjct: 200 EYKDKR-SPSIYVSFQVVDG----KGKLD---TETGVVIWTTTPWTIPANLAISLHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+                        D +K   +VA+ L+     + G + V +  +
Sbjct: 252 YSVVK-----------------------ADGRK--FLVANGLIEAASKEIGWENVEVLAS 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R  P+++ G+++T ++GTG VHTAPGHG++D+    KY L +L
Sbjct: 287 FKGQELEGVVTKHPIYDRPSPLIL-GEHVTLDAGTGCVHTAPGHGEDDFAVGQKYNLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T EA  F GL    D N AV + L E  +L+    + H YP+DWRTKKP I
Sbjct: 346 CPVDHEGKMTSEAPGFEGL-FYEDANKAVTEKLKENGALLKLNFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+  ++AI  VKW+P
Sbjct: 405 YRATEQWFASIDGFREQMLEAIKNVKWIP 433



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 182/338 (53%), Gaps = 24/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKLGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFDP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y+ L  +D+Y L +   +VK  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 AKDRVAYEQLGELDRYVLAKAAKVVKRSRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RR+ QTV+   LLS+V+++APILPH A++VW  +P       G    
Sbjct: 724 KDRLYVEAPDSVKRRAAQTVMYDCLLSLVKLVAPILPHTADEVWSFIP-------GVTEP 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P  DE+  +F       W   L +R EV K +E AR  K+ G+S++AK+ L+ 
Sbjct: 777 SVQLTDMPEGDEQHLSFSAEAESKWDAFLAVRDEVLKAMEEARRNKVFGNSVDAKLALYP 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                A  L  M       D L  +FI++ V++               G         + 
Sbjct: 837 QTEEAAKALAAM-------DDLADLFIVAHVDLHAQGEAAPAEAAQLEG---------IA 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + VS A+G KCERC      VG+   HP++C RC +++
Sbjct: 881 VVVSAADGQKCERCRVVKQDVGAREAHPSICVRCADIV 918


>gi|392531410|ref|ZP_10278547.1| isoleucyl-tRNA ligase [Carnobacterium maltaromaticum ATCC 35586]
          Length = 927

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 204/328 (62%), Gaps = 36/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPY+TL+P+YEAAQI VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGEWDNPYITLNPDYEAAQIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GLL+    D    +WTTTPWT+PAN  + VNA   
Sbjct: 199 EYKDVK-SASIYVAFKVVDG----KGLLDN---DTSFVIWTTTPWTIPANLGITVNADYS 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V+      E D A                     +VA DL+  + ++ G   + +   
Sbjct: 251 YVVI------EADGAK-------------------FVVAKDLLEKVSSEIGWENVTVLNE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L GS+LE     HP+  R   +++ GD++T ++GTGLVHTAPGHG +D++   KY L +L
Sbjct: 286 LKGSELEYMTAQHPLYERTSLLMV-GDHVTLDAGTGLVHTAPGHGDDDFIVGQKYKLNVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FT+EA  F G+     GN  + + L+E+ +L+  + + H YP+DWR+KKP I
Sbjct: 345 SPVDSKGVFTDEAPGFEGV-FYDKGNKLITEALNEKGALLKLDFFTHSYPHDWRSKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWV 330
           FRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 404 FRATPQWFASIQDFRGEILEAVEGVEWV 431



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 178/340 (52%), Gaps = 31/340 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D++ 
Sbjct: 603 LPSKVIKQMGADIIRLWVSSVDAQSDVRVSDEILKQVSEVYRKIRNTMRFLLANTSDFKP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I YDDL  +D+Y L +L  +V  + E+YE+Y F   +Q+I  F  VDLS FY D A
Sbjct: 663 AEHGIKYDDLRSVDKYLLIRLNQLVGAVEENYENYDFSSNYQLINNFCTVDLSQFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     ++ RR+ QTV    L  + +++ PILPH AE++W  L            +
Sbjct: 723 KDVVYIEAENAYERRAMQTVFYDVLEKMTKLLTPILPHTAEEIWNFL--------DEEED 774

Query: 509 FVFESKWPVLDEKWRTFP-VGEIY-FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           +V  ++ P   E    +P  GE+   W   +  R  V K LE AR  K IG S EAK+ L
Sbjct: 775 YVQLAEMPAAIE----YPNQGELLDMWDAFMTFRDHVQKALEEARNEKKIGKSFEAKLVL 830

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  + +     + + TA      L ++ I+S +E+           + +         D 
Sbjct: 831 YPTEQT-----KVLFTALD--SNLAQLLIVSDLEIAGDKAVAPSEALQF---------DD 874

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V I V +A G  CERC      VGS  + PTLC RC  ++
Sbjct: 875 VAIVVEKAHGETCERCRGVKEDVGSHADAPTLCDRCATIV 914


>gi|407977670|ref|ZP_11158507.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
 gi|407415923|gb|EKF37504.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
          Length = 921

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  + V+  L+
Sbjct: 200 EYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTTTPWTLPANLGICVHPNLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+V+++ +                            +VAS+L   +    G     + KT
Sbjct: 252 YSVLQVGTER-------------------------YVVASELAEQVAKTLGFDDYEVVKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +L+     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++  +KYGL +L
Sbjct: 287 LKGKELDTIVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGMKYGLEVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  TEEA  F GL    D N AV + L+ + +L   +   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGVMTEEAPGFEGL-FYEDANKAVTEQLEAKGALKKLDFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 405 YRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 31/339 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLINKVKKAYDDYEFSVVYHAIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSAA 507
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F    +++     
Sbjct: 725 DVVYIEHANHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSFVEEPSVQLTDMP 784

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E V   +    + K+  F           +E+R +V K LE+AR  K+IG SLEA V L+
Sbjct: 785 EGVTVPQAEATETKFDRF-----------MEVRDDVLKALEIARNEKVIGRSLEASVTLY 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D     +L  + + K D   ++++FIIS++ V         +    S      G+   
Sbjct: 834 ATDE--VKQL--LASIKED---VKQLFIISELTVEDE------QLADASAPQYTSGR--- 877

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I V +AEG  CER    S  VG+  ++PTL  +  E++
Sbjct: 878 -IVVQKAEGELCERSRIISKDVGANPKYPTLSLKNAEIV 915


>gi|414083302|ref|YP_006992010.1| isoleucyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
 gi|412996886|emb|CCO10695.1| isoleucyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
          Length = 749

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 204/328 (62%), Gaps = 36/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPY+TL+P+YEAAQI VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGEWDNPYITLNPDYEAAQIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GLL+    D    +WTTTPWT+PAN  + VNA   
Sbjct: 199 EYKDVK-SASIYVAFKVVDG----KGLLDN---DTSFVIWTTTPWTIPANLGITVNADYS 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V+      E D A                     +VA DL+  + ++ G   + +   
Sbjct: 251 YVVI------EADGAK-------------------FVVAKDLLEKVSSEIGWENVTVLNE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L GS+LE     HP+  R   +++ GD++T ++GTGLVHTAPGHG +D++   KY L +L
Sbjct: 286 LKGSELEYMTAQHPLYERTSLLMV-GDHVTLDAGTGLVHTAPGHGDDDFIVGQKYKLNVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G FT+EA  F G+     GN  + + L+E+ +L+  + + H YP+DWR+KKP I
Sbjct: 345 SPVDSKGVFTDEAPGFEGV-FYDKGNKLITEALNEKGALLKLDFFTHSYPHDWRSKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWV 330
           FRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 404 FRATPQWFASIQDFRGEILEAVEGVEWV 431



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D++ 
Sbjct: 603 LPSKVIKQMGADIIRLWVSSVDAQSDVRVSDEILKQVSEVYRKIRNTMRFLLANTSDFKP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I YDDL  +D+Y L +L  +V  + E+YE+Y F   +Q+I  F  VDLS FY D A
Sbjct: 663 AEHGIKYDDLRSVDKYLLIRLNQLVGAVEENYENYDFSSNYQLINNFCTVDLSQFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVL 469
           KD +Y     ++ RR+ QTV 
Sbjct: 723 KDVVYIEAENAYERRAMQTVF 743


>gi|297617013|ref|YP_003702172.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144850|gb|ADI01607.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 926

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 200/329 (60%), Gaps = 35/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW NPYLTL+P +EA QI VFG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 143 FRRLGVRGDWENPYLTLEPRFEAVQIRVFGEMAKKGYIYKGLKPVYWCADCETALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS SIY  F +  A     GL     P+  + +WTTTPWT+PAN  +AV+    
Sbjct: 203 EY-QDKVSPSIYVKFPVKDA----KGLF--VSPNTYVVIWTTTPWTLPANTGIAVHPDYD 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV + +                            +VA  L+  + A+ G     I +T
Sbjct: 256 YVVVRVGAER-------------------------YVVAKGLLEEVAAEVGWDGYEILQT 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G +LEN    HP  NR   +VI G+++T + GTG VHTAPGHG+ED+V   +YGLP++
Sbjct: 291 LKGKELENTVCSHPFMNRDS-LVICGEHVTLDQGTGCVHTAPGHGEEDFVVGKEYGLPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD G FTEEAG F+G     D N +++ +L +   L+      H+YP+ WR K+P +
Sbjct: 350 SPLDDRGVFTEEAGIFAG-QFCHDANKSIIAHLKDIGMLVKTGEVTHQYPHCWRCKQPIV 408

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFRQAA++AI  V+W+P
Sbjct: 409 YRATEQWFASIDGFRQAALEAIDTVRWIP 437



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 189/329 (57%), Gaps = 24/329 (7%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GDV     ++ Q ++ YRK+R T R++LGNL+D++   + + Y+D
Sbjct: 618 GADILRLWVSSADYRGDVAASENIMNQAAEAYRKIRNTCRFILGNLYDFQPEQDRVKYED 677

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           LP ++++ L +L  +++ +  +YE ++F  ++  +  F  VDLS  YFD+ KDRLYT   
Sbjct: 678 LPELERWVLLKLHKLIQRVTRAYEDFEFHVVYHSVHNFCTVDLSAVYFDIIKDRLYTSAP 737

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   + ++VR++ P+L    E++WQ     Y    G        ++WP+
Sbjct: 738 DSQGRRAAQTVLYEVIQALVRILTPVLAFTTEEIWQ-----YLRGKGDPVSVQL-TEWPL 791

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +DE++   PV E   W KIL+ R  V K LEVAR  K IG SL A V ++ D+       
Sbjct: 792 VDERYLD-PVLE-ERWDKILKAREVVTKALEVARQEKRIGHSLGAAVSIYADE-----EW 844

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           RE+  +    +++  IFI+SQV +  +           +G   +E    +W+ V  A G 
Sbjct: 845 RELLES---IESIGSIFIVSQVGLYKADDRP-------AGSVELEDVQGLWVAVEPASGQ 894

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW  + +VG+  EHPTLC RC  V+
Sbjct: 895 KCERCWVITPEVGTDPEHPTLCPRCLAVV 923


>gi|420143358|ref|ZP_14650859.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
           garvieae IPLA 31405]
 gi|391856877|gb|EIT67413.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
           garvieae IPLA 31405]
          Length = 928

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 206/332 (62%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW  PY+TL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWERPYMTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+         G L E   D+   +WTTTPWT+PAN  + V+  
Sbjct: 197 EIEYQDVR-SASIFVAFK----AKDVKGRLPE---DVEFVIWTTTPWTLPANMGIFVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIK 180
            +Y+VV++ S                        + F+I +  L    E  +W    V+ 
Sbjct: 249 YEYSVVKVGS------------------------RKFVIASEMLSKVAEILEWENPTVL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +TL GSD++     HP  +R+  +++ GDY+T +SGTGLVH+APGHG++DY  S KY L 
Sbjct: 284 QTLKGSDMDMMTAHHPFYDRES-LIMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLE 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VLSPVDNRGYYTDEAPGLEGV-FYDEGNKIVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 402 VIFRATPQWFASIDDFRENILSEIEQVDWIIP 433



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 184/345 (53%), Gaps = 43/345 (12%)

Query: 332 PQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ + 
Sbjct: 604 PSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTTDFDKN 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++SY++L  +D+Y L +   +VK +RE+Y+SY F  +++ +  F+  DLS FY D AK
Sbjct: 664 TNAVSYENLRSVDKYMLVKFNTLVKAVREAYDSYNFMSVYKQVINFLTNDLSAFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     +  RRS QTV+   L  + +++ PILPH AE++W  L       +    EF
Sbjct: 724 DVVYIEAANAADRRSMQTVMYTMLADLTKLLVPILPHTAEEIWSYL-------EAETEEF 776

Query: 510 VFESKWP-VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            + ++ P V D       +GE   W   L+ R +V K LE AR  KLIG SLEAKV ++ 
Sbjct: 777 AYLAEMPEVKDFTGSEELLGE---WEAFLDFRNKVLKALEEAREAKLIGKSLEAKVTVYP 833

Query: 569 DD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-- 624
           ++  +SL   L E          + ++ I+S+  V              S E   E    
Sbjct: 834 NEVVSSLLVSLDE---------NVAQLLIVSEFSV--------------SNEEAPEAALQ 870

Query: 625 -DKVWIGVSRAEGSKCERCWNYSTQVGS-FVEH-PTLCSRCYEVL 666
            D V I V +A G  C+RC      VG+   EH   LCS C  ++
Sbjct: 871 FDDVAILVEQAAGQVCDRCRRTDVTVGTDENEHLHALCSSCATIV 915


>gi|257867508|ref|ZP_05647161.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257801564|gb|EEV30494.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 929

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 202/332 (60%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 135 ADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 194

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +         LL+    D    +WTTTPWT+PAN  ++VN  
Sbjct: 195 EIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTTPWTLPANLGISVNPT 246

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y                         +L D +K   +VA DL+ T+  + G + V + 
Sbjct: 247 FAYV-----------------------QILADSRK--FVVAKDLLETVTNEIGWESVEVL 281

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAPGHG++DY+ S KYGL 
Sbjct: 282 QELAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHTAPGHGEDDYIVSKKYGLD 340

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+    + H YP+DWRTKKP
Sbjct: 341 VLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKLNFFTHSYPHDWRTKKP 399

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 400 VIYRATPQWFASIDKFRQNILDEIEKVDWIIP 431



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 181/333 (54%), Gaps = 32/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 610 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 669

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 670 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 729

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RR+ QTV     +++ +++ PI+PH AE++W +L            E+V  +++P
Sbjct: 730 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLK--------EEEEYVQLAEFP 781

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             D    TF   E  +  W   L+ R  V K LE AR  KLIG S EAKV ++  +  +A
Sbjct: 782 GYD----TFANQEELLDLWRAFLDFRDNVLKALEEARNAKLIGKSFEAKVTVYPTEP-VA 836

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL-IRNIPYSGEYLVEGKDKVWIGVSR 633
           + L+ +     D+D  Q + I         +P+ L I+    +        + V I V +
Sbjct: 837 ALLKAI-----DSDIAQLLII---------SPDFLTIKEAGEAAPEAAYQFEDVAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   + PTLC  C  ++
Sbjct: 883 AEGEVCERCRQVRVDVGVEEQLPTLCGHCAAIV 915


>gi|423367940|ref|ZP_17345372.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
 gi|401082801|gb|EJP91066.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
          Length = 921

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YAIVKVN----------------------DEK---YIIASELFETVAKTLEWENTEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 197/357 (55%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGDGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+       + ++ M  +   ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-----TTEMKVMLESI--SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 IEEAPKEAPKY----EHTAVIVAQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|325571365|ref|ZP_08146865.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325155841|gb|EGC68037.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 931

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 203/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVSGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +         LL+    D    +WTTTPWT+PAN  ++VN  
Sbjct: 197 EIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTTPWTLPANLGISVNPT 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y                         +L D +K   +VA DL+ T+  + G + V + 
Sbjct: 249 FAYV-----------------------QILADGRK--FVVAKDLLETVTNEIGWESVEVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAPGHG++DY+ S KYGL 
Sbjct: 284 QELAGDQLEKMTAKHPFYDRTSLLML-GDHVTLDAGTGLVHTAPGHGEDDYIVSKKYGLD 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+    + H YP+DWRTKKP
Sbjct: 343 VLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKLNFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 180/333 (54%), Gaps = 32/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFDPAKDSVPFEN 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RR+ QTV     +++ +++ PI+PH AE++W +L            E+V  +++P
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLK--------EEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             D    TF   E  +  W   L+ R  V K LE AR  KLIG S EAKV ++  +  +A
Sbjct: 784 GYD----TFANQEELLDLWRAFLDFRDNVLKALEEARNAKLIGKSFEAKVTVYPTEP-VA 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL-IRNIPYSGEYLVEGKDKVWIGVSR 633
           + L+ +     D+D  Q + I         +P+ L I+    +        + V I V +
Sbjct: 839 ALLKAI-----DSDIAQLLII---------SPDFLTIKEAGEAAPEAAYQFEDVAILVEK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   + PTLC  C  ++
Sbjct: 885 AEGEVCERCRQVRVDVGVEEQLPTLCGHCATIV 917


>gi|257873837|ref|ZP_05653490.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257808001|gb|EEV36823.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 931

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 202/332 (60%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +         LL+    D    +WTTTPWT+PAN  ++VN  
Sbjct: 197 EIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTTPWTLPANLGISVNPT 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y                         +L D +K   +VA DL+ T+  + G + V + 
Sbjct: 249 FAYV-----------------------QILADSRK--FVVAKDLLETVTNEIGWESVEVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAPGHG++DY+ S KYGL 
Sbjct: 284 QELAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHTAPGHGEDDYIVSKKYGLD 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+    + H YP+DWRTKKP
Sbjct: 343 VLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKLNFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 181/333 (54%), Gaps = 32/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RR+ QTV     +++ +++ PI+PH AE++W +L            E+V  +++P
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL--------KEEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             D    TF   E  +  W   L+ R  V K LE AR  KLIG S EAKV ++  +  +A
Sbjct: 784 GYD----TFANQEELLDLWRAFLDFRDNVLKALEEARNAKLIGKSFEAKVTVYPTEP-VA 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL-IRNIPYSGEYLVEGKDKVWIGVSR 633
           + L+ +     D+D  Q + I         +P+ L I+    +        + V I V +
Sbjct: 839 ALLKAI-----DSDIAQLLII---------SPDFLTIKEAGEAAPEAAYQFEDVAILVEK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   + PTLC  C  ++
Sbjct: 885 AEGEVCERCRQVRVDVGVEEQLPTLCGHCAAIV 917


>gi|420262038|ref|ZP_14764681.1| isoleucine--tRNA ligase [Enterococcus sp. C1]
 gi|394771060|gb|EJF50844.1| isoleucine--tRNA ligase [Enterococcus sp. C1]
          Length = 931

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 203/332 (61%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 ADFKRLGVSGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +         LL+    D    +WTTTPWT+PAN  ++VN  
Sbjct: 197 EIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTTPWTLPANLGISVNPT 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y                         +L D +K   +VA DL+ T+  + G + V + 
Sbjct: 249 FAYV-----------------------QILADGRK--FVVAKDLLETVTNEIGWESVEVL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAPGHG++DY+ S KYGL 
Sbjct: 284 QELAGDQLEKMTAKHPFYDRTSLLML-GDHVTLDAGTGLVHTAPGHGEDDYIVSKKYGLD 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+    + H YP+DWRTKKP
Sbjct: 343 VLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKLNFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 402 VIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 182/335 (54%), Gaps = 36/335 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFDPAKDSVPFEN 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RR+ QTV     +++ +++ PI+PH AE++W +L            E+V  +++P
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLK--------EEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             D    TF   E  +  W   L+ R  V K LE AR  KLIG S EAKV ++  +  +A
Sbjct: 784 GYD----TFANQEELLDLWRAFLDFRDNVLKALEEARNAKLIGKSFEAKVTVYPTEP-VA 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK---DKVWIGV 631
           + L+ +     D+D  Q + I         +P+ L   I  +GE   E     + V I V
Sbjct: 839 ALLKAI-----DSDIAQLLII---------SPDFL--TIKEAGEAAPEMAYQFEDVAILV 882

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +AEG  CERC      VG   + PTLC  C  ++
Sbjct: 883 EKAEGEVCERCRQVRVDVGVEEQLPTLCGHCATIV 917


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++VE+                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVEVN----------------------DEK---YIIASELFDTVSKTLEWENAEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D++   +YGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 193/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    ++++  +L  +D+Y L +L +++  ++ESYE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKESYETYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY     +  RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEAENNHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFAY--TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYIPGVNEESVQLTDMPEAVEVEGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+         +++M  +    + L+++FI+S+ ++      G 
Sbjct: 815 ARNEKVIGKSLNASITLYP-----TVEMKQMLESIR--EDLKQLFIVSEYKL-----GGT 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGETCERCWVVSETIGKDTEHETLCERCATVV 915


>gi|421765862|ref|ZP_16202642.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
 gi|407625632|gb|EKF52327.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
          Length = 928

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 207/332 (62%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PY+TL PEYEAAQI VFG+M+ +GYIY+G+KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYMTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SI+  F+         G+L E   D    +WTTTPWT+PAN  + V+  
Sbjct: 197 EIEYQDVR-SASIFVAFK----AKDVKGVLPE---DAEFVIWTTTPWTLPANMGIFVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIK 180
            +Y+VVE+                         ++ F++ +  L    E  +W    V+ 
Sbjct: 249 YEYSVVEV------------------------GERKFVVASEMLSKVAETLEWENPTVL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +T+ GS+++     HP  +R+  +V+ GDY+T +SGTGLVH+APGHG++DY  S KY L 
Sbjct: 284 QTVKGSEMDMMTAQHPFYDRES-LVMNGDYVTLDSGTGLVHSAPGHGEDDYFFSRKYKLE 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+  + + H YP+DWRTKKP
Sbjct: 343 VLSPVDNRGYYTDEAPGLEGI-FYDEGNKVVSKWLEEKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 402 VIFRATPQWFASIDDFRENILREIEQVDWIIP 433



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 179/347 (51%), Gaps = 47/347 (13%)

Query: 332 PQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ + 
Sbjct: 604 PSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTSDFDKN 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++SY+ L  +D+Y L +   +VK++RE+Y+SY F  +++ I  F+  DLS FY D AK
Sbjct: 664 RDTVSYEKLRSVDKYMLVKFNELVKSVREAYDSYNFMSVYKQIINFLTNDLSAFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL-----PFAYTLEDG 504
           D +Y     S  RRS QTV+   L  + +++ PI+PH AE++W  L      FAY  E  
Sbjct: 724 DVVYIEAANSADRRSMQTVMYTMLAGLTKLLVPIIPHTAEEIWSYLEAEEEKFAYLAEMP 783

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
            A   +F +   +L E            W   L+ R +V K LE AR  KLIG SLEAKV
Sbjct: 784 EAK--IFTASEELLGE------------WEAFLDFRDKVLKALEEAREAKLIGKSLEAKV 829

Query: 565 YLFTDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLV 621
            ++ ++  +SL   L E          + ++ I+S   V     P   ++          
Sbjct: 830 TVYPNEVVSSLLVSLDE---------NIAQLLIVSDFSVSTGVAPENAVKF--------- 871

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEH--PTLCSRCYEVL 666
              D V I V  A G  CERC      VG         LC+ C E++
Sbjct: 872 ---DDVAILVEAAAGQVCERCRRTDETVGQEENENLKNLCANCAEIV 915


>gi|257870266|ref|ZP_05649919.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804430|gb|EEV33252.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 931

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGISGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+E   D    +WTTTPWT+PAN  ++VN    
Sbjct: 199 EYKDVK-SPSIYVAFPVADG----KGILDE---DTSFVIWTTTPWTLPANLGISVNPTFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y                         ++ D +K   ++A DL+ T++A  G + V I + 
Sbjct: 251 YV-----------------------QIMADGRK--FVIAKDLLETVQAAIGWESVEILQE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           +AG  LE     HP  +R   V++ GD++T E+GTGLVHTAPGHG++DY+ S KY L +L
Sbjct: 286 IAGEKLEYMTGQHPFYDRTSLVML-GDHVTLEAGTGLVHTAPGHGEDDYIVSKKYKLDVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSRGMFTEEAPGFEGI-FYDKANPMITDLLAEKGALLKLDFFVHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 404 YRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 170/328 (51%), Gaps = 30/328 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    + +SY++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTADFDPKTDMVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y L +L   +K IRE  YE Y F  I++ I  F+  DLS FY D AKD +Y   
Sbjct: 672 LRSVDKYMLVRLNETIKTIREDGYEKYNFLHIYKTIINFLTGDLSAFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP--FAYTLEDGSAAEFVFESK 514
                RR+ QTV     +++ +++ PI+PH AE++W +L    AY       +   F ++
Sbjct: 732 ENDPQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLKEEEAYVQLAELPSYESFANQ 791

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             +LD             W   L  R  V K LE AR  KLIG SLEAKV ++      +
Sbjct: 792 AELLD------------MWTAFLSFRDNVLKALEEARNEKLIGKSLEAKVTIYP-----S 834

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L ++ TA  DAD  Q + I      +    +      P +     +G     I + +A
Sbjct: 835 QPLADLLTAV-DADLAQLLIISPDFFEIKEAGSA----APEAALQFEDGA----ILIEKA 885

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           +G  C+RC    T VG   + PTLC RC
Sbjct: 886 DGEVCDRCRQVRTDVGVDEKLPTLCGRC 913


>gi|357050531|ref|ZP_09111729.1| isoleucyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
 gi|355381184|gb|EHG28311.1| isoleucyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
          Length = 931

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGISGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+E   D    +WTTTPWT+PAN  ++VN    
Sbjct: 199 EYKDVK-SPSIYVAFPVADG----KGILDE---DTSFVIWTTTPWTLPANLGISVNPTFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y                         ++ D +K   ++A DL+ T++A  G + V I + 
Sbjct: 251 YV-----------------------QIMADGRK--FVIAKDLLETVQAAIGWESVEILQE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           +AG  LE     HP  +R   V++ GD++T E+GTGLVHTAPGHG++DY+ S KY L +L
Sbjct: 286 IAGEKLEYMTGQHPFYDRTSLVML-GDHVTLEAGTGLVHTAPGHGEDDYIVSKKYKLDVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FTEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSRGMFTEEAPGFEGI-FYDKANPMITDLLAEKGALLKLDFFVHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 404 YRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 170/328 (51%), Gaps = 30/328 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    + +SY++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTADFDPKTDMVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y L +L   +K IRE  YE Y F  I++ I  F+  DLS FY D AKD +Y   
Sbjct: 672 LRSVDKYMLVRLNETIKTIREDGYEKYNFLHIYKTIINFLTGDLSAFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP--FAYTLEDGSAAEFVFESK 514
                RR+ QTV     +++ +++ PI+PH AE++W +L    AY       +   F ++
Sbjct: 732 ENDPQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLKEEEAYVQLAELPSYESFANQ 791

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             +LD             W   L  R  V K LE AR  KLIG SLEAKV ++      +
Sbjct: 792 AELLD------------MWTAFLSFRDNVLKALEEARNEKLIGKSLEAKVTIYP-----S 834

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L ++ TA  DAD  Q + I      +    +      P +     +G     I + +A
Sbjct: 835 QPLADLLTAV-DADLAQLLIISPDFFEIKEAGSA----APEAALQFEDGA----ILIEKA 885

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           +G  C+RC    T VG   + PTLC RC
Sbjct: 886 DGEVCDRCRQVRTDVGVDEKLPTLCGRC 913


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 199/330 (60%), Gaps = 37/330 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FK+ GV  DW+NPYLTLDP++EA QI VFG+M  +GYIY+G KP++WSPSS +ALAEA
Sbjct: 138 ADFKKLGVLGDWDNPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY + H S SIY  F +VS   +               +WTTTPWT+PAN  +AV+  
Sbjct: 198 EIEYHD-HTSPSIYVAFELVSENGAVE-------KGTKFVIWTTTPWTLPANLGIAVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
            +Y VV+      G+S                      +VA + V  L  K+G       
Sbjct: 250 FEYQVVKYN----GES---------------------YLVAKERVAFLAEKFGWENYETG 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY-VTSLKYGL 239
           + L G DLE     HP  +R   +++  DY+T +SGTGLVHTAPGHG +DY V  L+Y L
Sbjct: 285 EVLVGKDLEYLLCKHPFLDRTSTLIL-ADYVTLDSGTGLVHTAPGHGVDDYLVGQLQYKL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +LSPVD++G  TEEAG+F+G  V  D N  ++ +LDE  +L+ +E   H YP+DWR+KK
Sbjct: 344 GVLSPVDNQGVLTEEAGQFAGKFVF-DANKDIIAHLDETGALLKQEDITHSYPHDWRSKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWF SV+ FR   ++A+   K+
Sbjct: 403 PIIFRATPQWFCSVDAFRSELLEAVDNTKF 432



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 179/332 (53%), Gaps = 41/332 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 395
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL +    N    ++Y
Sbjct: 614 GAEIIRLWSASVDYTQDVRISKDILKQVSETYRKIRNTFRFLLGNLFNGSFNNKTDLVAY 673

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           ++L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 ENLEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV-FESK 514
           G  S  R S  TVL   L   VR++APIL   AE+V+ N+P+    ED  +     F +K
Sbjct: 734 GEDSHKRLSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPY----EDAESVHLTDFPAK 789

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             + D             W K+LE+R +VNK LE +R  K+IG SLEA V ++++DA + 
Sbjct: 790 NVIEDAALEA-------KWDKLLEVRDDVNKALEESRNEKVIGKSLEAAVEVYSNDAEVV 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L  +       D L + FI+S+V V  +        + Y         D   + V++A
Sbjct: 843 ELLNSV-------DNLNQFFIVSKVAVKEND------GVAY---------DLATVKVTKA 880

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG +C+RCWN   +V        LC RC  +L
Sbjct: 881 EGHRCDRCWNIVDEVN----EEGLCPRCASIL 908


>gi|398813826|ref|ZP_10572517.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
 gi|398037879|gb|EJL31056.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
          Length = 925

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 140 FKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G L+    + G+ +WTTTPWT+PAN A++++ +L+
Sbjct: 200 EYKDKR-SPSIYVSFQVADG----KGKLD---TETGVVIWTTTPWTLPANLAISLHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV++                       D +K   +VA+ L+     + G + V I  T
Sbjct: 252 YNVVKV-----------------------DGRK--FLVANGLIEAASKEIGWEGVEILAT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE     HP  +R+ P+++ G+++T ++GTG VHTAPGHG++D+    KY L +L
Sbjct: 287 FKGQDLEGVETQHPFYDRKSPLIL-GEHVTLDAGTGCVHTAPGHGEDDFNVGQKYNLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T EA  F GL    D N  + + L E  +L+    + H YP+DWRTKKP I
Sbjct: 346 CPVDHEGKMTNEAPGFEGL-FYEDANKVITEKLKENGALLKLSFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR   ++AI  VKW+P
Sbjct: 405 YRATEQWFASIDGFRAQMLEAIKNVKWIP 433



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 188/339 (55%), Gaps = 28/339 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKMGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y++L  +D+Y L +   + K  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 ATDRVAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RR+ QTV+   LLS+V+++AP+LPH A++VW  +P       G   +
Sbjct: 724 KDRLYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIP-------GVEEK 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P  DE+  +F       W   L +R EV K +E AR  K+ G+S++AK+ L+ 
Sbjct: 777 SVQLTDMPEGDEQHLSFAAEAESKWDAFLAIRDEVLKAMEEARRNKVFGNSVDAKLALYP 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLP-STPNGLIRNIPYSGEYLVEGKDKV 627
               +A  L  M       D L  +FI++ V+V   S P   ++         +EG   V
Sbjct: 837 QTEDVAKTLAAM-------DDLADLFIVAHVDVHSGSAPAEAVQ---------LEGIAAV 880

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              VS A+G KCERC      VG+   H +LC RC +++
Sbjct: 881 ---VSAADGGKCERCRVVKPDVGTRESHASLCVRCADIV 916


>gi|315639610|ref|ZP_07894750.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484571|gb|EFU75027.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 930

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 205/331 (61%), Gaps = 38/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DWN+PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVSGDWNHPYVTLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       G+L+    D  L +WTTTPWT+PAN  ++VN K  
Sbjct: 199 EYKDVK-SPSIYVAFDVVDG----KGILD---TDTALVIWTTTPWTIPANLGISVNPKYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP--TLEAKWGTKLVIKK 181
           Y  +E                        D +K   +VA DL+   T E  W +  V+K+
Sbjct: 251 YVQIE-----------------------ADGRK--FVVAKDLLEAVTNEIGWESVTVLKE 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +AG D++     HP+ +R   V++ GD++T ++GTGLVHTAPGHG++D++   KY L I
Sbjct: 286 -VAGKDMDLMTAKHPLYDRTSLVMV-GDHVTLDAGTGLVHTAPGHGEDDFIIGKKYHLDI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D  G +T+EA  F GL      N  V + L E  +L+  + + H YP+DWRTKKP 
Sbjct: 344 LSPIDSRGCYTDEAPGFEGL-FYEKANPIVTEKLKETGALLKLDFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           IFRAT QWFAS++ FRQ  +D + +V W+ P
Sbjct: 403 IFRATPQWFASIDKFRQDILDEVDKVNWIIP 433



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 182/335 (54%), Gaps = 30/335 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S++Y+D
Sbjct: 612 GADILRLWVSSVDYESDVRVSMDILSQVSEVYRKIRNTMRFLLANTEDFNPETDSVAYED 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +VK IRE  YESY F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNKVVKEIREKGYESYNFLHIYRTVINFLTVDLSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             +  RR  QTV     +++ +++ PI+PH AE++W +L             +V  S++P
Sbjct: 732 KENHDRRCMQTVFYQTAVTLTKLLTPIIPHTAEEIWSHLK--------EEEAYVQLSEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
              E    F   E  +  W   LE R +V K LEVAR  K IG S+EAK+ ++ ++  + 
Sbjct: 784 EFQE----FANQEELLDTWVAFLEFRDKVLKALEVARNEKQIGKSMEAKLTVYPNE-QVN 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           + L+ +     D++  Q   +I   +     P G     P + +      + V   V +A
Sbjct: 839 ALLKAV-----DSNVAQ--LLIVSPDFFDVRPVG--EETPANAQVF----EDVAFVVEKA 885

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           EG  CERC    T VG+  E P LC  C EV+  +
Sbjct: 886 EGVVCERCRQMKTHVGAHHELPGLCDHCAEVVLAE 920


>gi|424679103|ref|ZP_18115934.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
 gi|424682305|ref|ZP_18119080.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
 gi|424684052|ref|ZP_18120780.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
 gi|424686881|ref|ZP_18123543.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
 gi|424690049|ref|ZP_18126585.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
 gi|424692291|ref|ZP_18128794.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
 gi|424698029|ref|ZP_18134337.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
 gi|424700556|ref|ZP_18136740.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
 gi|424716270|ref|ZP_18145583.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
 gi|424729460|ref|ZP_18158061.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
 gi|424735077|ref|ZP_18163550.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
 gi|424757104|ref|ZP_18184868.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
 gi|402349355|gb|EJU84306.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
 gi|402349384|gb|EJU84334.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
 gi|402362988|gb|EJU97498.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
 gi|402365183|gb|EJU99609.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
 gi|402366588|gb|EJV00958.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
 gi|402373647|gb|EJV07718.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
 gi|402373938|gb|EJV07986.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
 gi|402378682|gb|EJV12520.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
 gi|402388463|gb|EJV21902.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
 gi|402393914|gb|EJV27120.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
 gi|402404694|gb|EJV37310.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
 gi|402407632|gb|EJV40149.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
          Length = 933

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLSTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 187/333 (56%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD + ++ I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DAD-ISQLLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|422699562|ref|ZP_16757426.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
 gi|315171940|gb|EFU15957.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
          Length = 933

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QT+    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTIFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|257877587|ref|ZP_05657240.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811753|gb|EEV40573.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 929

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 202/332 (60%), Gaps = 36/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 135 ADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEA 194

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +         LL+    D    +WTTTPWT+PAN  ++VN  
Sbjct: 195 EIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTTPWTLPANLGISVNPT 246

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y                         +L D +K   +VA DL+ T+  + G + V + 
Sbjct: 247 FAYV-----------------------QILADGRK--FVVAKDLLETVTNEIGWESVEVL 281

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAPGHG++DY+ S KYGL 
Sbjct: 282 QELAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHTAPGHGEDDYIVSKKYGLD 340

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+    + H YP+DWRTKKP
Sbjct: 341 VLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKLNFFTHSYPHDWRTKKP 399

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 400 VIYRATPQWFASIDKFRQNILDEIEKVDWIIP 431



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 181/333 (54%), Gaps = 32/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 610 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 669

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 670 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 729

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RR+ QTV     +++ +++ PI+PH AE++W +L            E+V  +++P
Sbjct: 730 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHLK--------EEEEYVQLAEFP 781

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             D    TF   E  +  W   L+ R  V K LE AR  KLIG S EAKV ++  +  +A
Sbjct: 782 GYD----TFANQEELLDLWRAFLDFRDNVLKALEEARNAKLIGKSFEAKVTVYPTEP-VA 836

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL-IRNIPYSGEYLVEGKDKVWIGVSR 633
           + L+ +     D+D  Q + I         +P+ L I+    +        + V I V +
Sbjct: 837 ALLKAI-----DSDIAQLLII---------SPDFLTIKEAGEAAPEAAYQFEDVAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   + PTLC  C  ++
Sbjct: 883 AEGEVCERCRQVRVDVGVEEQLPTLCGHCAAIV 915


>gi|257083914|ref|ZP_05578275.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|422694610|ref|ZP_16752601.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|422698171|ref|ZP_16756091.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
 gi|256991944|gb|EEU79246.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315147954|gb|EFT91970.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315173283|gb|EFU17300.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 933

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|257081256|ref|ZP_05575617.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989286|gb|EEU76588.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 933

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EAKWGTKLVIKKT 182
           Y  VE+++                     D +K   ++A DL+ T+ EA    ++ + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAISWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V+I GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVMI-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCARIV 920


>gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
 gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
          Length = 934

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 202/329 (61%), Gaps = 28/329 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G   DW+NPYLTL P +EA QIEVFG+M+ +GYIY+G KPV+W  S  TALAEAE
Sbjct: 139 QFKRLGCRGDWDNPYLTLQPHFEAKQIEVFGEMAKKGYIYKGLKPVYWCASCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S SIY  F    A     G+L E   +  + +WTTTPWT+PAN A+AV+   
Sbjct: 199 IEYAEKK-SASIYVKF----AVKDGKGVLPE--DNTFVVIWTTTPWTIPANVAIAVHPDF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y++VE++     DS     +      +L     VF I   D +              KT
Sbjct: 252 EYSLVEVK-----DSERKGERYVIAKEMLAGVMDVFDIKFYDEL--------------KT 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LE     HP+  R   +VI G+++T E+GTG VHTAPGHG ED+     Y LP++
Sbjct: 293 IRGQELEYVVCKHPLIERDS-LVILGEHVTLEAGTGAVHTAPGHGLEDFEIGKVYNLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D++G+FTEE G F G D   +GN  VV  LD+  +L+  E   H+YP+ WR K P +
Sbjct: 352 NPIDNKGRFTEEGGIFCGQDT-NEGNKNVVIELDKVGALLKLEWIRHQYPHCWRCKNPIL 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS++GFR+ A++AI +V+W+P
Sbjct: 411 FRATEQWFASIDGFRKEALEAIKEVQWIP 439



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/336 (37%), Positives = 198/336 (58%), Gaps = 33/336 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY  DV +   +L+QMS+ YRK+R T RY+LGNL+D+    +++ Y+ 
Sbjct: 623 GADILRLWVSSADYKADVALSSNILKQMSEAYRKIRNTARYILGNLYDFDPAKDTVPYEQ 682

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++AL +L  + K +  +Y +Y+F  ++  I  F  VD+S FY D+ KDRLYT   
Sbjct: 683 MEELDKWALLKLHKLSKRVLNAYRNYEFHILYHAIHNFCAVDMSAFYLDIIKDRLYTSLP 742

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
           +S  RR+ QTV+   + ++VR+IAP+L + AE++W+ +P  Y  E+  + +    +  P 
Sbjct: 743 SSVERRAAQTVMYEIINTLVRLIAPVLSYTAEEIWRYIP--YKEENLISVQL---ADMPK 797

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E +    + +   W K++++R EV K LE AR  K+IG SL A+V+++ D+     +L
Sbjct: 798 VNEAYLDQALEDK--WEKVIKIREEVAKELEKARRDKVIGHSLNAQVHIYPDE-----KL 850

Query: 578 REMCTAKHDADTLQRIFIISQV------EVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
           R         + L  IFI+S V      EVLP   +            + E    + + V
Sbjct: 851 RAFLAPLQ--EQLATIFIVSSVQIHEPEEVLPEAAS------------VSEEVPGLAVTV 896

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           ++A G KCERCW YS +VG   +HP++C RC EV+A
Sbjct: 897 NQAPGEKCERCWVYSPEVGKNADHPSICPRCAEVVA 932


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/332 (46%), Positives = 200/332 (60%), Gaps = 38/332 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLTL PE+EA QI +FG M  +G IY+G KPV+WSPSS + LAEAE+
Sbjct: 145 FKRLGVAGDWENPYLTLAPEFEAQQIRLFGDMYEKGLIYKGAKPVYWSPSSESTLAEAEI 204

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F+       T G L E   +    +WTTTPWT+P+N A+AVN   +
Sbjct: 205 EYQDVE-SPSIYVAFKA----RDTKGKLPE---NTEFIIWTTTPWTIPSNMAIAVNPNFE 256

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VV           A A++K               +VA+DLV +L  E +W    V  +
Sbjct: 257 YSVV-----------AVADRK--------------FVVATDLVNSLATELEWVDYTVEGE 291

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G DLE     HP  +R   ++I GD++TTESGTGLVHTAPGHG++DY  SL Y L +
Sbjct: 292 PVKGHDLEYMVAEHPYYDRDS-LLILGDHVTTESGTGLVHTAPGHGEDDYFASLNYNLDV 350

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+DD+G FT+EA  F G+     GN   ++ + E   L+  + + H YP+DWRTKKP 
Sbjct: 351 LSPLDDQGHFTDEAPGFEGI-FYEKGNEISIEKMKENNRLLKLDYFSHSYPHDWRTKKPV 409

Query: 302 IFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
           I+RAT QWF SVE  R+  +D I  +VKW  P
Sbjct: 410 IYRATPQWFCSVEKIRERTLDVIDNEVKWWHP 441



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 183/335 (54%), Gaps = 45/335 (13%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD+LRLWVSSVD   DV I   +L Q+++ YR++R T+R+LLGNL+D+    ++++Y+D
Sbjct: 620 GADILRLWVSSVDTYYDVRISDDILGQVAENYRRIRNTVRFLLGNLYDFDAKKDAVAYED 679

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  IDQY + +L  +V+N+R +Y+++ F  +   I  F+ +D+SNFY D AKD +Y    
Sbjct: 680 LASIDQYMMNRLNEMVRNVRHAYDTFDFMTVNHEITNFLTLDMSNFYLDYAKDVVYIELP 739

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA------EFVF 511
            S  RR+ QTV+ A   ++  ++ P++PH  E++W      Y  E+ + A      E V 
Sbjct: 740 ESAQRRNMQTVMYAVAKAVTTLLTPVIPHTTEEIW-----TYLQEEEAYAQLADFPEVVT 794

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
                 L+ KW  F           ++ R++VNK LE AR  K+IG SLEA++++   +A
Sbjct: 795 YDNADELNTKWSAF-----------MDFRSDVNKALEKAREEKVIGKSLEARLHIHA-NA 842

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
              + L  +       + L    ++SQ++V        + N+         G+D   I +
Sbjct: 843 DTKALLDSV------GEDLATYLMVSQLDV------HQVDNL---------GEDAYTIDI 881

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             A G+ CERC     +VG+    P LC+RC +++
Sbjct: 882 EHALGATCERCRAVKEEVGTIEAAPHLCARCADIV 916


>gi|423612110|ref|ZP_17587971.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
 gi|401247117|gb|EJR53461.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
          Length = 921

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 139 FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 199 EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWTLPANLGISVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 251 YSIVKVN----------------------DEK---YIIASELFDTVAKTLEWENTEVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  +R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 285 TVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLEV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 403 IFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 196/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    N++   +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFNPSENTVVAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHA 705

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 492 WQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P A   +++  +  E V       L  KW  F           + LR +V K LEV
Sbjct: 766 WPYVPGAEEESVQLTNMPEVVEVDGAEALKTKWDAF-----------MTLRDDVLKALEV 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+   A + + L  +      ++ L+++FI+S+ ++      G+
Sbjct: 815 ARNEKVIGKSLNASITLYP-TAEMKAMLESI------SEDLKQLFIVSEYKL-----GGM 862

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 863 MEEAPADAPKY----EHTAVVVAQATGDTCERCWVVSETIGKDAEHETLCERCATVV 915


>gi|392987359|ref|YP_006485952.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
 gi|392334779|gb|AFM69061.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
          Length = 930

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDP YEAAQI VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVAGDWEHPYVTLDPSYEAAQIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        GLL+E   D    +WTTTPWT+PAN  +AVN    
Sbjct: 199 EYKDVK-SPSIFVAFNVKDG----KGLLDE---DTAFVIWTTTPWTLPANQGIAVNPTYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y ++E                        D +K   +VA DL+  ++ + G + + + K 
Sbjct: 251 YVLIE-----------------------ADGRK--FVVAKDLLEKVQTEIGWSDVQVLKE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           +AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPGHG++DY+   +Y LP++
Sbjct: 286 IAGQEMEYMTAWHPFYERES-LVILGDHVTLDAGTGLVHTAPGHGEDDYIAGNRYKLPVV 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G +TEEA  F G+      N  +   L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSKGVYTEEAPGFEGV-FYDKANPMITDLLQEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS++ FRQ  ++ + +V W+ P
Sbjct: 404 YRATPQWFASIDDFRQNILEEVEKVDWIIP 433



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 187/343 (54%), Gaps = 34/343 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +    +GAD+LRLWV+SVDY  DV +   +L Q++++YRK+R T+R+L+ N  D+  
Sbjct: 603 LPDKVIKQFGADILRLWVASVDYEADVRVSMDILSQVAEVYRKIRNTMRFLIANTEDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 447
             ++IS+++L  +D+Y   +L  ++K IRE  YE Y F  I++ +  F+ VDLS FY D 
Sbjct: 663 QKDTISFEELRSVDKYMTIRLNEVIKEIREEGYEKYNFMHIYRTVMNFLTVDLSAFYLDF 722

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
           AKD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L            
Sbjct: 723 AKDVVYIESENDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFLK--------EEE 774

Query: 508 EFVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           EFV  S+ P     ++ +P  E  +  W   ++ R +V K LE AR  KLIG SLEAK+ 
Sbjct: 775 EFVQLSELP----GYQEYPNQEELMDTWAAFMDFRDKVLKALEEARNNKLIGKSLEAKLT 830

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQ--VEVLPSTPNGLIRNIPYSGEYLVEG 623
           ++ ++     ++R + TA  DAD  Q + I+S    EV+ +        +P +       
Sbjct: 831 IYPNE-----QVRGLLTAV-DADIPQ-LLIVSPDYYEVMSANA-----EVPEAAVKF--- 875

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            D V I V +A+G  C+RC      VG   + P LC RC  ++
Sbjct: 876 -DDVAILVEKADGQTCDRCRQIRKDVGVDEKLPHLCGRCAHIV 917


>gi|403234872|ref|ZP_10913458.1| isoleucyl-tRNA ligase [Bacillus sp. 10403023]
          Length = 922

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/328 (43%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D  + +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFPVKDGKGVLEG-------DEKIIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VV++                       D  K  +  A       E  W   + I KT 
Sbjct: 252 YSVVKV-----------------------DDTKYVLASALLEAAAKEIGW-EDVTIVKTF 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYG+ +L 
Sbjct: 288 KGRELENVVAAHPIYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGIGVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G  T EA  F GL    + N  + + L+E  +L+      H YP+DWRTKKPTIF
Sbjct: 347 PVDEKGYMTAEAEGFEGL-FYDEANKPITEKLNEVGALLKLSFITHSYPHDWRTKKPTIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   M+A+ + KWVP
Sbjct: 406 RATAQWFASIKDFRNELMEAVKETKWVP 433



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 198/361 (54%), Gaps = 37/361 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVASVDYQSDVRVSDAILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL+D+    +++  ++L  +D+Y L +L  ++  ++ SYE+Y+F  ++ 
Sbjct: 646 KIRNTFRFLLGNLNDFNPETDAVPVNELREVDRYILVKLNKLIDKVKTSYENYEFAGVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  ++LS+FY D AKD LY        RRS QTVL   LLS+ +++ PILPH A++
Sbjct: 706 SVHNFCTIELSSFYLDFAKDILYIEAENQHDRRSIQTVLYEALLSLTKLVTPILPHTADE 765

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDE---KWRTFPVGEIYFWGKILELRTEVNKVL 547
           VW ++  +   E     +     + P  DE   KW +F           +ELR +V K L
Sbjct: 766 VWSHID-SVKEESVQLVDMPNSVEIPNADELEAKWDSF-----------MELRDDVLKAL 813

Query: 548 EVARTGKLIGSSLEAKVYLFTDDAS--LASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
           E AR  K+IG SL A + L+ ++ +  L   + E          L+++FI+S  E+    
Sbjct: 814 ETARNEKVIGKSLAASIILYPNNQTKVLLDSVEE---------DLKQLFIVSGFEI---- 860

Query: 606 PNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
             G     P + +      + V I V  AEG  C+RCW  +  VG   +HPTLC+RC  V
Sbjct: 861 -GGSFEEAPENSQVF----ENVKIVVGVAEGETCDRCWVVTPTVGEDPDHPTLCTRCASV 915

Query: 666 L 666
           +
Sbjct: 916 V 916


>gi|387927108|ref|ZP_10129787.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
 gi|387589252|gb|EIJ81572.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
          Length = 924

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/385 (40%), Positives = 224/385 (58%), Gaps = 52/385 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L+    D  + +WTTTPWT+PAN  + V+ +L 
Sbjct: 199 EYKDKR-SPSIYVGFKVKDG----KGVLD---TDTQIVIWTTTPWTIPANLGITVHPELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y V              AN K +             ++A  L+ ++  E  W    V+K+
Sbjct: 251 YIV--------------ANNKGKK-----------FLIAEKLLESVSKELDWENPSVVKR 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G++LE     HP+ +R   V++ G+++TT++GTG VHTAPGHG++D+    KYGL +
Sbjct: 286 -VKGAELEYVIASHPLYDRHSLVML-GEHVTTDAGTGCVHTAPGHGEDDFNVGQKYGLDV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+PVD++G  T EA  F GL    + N A+ + L+E  +L       H YP+DWRTKKP 
Sbjct: 344 LAPVDEKGYMTNEAPGFEGL-FYDEANKAITQKLEEAGALFKLSFITHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSVD 351
           IFRAT QWFAS++ FR+  +DAI + KWVP           ++   +     R+W   + 
Sbjct: 403 IFRATSQWFASIKDFRKELLDAIKETKWVPAWGETRLHNMVRDRGDWCISRQRVWGVPIP 462

Query: 352 Y----TGDVMIGPQVLRQMSDIYRK 372
                 G+ +I  + +  +SD++RK
Sbjct: 463 VFYAENGEPIITDETINHVSDLFRK 487



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/363 (36%), Positives = 204/363 (56%), Gaps = 41/363 (11%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSLGNVV-VPAKVMNQLGADILRLWVASVDYQSDVRVSDSILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +++SY+DL  +DQ+ L +L  ++K + ESY +Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPEKDAVSYEDLREVDQFMLVKLNKLIKLVHESYGNYEFSGIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +DLS FY D AKD LY     +  RRS QTVL   LL++ +++APIL H A++
Sbjct: 705 AVNNFCTIDLSAFYLDFAKDVLYIEAADNKERRSIQTVLYESLLALTKLVAPILSHTADE 764

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           VW ++PF    +++     E+        L+EKW  F           ++LR +V K LE
Sbjct: 765 VWAHIPFVEEESVQLTDLPEYKELPNAKALEEKWTKF-----------MKLRDDVLKALE 813

Query: 549 VARTGKLIGSSLEAKVYLFT--DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS-- 604
            AR  K+IG SL AKV L+   +  +L   ++E          ++++FI+S  E+  S  
Sbjct: 814 EARNAKIIGKSLTAKVTLYVNGNTKALLDSIKE---------NVKQLFIVSGFEIAGSYD 864

Query: 605 -TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY 663
             P+  ++             D   I VS+AEG  CERCW  + +VG   EHPTLC RC 
Sbjct: 865 EAPDHALK------------LDTAAIIVSKAEGETCERCWVVTPEVGQDHEHPTLCPRCA 912

Query: 664 EVL 666
            ++
Sbjct: 913 AIV 915


>gi|452974554|gb|EME74374.1| isoleucyl-tRNA ligase [Bacillus sonorensis L12]
          Length = 920

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 203/331 (61%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 138 AQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  +AV+  
Sbjct: 198 EIEYQDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTTTPWTIPANLGIAVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
           L+Y+VV      EG S                      ++AS LV ++    G     + 
Sbjct: 250 LEYSVV-----AEGGSR--------------------YVIASALVESVAKAVGFENPEVV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL 
Sbjct: 285 QTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD++G  T EA  F GL      N  + + L+E  +L+  +   H YP+DWRTKKP
Sbjct: 344 VLCPVDEKGNMTSEAPGFEGL-FYDQANKPITEKLEENGALLKLDFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 403 TIFRATAQWFASIKDFRNELLEAVKETKWVP 433



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 190/344 (55%), Gaps = 38/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++ +DL  +DQY L +L N+++ ++++YE Y F  I+  +  F  ++LS FY D A
Sbjct: 664 AKDAVAVEDLREVDQYMLIKLNNVIEKVKKAYEEYDFAVIYHTVHNFCAIELSAFYMDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD +Y        RRS QTV    L+++V+++APIL H A+++W +  F    +  L D 
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLVALVKLVAPILAHTADEMWSHFTFVTEKSVQLTDM 783

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
              + +  +K    +EK+  F           ++LR +V K LE AR  K+IG S  A +
Sbjct: 784 PETQHIPNAK--ETEEKFDRF-----------MKLRDDVLKALETARNEKVIGKSSVASL 830

Query: 565 YLFTDDAS--LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
            L+ ++ S  L S + E          L+++FI+S++     T  G     P   +    
Sbjct: 831 TLYPNEQSRTLLSSINE---------DLKQLFIVSEL-----TIAGTEAEAPEDAQTFET 876

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           GK    I V++AEG  CERC   S ++G   +HP LC RC  ++
Sbjct: 877 GK----IVVAQAEGETCERCRMVSKEIGQDSDHPELCPRCANIV 916


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4.1|SYI_DESRM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 202/329 (61%), Gaps = 35/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW NPY TL P+YEA QI VFG+M+ +GYIY+G KPV+W  S  TALAEAE+
Sbjct: 140 FQRLGVRGDWENPYYTLLPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D  + +WTTTPWT+PAN A++V+ + +
Sbjct: 200 EYAD-KTSPSIYVKFPVKDG----KGVLPQ---DAAVVIWTTTPWTLPANVAISVHPEFE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y +  +Q           N+K              I+VA +L+ + +   G +   I  T
Sbjct: 252 YVLAAVQ-----------NQK--------------IVVAKELLESFKQAVGAEEAEILAT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LE     HP  + +  +VI G+++T ++GTG VHTAPGHG+ED++   KY LP+L
Sbjct: 287 YQGEQLERVVCQHPFIDERESLVILGEHVTLDAGTGAVHTAPGHGEEDFMVGKKYELPVL 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D+ G+FT E GKF G  ++ D N  +++ L E+ +L+     +H+YP+ WR K+P  
Sbjct: 347 APIDNRGRFTSEGGKFQGQFIM-DANKTIIEELKERDALMGHVSIKHQYPHCWRCKQPIF 405

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASV+GFRQ A+ AI  VKWVP
Sbjct: 406 FRATEQWFASVDGFRQEALQAIRNVKWVP 434



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 195/329 (59%), Gaps = 23/329 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY  D+ +   +L+QM++ YRK+R T R+LLGNL+D+  V + ++YD 
Sbjct: 619 GADILRLWVSSADYRADLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPVKDKVAYDK 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  +  + +VDLS FY D+ KDRLYT   
Sbjct: 679 LPELDRVALMELHKLIKQVLAAYENYEFHIVYHAVHNYCVVDLSAFYLDIIKDRLYTAVP 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L ++VR++ P+L    E++++ +P       G     V     P 
Sbjct: 739 GSLERRAAQTVLYEALDALVRLLTPVLAFTTEEIYKYMPVV-----GDRLASVQMLDMPE 793

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++ ++    + +   W KI E+R EV K LEVAR  K+IG++LEAKV L+     +A  +
Sbjct: 794 VNVEYMDVELEKK--WDKIHEIRKEVLKALEVARKNKVIGNALEAKVDLY-----VAGDV 846

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            E+   K  A  L  +FI+S+V +     +GL        + +   + ++ + V+ AEG 
Sbjct: 847 EEVL--KPMAAELTTLFIVSKVNL-----HGLAAA---PADAVKAEELELALQVATAEGG 896

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW Y  +VG+  EH TLC RC  V+
Sbjct: 897 KCERCWMYHEEVGNDAEHATLCPRCATVV 925


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4.1|SYI_HALOH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 201/331 (60%), Gaps = 34/331 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GVW +W+ PYLTL+PEYE  QIEVFG+M+ +G  Y+GKKPVHW PS  TALAEAE+
Sbjct: 140 FKRLGVWGEWDKPYLTLNPEYEVKQIEVFGEMAKRGLFYKGKKPVHWCPSCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY E H S SIY  F +     +  G+  E  P D  + +WTTTPWT+PAN A+A++ + 
Sbjct: 200 EYGE-HRSPSIYVKFPL-KDKVNVGGV--ELTPGDSYVVIWTTTPWTIPANMAIALHPEF 255

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y VV+          A   K               +++A +LV  +  EA+     V+ 
Sbjct: 256 DYVVVK----------ASGEK---------------LVMARELVDRVMEEAEVENYKVVG 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +   G++LEN R  HP ++R   ++I GD++T E GTG VHTAPGHG +DY+  LKY L 
Sbjct: 291 QAFKGTELENKRCRHPFEDRD-SILILGDHVTLEQGTGCVHTAPGHGHDDYLVGLKYDLD 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I +P+D+ G FTEEA +F+G+    D N  V K LDE+  L+      H+YP+ WR K  
Sbjct: 350 IYAPMDNRGVFTEEAERFAGM-YYDDVNKEVTKILDEKGLLMNLSFISHQYPHCWRCKGA 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT+QWFAS+E  ++ A+ AI  V W P
Sbjct: 409 LIFRATDQWFASIEAIKEEALKAIHSVDWYP 439



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 213/350 (60%), Gaps = 29/350 (8%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           +IG V  V PQ+    YGAD+LRLWV+S ++  DV +  ++L+Q S++YR++R T R++L
Sbjct: 605 SIGNV--VSPQDVIKRYGADILRLWVASSNFKDDVRVSDRILKQNSEVYRRIRNTFRFIL 662

Query: 382 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
           GN++D+  G   + Y+D   ID++ + +L++++K++  +Y+ Y++ +++  +  F  +++
Sbjct: 663 GNINDFNPGQHYVDYNDRAEIDRWIMIKLQDLIKDVTRAYDEYEYHRVYHDVHNFCTIEM 722

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
           S+ Y D+ KDRLYT GT S +RRS Q+ L   LL +V+++AP+L H AE+VWQ+L     
Sbjct: 723 SSLYVDIVKDRLYTDGTNSLSRRSAQSTLYDILLVLVKLVAPVLAHTAEEVWQHLD---- 778

Query: 501 LEDGSAAEFVFESKWP-VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 559
            E    AE +F + WP V++E +    + +   W K+LE+R +V K LE++R  K IG+S
Sbjct: 779 -ESSKDAESIFLTDWPEVVNEYYDDRLMSK---WDKLLEVRKDVAKALELSRENKEIGNS 834

Query: 560 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
           L+A+V L   D     + R++   K + D L  +FI+SQVE+   T  G  +        
Sbjct: 835 LDARVILVPVD----DKQRQLL--KDNIDILPDLFIVSQVELQGETGEGFHKG------- 881

Query: 620 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
               +  + + V +A G KC RCW YS  VG+  EHP LC RC EV+  +
Sbjct: 882 ---SETGISVSVVKASGEKCARCWKYSEAVGNDEEHPELCERCVEVVRTE 928


>gi|410458069|ref|ZP_11311833.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
 gi|409931894|gb|EKN68868.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
          Length = 921

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL   YEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYITLTKGYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++       +G       D  + +WTTTPWT+PAN  + V+ +L+
Sbjct: 200 EYQDKR-SASIYVAFQVKDGNGVLAG-------DEKIIIWTTTPWTIPANLGICVHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y+VVE+                       D +K   ++AS L+ ++    +W    V+ K
Sbjct: 252 YSVVEV-----------------------DGEK--YVLASALLESVSKTIEWENVKVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP   R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 286 TVKGAELENVVARHPFYERDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKKYGLDV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+PVDD+G FT +A  F GL    D N  V + L E  +L+      H YP+DWRTKKP 
Sbjct: 345 LNPVDDKGYFTSQAPGFEGL-FYDDANKVVSEKLQEVGALLKLTFITHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  + AI +VKWVP
Sbjct: 404 IFRATAQWFASIKDFREQLLQAIKEVKWVP 433



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 186/334 (55%), Gaps = 27/334 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 IPNKVMDQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLSDFDP 663

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +S +DL  +D Y L +L  ++  +  SYE+Y F  I+  +  F  ++LS+FY DVA
Sbjct: 664 AVDKVSLNDLREVDVYILVKLNKVIDKVLTSYENYDFAGIYHAVNNFCTIELSSFYLDVA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   LL++ +++ PILPH AE+VW+ +P       G   E
Sbjct: 724 KDVIYIEAANSKNRRSIQTVLYETLLALTKLVTPILPHTAEEVWEYIP-------GVTEE 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V     P + E      + E   W   +E+R +V K LE AR  K+IG SL A + L+ 
Sbjct: 777 SVQLVDMPQVTEIVNAAAIEEK--WDTFMEIRDDVLKALENARNEKVIGKSLTASITLYP 834

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           +     ++ +E+     + + LQ++FI+S +E+      G   N P   +      D + 
Sbjct: 835 N-----AKYKELL---QNIEDLQKLFIVSHLEMA-----GDQGNAPSEAQSF----DTLS 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           I V  AEG  CERCW  +  VG+  EHPTLC  C
Sbjct: 878 IVVKPAEGETCERCWVVTPTVGAVAEHPTLCKDC 911


>gi|410583555|ref|ZP_11320661.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|410506375|gb|EKP95884.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 195/330 (59%), Gaps = 36/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  DW  PYLTL+PEYEA QIEVFG+M+ +GYIYR    V+W P   TALAEAE
Sbjct: 139 QFRRLGVLGDWERPYLTLEPEYEAKQIEVFGEMARRGYIYRNLYSVYWCPVDETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S SIY  F +V       G          L +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 IEYRE-KTSPSIYVAFPVVDGRGRLPGGAR-------LVIWTTTPWTIPANLAIAVHPEA 250

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK- 181
           +Y  VE                           +  ++VA  LV  + A  G +   +  
Sbjct: 251 RYVAVET-------------------------GRGLLVVAEPLVERVLAAAGLEERGRSG 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G++LE   Y HP+ +R  PVV+  ++++ E GTGLVHTAPGHGQED+    +YGLP+
Sbjct: 286 PWTGAELEGVTYRHPLFDRTSPVVLA-EHVSMEEGTGLVHTAPGHGQEDFEVGRRYGLPV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVD  G+FT EAG F+GL    D N  + + L+E  +L+ +    H+Y + WR ++P 
Sbjct: 345 LSPVDASGRFTGEAGPFAGL-FYADANPHITRALEEAGALLAQGTIRHQYAHCWRCRQPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASVEGFR+ A++AI  V+W+P
Sbjct: 404 IFRATTQWFASVEGFRRQALEAIDGVRWIP 433



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 169/331 (51%), Gaps = 15/331 (4%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGADVLRLW  S DY GDV I   +L+QM+++YRK+R TLR+LL NL D+    +++ Y 
Sbjct: 614 YGADVLRLWAVSSDYRGDVRISEDILKQMAEVYRKIRNTLRFLLANLGDFDPARDAVPYG 673

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D++AL +L  + + +R +YE YQ+  ++  +  F + DLS FY DV KDRLY   
Sbjct: 674 ELGELDRWALARLAQVTERVRRAYEEYQYHLVYHAVHNFCVTDLSAFYLDVLKDRLYASL 733

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RR+ QTVL      +  ++AP+L H AE+VW +LP    LE     E V  +  P
Sbjct: 734 PADPRRRAAQTVLYQLARHLTLLLAPVLCHTAEEVWGHLP---RLE--GDPESVHLALLP 788

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             D  WR   +   Y    + E+R  V + LE AR  K+I    EA+V +       A  
Sbjct: 789 EPDAAWRDEELLRRY--EVLFEVREAVYRALEQARQEKVIDVPAEARVVIAGAREEAARV 846

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK-VWIGVSRAE 635
           L  +      +  L  +F++++V V P    G                 +   + V R +
Sbjct: 847 LEAL------SRDLPELFLVAEVVVEPGPAAGTAGEGAGGPGQAAGQPARDPAVRVERTD 900

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++C RCW +   VG    HP LC RC  V+
Sbjct: 901 LARCARCWRHVPGVGGDAAHPDLCPRCAAVV 931


>gi|375008105|ref|YP_004981738.1| isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|359286954|gb|AEV18638.1| Isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 924

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 202/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D  + +WTTTPWT+PAN A+AV+ +L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWTTTPWTIPANLAIAVHPELD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y VVE                         QK V   VA+ LV ++  E  W    V+ K
Sbjct: 251 YHVVETNG----------------------QKYV---VAAALVESVANEVGWDAWSVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+
Sbjct: 285 TVKGNELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+      H YP+DWRTK+PT
Sbjct: 344 LCPVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPT 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++  R   + AI + KW+P
Sbjct: 403 IFRATTQWFASIDKIRSELLQAIKETKWIP 432



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 189/338 (55%), Gaps = 23/338 (6%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+ Y F  ++  +  F  V+LS FY D+A
Sbjct: 663 NENAVPIGELGEVDRYMLAKLNKLIAKVKKAYDRYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E+  + +
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRRENVESVQ 780

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
                +   +D +        +  W   +++R ++ K LE AR  K+IG SL A V ++ 
Sbjct: 781 LTDMPEPIAIDSE-----EALLAKWDAFMDVRDDIFKALENARNEKVIGKSLTASVIVYP 835

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            D +     R++  A  DAD L+++ I+S   +     +      P   E L    D V 
Sbjct: 836 KDEA-----RKLL-ASLDAD-LRQLLIVSAFSIADEPYDA----APAEAERL----DHVA 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V  AEG  CERCW  +  VG    HPTLC RC  ++
Sbjct: 881 VIVRPAEGETCERCWTVTPAVGQDPSHPTLCPRCAHIV 918


>gi|336392794|ref|ZP_08574193.1| isoleucyl-tRNA synthetase [Lactobacillus coryniformis subsp.
           torquens KCTC 3535]
          Length = 429

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 195/323 (60%), Gaps = 33/323 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYRG KP+HWSPSS +ALAEAE
Sbjct: 138 DFKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYRGNKPIHWSPSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY +     + Y             G+L+    D    VWTTTPWT+PA+  + V A+ 
Sbjct: 198 LEYKDIESPSAYYG-----EQVKDGKGILDT---DTYFVVWTTTPWTIPASEGIVVEAEY 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKK 181
            Y+VV+           PA +  +             +VAS+L+ TL  K G + V + K
Sbjct: 250 DYSVVQ-----------PAGEDRK------------FVVASELINTLAEKAGWQDVKVLK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL G D+E     HP    +  +V+ GDY+T +SGTGLVHTAPG G +D+    KYGL I
Sbjct: 287 TLKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHTAPGLGDDDFKVGKKYGLDI 346

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVDD+G+ T+EA  F GL    D N   +K +++   ++ +EPY H YP DWRTKKP 
Sbjct: 347 LSPVDDQGRLTDEAPGFEGL-FYEDANKLSIKKVEDAGLMLKQEPYLHSYPMDWRTKKPV 405

Query: 302 IFRATEQWFASVEGFRQAAMDAI 324
           IFR+T QWFASV+ FR   + AI
Sbjct: 406 IFRSTPQWFASVDAFRDQILAAI 428


>gi|307278946|ref|ZP_07560005.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
 gi|306504333|gb|EFM73544.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
          Length = 933

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|410455447|ref|ZP_11309327.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
 gi|409929274|gb|EKN66359.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
          Length = 923

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 200/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D+ + +WTTTPWT+PAN  ++V+  L 
Sbjct: 199 EYQDKR-SASIYVGFNVKDG----KGVLD---TDIQIVIWTTTPWTIPANLGISVHPDLT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV +                       + KK  I  A     T E  W   +VI+K +
Sbjct: 251 YVVVSV-----------------------NDKKFLIAEALLEAVTKEIGWEDAVVIQK-V 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G++LE    VHP+ +R   V++ G+++TT++GTG VHTAPGHG++D+    KYGL +L 
Sbjct: 287 KGAELERIVAVHPLYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFYIGQKYGLDVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G  T EA  F GL      N  + + L++  +L+      H YP+DWRTKKP I+
Sbjct: 346 PVDDKGVMTSEAPGFEGL-FYDTANKPIAQALEDAGALLKLSFITHSYPHDWRTKKPVIY 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 405 RATAQWFASIKDFRDDLLEAVKETKWVP 432



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 191/340 (56%), Gaps = 30/340 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 603 VPAKVMNQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLADFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N +SY++L  +DQ+ L +L  ++K +R +YE+Y+F  I+  +  F  +DLS FY D A
Sbjct: 663 TVNKVSYENLREVDQFMLVKLNKLIKYVRNAYENYEFAGIYHAVNNFCTLDLSAFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 506
           KD LY        RR+ QTVL   LL++ ++++PIL H A++VW+ +P     +++    
Sbjct: 723 KDVLYIEAENHHDRRAIQTVLYESLLALTKLVSPILSHTADEVWKFIPNVQEESVQLTDF 782

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            E+   +   VL+EKW  F           ++LR +V K LE AR  K+IG SL AKV L
Sbjct: 783 PEYRELAGSNVLEEKWTAF-----------MKLRNDVLKALEEARNQKVIGKSLTAKVTL 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  D S A             + L ++FI+S  EV      G     P +   L    + 
Sbjct: 832 YVTDNSKA-------LLDSIEENLTQLFIVSGFEVA-----GTYDQAPENAVKL----ET 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V++AEG  CERCW  + +VG   EH TLC RC +V+
Sbjct: 876 AAIVVTKAEGETCERCWIVTPEVGQDPEHKTLCPRCADVV 915


>gi|307290035|ref|ZP_07569959.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306498877|gb|EFM68371.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
          Length = 933

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATTQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25.1|SYI_GEOTN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 201/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDGKGVLQG-------DERIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y +VE            AN +               +VA+ L  ++  E  W    V+ K
Sbjct: 251 YYIVE------------ANGQK-------------YVVAAALAESVAKEVGWEAWSVV-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+
Sbjct: 285 TVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD+ G  TEEA  F+G+    + N A+ + L+E  +L+      H YP+DWRTK+PT
Sbjct: 344 LCPVDERGYMTEEAPGFAGM-FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKQPT 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++  R   +DAI + KWVP
Sbjct: 403 IFRATTQWFASIDKIRDQLLDAIKETKWVP 432



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPVGELGELDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY        RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E   + +
Sbjct: 723 KDILYIEAADCRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRKEQVESVQ 780

Query: 509 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
                +   +D        GE   +  W   +++R ++ K LE AR  K+IG SL A V 
Sbjct: 781 LTDMPEPMAID--------GEEALLAKWDAFMDVRDDILKALENARNEKVIGKSLTASVT 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  D      +R +  + +  + L+++ I+S   V   + +      P   E L    +
Sbjct: 833 VYPKD-----EVRALLASIN--EDLRQLLIVSAFSVADESYDA----APAEAERL----N 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + V  AEG  CERCW  +  VG    HPTLC RC  ++
Sbjct: 878 HVAVIVRPAEGETCERCWTVTPDVGRDESHPTLCPRCAHIV 918


>gi|256960187|ref|ZP_05564358.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293382552|ref|ZP_06628486.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387847|ref|ZP_06632386.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|312901038|ref|ZP_07760329.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312906845|ref|ZP_07765842.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312978900|ref|ZP_07790626.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|256950683|gb|EEU67315.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291080100|gb|EFE17464.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082694|gb|EFE19657.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627099|gb|EFQ10382.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|311288337|gb|EFQ66893.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311291864|gb|EFQ70420.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
          Length = 933

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|229546850|ref|ZP_04435575.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|257086362|ref|ZP_05580723.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089412|ref|ZP_05583773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307272017|ref|ZP_07553283.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307289395|ref|ZP_07569349.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|312904565|ref|ZP_07763723.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|422689640|ref|ZP_16747744.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
 gi|422703300|ref|ZP_16761122.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|422722956|ref|ZP_16779505.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|422730877|ref|ZP_16787258.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|422739829|ref|ZP_16794995.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|424671135|ref|ZP_18108150.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
 gi|229308015|gb|EEN74002.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256994392|gb|EEU81694.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998224|gb|EEU84744.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306499650|gb|EFM69013.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306511312|gb|EFM80316.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|310632078|gb|EFQ15361.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|315026979|gb|EFT38911.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315144388|gb|EFT88404.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315162932|gb|EFU06949.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|315165132|gb|EFU09149.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|315577381|gb|EFU89572.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
 gi|402359695|gb|EJU94320.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
          Length = 933

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|422685581|ref|ZP_16743797.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
 gi|315029692|gb|EFT41624.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
          Length = 933

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQQIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|390935118|ref|YP_006392623.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
 gi|389570619|gb|AFK87024.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
          Length = 927

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 150/331 (45%), Positives = 209/331 (63%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G KPV+W     TALAEA
Sbjct: 138 AQFIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+V       G++++ L +L   +WTTT WT+PAN A+ +N  
Sbjct: 198 EIEYSD-EKSDSIYVKFRVVDDLGKFKGIVDD-LSNLYFVIWTTTTWTIPANLAICLNPD 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+                  ++ GN +        I+A D++ ++E + G +   I 
Sbjct: 256 FDYAL------------------AKYGNEI-------YIMAKDMLDSIEKETGLSNSQII 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  GS+LE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED+V   KYGL 
Sbjct: 291 ATFKGSELEGMKAKHPLFDR-TSLIILGEHVTQEAGTGCVHTAPGHGEEDFVVGQKYGLD 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+PVDD+G+FTE+AGK++GL    D N  + + L+   +L+  + + H YP+ WR K P
Sbjct: 350 VLNPVDDKGRFTEKAGKYNGL-FYSDANKVIKEDLERANALLASKTFTHSYPHCWRCKNP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASV+GFR  A+ AI +V W+P
Sbjct: 409 VIFRATEQWFASVDGFRNEALKAIKEVNWIP 439



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 192/335 (57%), Gaps = 25/335 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 391 NSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
             +  YD+L  ID++AL++   +VK++ E+++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDLLPYDELLDIDKWALYKYNELVKDVTEAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAE 508
           DRLYT    S  R++ QT L   L   VR+IAP+L   A+++W     +Y   D  +  E
Sbjct: 731 DRLYTFPAASKERKAAQTTLYTILNGFVRIIAPVLTFTADEIW-----SYMQHDAKNNFE 785

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  + WP  ++ +    +  I  W K+ ++R +++K LE++R+ K IG SLEA+V ++ 
Sbjct: 786 SVQLADWPEPNDIYDNKQI--IDNWNKLFDIRKDISKALEISRSNKEIGHSLEAQVDIY- 842

Query: 569 DDASLASR-LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
                ASR L E    K   +    +FI+S+  VL      +  +   S +Y       +
Sbjct: 843 -----ASRELYEFL--KQFEEDFNTVFIVSKT-VLHENDEVIPDDAYKSEDY------DI 888

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            I +S A G KCERCW YS  VG   EHPT+CSRC
Sbjct: 889 AIKISHAPGEKCERCWMYSETVGEDKEHPTICSRC 923


>gi|328957135|ref|YP_004374521.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673459|gb|AEB29505.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 929

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 206/329 (62%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W++PY+TL  EYE AQI VFG+M+ +GYIY+G KP++WSPSS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDHPYVTLTKEYEEAQIRVFGKMAEKGYIYKGLKPIYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GL++E   D    +WTTTPWT+P+N A+ V+ +  
Sbjct: 199 EYKDVK-SASIYVGFKVVDG----KGLIDE---DTSFVIWTTTPWTIPSNLAITVHPEYD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP--TLEAKWGTKLVIKK 181
           Y+V                       V+ D KK   ++A DL+   T E  W     IK+
Sbjct: 251 YSV-----------------------VVADGKKY--VLAKDLIDAVTEEIGWNQVETIKE 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L G DLE     HP+ +R   ++I GD++T E+GTGLVHTAPGHG +D++   KY L +
Sbjct: 286 -LKGKDLEFMTAQHPMYDR-TSLLILGDHVTLEAGTGLVHTAPGHGDDDFIVGQKYKLSV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVDD+G FT+EA    G+    DGN  + ++L+++ +L+    + H YP+DWRTKKP 
Sbjct: 344 LSPVDDKGCFTDEAPGLEGI-FYNDGNKVITEWLEKEGALLKLNFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 403 IFRATPQWFASIDQFRGDILEAVEGVEWV 431



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 180/338 (53%), Gaps = 29/338 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D+   
Sbjct: 604 PSKVIKQMGADIVRLWVSSVDTQADVRVSDEILKQVSEVYRKIRNTMRFLLANTTDYDPS 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N + + DL  +D+Y + +L  +V+     Y+ Y+F  I+Q+I  F  VDLS FY D AK
Sbjct: 664 ANKVDFHDLRSVDKYLMIRLNQLVEKAEGHYDRYEFSSIYQLINNFCTVDLSQFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     ++ RR+ QTV    L+ I +++ PILPH AE++W  L            EF
Sbjct: 724 DVVYIEAEDAYERRAMQTVFYEVLVKITKLLTPILPHTAEEIWSFL--------SETDEF 775

Query: 510 VFESKWPVLDEKWRTFPVGEIY-FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           V  +  P +D   R     E+   W   +++R  V K LE AR  K+IG S EAKV L+ 
Sbjct: 776 VQLTDMPAID---RYENEAELLDMWNAFMDIRDVVQKALEEARNEKIIGKSFEAKVTLYP 832

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            + +     +++  + +    L ++ I+S +E+  S     I + P +  +     + V 
Sbjct: 833 TEQT-----KDLFVSLN--SNLAQLLIVSNLEIAES-----IEDAPSNAVH----SESVA 876

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V  A G  CERC      VGS    PTLC+RC  ++
Sbjct: 877 VVVEHAHGETCERCRAIKEDVGSNENAPTLCARCAAIV 914


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35.1|SYI_DESHD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 199/329 (60%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVRGDWQNPYLTLEKEYEAAQIGVFGKMARKKYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S +IY  F +        G+L +   +  + +WTTTPWT+PAN A+ ++ + 
Sbjct: 199 IEYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTTTPWTLPANLAITLHEEF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  V+++                         K   +VA  ++ +L + W  +L ++K 
Sbjct: 252 SYVQVQVE-------------------------KEHWLVAEGMLESLRSLWNLELPVEKR 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG+ED+    KYGLP+L
Sbjct: 287 FVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEEDFNVGKKYGLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y + WR   P I
Sbjct: 346 CPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEDKIKHSYAHCWRCNNPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 405 YRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVPGV------PAGSH 778

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V   + P    +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 VQTEEMPEALPQWLDEALEKK--WDTLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 626
           +A L   LR +         L  IFI+S V++  +    P GL          + E    
Sbjct: 836 NAELEGFLRGI-------PNLSEIFIVSAVQLHSAGEEKPEGL---------SMAEDLAG 879

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             I V+ A G KCERCW Y T VG   EHPTLC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPTLCPRCASVVS 920


>gi|332686281|ref|YP_004456055.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370290|dbj|BAK21246.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 928

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 197/331 (59%), Gaps = 38/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPYLTLDP YEAA++ VFG+M+  GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGISGDWQNPYLTLDPVYEAAEVRVFGKMAELGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GLL+    D    +WTTTPWT+PAN  +AVN    
Sbjct: 199 EYKDIK-SPSIYVAFKVVDG----KGLLD---TDTSFVIWTTTPWTLPANEGIAVNPDFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVIKK 181
           Y  +++                         KK   +VA DL+ T+     W    +I K
Sbjct: 251 YVAIDVNG-----------------------KKY--VVAKDLLSTVADTIGWENPRII-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G +LE     HP   R   VV+ GD++T ++GTGLVHTAPGHG++DY+   KY L I
Sbjct: 285 TFKGKELECMTAQHPFYERTSLVVL-GDHVTLDAGTGLVHTAPGHGEDDYLVGKKYNLEI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D  G  T+EA  F G+      N  V++ L E+ +L+  + + H YP+DWRTKKP 
Sbjct: 344 LSPIDSRGMLTKEAPGFEGV-FYDKANPMVIELLKEKGTLLKLDFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           I+RAT QWFAS++ FRQ  ++ I  V W+ P
Sbjct: 403 IYRATPQWFASIDKFRQDILNNIKTVDWIIP 433



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 189/343 (55%), Gaps = 36/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P +     GAD+LRLWV SVDY  DV +   +L+Q+++IYRK+R T+R+LL N  D+  
Sbjct: 603 LPEKVIKQLGADILRLWVISVDYEADVRVSMDILKQVAEIYRKIRNTMRFLLANTDDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 447
             N + Y++L  +D+Y + +L  ++K IRE  YE Y F +I++ I  F+ VDLS+FY D 
Sbjct: 663 NKNKVHYNELRSVDKYMMIRLNQVIKEIREEGYEKYNFLRIYRQITNFLTVDLSSFYLDF 722

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
           AKD +Y     ++ RR  QTV     ++I ++++PI P  +E++WQ     Y  E     
Sbjct: 723 AKDVVYIEAENNYQRRCMQTVFYQIAVTITKLLSPIFPFTSEEIWQ-----YVKE---PE 774

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E+V  S++P  +E      + +   W   L  R +V K LE AR  KLIG SLEAKV ++
Sbjct: 775 EYVQLSEFPGFEEFTNQDELMDT--WTAFLSFRDKVLKALEEARNSKLIGKSLEAKVTIY 832

Query: 568 TDDASLASRLREMCTAKHDADTLQRI----FIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
            ++     ++R +  A  D++  Q +    F++S+ EV   T   +I       E+    
Sbjct: 833 PNE-----QVRLLLEAV-DSNVAQLLIVSEFVVSENEV--DTSKNII-------EF---- 873

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            D + + + +AEG  CERC      +G   + P LC RC +++
Sbjct: 874 -DDMKVLIEKAEGETCERCRCVRKDLGIDAKLPRLCGRCAKIV 915


>gi|255971457|ref|ZP_05422043.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256957096|ref|ZP_05561267.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077892|ref|ZP_05572253.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|384518109|ref|YP_005705414.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|397699396|ref|YP_006537184.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
 gi|430361446|ref|ZP_19426666.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
 gi|430368038|ref|ZP_19428020.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
 gi|255962475|gb|EET94951.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947592|gb|EEU64224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985922|gb|EEU73224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|323480242|gb|ADX79681.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|397336035|gb|AFO43707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
 gi|429512467|gb|ELA02073.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
 gi|429516543|gb|ELA06033.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
          Length = 928

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 141 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 201 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 253 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 288 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 347 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 406 YRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 786 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 838 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 883 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 915


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1.1|SYI_DESHY RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 139/328 (42%), Positives = 199/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G KPV+W PS  TALAEAE+
Sbjct: 140 FKRLGVRGDWKNPYLTLEKEYEAAQIGVFGKMARKKYIYKGLKPVYWCPSCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S +IY  F +        G+L +   +  + +WTTTPWT+PAN A+ ++ +  
Sbjct: 200 EYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTTTPWTLPANLAITLHEEFS 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  V+++                         K   +VA  ++ +L + W  +L ++K  
Sbjct: 253 YVQVQVE-------------------------KEHWLVAEGMLESLRSLWNLELPVEKRF 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG+ED+    KYGLP+L 
Sbjct: 288 VGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEEDFNVGKKYGLPVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y + WR   P I+
Sbjct: 347 PVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEDKIKHSYAHCWRCNNPIIY 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 406 RATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVPGV------PAGSH 778

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V   + P    +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 VQTEEMPEALPQWLDEALEKK--WDTLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 626
           +A L   LR +         L  IFI+S V++  +    P GL          + E    
Sbjct: 836 NAELEGFLRGI-------PNLSEIFIVSAVQLHSAGEEKPEGL---------SMAEDLAG 879

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             I V+ A G KCERCW Y T VG   EHPTLC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPTLCPRCASVVS 920


>gi|421074252|ref|ZP_15535292.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
 gi|392527758|gb|EIW50844.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
          Length = 928

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/338 (44%), Positives = 207/338 (61%), Gaps = 34/338 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL P YEA QIEVFG+M+ +G+IY+G K V+W  S  TALAEAE+
Sbjct: 139 FKRLGIGADWDNPYVTLRPAYEAKQIEVFGEMAKKGHIYKGLKSVYWCTSCETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S +IY  F +V    +    +N    ++   +WTTTPWT+PAN A+AV+ +L+
Sbjct: 199 EYAEKK-SHTIYVKFPLVDDKGTLPVGINA--ENVYGVIWTTTPWTMPANVAIAVHPELE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA VE Q                 G +     ++   VA D    LE+       I  TL
Sbjct: 256 YAWVESQ-----------------GEIYLLAVELIDAVAKD--NKLES-----YTILSTL 291

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+DLE   + HP   R+  +V+  DY+T E GTG VHTAPGHG +D+ T +++GLP+++
Sbjct: 292 KGADLEGVVFSHPFIERESIIVLA-DYVTLEQGTGCVHTAPGHGPDDFETGIRHGLPVIN 350

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD  G+FT E G F G+ ++ D +V V+K L  +  L+ +   +H+Y + WR K P I+
Sbjct: 351 PVDHAGRFTAEGGIFEGM-LIHDADVPVIKELAARDMLLGKGKIKHQYAHCWRCKNPVIY 409

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGAD 341
           RATEQWFASV+GFR+ A+ AI  VKW+     PG+G D
Sbjct: 410 RATEQWFASVDGFREQALQAIKDVKWI-----PGWGED 442



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/356 (37%), Positives = 212/356 (59%), Gaps = 25/356 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  + PQ+    YGAD+LRLWV+S DY  DV +   +L+Q+S++YR
Sbjct: 593 VDGDGRKMSKSVGNV--IFPQDVIKKYGADILRLWVASADYQADVRVSNDILKQLSEVYR 650

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T RY+LG++HD+    + + Y++L  ID++AL +LE + + + ++YE Y+F  I+ 
Sbjct: 651 KIRNTFRYILGSIHDFNPDTDKVGYNELLEIDRWALLRLEQVREKVTKAYEEYEFHLIYH 710

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  VDLS+ Y D+ KDR+YT    S  RR+ QTV+   + ++VR+I+P+L   AE+
Sbjct: 711 TVHNFCTVDLSSIYLDILKDRVYTALPASRERRAAQTVMYEIVNTLVRLISPVLTFTAEE 770

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VWQ++      ++ +  E V  + WP++ +++    +     W  IL +R+E+ K LE A
Sbjct: 771 VWQHMK-----QEQNMPESVQLADWPMVHDEYLNADLEAK--WTSILAMRSEITKALETA 823

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IG SL+A+V L+ +D  + ++L  M            I I+S++ V+  T     
Sbjct: 824 RRNKVIGHSLDAEVTLYAND-KIFTQLSAM------DKEWANILIVSKIHVVEDTGKA-- 874

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              P S  Y VE    + I VS+AEG KCERCW YS  VG   +H TLCSRC +V+
Sbjct: 875 ---PESA-YQVEDM-ALSIVVSQAEGQKCERCWIYSDTVGKMEKHETLCSRCDDVV 925


>gi|423073768|ref|ZP_17062505.1| isoleucine--tRNA ligase [Desulfitobacterium hafniense DP7]
 gi|361855390|gb|EHL07366.1| isoleucine--tRNA ligase [Desulfitobacterium hafniense DP7]
          Length = 922

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 199/329 (60%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVRGDWQNPYLTLEKEYEAAQIGVFGKMARKKYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S +IY  F +        G+L +   +  + +WTTTPWT+PAN A+ ++ + 
Sbjct: 199 IEYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTTTPWTLPANLAITLHEEF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  V+++                         K   +VA  ++ +L + W  +L ++K 
Sbjct: 252 SYVQVQVE-------------------------KEHWLVAEGMLESLRSLWNLELPVEKR 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG+ED+    KYGLP+L
Sbjct: 287 FVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEEDFNVGKKYGLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y + WR   P I
Sbjct: 346 CPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEDKIKHSYAHCWRCNNPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 405 YRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 187/341 (54%), Gaps = 29/341 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVPGV------PAGSH 778

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V   + P    +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 VQTEEMPEALPQWLDEALEKK--WDTLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 626
           +A L   LR +         L  IFI+S V++  +    P GL          + E    
Sbjct: 836 NAELEGFLRGI-------PNLSEIFIVSAVQLHSAGEEKPEGL---------SMAEDLAG 879

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             I V+ A G KCERCW Y T VG   EHPTLC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPTLCPRCASVVS 920


>gi|256617927|ref|ZP_05474773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256962571|ref|ZP_05566742.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256597454|gb|EEU16630.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256953067|gb|EEU69699.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 928

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 141 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 201 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 253 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 288 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 347 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 406 YRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 786 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 838 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 883 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 915


>gi|222100204|ref|YP_002534772.1| isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3.1|SYI_THENN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 152/390 (38%), Positives = 216/390 (55%), Gaps = 60/390 (15%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DWNNPY+TL P+YE   ++VF  +  QG +YR  KP++W P  RTALAEAE
Sbjct: 139 EFKRLGVRGDWNNPYITLKPDYEVKILDVFKTLVEQGNVYRSLKPIYWCPRCRTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  FR                P+L + +WTTTPWT+PAN  +A++   
Sbjct: 199 IEYHD-HRSPSIYVKFRSKDD------------PNLYIVIWTTTPWTLPANVGIALHPDF 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL--VIK 180
           +Y+VV++     GD                       ++A+DL+ T   + G     V++
Sbjct: 246 EYSVVKV-----GDERW--------------------VIATDLLETFSRETGVDCSEVVE 280

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV-TSLKYGL 239
           K + G DLE   + HP+   +   VI  DY++ E+GTG VH APGHG+EDYV   +KYGL
Sbjct: 281 K-IRGKDLEGKEFQHPIFEDKTSRVILADYVSLETGTGCVHIAPGHGEEDYVYGHVKYGL 339

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI+SPVD+EG+FT+EAGK+ G+  + D N  +++ L E+  L+      H YP+ WR K 
Sbjct: 340 PIVSPVDEEGRFTDEAGKYRGM-FIEDSNRVIIEDLKEKGILVHASTITHSYPHCWRCKG 398

Query: 300 PTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF SV+    RQ  ++ I +VKW+P           +E P +     R+W 
Sbjct: 399 PVIFRATEQWFISVDHNNLRQRVLEEIDRVKWIPEWGRNRIRSMVEERPDWCISRQRVWG 458

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
           + +        G+V + P+V+     I  K
Sbjct: 459 TPIPAVKCKECGEVTLDPKVIEHFMKIVEK 488



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 194/337 (57%), Gaps = 28/337 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGA++LRLW++S DY  D+ I  +++ Q +++Y+K+R T R+LLGNL D+   
Sbjct: 604 PMEVVEKYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYKKIRNTFRFLLGNLEDFDPE 663

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y+ L  ID++AL +L+ I+K   E Y+SY+F K++ ++ ++   +LS+ Y DV K
Sbjct: 664 LDRVPYEKLLTIDKWALGRLQEIIKRATEYYDSYEFSKVYNLVVKYCTTELSSLYLDVVK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY     S  RRS QTV+   L+++++++API+    E+V+ +L           AE+
Sbjct: 724 DRLYVEAKDSLYRRSAQTVMHEILIALMKILAPIMTFTMEEVYSHLHEKDRKYKTVQAEY 783

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
             E +  ++D+K     + E +   K+L +R +V K LE  R   +IG SL+A+V L   
Sbjct: 784 WPEYREDLIDKK-----IMEDF--EKLLSIREDVLKALEEKRQQDVIGHSLDAEVILVPR 836

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           + S+ + L E        D L+ +FI+S+V +  S  +G ++     GE LVE      +
Sbjct: 837 NDSVKALLEEY------RDVLEELFIVSKVSL--SDGSGELK-----GE-LVE------V 876

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               AEG KC+RCW Y+T++    E P +C RC  VL
Sbjct: 877 TAKHAEGEKCQRCWKYTTEISRSEEFPAVCPRCLAVL 913


>gi|229548944|ref|ZP_04437669.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229305965|gb|EEN71961.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 933

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|255974072|ref|ZP_05424658.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|255966944|gb|EET97566.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
          Length = 928

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 141 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 201 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 253 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 288 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 347 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 406 YRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 786 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 838 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 883 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 915


>gi|257415622|ref|ZP_05592616.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257157450|gb|EEU87410.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 933

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGV-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|256761761|ref|ZP_05502341.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683012|gb|EEU22707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 928

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 141 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 201 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 253 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 288 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 347 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 406 YRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTLRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 786 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 838 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 883 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 915


>gi|422729994|ref|ZP_16786389.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
 gi|315149525|gb|EFT93541.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 933

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     PN  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPNEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCANIV 920


>gi|227555113|ref|ZP_03985160.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257418593|ref|ZP_05595587.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|307268083|ref|ZP_07549471.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|307275486|ref|ZP_07556628.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|312952725|ref|ZP_07771587.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|384512700|ref|YP_005707793.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|422692293|ref|ZP_16750315.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|422705613|ref|ZP_16763409.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|422711805|ref|ZP_16768732.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|422713482|ref|ZP_16770232.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|422717491|ref|ZP_16774175.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|422727527|ref|ZP_16783968.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|422735189|ref|ZP_16791463.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|227175781|gb|EEI56753.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257160421|gb|EEU90381.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|306507874|gb|EFM77002.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306515724|gb|EFM84251.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|310629241|gb|EFQ12524.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|315034232|gb|EFT46164.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315153079|gb|EFT97095.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315156852|gb|EFU00869.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|315157638|gb|EFU01655.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315168031|gb|EFU12048.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315574253|gb|EFU86444.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581592|gb|EFU93783.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|327534589|gb|AEA93423.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 933

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782371|sp|C0ZG86.1|SYI_BREBN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 925

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G + V+WSPSS TALA+AE+
Sbjct: 140 FKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYKGLRCVYWSPSSETALADAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G L+    + G+ +WTTTPWT+PAN A++++ +L+
Sbjct: 200 EYKDKR-SPSIYVSFQVADG----KGKLD---IETGVVIWTTTPWTLPANLAISLHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV++                       D +K   +VA+ L+     + G + V I  T
Sbjct: 252 YNVVKV-----------------------DGRK--FLVANGLIEAASKEIGWEGVEILAT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+ P+++ G+++T ++GTG VHTAPGHG++D+    KY L +L
Sbjct: 287 FKGQELEGVETQHPFYDRKSPLIL-GEHVTLDAGTGCVHTAPGHGEDDFNVGQKYNLGVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD EGK T EA  F GL    D N  + + L E  +L+    + H YP+DWRTKKP I
Sbjct: 346 CPVDHEGKMTNEAPGFEGL-FYEDANKVITEKLKENGALLKLSFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR   ++AI  VKW+P
Sbjct: 405 YRATEQWFASIDGFRTQMLEAIKNVKWIP 433



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 188/339 (55%), Gaps = 28/339 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKMGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y++L  +D+Y L +   + K  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 ATDRVAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RR+ QTV+   LLS+V+++AP+LPH A++VW  +P       G   +
Sbjct: 724 KDRLYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIP-------GVEEK 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P  DE+  +F       W   L +R EV K +E AR  K+ G+S++AK+ L+ 
Sbjct: 777 SVQLTDMPEGDEQHLSFAAEAESKWDAFLAIRDEVLKAMEEARRNKVFGNSVDAKLALYP 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLP-STPNGLIRNIPYSGEYLVEGKDKV 627
               +A  L  M       D L  +FI++ V+V   S P   ++         +EG   V
Sbjct: 837 QTEEVAKTLAAM-------DDLADLFIVAHVDVHSGSAPAEAVQ---------LEGIAAV 880

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              VS A+G KCERC      VG+   H +LC RC +V+
Sbjct: 881 ---VSAADGGKCERCRVVKPDVGTRESHASLCVRCADVV 916


>gi|295113823|emb|CBL32460.1| Isoleucyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 926

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 199 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 251 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAIGWEEVEVLRE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 286 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 404 YRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 784 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 835

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 836 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 880

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 881 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 913


>gi|4836216|gb|AAD30388.1|AF096862_2 isoleucyl-tRNA synthase [Fervidobacterium pennivorans DSM 9078]
          Length = 897

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 212/392 (54%), Gaps = 60/392 (15%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TLDP+YE   ++VF  +   G +YRG KPV+W P+ RTALAEAE
Sbjct: 124 EFKRLGVKGDWEHPYITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALAEAE 183

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F+MV  P            D  + +WTTTPWT+PAN A+A++   
Sbjct: 184 IEYHD-HESPSIYVKFQMVDKP------------DTYIVIWTTTPWTIPANVAIALHPDY 230

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  +++                          + + IVA  L+    A  G    + + 
Sbjct: 231 TYVKIKVD-------------------------EEYWIVAEGLLQKFAADVGIDFEVVEK 265

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R   VV+  DY+T E GTG VHTAPGHG+EDY T LKY LP+L
Sbjct: 266 FVGKELEGKLTKHPLYDRTS-VVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNLPVL 324

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDDEG+FT+EAGK+ GL +  D N  +V+ L    SLI      H YP+ WR K P +
Sbjct: 325 SPVDDEGRFTKEAGKYEGLKIW-DANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPVM 383

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRAT QWF SV+    R   ++ I +VKW P           QE P +     R+W    
Sbjct: 384 FRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVPI 443

Query: 347 --VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 376
             V   D  G+V + P+V+   ++I ++ +GT
Sbjct: 444 PAVKCKD-CGEVTLEPKVIEHFANIVKE-KGT 473



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 180/336 (53%), Gaps = 29/336 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   
Sbjct: 586 PMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA 645

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + + Y+ L  +D++AL +L+  ++ I + YE +++ K++    ++   +LS  Y D+ KD
Sbjct: 646 DLLPYEKLLPLDKWALGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKD 705

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RRS QT L   L ++++++API+P  AE+ +Q              E V
Sbjct: 706 RLYVEAKDSIYRRSAQTALHYILEALIKILAPIIPFTAEEAYQESHL-------KRYESV 758

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
               WP + +++    + E +    +L +R +V K LE AR   +IG SL+A V +   +
Sbjct: 759 HLEYWPEVRKEFIDEALLEEF--DHLLLIRDDVLKALENARASDIIGHSLDAHVIIEAKN 816

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
             L + LR+          L+  FI+S+V  L    +GL      +G++         + 
Sbjct: 817 EELKNLLRKY------ESLLEEFFIVSKV-TLSENISGL------NGQFAN-------VL 856

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V RAEG KC+RCW Y    G  +EHP  C RC  VL
Sbjct: 857 VQRAEGQKCQRCWKYHPDTGKDLEHPETCPRCSAVL 892


>gi|29375585|ref|NP_814739.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257421252|ref|ZP_05598242.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779257|ref|ZP_06744661.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|81437154|sp|Q836V1.1|SYI_ENTFA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|29343046|gb|AAO80809.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257163076|gb|EEU93036.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453624|gb|EFG22022.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 926

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 199 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 251 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 286 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 404 YRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 784 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 835

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 836 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 880

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 881 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 913


>gi|188585946|ref|YP_001917491.1| isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|254782421|sp|B2A2I8.1|SYI_NATTJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|179350633|gb|ACB84903.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 926

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 203/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPYLTL PE+EA Q+++FG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 140 FKRLGVRGDWDNPYLTLSPEFEAEQVKLFGEMAQKGYIYKGLKPVYWCTDCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +      + G  NE    +   +WTTTPWT+PAN A+A++ + Q
Sbjct: 200 EYHDKR-SPSIYVGFHV----KDSKGEFNE--EGVEFIIWTTTPWTIPANMAIALHPEFQ 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+++                        K  +K +I VA+DL+ T+  EAK G   +I++
Sbjct: 253 YSLI------------------------KSGEKHYI-VATDLLETVAEEAKLGEYQIIRE 287

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G +LE     HP+ + +  +VI GD++T E GTG VHTAPGHG EDY  + KY L +
Sbjct: 288 -YTGRELEGIVCQHPLFDSRESLVILGDHVTLEQGTGCVHTAPGHGHEDYEVAQKYDLEV 346

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP++D G FTEEAG+F GL      N  + + LD++ +L+      H+YP  WR K+  
Sbjct: 347 LSPLNDSGVFTEEAGQFQGL-YYDKANKEITQALDKRGALLSLSFITHQYPCCWRCKESV 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFASV+GFRQ A+ AI  V W+P
Sbjct: 406 IFRATEQWFASVDGFRQDALKAIEDVDWIP 435



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 207/375 (55%), Gaps = 32/375 (8%)

Query: 297 TKKPTIFRA--TEQWFASVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYT 353
           TK  + +R   T  W    EG + +      Q   + PQ+    YGAD+LRLWV+S ++ 
Sbjct: 574 TKGESPYRECLTNGWVVDGEGKKMSK----SQGNVIAPQDITNQYGADILRLWVASSEFK 629

Query: 354 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENI 412
            DV +  ++L+Q ++ YRK+R T R++LGNL+D+    + +S+D L  ID Y L +L+ +
Sbjct: 630 QDVRVSQKILKQTAEAYRKIRNTARFILGNLYDFTPEKDYVSFDQLEEIDSYILCRLQKV 689

Query: 413 VKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAH 472
           +     +Y+ ++F + + +I  F +V+LS FY DV KDR+YT  T S  RR+ QT +   
Sbjct: 690 IDQATRAYDEFEFHEFYHLIHNFCVVELSQFYLDVIKDRIYTMPTESRERRAAQTTMYYL 749

Query: 473 LLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF 532
           L S+V+++AP+L   +E++WQ LP       G   E +  + WP ++E+     + +   
Sbjct: 750 LDSLVKMLAPVLTFTSEEIWQYLP-------GDREESIQLTDWPEVNEELVDNELEQK-- 800

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
           W   LE R EV K LE AR  K IGSSLE+K+ ++ D+  L  +L+         D L+ 
Sbjct: 801 WANFLEFRKEVAKALENARKDKKIGSSLESKILIYADE-DLFKKLQSF------EDNLEE 853

Query: 593 IFIISQVEVLPSTP-NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGS 651
           +FI+SQVE+  +      ++N   S E +    ++  I +  A+G KC RCWNY  +V  
Sbjct: 854 LFIVSQVELKKAEQLTETVKNQALSSEDV----EQASIIIEAAQGEKCPRCWNYHPEVTK 909

Query: 652 FVEHPTLCSRCYEVL 666
             E   LC RC  VL
Sbjct: 910 AEE---LCPRCSHVL 921


>gi|383787394|ref|YP_005471963.1| isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
 gi|403314392|sp|Q9XDB4.3|SYI_FERPD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|383110241|gb|AFG35844.1| Isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
          Length = 912

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 212/392 (54%), Gaps = 60/392 (15%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TLDP+YE   ++VF  +   G +YRG KPV+W P+ RTALAEAE
Sbjct: 139 EFKRLGVKGDWEHPYITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F+MV  P            D  + +WTTTPWT+PAN A+A++   
Sbjct: 199 IEYHD-HESPSIYVKFQMVDKP------------DTYIVIWTTTPWTIPANVAIALHPDY 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  +++                          + + IVA  L+    A  G    + + 
Sbjct: 246 TYVKIKVD-------------------------EEYWIVAEGLLQKFAADVGIDFEVVEK 280

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R   VV+  DY+T E GTG VHTAPGHG+EDY T LKY LP+L
Sbjct: 281 FVGKELEGKLTKHPLYDRTS-VVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNLPVL 339

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDDEG+FT+EAGK+ GL +  D N  +V+ L    SLI      H YP+ WR K P +
Sbjct: 340 SPVDDEGRFTKEAGKYEGLKIW-DANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPVM 398

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRAT QWF SV+    R   ++ I +VKW P           QE P +     R+W    
Sbjct: 399 FRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVPI 458

Query: 347 --VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 376
             V   D  G+V + P+V+   ++I ++ +GT
Sbjct: 459 PAVKCKD-CGEVTLEPKVIEHFANIVKE-KGT 488



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 180/336 (53%), Gaps = 29/336 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   
Sbjct: 601 PMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA 660

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + + Y+ L  +D++AL +L+  ++ I + YE +++ K++    ++   +LS  Y D+ KD
Sbjct: 661 DLLPYEKLLPLDKWALGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKD 720

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RRS QT L   L ++++++API+P  AE+ +Q              E V
Sbjct: 721 RLYVEAKDSIYRRSAQTALHYILEALIKILAPIIPFTAEEAYQESHL-------KRYESV 773

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
               WP + +++    + E +    +L +R +V K LE AR   +IG SL+A V +   +
Sbjct: 774 HLEYWPEVRKEFIDEALLEEF--DHLLLIRDDVLKALENARASDIIGHSLDAHVIIEAKN 831

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
             L + LR+          L+  FI+S+V  L    +GL      +G++         + 
Sbjct: 832 EELKNLLRKY------ESLLEEFFIVSKV-TLSENISGL------NGQFAN-------VL 871

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V RAEG KC+RCW Y    G  +EHP  C RC  VL
Sbjct: 872 VQRAEGQKCQRCWKYHPDTGKDLEHPETCPRCSAVL 907


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 202/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW++PY TL P+YEA QI VFG+M+ +GYIY+G KPV+W  S  TALAEAE+
Sbjct: 140 FQRLGVRGDWDHPYYTLIPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D  + +WTTTPWT+PAN A++V+ +  
Sbjct: 200 EYAD-KTSPSIYVKFPVKDG----KGVLPQ---DASVVIWTTTPWTLPANVAISVHPEFA 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKKT 182
           Y V    +++ G+                      ++VA +L+ + +   G     I   
Sbjct: 252 YVV----AMVNGEK---------------------VVVARELLESFKQAVGADNAEILAA 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LE     HP  +R+  +VI GD++T ++GTG VHTAPGHG+ED+    KY LP+L
Sbjct: 287 LKGEQLERVTCRHPFVDRES-LVILGDHVTLDAGTGCVHTAPGHGEEDFEVGKKYNLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D++G+FT E GKF+G  +L D N  +V+ L E+ +L+     +H+YP+ WR K P  
Sbjct: 346 APLDNKGRFTAEGGKFAGQFIL-DANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIF 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFRQ A+ AI  VKWVP
Sbjct: 405 FRATEQWFASVEGFRQEALKAIRNVKWVP 433



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 192/331 (58%), Gaps = 27/331 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + + Y D
Sbjct: 618 GADILRLWVSSADYRGDLSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVDYAD 677

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  I  F ++D+S FY D+ KDRLYT   
Sbjct: 678 LPELDRVALMELHKLIKRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPP 737

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L ++VR++ P+L    E+++Q++P       G     V     P 
Sbjct: 738 ASRERRAAQTVLYEVLDALVRLLVPVLAFTTEEIYQHMPVV-----GERLPSVQLLDMPR 792

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + ++    V     W KI  +R EV + LE+AR  K+IG+SLEAKV L+  D  +A  L
Sbjct: 793 ANLEY--IDVNLERKWDKIYAVRKEVLRALEMARQNKVIGNSLEAKVDLYV-DGEMAELL 849

Query: 578 REMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
             M      A  L  IFI+S V++ P    P G ++          E  D + + VS A 
Sbjct: 850 TPM------AGELATIFIVSGVKLNPLAQMPEGAMK---------AEDMD-LAVQVSPAP 893

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G+KCERCW Y  +VG   EHPTLC RC +VL
Sbjct: 894 GAKCERCWMYHEEVGHDREHPTLCPRCADVL 924


>gi|415886497|ref|ZP_11548277.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
 gi|387587184|gb|EIJ79507.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
          Length = 924

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L+    D  + +WTTTPWT+PAN  + V+ +L 
Sbjct: 199 EYKDKR-SPSIYVGFKVKDG----KGILD---TDTQIVIWTTTPWTIPANLGITVHPELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y VVE                         +K    ++A +L+ ++  E  W    ++KK
Sbjct: 251 YIVVE-------------------------EKGKKYLIAEELLESVKNELSWENPAIMKK 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G +LE     HP+ +R   V++ G+++TT++GTG VHTAPGHG++D+    KYGL +
Sbjct: 286 -IKGRELEYIIASHPLYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFNVGQKYGLDV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+PVD++G  T EA  F GL    D N ++ + L+E  +L+      H YP+DWRTKKP 
Sbjct: 344 LAPVDEKGYMTHEAPGFEGL-FYDDANKSITQKLEEVGALLKLSFITHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 403 IFRATSQWFASIKDFRNELLEAVKETKWVP 432



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 208/365 (56%), Gaps = 45/365 (12%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSLGNVV-VPAKVMDQFGADILRLWVASVDYQSDVRVSDAILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +++ Y++L  +DQ+ L +L  ++K + +SYE+Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPEKDAVPYENLREVDQFMLVKLNKLIKYVHDSYENYEFSGIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +DLS FY D AKD LY     +  RRS QTVL   LL++ +++APIL H A++
Sbjct: 705 AVNNFCTLDLSAFYLDFAKDILYIEAADNKERRSIQTVLYESLLALTKLVAPILSHTADE 764

Query: 491 VWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW ++PF    +  L D    + +  SK   L+EKW +F           ++LR +V K 
Sbjct: 765 VWSHIPFVKEESVQLTDLPKYKELPNSK--ALEEKWTSF-----------MKLRDDVLKA 811

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDAS--LASRLREMCTAKHDADTLQRIFIISQVEVLPS 604
           LE AR  K IG SL AKV L+ +D +  L   ++E          ++++FI+S  EV  S
Sbjct: 812 LEEARNAKTIGKSLTAKVTLYVNDKTKALLDSIQE---------NVKQLFIVSGFEVAGS 862

Query: 605 ---TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSR 661
               P+  ++             D   I VS+AEG  CERCW  + +VG   +HPTLC R
Sbjct: 863 YDEAPDHALK------------LDTAAIIVSKAEGETCERCWVVTPEVGQDQQHPTLCPR 910

Query: 662 CYEVL 666
           C  ++
Sbjct: 911 CATIV 915


>gi|422868627|ref|ZP_16915165.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1467]
 gi|329574341|gb|EGG55913.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 771

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 2/153 (1%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
              + RR  QTV    L+S+ +++ PI+PH  E
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTTE 771


>gi|256852656|ref|ZP_05558027.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300859774|ref|ZP_07105862.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|428766511|ref|YP_007152622.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
 gi|256712001|gb|EEU27038.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300850592|gb|EFK78341.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|427184684|emb|CCO71908.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
          Length = 926

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 199 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 251 Y--VEVKA---------------------DGRK--FVIAKDLLATVKEAVGWEEVEVLRE 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 286 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 404 YRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 783

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 784 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 835

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 836 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 880

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 881 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 913


>gi|33303921|gb|AAP22276.1| isoleucyl-tRNA synthetase [Bacillus cereus]
          Length = 422

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 204/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 23  FKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVYWSPTSESALAEAEI 82

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 83  EYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWTLPANLGISVHPELE 134

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 135 YSIVKVN----------------------DEK---YIIASELFETVAKTLEWENAEVV-K 168

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP  BR   V++ GD++TT++GTG VHTAPGHG++D+    KYGL +
Sbjct: 169 TVKGSELEYTVAKHPFYBRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFXVGKKYGLEV 227

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G    EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 228 LCPVDDKGVLXXEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 286

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 287 IFRATAQWFASIEAFRKELLEAVAETKWVP 316


>gi|392957453|ref|ZP_10322976.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
 gi|391876416|gb|EIT85013.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
          Length = 918

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 198/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TLD  +EA QIEVFG+M  +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYITLDKSFEARQIEVFGEMVKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E   D+ + +WTTTPWT+PAN  ++V+  L 
Sbjct: 200 EYHDKR-SASIYVAFPVKEG----KGVLQE---DVSIVIWTTTPWTIPANLGISVHPDLD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y VV              N   R            ++VA  LV TL  E +W    V+ +
Sbjct: 252 YVVV--------------NADGRK-----------LLVAEALVETLTKELEWKDVSVVAQ 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G +LE+    HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   +YGL +
Sbjct: 287 -MKGQELEHIVASHPLYERDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFLVGKRYGLDV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD G  T+EA  F GL    + N  + + L E  +L+      H YP+DWRTKKP 
Sbjct: 345 LCPVDDRGVMTKEAPGFEGL-FYDEANKPITEQLTEAGALLKLSFITHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++G R   + AI  VKW+P
Sbjct: 404 IFRATAQWFASIKGMRDDILQAIADVKWIP 433



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/338 (37%), Positives = 191/338 (56%), Gaps = 45/338 (13%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV +   +L+Q++++YRK+R TLR+LLGNLH +    +S+SY++
Sbjct: 613 GADILRLWVSSVDYQADVRVSDDILKQVAEVYRKIRNTLRFLLGNLHGFDPAKHSVSYEN 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY + +L  ++  ++ +Y+ YQF  ++  I  F  +DLS+FY D+AKD LY    
Sbjct: 673 LGELDQYMIVKLNKLIDRVKTAYDEYQFLSVYTAIHTFCTIDLSSFYMDIAKDTLYIQAE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RR+ QTVL   L++I +++APIL H +++VWQ++P       G   E V  S  PV
Sbjct: 733 DDPKRRNIQTVLYQALVAITKLVAPILAHTSDEVWQHIP-------GVEEESVQLSNLPV 785

Query: 518 ---------LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
                    L +KW  F           + LR EV K LE AR  K+IG SL A V L+ 
Sbjct: 786 AVSYDGEEALLQKWDVF-----------MNLRDEVLKALEQARNEKVIGKSLTASVTLYG 834

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            DA + + L  +         L +  I+S+     +T  G+  + P   +      + + 
Sbjct: 835 -DADVKALLESIA-------DLNKTLIVSE-----ATVGGVKADAPSDAQAF----EHLH 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V +AEG  CERCW  ++ VG+  +HPTLC+ C EV+
Sbjct: 878 VVVKQAEGETCERCWTVTSDVGTDQKHPTLCASCAEVV 915


>gi|352516940|ref|YP_004886257.1| isoleucyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
 gi|348601047|dbj|BAK94093.1| isoleucyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
          Length = 930

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 197/330 (59%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W  PYLTL P YEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGVQGEWEAPYLTLAPSYEAAEIRVFGKMAEKGYIYKGMKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V        LL+E   +    +WTTTPWT+P+N A+ V+    
Sbjct: 199 EYKDIK-SPSIYVSFQVVDG----KDLLDE---NTSFIIWTTTPWTIPSNLAITVHPDFN 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  V           A  NK                +VA DL+  ++   G   + I + 
Sbjct: 251 YVQVN----------ADGNK---------------YVVAKDLLDEVQEVLGWDNVEILQA 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LEN    HP  +R   ++I GD++T +SGTGLVHT+PGHG++DY  + KYGLP+L
Sbjct: 286 FKGQQLENMTAQHPFYDRTS-LLILGDHVTLDSGTGLVHTSPGHGEDDYYVAKKYGLPVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FTEEA  F G+      N  V   L E+ +L+  + Y H YP+DWRTKKP I
Sbjct: 345 SPVDSRGVFTEEAPGFEGI-FYDKANPMVTDLLKEKGALLNLDFYVHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           FRAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 404 FRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 194/344 (56%), Gaps = 36/344 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWVSSVDY  DV +   +L+Q+S++YRK+R T+R+LL N  D+  
Sbjct: 603 VPDKVIKQMGADILRLWVSSVDYESDVRVSMDILKQVSEVYRKIRNTVRFLLANTSDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 447
             N + + DL  +D+Y + +L  ++K +R++ YE Y F  +++ I  FI VDLS+FY D 
Sbjct: 663 KTNGVEFVDLRSVDKYMMIRLNEVIKEVRDNGYEKYDFLHVYRTILNFITVDLSSFYLDF 722

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
           AKD +Y     S++RR  QTV     ++I +++API+PH AE++W     +Y  E+    
Sbjct: 723 AKDVVYIEEEDSYSRRCMQTVFYQATVAIAKLLAPIIPHTAEEIW-----SYVKEE---E 774

Query: 508 EFVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           E+V  + +P     ++ +P  E  +  W   +  R +V K LE+AR  KLIG S+EAKV 
Sbjct: 775 EYVQLTDFPA----YQIYPNQEELMDIWTAFMSFRDKVLKALEIARDEKLIGKSMEAKVT 830

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK- 624
           ++ ++     +++ M TA  DA+  Q + +         +P+     +  +G+ + E   
Sbjct: 831 IYPNE-----QVKSMLTAT-DANIAQLLIV---------SPDFF--EVEEAGKKVPEDAV 873

Query: 625 --DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D V I V +A+G  CERC    T VG     PT+CS C  ++
Sbjct: 874 VFDDVAILVEKADGPVCERCRQVRTSVGENENFPTMCSHCAAIV 917


>gi|422721039|ref|ZP_16777644.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
 gi|315031711|gb|EFT43643.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
          Length = 933

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 204/330 (61%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLTTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T  +GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLNAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 186/333 (55%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD  Q + I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DADIAQ-LLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|403667695|ref|ZP_10932995.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC8E]
          Length = 926

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 204/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW NPY+TL+PE+EA QI VFG M+ +GYI++G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRIGIRADWENPYITLNPEFEARQIGVFGDMAKKGYIFKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+LN    D  L +WTTTPWT+PAN  ++VN +  
Sbjct: 200 EYKDIK-SPSIFVAFKVEDG----KGVLNN---DEELVIWTTTPWTMPANLGISVNPEFT 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y V ++           A++K               +VA +L+ T+  K G + V I + 
Sbjct: 252 YVVAKV-----------ADRK--------------FVVAKELLNTVAEKNGWEDVQIDRE 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G+ LEN    HP+ +R   V++ GD++T E+GTG VHTAPGHG++DY    +YGL IL
Sbjct: 287 INGASLENITAKHPLFDRTSLVML-GDHVTLEAGTGCVHTAPGHGEDDYQVGKRYGLEIL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           S VD+ G  TE AG+F+G+      N  + + L+E  +L+    +EH YP+DWRTKKP I
Sbjct: 346 SVVDNRGILTEAAGEFAGM-FYDKANKPICEKLEEVGALLSLTFFEHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS+E FR A + AI    + P
Sbjct: 405 FRATPQWFASIEKFRPALLQAIRDTNFTP 433



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 192/344 (55%), Gaps = 41/344 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 389
           P +    YGAD+LR+WV+SVDYT DV I   +L+Q+S++YRK+R TL+++ GNL D+   
Sbjct: 604 PAKIMQQYGADILRMWVASVDYTADVRISMDMLKQVSEMYRKVRNTLKFVHGNLADFNYE 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y+DL  +DQY   QL+ +V+ +R +Y++Y+F  +++ I  FI  +LS+FY D+AK
Sbjct: 664 TDYVKYEDLREVDQYMYMQLQKLVQTVRTAYDNYEFATVYKAINNFIATELSSFYLDIAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG----S 505
           D +Y     +  RR+ Q+VL   L ++V+++API+PH A++++  +  A+T E+      
Sbjct: 724 DVVYVEAPNNHARRAMQSVLFDTLNALVKLLAPIIPHTADEIFGYM--AWTTEESVQLTD 781

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
             + V +  +  L  K           W KI+ +R  V K LE +R  K+IG SLEA+  
Sbjct: 782 MPDAVEKDNYEALTAK-----------WAKIMTVRNVVLKSLEESRAAKVIGKSLEARAT 830

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQV---EVLPSTPNGLIRNIPYSGEYLVE 622
           ++  DA   + L E      +A    ++ I+S+    ++  +TP  +             
Sbjct: 831 VYA-DAETKAILSE------EAIDFSQLMIVSEFVVGDLADATPECV------------- 870

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V + V +AEG KC+RCW     VG    HP LC RC  V+
Sbjct: 871 KTETVAVAVVKAEGEKCDRCWTVDPTVGHNANHPDLCERCATVV 914


>gi|333897307|ref|YP_004471181.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|333112572|gb|AEF17509.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 209/329 (63%), Gaps = 30/329 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 140 FIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  FR+V       G++++ L +L   +WTTT WT+PAN A+ +N    
Sbjct: 200 EYSD-EKSDSIYVKFRIVDDLGKFKGIVDD-LSNLYFVIWTTTTWTIPANLAICLNPDFD 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+                  ++ GN +        I+A D++ ++E + G +   I  T
Sbjct: 258 YAL------------------AKYGNEI-------YIMAKDMLDSIEKETGLSNHEIIAT 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS+LE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED+V   KYGL +L
Sbjct: 293 FKGSELEGMKAKHPLFDR-TSLIILGEHVTQEAGTGCVHTAPGHGEEDFVVGQKYGLDVL 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD+G+FTE+AGK++GL    D N  + + L++  +L+  + + H YP+ WR K P I
Sbjct: 352 NPVDDKGRFTEKAGKYNGL-FYSDANKVIKEDLEKANALLASKTFTHSYPHCWRCKNPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASV+GFR  A+ AI +V W+P
Sbjct: 411 FRATEQWFASVDGFRDEALKAIKEVNWIP 439



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 193/334 (57%), Gaps = 23/334 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 391 NSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
             +  YD+L  ID++AL++   +VK++ E+++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDLLPYDELLDIDKWALYKYNELVKDVTEAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAE 508
           DRLYT   TS  R++ QT L   L   VR+IAP+L   A+++W     +Y   D  ++ E
Sbjct: 731 DRLYTFPATSKERKAAQTTLYIILNGFVRIIAPVLTFTADEIW-----SYMQHDAKNSFE 785

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  + WP  ++ +    +  I  W K+ ++R +V+K LE++R  K IG SLEA+V ++ 
Sbjct: 786 SVQLADWPEPNDIYDNKQL--IDNWNKLFDIRKDVSKALEISRANKEIGHSLEAQVDIYA 843

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                +  L E    K   +    +FI+S+  VL    +G+I +  Y  E        + 
Sbjct: 844 -----SKELYEFL--KQFEEDFNTVFIVSKT-VLHEN-DGVIPDDAYRSEDY-----DIA 889

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           I VS A G KCERCW YS  VG   EHPT+CSRC
Sbjct: 890 IKVSHAPGEKCERCWMYSETVGEDKEHPTICSRC 923


>gi|392960483|ref|ZP_10325951.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
 gi|421054760|ref|ZP_15517725.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
 gi|421061531|ref|ZP_15523846.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
 gi|421066816|ref|ZP_15528370.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
 gi|421071623|ref|ZP_15532739.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
 gi|392440441|gb|EIW18121.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
 gi|392446888|gb|EIW24159.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
 gi|392449282|gb|EIW26411.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
 gi|392453096|gb|EIW30000.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
 gi|392455060|gb|EIW31867.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
          Length = 928

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/338 (44%), Positives = 207/338 (61%), Gaps = 34/338 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL P YEA QIEVFG+M+ +G+IY+G K V+W  S  TALAEAE+
Sbjct: 139 FKRLGIGADWDNPYVTLRPVYEAKQIEVFGEMAKKGHIYKGLKSVYWCTSCETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S +IY  F +V    +    +N    ++   +WTTTPWT+PAN A+AV+ +L+
Sbjct: 199 EYAEKK-SHTIYVKFPLVDDKGTLPVGINA--ENVYGVIWTTTPWTMPANVAIAVHPELE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA VE Q                 G +     ++   VA D    LE+       I  TL
Sbjct: 256 YAWVESQ-----------------GEIYLLAVELIEAVAKD--NKLES-----YTILSTL 291

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+DLE   + HP   R+  +V+  DY+T E GTG VHTAPGHG +D+ T +++GLPI++
Sbjct: 292 KGADLEGVVFSHPFIERESIIVLA-DYVTLEQGTGCVHTAPGHGPDDFETGIRHGLPIIN 350

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD  G+FT E G F G+ ++ D +V V+K L  +  L+ +   +H+Y + WR K P I+
Sbjct: 351 PVDHAGRFTAEGGIFEGM-LIHDADVPVIKELAARGMLLGKGKIKHQYAHCWRCKNPVIY 409

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGAD 341
           RATEQWFASV+GFR+ A+ AI  V+W+     PG+G D
Sbjct: 410 RATEQWFASVDGFREQALQAIKDVQWI-----PGWGED 442



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/356 (37%), Positives = 212/356 (59%), Gaps = 25/356 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  + PQ+    YGAD+LRLWV+S DY  DV +   +L+Q+S++YR
Sbjct: 593 VDGDGRKMSKSVGNV--IFPQDVIKKYGADILRLWVASADYQADVRVSNDILKQLSEVYR 650

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T RY+LG++HD+    + + Y++L  ID++AL +LE + + + ++YE Y+F  I+ 
Sbjct: 651 KIRNTFRYILGSIHDFNPDTDRVGYNELLEIDRWALLRLEQVREKVTKAYEEYEFHLIYH 710

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  VDLS+ Y D+ KDR+YT    S  RR+ QTV+   + ++VR+I+P+L   AE+
Sbjct: 711 TVHNFCTVDLSSIYLDILKDRVYTALPASKERRAAQTVMYELVSTLVRLISPVLTFTAEE 770

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VWQ++      ++ +  E V  + WP++ +++    +     W  IL +R+E+ K LE A
Sbjct: 771 VWQHMK-----QEQNMPESVQLADWPMVHDEYLNADLEAK--WTSILAMRSEITKALETA 823

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IG SL+A+V L+ +D  + ++L  M            I I+S++ V+  T     
Sbjct: 824 RRNKVIGHSLDAEVTLYAND-KIFTQLSAM------DKEWANILIVSKIHVVEDTSKA-- 874

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              P S  Y VE    + I VS+AEG KCERCW YS  VG   +H TLCSRC +V+
Sbjct: 875 ---PESA-YQVEDM-ALSIVVSQAEGQKCERCWIYSDTVGKMEKHETLCSRCNDVV 925


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 198/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPY+TL PEYEA QI+VFG+M+  G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FMRLGVRGDWFNPYITLKPEYEAQQIKVFGEMAKNGLIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G            +WTTTPWT+PAN  +AV+A L 
Sbjct: 200 EYQDKR-SPSIYVAFKVEDGKGVLDG-------SESFIIWTTTPWTIPANLGIAVHADLD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y+VVE+                              I+A++L  T+ +  +W    V+ K
Sbjct: 252 YSVVEVNG-------------------------SKFIIAAELFETVSSTLEWEDAKVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL G++LE+    HP+ +R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL +
Sbjct: 286 TLKGAELEHVVAKHPLYDRTSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGKKYGLDV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +G  TEEA  F GL    + N  + + L E  +L+      H YP+DWRTKKPT
Sbjct: 345 LCPVDAKGNMTEEAPGFEGL-FYDEANKPITEKLQEAGALLKLNFITHSYPHDWRTKKPT 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++  R   ++A+ + KWVP
Sbjct: 404 IFRATAQWFASIDKIRDQLLEAVAETKWVP 433



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/361 (36%), Positives = 205/361 (56%), Gaps = 37/361 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSLGNVV-LPSKVMNQLGADILRLWVASVDYQSDVRVSDNILKQVAEVYR 645

Query: 372 KLRGTLRYLLGNLHDW-RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    N++   DL  +D+Y + +L N++  +++SYE Y+F  I+ 
Sbjct: 646 KIRNTFRFLLGNLADFDSTVNAVDVKDLREVDRYMMVKLNNLITKVKKSYEDYEFAGIYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  ++LS+FY D AKD LY  G     RR+ QTVL   LL++ +++ PILPH A++
Sbjct: 706 AVHNFCTIELSSFYLDFAKDILYIEGKDQHDRRAIQTVLYETLLALTKLVTPILPHTADE 765

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPV-----LDEKWRTFPVGEIYFWGKILELRTEVNK 545
           VW ++ F   +++ S          PV     ++EKW  F           + LR +V K
Sbjct: 766 VWSHIDF---VKEESVQLVDMPDVLPVDGADAIEEKWDKF-----------MALRDDVLK 811

Query: 546 VLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
            LEVAR  K+IG SL AK+ L+  +A   + L  +       + +Q++FI+S +EV    
Sbjct: 812 ALEVARNEKVIGKSLAAKITLYP-NAETKALLDSI------EENVQQLFIVSGLEVA--- 861

Query: 606 PNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
             G+    P S  ++ EG   V I V+ AEG  C+RCW  +  VG   +HPTLC RC  V
Sbjct: 862 --GVKEEAPESA-HVFEG---VAISVTPAEGETCDRCWVVTPTVGEDKDHPTLCVRCATV 915

Query: 666 L 666
           +
Sbjct: 916 V 916


>gi|227517926|ref|ZP_03947975.1| possible isoleucyl-tRNA synthetase, partial [Enterococcus faecalis
           TX0104]
 gi|227074680|gb|EEI12643.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 533

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+PAN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLPANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLSTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440


>gi|333924454|ref|YP_004498034.1| isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|333750015|gb|AEF95122.1| Isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 930

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW++PY TL P+YEA QI VFG+M+ +GYIY+G KPV+W  S  TALAEAE+
Sbjct: 140 FQRLGVRGDWDHPYYTLIPQYEATQIRVFGEMAKKGYIYKGLKPVYWCASCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L +   D  + +WTTTPWT+PAN A++V+ +  
Sbjct: 200 EYAD-KTSPSIYVKFPVKDG----KGVLPQ---DASVVIWTTTPWTLPANVAISVHPEFA 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKKT 182
           Y V  +     G+                      ++VA +L+ + +   G     I   
Sbjct: 252 YVVATVN----GEK---------------------VVVARELLESFKQAVGADNAEILAA 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  LE     HP  +R+  +VI GD++T ++GTG VHTAPGHG+ED+    KY LP+L
Sbjct: 287 LKGEQLERVTCRHPFVDRES-LVILGDHVTLDAGTGCVHTAPGHGEEDFEVGKKYNLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D++G+FT E GKF+G  +L D N  +V+ L E+ +L+     +H+YP+ WR K P  
Sbjct: 346 APLDNKGRFTAEGGKFAGQFIL-DANKTIVEELKERGALMAHGHIKHQYPHCWRCKNPIF 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASVEGFRQ A+ AI  VKWVP
Sbjct: 405 FRATEQWFASVEGFRQEALKAIRNVKWVP 433



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 192/331 (58%), Gaps = 27/331 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + + Y D
Sbjct: 618 GADILRLWVSSADYRGDLSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVDYAD 677

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  I  F ++D+S FY D+ KDRLYT   
Sbjct: 678 LPELDRVALMELHKLIKRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPP 737

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L ++VR++ P+L    E+++Q++P       G     V     P 
Sbjct: 738 ASRERRAAQTVLYEVLDALVRLLVPVLAFTTEEIYQHMPVV-----GERLPSVQLLDMPR 792

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + ++    V     W KI  +R EV + LE+AR  K+IG+SLEAKV L+  D  +A  L
Sbjct: 793 ANLEY--IDVNLERKWDKIYAVRKEVLRALEMARQNKVIGNSLEAKVDLYV-DGEVAELL 849

Query: 578 REMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
             M      A  L  IFI+S V++ P    P G ++          E  D + + VS A 
Sbjct: 850 TPM------AGELATIFIVSGVKLNPLAQMPEGAMK---------AEDMD-LAVQVSPAP 893

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G+KCERCW Y  +VG   EHPTLC RC +VL
Sbjct: 894 GAKCERCWMYHEEVGHDREHPTLCPRCADVL 924


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2.1|SYI_GEOSW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VVE                               +VA+ L+ ++  + G  ++ + KT
Sbjct: 251 YQVVETNG-------------------------AKYVVAAALLESVAKEIGWDEVTVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE     HP  +R   +VI G+++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 286 IKGKDLEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD+ G  T EA  F GL    + N A+ + L+E  +L+      H YP+DWRTKKPTI
Sbjct: 345 CPVDERGYMTSEAPGFEGL-FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++  R   + AI + KW+P
Sbjct: 404 FRATTQWFASIDKIRGELLQAIKETKWIP 432



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 191/338 (56%), Gaps = 24/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDSILKQVAEVYRKIRNTFRFMLGNLFDFNP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++  ++L  +D+Y + +L ++++N++ +YE+Y F  I+  +  F  VDLS FY D A
Sbjct: 663 ETDAVPVNELREVDRYMIVKLNHLIENVKHAYETYDFASIYHDVNNFCTVDLSAFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY        RRS QTVL   ++++ +++APILPH AE+VW+++P     E+  + +
Sbjct: 723 KDILYIEAPNDRARRSIQTVLYETVVALTKLVAPILPHTAEEVWEHIPNRKEKEE--SVQ 780

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V   +   +DE+        +  W   + LR +V K LEVAR  K+IG SL A V ++ 
Sbjct: 781 LVDMPETINIDEE-----DAIVAKWDAFMNLRDDVLKALEVARNEKVIGKSLTASVTVYP 835

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
                    R++  +    + L+++FI+S+  +     +      P   + L      V 
Sbjct: 836 -----TKEARQLLGSIE--EDLKQLFIVSEFTIADDYEHA-----PEDAQKLA----NVA 879

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V  AEG  CERCW  + +VG   +HPTLC RC  ++
Sbjct: 880 VIVKPAEGETCERCWVVTPEVGKDADHPTLCPRCAHIV 917


>gi|424705584|ref|ZP_18141614.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV63]
 gi|424712418|ref|ZP_18144601.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV65]
 gi|424721629|ref|ZP_18150711.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV72]
 gi|424723708|ref|ZP_18152663.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV73]
 gi|424751826|ref|ZP_18179847.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV93]
 gi|402379008|gb|EJV12829.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV63]
 gi|402380912|gb|EJV14651.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV65]
 gi|402390796|gb|EJV24117.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV72]
 gi|402397417|gb|EJV30435.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV73]
 gi|402405322|gb|EJV37919.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV93]
          Length = 933

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 146 FKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 205

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL+    +    +WTTTPWT+ AN  ++VN    
Sbjct: 206 EYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWTTTPWTLSANLGISVNPDFT 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y  VE+++                     D +K   ++A DL+ T++   G + V + + 
Sbjct: 258 Y--VEVKA---------------------DGRK--FVIAKDLLSTVKEAIGWEEVEVLRE 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G  L+     HP  +R   V++ GD++T ++GTGLVHTAPGHG++DY+ S KY LP++
Sbjct: 293 FSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVI 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD  G FT+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP I
Sbjct: 352 SPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVI 410

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           +RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 411 YRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 187/333 (56%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              + RR  QTV    L+S+ +++ PI+PH AE++W  L            E+V  +++P
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFLQ--------EEEEYVQLAEFP 790

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
                + TF   E  +  W   ++ R  V K LE AR  KLIG SLEAKV ++ ++    
Sbjct: 791 ----GYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIGKSLEAKVTVYPNE---- 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++R++ TA  DAD + ++ I+S  EV     P+  ++             + + I V +
Sbjct: 843 -QIRQLMTAV-DAD-ISQLLIVSDFEVSKEVAPSEAVQF------------EDMAILVEK 887

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC +    VGS  + PTLC RC  ++
Sbjct: 888 AEGETCDRCRSVRQDVGSDEKLPTLCGRCAHIV 920


>gi|431794688|ref|YP_007221593.1| isoleucyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
           P-21439]
 gi|430784914|gb|AGA70197.1| Isoleucyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
           P-21439]
          Length = 922

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 197/329 (59%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVRGDWKNPYLTLEKEYEAAQIGVFGKMARKNYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S +I+  F +        G+L +   +  + +WTTTPWT+PAN A+ ++ + 
Sbjct: 199 IEYAE-KTSDAIFVKFPVKEG----KGILTD--ENTFVIIWTTTPWTLPANLAITLHEEF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  V++++                            IVA  L+ +L + W  +L I+K 
Sbjct: 252 TYVQVQVEN-------------------------EHWIVAEGLLDSLRSTWNLELPIEKR 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R   V+I GD++T E+GTG VHTAPGHG+ED+    +YGLP+L
Sbjct: 287 FVGKELEGVITKHPFIDRDS-VLILGDHVTLEAGTGCVHTAPGHGEEDFNVGKEYGLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +GKFT E G ++G+ V    N  +++ L    +L+ E   +H Y + WR K P I
Sbjct: 346 CPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHEAKIKHSYAHCWRCKNPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+ A+  I  V+W+P
Sbjct: 405 YRATEQWFASIDGFRKEALTEIDHVQWIP 433



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 196/341 (57%), Gaps = 29/341 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q A   GAD+LRLWV S DY  DV   P++++QM++ YRK+R TLR+LL NL+D+  V
Sbjct: 605 PLQVAKDMGADILRLWVCSTDYKNDVAASPRIMKQMTEAYRKIRNTLRFLLSNLNDFDPV 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + ++Y++LP ID++AL QL  ++  + + YE Y+F  ++  +  F  V+LS  Y DV K
Sbjct: 665 KDRVAYEELPEIDRWALLQLGKVIDRVLQGYEKYEFHWVYHTVHNFCAVELSAIYLDVVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RR+ QTVL   L ++VR+IAP+L   A+++W   P+   + +GS  + 
Sbjct: 725 DRLYVEGKDSALRRASQTVLYDVLDALVRLIAPVLTFTADEIW---PYIPAVAEGSNIQ- 780

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
               + P ++ +W    + +   W  +L +R+E  K LE AR  KLI  SL A+V ++  
Sbjct: 781 --TEEMPKVNPRWMDEVLEKK--WDTLLAVRSEATKALEKARQDKLINHSLTARVEIYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPS---TPNGLIRNIPYSGEYLVEGKDK 626
           +A L   L+ +         L  IFI+S+V V  +    P G+          + E  ++
Sbjct: 836 NAELEVFLKAI-------PNLAEIFIVSEVYVHQAGEGKPEGIT---------MAESMEE 879

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + I VS A G KCERCW Y T+VG   +HP LC RC  V++
Sbjct: 880 LGIAVSSAAGEKCERCWIYDTKVGQDQDHPNLCPRCASVVS 920


>gi|330792100|ref|XP_003284128.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
 gi|325085942|gb|EGC39340.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
          Length = 1010

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/352 (42%), Positives = 205/352 (58%), Gaps = 46/352 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   G+  DW NPY T+DP+YE  QI+ F +M  +G IYRG+KPV+WSPSSR+ALAEAE+
Sbjct: 172 FLELGIMGDWKNPYRTMDPQYEVQQIQTFYEMYQKGNIYRGEKPVYWSPSSRSALAEAEI 231

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-------------LAVWTTTPWTV 110
           EY + HVS+SI+  F +     S   L +  L DL                +WTTTPWT+
Sbjct: 232 EYNDAHVSKSIFVKFNVEKFSDS---LKSTVLSDLSSQYFTEENGRKCYALIWTTTPWTI 288

Query: 111 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 170
           P+N A++V+  ++Y +V             ANK           KK   I++ +   +L+
Sbjct: 289 PSNLAISVHPTMEYIIV-----------TNANK-----------KKDHYIISKERFESLK 326

Query: 171 AKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
           A     +L+I K   G  L+     HP  +R  P +I GD++   SGTGLVHTAPGHG E
Sbjct: 327 AILNDPELIIVKEFTGEQLKGTVTRHPQKDRISP-IICGDHVVEGSGTGLVHTAPGHGFE 385

Query: 230 DYVTSLKYGL-----PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIM 283
           D+    +Y       PILSPVD+ G FT +AGK F GL+VL +GN AV+K L ++ +L+ 
Sbjct: 386 DFQVWNEYNNNEVSGPILSPVDESGCFTADAGKEFEGLNVLIEGNQAVIKDLQDKNALLF 445

Query: 284 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 335
            E Y HKYPYDWRTKKP + R T+QWFAS++  ++ A+D I  V  VP   A
Sbjct: 446 IEEYTHKYPYDWRTKKPILIRVTKQWFASLKSIQEKAVDCISNVNMVPASGA 497



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 182/346 (52%), Gaps = 25/346 (7%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
             + P YG D+LR W++S DYT D+ IGP +L ++ +  +K+R + +++LG+  D+    +
Sbjct: 676  NQDPAYGIDILRTWIASSDYTKDISIGPNILVKILENIKKIRNSFKFMLGSNFDFNPATD 735

Query: 392  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            S+ YD + +ID+YAL + + + K++   Y+++QF K+   +  F   + S FYF++ K R
Sbjct: 736  SVPYDQMSLIDKYALHKAQALQKSVTNHYDNFQFQKVLSDVLNF-TGETSAFYFEIIKQR 794

Query: 452  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
            LY     S  R+S QT L   +  I + +API  H +ED+++N    Y        + VF
Sbjct: 795  LYIEKANSQLRKSSQTALFQIVEVINKALAPITIHTSEDIYKN---QYHF--SKPTDSVF 849

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL----- 566
               W VL ++++   + E +    I+ +RT VNKVL+  R    IG S E ++ +     
Sbjct: 850  TQGWTVLPQEYQNDNINEQF--NHIMTVRTLVNKVLQTMRIDGFIGRSDETQLEIKISKE 907

Query: 567  -FTDDASLASRLREMCTAKH-DADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV--- 621
             +   +S+++ L ++ +  +     L+  F   + EV  +  + +  N  YS   L+   
Sbjct: 908  FYNHLSSVSNELNDIFSVSYVKLLLLEDGFDNKESEVTKTQQDNVNDNQQYSLISLLPKD 967

Query: 622  -EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             +   KV I + +++  KC RCW +++      +  TLC  C ++L
Sbjct: 968  SQESGKVEIVIKKSDHFKCPRCWRHTS-----TQKDTLCLPCDKIL 1008


>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|84029568|sp|Q49WX5.1|SYI_STAS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 916

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 200/330 (60%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F ++       G++++   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYQDKR-SPSIYVAFDVIDG----KGIVDD---DAQFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VASDLVPTLEAKWGTKLVI 179
            Y    +                          K +II   +ASD+   L+    T L +
Sbjct: 250 TYGQYNVNG------------------------KKYIIGKDLASDVAEALDWDEDT-LEL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G DLE  +  HP  +R+  +VI G ++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFKGKDLEYIKAQHPFFDRES-LVINGLHVTTDAGTGCVHTAPGHGEDDYIVGQKYNL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SPVDD+G FT+EAG+F G+      N  +   L E  SL+  E   H YP+DWRTKK
Sbjct: 344 PVISPVDDKGVFTDEAGQFEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS++  R+  + AI   ++
Sbjct: 403 PVIFRATPQWFASIDKVREDILSAIDDTQF 432



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 188/338 (55%), Gaps = 31/338 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN+ D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I+  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAIAEKDLLEVDKYLLNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P           E
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIPHV-------EEE 777

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P   E  + F    +  W   ++LR +VN+ LEVAR  K+IG SLEAKV + +
Sbjct: 778 SVHLTNMPERVEIDQAF----VDRWNTFMKLRDDVNRALEVARNEKVIGKSLEAKVVIGS 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           ++   A+   +          LQ++FI SQ EV+    +G+       G+          
Sbjct: 834 NENFDATTFLQQFK------DLQQLFITSQAEVVDKVDDGVAYQ---HGD---------- 874

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I +  A G KCERCWNYS ++GS  E   LC RC  V+
Sbjct: 875 IRIEHAHGEKCERCWNYSEELGSVGELDNLCPRCQAVV 912


>gi|418576427|ref|ZP_13140573.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
 gi|379325489|gb|EHY92621.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
          Length = 916

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 200/330 (60%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F ++       G++++   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYQDKR-SPSIYVAFDVIDG----KGIVDD---DAQFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VASDLVPTLEAKWGTKLVI 179
            Y    +                          K +II   +ASD+   L+    T L +
Sbjct: 250 TYGQYNVNG------------------------KKYIIGKDLASDVAEALDWDEDT-LEL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G DLE  +  HP  +R+  +VI G ++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFKGKDLEYIKAQHPFFDRES-LVINGLHVTTDAGTGCVHTAPGHGEDDYIVGQKYNL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SPVDD+G FT+EAG+F G+      N  +   L E  SL+  E   H YP+DWRTKK
Sbjct: 344 PVISPVDDKGVFTDEAGQFEGM-FYDKANKEITDLLKEDGSLLKLEFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS++  R+  + AI   ++
Sbjct: 403 PVIFRATPQWFASIDKVREDILSAIDDTQF 432



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 187/338 (55%), Gaps = 31/338 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN+ D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I+  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAIAEKDLLEVDKYILNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P           E
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIPHV-------EEE 777

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P   E  + F    +  W   + LR +VN+ LEVAR  K+IG SLEAKV + +
Sbjct: 778 SVHLTNMPERVEIDQAF----VDRWNTFMNLRDDVNRALEVARNEKVIGKSLEAKVVIGS 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           ++   A+   +          LQ++FI SQ EV+    +G+       G+          
Sbjct: 834 NENFDATTFLQQFK------DLQQLFITSQAEVVDKVDDGVAYQ---HGD---------- 874

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I +  A G KCERCWNYS ++GS  E   LC RC  V+
Sbjct: 875 IRIEHAHGEKCERCWNYSEELGSVGELDNLCPRCQAVV 912


>gi|365157070|ref|ZP_09353351.1| isoleucyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
 gi|363625804|gb|EHL76815.1| isoleucyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
          Length = 923

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/328 (45%), Positives = 203/328 (61%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN  ++V+  + 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDG----KGVLDS---DTSIVIWTTTPWTIPANLGISVHPDIN 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV +            +K      +L+D       V+S L      +W    V +KTL
Sbjct: 251 YVVVRVN----------GHKYVVAEALLED-------VSSAL------EWNEPSV-EKTL 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G++LE     HP+  R   V++G +++TT+SGTG VHTAPGHG++D++   KY L +LS
Sbjct: 287 KGTELEYVVAKHPLYGRDSLVMLG-EHVTTDSGTGCVHTAPGHGEDDFLVGKKYNLDVLS 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
            VDD+G  TE+A  F GL    D N A+ K L+E  +L+      H YP+DWRTKKP IF
Sbjct: 346 VVDDKGCMTEDAPGFEGL-FYDDANKAITKKLEEAGALLKLAFITHSYPHDWRTKKPVIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR+  ++A+ +  WVP
Sbjct: 405 RATAQWFASIDAFREQLLEAVKETNWVP 432



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/356 (38%), Positives = 211/356 (59%), Gaps = 27/356 (7%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +    YGAD+LRLWV+SVD+  DV +   +L+Q+S++YR
Sbjct: 586 ALDGEGRKMSKSLGNVV-VPAKVMNQYGADILRLWVASVDFQADVRVSDAILKQVSEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +S+SYD+L  +DQY L +L +++K++ + YE Y++  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFDPKKDSLSYDNLREVDQYILVKLNHLIKSVHDHYEHYEYSAIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F   DLS+FY D AKD LY      + RR+ QTVL   L+S+V++IAPIL H A++
Sbjct: 705 EINNFCTFDLSSFYLDFAKDILYIEPMNFYERRAIQTVLYECLVSLVKLIAPILAHTADE 764

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW+++P       G   E V  +  PV  E   +  + E   W + ++LR +V K LE A
Sbjct: 765 VWEHIP-------GVTEESVQLTDMPVYKEIPNSKELEEK--WDQFMKLRDDVLKALEEA 815

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IG SL A V L+ +D +     + +  + H  + L+++FI+S  EV      G +
Sbjct: 816 RNEKIIGKSLTAHVKLYVNDET-----KVLLDSIH--ENLKQLFIVSGFEVA-----GRL 863

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + P     L    ++  I V +AEG  CERCW  + +VGS  EHPTLC RC +V+
Sbjct: 864 EDAPEHALKL----ERAAIVVEKAEGETCERCWTVTPEVGSDPEHPTLCPRCADVV 915


>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|384159475|ref|YP_005541548.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|384164089|ref|YP_005545468.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
 gi|384168523|ref|YP_005549901.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
 gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
 gi|341827802|gb|AEK89053.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
          Length = 921

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTTTPWTIPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V+++     GD                       +VA++L+ ++    G     +  +
Sbjct: 252 YNVIKV-----GDKR--------------------YVVAAELIESVAQACGFENPEVVAS 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L
Sbjct: 287 YKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD++G  T+EA  F G+      N  + + L+E  +L+  E   H YP+DWRTKKPTI
Sbjct: 346 CPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 405 FRATAQWFASIKDFRSDLLDAIQQTKWVP 433



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 188/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N+++  DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVAVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F    +  L D  
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEEASVQLTDMP 784

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +S+    +EK+  F           +ELR +V K LE AR  K+IG SLEA + 
Sbjct: 785 ETISVPDSQ--ATEEKFDRF-----------MELRNDVLKALETARNEKIIGRSLEASLT 831

Query: 566 LF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+   ++  L S ++E          + ++FI+S++ V   +        P + +    G
Sbjct: 832 LYPNKENRDLLSSIKE---------NIAQLFIVSELTVKDES------EAPETAQSFTTG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K    + V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 877 K----MTVEKAEGQMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|385264667|ref|ZP_10042754.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
 gi|385149163|gb|EIF13100.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
          Length = 923

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 142 FKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  ++V+  L+
Sbjct: 202 EYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTTTPWTMPANLGISVHPDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y V+++     GD                   K +++ A  +    EA       +  + 
Sbjct: 254 YNVIKV-----GD-------------------KRYVVAAELIENVAEACGFENPEVVASY 289

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 290 KGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLC 348

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G  T+EA  F G+      N  + + L+E  +L+  E   H YP+DWRTKKPTIF
Sbjct: 349 PVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIF 407

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 408 RATAQWFASIKDFRSDLLDAIKQTKWVP 435



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 187/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 607 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFNPS 666

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++   +L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 667 VNAVDVKNLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F    +  L D  
Sbjct: 727 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEEASVQLTDMP 786

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +S+    +EK+  F           +ELR +V K LE AR  K+IG SLEA + 
Sbjct: 787 ETIAVPDSQ--ATEEKFDRF-----------MELRNDVLKALETARNEKIIGRSLEASLT 833

Query: 566 LF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+   ++  L S ++E          + ++FI+S++ V   +        P + +    G
Sbjct: 834 LYPNKENRDLLSSIKE---------NIAQLFIVSELTVKDES------EAPENAQSFTTG 878

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K    + V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 879 K----MTVEKAEGQMCERSRVISKDVGANPKYPTLSLRNAEIV 917


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 198/330 (60%), Gaps = 37/330 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FK+ GV  DW+NPYLTLDP++EA QI VFG+M  +GYIY+G KP++WSPSS +ALAEA
Sbjct: 138 ADFKKLGVLGDWDNPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY + H S SIY  F +VS   +               +WTTTPWT+PAN  +AV+  
Sbjct: 198 EIEYHD-HTSPSIYVAFDLVSENGAVE-------KGTKFVIWTTTPWTLPANLGIAVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
            +Y VV+      G+S                      +VA + V  L  K+G       
Sbjct: 250 FEYQVVKYN----GES---------------------YLVAKERVAFLAEKFGWENYETG 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY-VTSLKYGL 239
           + L G DLE     HP  +R   +++  DY+T +SGTGLVHTAPGHG +DY V  L+Y L
Sbjct: 285 EVLVGKDLEYLLCQHPFLDRTSTLIL-ADYVTLDSGTGLVHTAPGHGVDDYLVGQLQYKL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +LSPVD++G  TEEAG+F+G  V  D N  ++ +L E  +L+ +E   H YP+DWR+KK
Sbjct: 344 GVLSPVDNQGVLTEEAGQFAGKFVF-DANKDIIAHLAETGALLKQEDITHSYPHDWRSKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWF SV+ FR   ++A+   K+
Sbjct: 403 PIIFRATPQWFCSVDAFRSELLEAVDNTKF 432



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 181/332 (54%), Gaps = 41/332 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 395
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL++    N    ++Y
Sbjct: 614 GAEIIRLWSASVDYTQDVRISKDILKQVSETYRKIRNTFRFLLGNLYNGSFNNKTDLVAY 673

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           ++L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 ENLEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV-FESK 514
           G  S  R+S  TVL   L   VR++APIL   AE+V+ N+P+    ED  +     F +K
Sbjct: 734 GEDSHKRQSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPY----EDAESVHLTDFPAK 789

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             + D             W K+LE+R +VNK LE +R  K+IG SLEA V ++++DA + 
Sbjct: 790 NVIEDAALEA-------KWDKLLEVRDDVNKALEESRNEKVIGKSLEAAVEVYSNDAEVV 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L  +         L + FI+S+VEV  +        + Y         D   + V++A
Sbjct: 843 ELLNSVA-------NLNQFFIVSKVEVKEND------GVAY---------DLATVKVTKA 880

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG +CERCWN   +V        LC RC  +L
Sbjct: 881 EGHRCERCWNIVDEVN----EEGLCPRCASIL 908


>gi|227529019|ref|ZP_03959068.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351031|gb|EEJ41322.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 931

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/331 (46%), Positives = 206/331 (62%), Gaps = 35/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DWN+PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEAE
Sbjct: 138 DFKRLGVSGDWNHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY   H   +  A F  V       G+L+    D  L VWTTTPWTVPA+ AVAVNAK 
Sbjct: 198 VEY---HDVTAKTAFF--VEQVKDGKGVLDS---DTYLVVWTTTPWTVPASEAVAVNAKF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            Y+VV+           PAN          D +K   +VA++L+  L  K G     + K
Sbjct: 250 DYSVVK-----------PAN----------DDRK--FVVATELLEGLAEKLGWDDYQVVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +AG DLE     HP  +R+  V +  DY+T ++GTGLVHTAPG+G +DY    KY LPI
Sbjct: 287 HVAGKDLEGLTTQHPYLDRELLVGV-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLPI 345

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +P++D+G  T+E G  F G+      ++++ K L++  +L++EEP +H YP+DWRTKKP
Sbjct: 346 FAPINDQGVLTKENGDDFDGVFYQKADDISLQK-LEDNNALLLEEPLKHSYPFDWRTKKP 404

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 405 IIFRATDQWFVSIEKMRQNILDALENVKYHP 435



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 181/339 (53%), Gaps = 31/339 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +     GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+   
Sbjct: 607 PNKVVQQMGAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNAS 666

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++SY+ +  +DQY L +L + ++ +R  +++Y F   ++++  F+  DLS FY +VAK
Sbjct: 667 ENTVSYEYMSSVDQYMLVKLNHFLEKMRADFDNYDFLDAYRLLINFVNNDLSAFYMNVAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     S TRRS QTV    LL++V+++ PILPH  E+VW  +            EF
Sbjct: 727 DVLYIEPENSQTRRSMQTVFYDILLTMVKLLTPILPHTTEEVWSYM--------NEPEEF 778

Query: 510 VFESKWPVLDEKWRTF--PVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  ++ P +    R F    G +  W + + +R+ V K LE AR  K+IG SLEA+V L+
Sbjct: 779 VQLTEIPEV----RHFDGEEGLLDKWSEFMGVRSHVLKSLEEARNAKMIGKSLEAQVDLY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            ++              H+ + L+   + + V++L       + ++  +     +  D +
Sbjct: 835 VNE--------------HNKELLES--LDADVQLLLGVSKLNLHSLDEAAADADQYNDGI 878

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + VS A G  C+RC      VGS   +PTLC+RC +V+
Sbjct: 879 AVKVSVAPGETCQRCRMVKEDVGSDPAYPTLCARCAKVV 917


>gi|375362187|ref|YP_005130226.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
           plantarum CAU B946]
 gi|451347087|ref|YP_007445718.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
 gi|371568181|emb|CCF05031.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
           plantarum CAU B946]
 gi|449850845|gb|AGF27837.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
          Length = 921

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTTTPWTMPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y V+++     GD                   K +++ A  +    EA       +  + 
Sbjct: 252 YNVIKV-----GD-------------------KRYVVAAELIENVAEACGFENPEVVASY 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 288 KGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G  T+EA  F G+      N  + + L+E  +L+  E   H YP+DWRTKKPTIF
Sbjct: 347 PVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 406 RATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 187/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 INAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F    +  L D  
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEEASVQLTDMP 784

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +S+    +EK+  F           +ELR +V K LE AR  K+IG SLEA + 
Sbjct: 785 ETIAVPDSQ--ATEEKFDRF-----------MELRNDVLKALETARNEKIIGRSLEASLT 831

Query: 566 LF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+   ++  L S ++E          + ++FI+S++ V   +        P + +    G
Sbjct: 832 LYPNKENRDLLSSIKE---------NIAQLFIVSELTVKDES------EAPENAQSFTTG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K    + V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 877 K----MTVEKAEGQMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|394993880|ref|ZP_10386619.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
 gi|393805204|gb|EJD66584.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
          Length = 921

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTTTPWTMPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y V+++     GD                   K +++ A  +    EA       +  + 
Sbjct: 252 YNVIKV-----GD-------------------KRYVVAAELIENVAEACGFENPEVVASY 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 288 KGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G  T+EA  F G+      N  + + L+E  +L+  E   H YP+DWRTKKPTIF
Sbjct: 347 PVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 406 RATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 187/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFNPS 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F    +  L D  
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEEASVQLTDMP 784

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +S+    +EK+  F           +ELR +V K LE AR  K+IG SLEA + 
Sbjct: 785 ETIAVPDSQ--ATEEKFDRF-----------MELRNDVLKALETARNEKIIGRSLEASLT 831

Query: 566 LF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+   ++  L S ++E          + ++FI+S++ V   +        P + +    G
Sbjct: 832 LYPNKENRDLLSSIKE---------NIAQLFIVSELTVRDES------EAPENAQSFTTG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K    + V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 877 K----MTVEKAEGQMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|421731788|ref|ZP_16170911.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
 gi|407074001|gb|EKE46991.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
          Length = 921

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L          +WTTTPWT+PAN  ++V+  L+
Sbjct: 200 EYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTTTPWTMPANLGISVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y V+++     GD                   K +++ A  +    EA       +  + 
Sbjct: 252 YNVIKV-----GD-------------------KRYVVAAELIENVAEACGFENPEVVASY 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP+  R   V++ GD++TT++GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 288 KGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLEVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD++G  T+EA  F G+      N  + + L+E  +L+  E   H YP+DWRTKKPTIF
Sbjct: 347 PVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLEFITHSYPHDWRTKKPTIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 406 RATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 187/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGS 505
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F    +  L D  
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSFVEEASVQLTDMP 784

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V +S+    +EK+  F           +ELR +V K LE AR  K+IG SLEA + 
Sbjct: 785 ETIAVPDSQ--ATEEKFDRF-----------MELRNDVLKALETARNEKIIGRSLEASLT 831

Query: 566 LF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+   ++  L S ++E          + ++FI+S++ V   +        P + +    G
Sbjct: 832 LYPNKENRDLLSSIKE---------NIAQLFIVSELTVKDES------EAPENAQSFTTG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K    + V +AEG  CER    S  VG+  ++PTL  R  E++
Sbjct: 877 K----MTVEKAEGQMCERSRVISKDVGANPKYPTLSLRNAEIV 915


>gi|196247714|ref|ZP_03146416.1| isoleucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196212498|gb|EDY07255.1| isoleucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 542

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 201/331 (60%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE
Sbjct: 138 QFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G       D  + +WTTTPWT+PAN A+AV+  L
Sbjct: 198 IEYKDKR-SPSIYVAFPVKDGKGVLQG-------DERIVIWTTTPWTIPANLAIAVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y +VE            AN +               +VA+ L  ++  E  W    V+ 
Sbjct: 250 DYYIVE------------ANGQK-------------YVVAAALAESVAKEVGWEAWSVV- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP
Sbjct: 284 KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD+ G  TEEA  F+G+    + N A+ + L+E  +L+      H YP+DWRTK+P
Sbjct: 343 VLCPVDERGYMTEEAPGFAGM-FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKQP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++  R   +DAI + KWVP
Sbjct: 402 TIFRATTQWFASIDKIRDQLLDAIKETKWVP 432


>gi|392971790|ref|ZP_10337183.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
 gi|403046885|ref|ZP_10902354.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
 gi|392510329|emb|CCI60473.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
 gi|402763581|gb|EJX17674.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
          Length = 916

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 198/325 (60%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVKGDFDNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYQDKR-SASIYVAFDVKDG----KGVVD---SDAKFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VASDLVPTLEAKWGTKLVI 179
            Y    +                          K +II   +ASD+V  L     T L +
Sbjct: 250 TYGQYNVNG------------------------KKYIIGKDLASDVVEALGWDENT-LEL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   GS+LE     HP  +R   +VI G ++TT++GTG VHTAPGHG++DYV   KY L
Sbjct: 285 EKEFKGSELEYVETQHPFVDR-VSLVINGLHVTTDAGTGCVHTAPGHGEDDYVVGQKYKL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SPVDD+G FTEEAG+F G+      N A+   L E+ +L+  E   H YP+DWRTKK
Sbjct: 344 PVISPVDDKGVFTEEAGQFEGM-FYDKANKAITDVLKEKDALLNLEFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS++  RQ  +DAI
Sbjct: 403 PVIFRATPQWFASIDKVRQDILDAI 427



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/355 (38%), Positives = 201/355 (56%), Gaps = 32/355 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    ++G V  VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK
Sbjct: 589 MDGSGKKMSKSLGNV-IVPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQTSDVYRK 647

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R TLR++LGN++D+    ++++  DL  +D+Y L +L     N  + Y++Y +  I+Q 
Sbjct: 648 IRNTLRFMLGNVNDYNPATDALAEADLLEVDKYLLNRLREFTANTLDHYDNYDYLDIYQE 707

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +Q FI V+LSNFY D  KD LY     S  RRS QTVL   ++ + +++APIL H AE+V
Sbjct: 708 VQNFINVELSNFYLDYGKDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEV 767

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           W ++P           E +  ++ P   E  R F    +  W   ++LR +VN+ LEVAR
Sbjct: 768 WSHIPHV-------EEESIHLTRMPERAEVDREF----LDRWNTFMDLRDDVNRALEVAR 816

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K+IG SLEAKV + ++D   A+   +  +       LQ++FI SQ EV+ S  NG+  
Sbjct: 817 GEKVIGKSLEAKVVIGSNDNFDATSFLQQFS------DLQQLFITSQAEVVESVENGVAY 870

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                G+          I +  A G KC+RCWNYS ++GS  E   LC RC EV+
Sbjct: 871 QY---GD----------IRIEHAHGEKCQRCWNYSEELGSVGELEDLCPRCQEVV 912


>gi|66800699|ref|XP_629275.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996458|sp|Q54CE4.1|SYIM_DICDI RecName: Full=Probable isoleucine--tRNA ligase, mitochondrial;
           AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS;
           Flags: Precursor
 gi|60462665|gb|EAL60867.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1034

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/339 (43%), Positives = 201/339 (59%), Gaps = 30/339 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+  G+  DW NPY TLD  YE  QI+ F  M  +GYIYRG KPVHWSPSSRTALA+AEL
Sbjct: 176 FQEMGILGDWENPYKTLDYGYEVEQIQTFYDMFNKGYIYRGVKPVHWSPSSRTALADAEL 235

Query: 64  EYPEGHVSRSIYAVFRMVSAP-------PSTSGLLNEFLPDLGLAVWTTTPWTVPANAAV 116
           EY   H S+SI+  F + S         P+TS  +N+    +   +WTTTPWT+PAN A+
Sbjct: 236 EYNNNHTSKSIFVKFNVKSLSNHILNNLPTTSD-INKAEMVISAIIWTTTPWTIPANQAI 294

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 176
            VN+++ Y +V                  +P    + + ++FII    L    ++    +
Sbjct: 295 CVNSEMDYILV------------------KPIESEQYRNEMFIISKERLESLTKSFNIGE 336

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY-VTSL 235
           L +     G  L+     HP  +R+ P +I GD++   SGTGLVHTAPGHG ED+ +   
Sbjct: 337 LKVILEFKGEQLKGTITKHPQYDRESP-IITGDHVIEGSGTGLVHTAPGHGVEDFQICQQ 395

Query: 236 KY-GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +Y  L +LSPV+D G FT+E G KF GL+VLGDGN AV+  L+   SL+ +E Y HKYPY
Sbjct: 396 QYPDLKVLSPVNDLGCFTDEVGEKFVGLEVLGDGNEAVINDLETIGSLLHKEDYIHKYPY 455

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           DWRTKKP I R T QWF  ++  ++ A+ +I +V  VPP
Sbjct: 456 DWRTKKPIIIRTTLQWFVGLKNIQKTALQSIERVNMVPP 494



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 170/366 (46%), Gaps = 46/366 (12%)

Query: 334  EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNS 392
            + P YG D+LR WV+S DY+ D+ IGP +L ++ D  +K+R TLR++L +  D+    ++
Sbjct: 678  QNPPYGVDLLRTWVASSDYSKDISIGPNILIKILDGIKKIRNTLRFMLASNFDFDPTIHA 737

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            I Y+ L  +D+YAL ++  + +++   Y+ +QF K+   I  F I ++S+FYFDV K  L
Sbjct: 738  IPYEKLSSLDKYALHRVFKLQESVTRHYDQFQFQKVHTEIINFSI-EISSFYFDVIKRHL 796

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV----WQNLPFAYTLEDGSAAE 508
            Y     S +RRS QTVL   L  I   +API  H +EDV    +Q       L+      
Sbjct: 797  YAESPNSHSRRSTQTVLFKMLDVINIALAPITVHTSEDVFLHQYQFKNNGKGLDKNLIEN 856

Query: 509  FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
             VF   W  L  ++    +   +    I+ +R  VN+VL+  R+  +IG S E  + L  
Sbjct: 857  SVFAHGWDQLPSQYENELISNQF--TNIIAIRDVVNRVLQSMRSQGIIGRSDETIMELTV 914

Query: 569  DDASLASRLREMCTAKHDADTLQRIFIISQV----------------------------E 600
             +   +     +       D    IF +S V                            +
Sbjct: 915  TNEESSPFYDNLFAINSQLDD---IFCVSNVLLKKFNTFEKDVEQQQQQQQQQQQQQPQQ 971

Query: 601  VLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCS 660
            + P++    I N   S      G+ +V + +S  +  KC RCW +++     +E+  +C 
Sbjct: 972  IEPNSKGEFIFNTIISNNSKQLGRIEVLLKIS--DKFKCPRCWRHTS-----IENDKVCK 1024

Query: 661  RCYEVL 666
             C  VL
Sbjct: 1025 PCDSVL 1030


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 203/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+ PY+TL+P YEA QI+VFG+M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 180 FKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEI 239

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 240 EYNDKK-SASIYVAFPVKDGKDVLEG-------DEKFIIWTTTPWTLPANLGISVHPELE 291

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 292 YSIVKVN----------------------DEK---YIIASELFDTVSKTLEWENAEVV-K 325

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ G+++TT++GTG VHTAPGHG++D++   +YGL +
Sbjct: 326 TVKGSELEYTVAKHPFYERDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEV 384

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 385 LCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 443

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 444 IFRATAQWFASIEAFRKELLQAVEETKWVP 473



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 628 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 686

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 687 IRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 746

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 747 IHNFCTIDLSSFYLDFAKDILYIEAENHHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 806

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 807 WPYVPGVVEESVQLTDMPEAVEVEGAEALKTKWDAF-----------MTLRDDVLKALEV 855

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+       + +++M  +   ++ L+++FI+S+ ++      G 
Sbjct: 856 ARNEKVIGKSLNASITLYP-----TAEMKQMLESI--SEDLKQLFIVSEYKL-----GGT 903

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 904 MEEAPAGAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 956


>gi|406669223|ref|ZP_11076503.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
 gi|405584020|gb|EKB57946.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
          Length = 927

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 206/335 (61%), Gaps = 41/335 (12%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW++PYLTL PEYEA Q+ VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 138 ADFKRLGVTGDWDHPYLTLTPEYEAQQLRVFGKMAERGYIYKGLKPIYWSPSSESSLAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVWTTTPWTVPANAAVAVNA 120
           E+EY +   S SIY  F      P  SG  +  +PD     +WTTTPWT+PAN  ++V  
Sbjct: 198 EIEYKDVK-SPSIYVAF------PVRSG--SGVVPDHAEFVIWTTTPWTLPANLGISVLG 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLV 178
           +  Y  VE+ +                        ++F IVA DL+ T+  E  W    V
Sbjct: 249 EATYVAVEVGT------------------------RIF-IVAKDLLETIANEIGWENYQV 283

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           +K+   G++ +  +  HP  +R   V++ GD++T ESGTGLVHTAPGHG++D++   +YG
Sbjct: 284 VKE-YQGAEFDRLKVKHPFYDRDSLVMV-GDHVTLESGTGLVHTAPGHGEDDFIIGQRYG 341

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +LSPVD+ G FT+EA  F G+  L  G   V+K ++E  +L+     EH YP+DWRTK
Sbjct: 342 LEVLSPVDNRGHFTDEAPGFEGMFYLK-GQKEVLKIIEENGTLLYLSEIEHSYPHDWRTK 400

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
           +P IFRAT QWFAS++ FR   +DA+  +V W  P
Sbjct: 401 QPVIFRATPQWFASIDKFRDQLLDAVENEVTWYHP 435



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 184/360 (51%), Gaps = 36/360 (10%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           ++G  Q    +IG V  + P+E     GAD++RLWVSSVDY  DV I   +L Q+++ YR
Sbjct: 589 MDGKGQKMSKSIGNV--ITPEEITQDLGADIIRLWVSSVDYENDVRISRDILNQVAEAYR 646

Query: 372 KLRGTLRYLLGNLH-DWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           K+R T R++L N+  D+    + +  +++  +D+Y + Q   +V ++ E+Y  Y+F +++
Sbjct: 647 KIRNTFRFILSNIEADFDPAVDCVQEEEMEPVDRYMMSQYRLLVHDMHEAYTHYEFNRVY 706

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           + +  F+ VDLS FY D+AKD +Y     +  RRS QTV    L  + R++ PIL H  E
Sbjct: 707 KRLINFVTVDLSAFYSDIAKDIVYIEQMNNRKRRSIQTVFYEILSGLTRMLTPILLHTME 766

Query: 490 DVWQNLPFAYT-LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           ++WQ +P A   ++      FV       L ++W TF            +++  V+K  E
Sbjct: 767 EIWQFIPGAENYIQLQEMPHFVNVDADQELVDQWETF-----------FKVKEGVDKAKE 815

Query: 549 VARTGKL--IGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
           +A+  +   +    EAKV L+  D  LA  L +       ++ L ++ I+S++++ P + 
Sbjct: 816 LAKDDEHAPVKKGFEAKVTLYC-DTDLAQALAQY------SEHLDQLLIVSELDIQPFSE 868

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                      +      D   + V  A+G  C+RC     +VG+    P  C RCY+++
Sbjct: 869 R----------DTSAVDFDDFAVKVEPAKGHICDRCRAVRPEVGTIEAAPEFCQRCYDIV 918


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 203/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+ PY+TL+P YEA QI+VFG+M+ +GYIY+G+KPV+WSP+S +ALAEAE+
Sbjct: 180 FKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAKKGYIYKGQKPVYWSPTSESALAEAEI 239

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D    +WTTTPWT+PAN  ++V+ +L+
Sbjct: 240 EYNDKK-SASIYVAFPVKDGKDVLEG-------DEKFIIWTTTPWTLPANLGISVHPELE 291

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y++V++                       D+K    I+AS+L  T+    +W    V+ K
Sbjct: 292 YSIVKVN----------------------DEK---YIIASELFDTVSKTLEWENAEVV-K 325

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP   R   V++ G+++TT++GTG VHTAPGHG++D++   +YGL +
Sbjct: 326 TVKGSELEYTVAKHPFYERDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFLVGKQYGLEV 384

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKKP 
Sbjct: 385 LCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFITHSYPHDWRTKKPI 443

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 444 IFRATAQWFASIEAFRKELLQAVEETKWVP 473



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 194/357 (54%), Gaps = 31/357 (8%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 628 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 686

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T R+LLGNL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 687 IRNTFRFLLGNLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 746

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  +DLS+FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 747 IHNFCTIDLSSFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEV 806

Query: 492 WQNLP--FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           W  +P     +++     E V       L  KW  F           + LR +V K LEV
Sbjct: 807 WPYVPGVVEESVQLTDMPEAVEVEGAEALKTKWDAF-----------MTLRDDVLKALEV 855

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+       + +++M  +   ++ L+++FI+S+ ++      G 
Sbjct: 856 ARNEKVIGKSLNASITLYP-----TAEMKQMLESI--SEDLKQLFIVSEYKL-----GGT 903

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +   P          +   + V++A G  CERCW  S  +G   EH TLC RC  V+
Sbjct: 904 MEEAPAGAPKY----EHTAVVVAQATGETCERCWVVSETIGKDAEHETLCERCATVV 956


>gi|448237304|ref|YP_007401362.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
 gi|445206146|gb|AGE21611.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
          Length = 924

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 198/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F + +      G       D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKNGKGVLEG-------DERIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV++       +AA A   ++                       E  W    V+ KT+
Sbjct: 251 YHVVDVSGKRYVVAAALAESVAK-----------------------EIGWDAWSVV-KTV 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+L 
Sbjct: 287 KGKELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+      H YP+DWRTK+PTIF
Sbjct: 346 PVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++  R   + AI + KW+P
Sbjct: 405 RATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 190/342 (55%), Gaps = 31/342 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+ Y F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDRYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDG 504
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P       +++  
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIPNRRENVESIQLT 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
              E +       L  KW  F           +++R ++ K LE AR  K+IG SL A V
Sbjct: 783 DMPEPIAIDGEEALLSKWDAF-----------MDVRDDMLKALENARNEKVIGKSLTASV 831

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++  D +     R++  A  DAD L+++ I+S   V     +      P   E L    
Sbjct: 832 TVYPKDEA-----RKLL-ASLDAD-LRQLLIVSAFSVADEPYDA----APAEAERL---- 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V + V  AEG  CERCW  + +VG+   HPTLC RC  ++
Sbjct: 877 EHVAVLVRPAEGETCERCWTVTKEVGADPSHPTLCPRCAHIV 918


>gi|404329201|ref|ZP_10969649.1| isoleucyl-tRNA ligase [Sporolactobacillus vineae DSM 21990 = SL153]
          Length = 927

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 200/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PYLTL+ E+EA QIEVFG M+ +GYIY+ KK V+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDHPYLTLNKEFEAEQIEVFGTMARKGYIYKDKKTVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F +        G+LN    D  + +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVK-SYSIFVSFHVTDG----KGVLNN---DEEVVIWTTTPWTMPANLAICVNPKFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y+VVE              +K               +VA++LV  L     W     + +
Sbjct: 251 YSVVET-----------GGRK--------------FVVATELVDKLTKTLNWENPKTL-R 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G  LE     HP  NR   ++I GD++T ++GTG VHTAPG G++D+    KYGL I
Sbjct: 285 TFNGKALEGVVCRHPFYNRDS-LMILGDHVTLDAGTGCVHTAPGFGEDDFNVGKKYGLDI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+GK T+EA  F G+    D N  V++ L+E  +L+ +  + H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGKMTDEAPGFEGM-FYSDANEPVIQKLEEVHALLKKGTFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT+QWFAS++ FR   + AI +VKW+P
Sbjct: 403 IWRATKQWFASIKAFRPEILKAIHEVKWIP 432



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 192/331 (58%), Gaps = 28/331 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD++RLWV+SVDY  D  +   +L Q++++YRK+R T+R++LGNLHD+    N++  +
Sbjct: 611 FGADIIRLWVASVDYQADARVSNDILAQVAEVYRKIRNTVRFMLGNLHDFNEKDNAVPVE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            LP +D+Y L +L  ++K  R+ YE YQF  +++ +Q +   DLS FY D+ KD LY   
Sbjct: 671 KLPELDKYMLLRLNELIKTCRDGYEEYQFQTVYKALQNYCTTDLSAFYMDIVKDALYVQP 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE-SKW 515
             S  RRS QTVL   ++++ ++++P++PH AE++WQ +P A    +      + E S  
Sbjct: 731 KDSLVRRSAQTVLFRTVVAMTKLLSPVIPHTAEEIWQYIPGAKDQSEYVQLTDMPEPSDI 790

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P  DE  +         W ++L +R +V K LE AR  K IGSSLEA V ++   ++  S
Sbjct: 791 PGADELKQK--------WTQVLAVRDDVLKSLEKARDAKQIGSSLEAAVTVYPTKSN--S 840

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L+       D   L ++FI+SQV V   T      ++P + +     KD V+  V  AE
Sbjct: 841 WLK-------DQPALDKLFIVSQVTVADGTA-----SVPDAADRYT--KDAVF--VKEAE 884

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G KCERCW+    VG   EHPTLC+ C E +
Sbjct: 885 GKKCERCWSVLPSVGEDAEHPTLCAHCCETV 915


>gi|403383412|ref|ZP_10925469.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC30]
          Length = 926

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 203/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL P +EA QI VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRIGVRGDWENPYITLRPAFEARQIGVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+LN    D  + +WTTTPWT+PAN  ++VN + Q
Sbjct: 200 EYKDIK-SPSIYVAFKVADG----KGVLNN---DEEIVIWTTTPWTLPANLGISVNPEFQ 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV++           A++K               +VA +L+ T+  K G + V I + 
Sbjct: 252 YVVVKV-----------ADRK--------------FVVAKELLNTVAEKIGWEDVQIDRE 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP+ +R   V++ GD++T E+GTG VHTAPGHG++DY    +YGL IL
Sbjct: 287 VGGAELENITAKHPLFDRTSLVML-GDHVTLEAGTGCVHTAPGHGEDDYQVGKRYGLEIL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           S VD+ G  T+ AG+F+G       N  + + L+E  +L+    +EH YP+DWRTKKP I
Sbjct: 346 SVVDNRGILTDAAGEFAG-QFYDKANKPICEKLEELGALLSLTFFEHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + AI    + P
Sbjct: 405 FRATPQWFASIDKFRPELLQAIRDTNFTP 433



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/337 (36%), Positives = 192/337 (56%), Gaps = 27/337 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 389
           P +    YGAD+LR+WV+SVDYT DV I   +L+Q+S++YRK+R TL+++ GNLHD+ V 
Sbjct: 604 PAKIMQQYGADILRMWVASVDYTADVRISMDMLKQVSEMYRKVRNTLKFVHGNLHDFNVE 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y+DL  +DQY   +L+ ++K +R +Y+ Y+F  +++ +  FI  +LS+FY D+AK
Sbjct: 664 TDYVQYEDLREVDQYMYMELQKLIKTVRAAYDKYEFATVYKAVNNFIATELSSFYLDIAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  RR+ Q+V+   L ++V+++API+PH A++++  +         + AE 
Sbjct: 724 DVVYVEAPNSHARRAMQSVMHDTLDALVKLLAPIIPHTADEMYGYMA-------DTTAES 776

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  +  P   EK     + E   W KI+ +R  V K LE +RT KLIG SLEA+  ++ D
Sbjct: 777 VQLTDMPDAVEKENFAALTEK--WAKIMAVRDVVLKSLEESRTAKLIGKSLEARATVYAD 834

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           D + A        A    D  Q + I+S+  VL    N     +           + V +
Sbjct: 835 DVTKA------VLADESIDFAQ-LMIVSEF-VLDDLANATDDCVK---------TETVAV 877

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V++AEG KC+RCW     VG+   HP LC RC  V+
Sbjct: 878 AVAKAEGEKCDRCWTIDKTVGTHEAHPGLCERCATVV 914


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium succinatutens YIT
           12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium succinatutens YIT
           12067]
          Length = 929

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/336 (45%), Positives = 196/336 (58%), Gaps = 41/336 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL   +EA QI VFG M+ +GYIY+GKK V+W P   TALAEAE+
Sbjct: 140 FKRLGVLGDWENPYITLHHSFEAEQIRVFGTMANKGYIYKGKKTVYWCPHCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVS----APPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           EY E   + +I+    +V      P +  G          + +WTTTPWT+PAN AVA+N
Sbjct: 200 EYGE-QKTPTIFVKMPLVKDNGQTPEAAKG------KKAYMVIWTTTPWTMPANVAVALN 252

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
             L+YA VE +                 G VL   K +   V +     L    GT L  
Sbjct: 253 PALEYAWVECE-----------------GEVLFMAKDLLAQVGAVCHKDLSNILGTTL-- 293

Query: 180 KKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
                G D+E    VHP    +NR+  VV+  DY+TTE+GTG VHTAPGHG  D+ T LK
Sbjct: 294 -----GKDMEFAECVHPFPEYNNRRSLVVM-ADYVTTEAGTGCVHTAPGHGDVDFETGLK 347

Query: 237 YGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           Y LPIL PVD +GK TEEAG +F G+ V  D N+ V+KYL E   L+ +E  +H+Y + W
Sbjct: 348 YKLPILCPVDSQGKLTEEAGERFKGMFVF-DANIPVLKYLAELNCLLGKENIKHQYAHCW 406

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRAT QWFAS++GFR  A+ +I  V+W+P
Sbjct: 407 RCKNPIIFRATSQWFASIDGFRDEALKSIDDVQWIP 442



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/351 (35%), Positives = 197/351 (56%), Gaps = 26/351 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    ++G V  VP      YGAD++RLW +S DY  D+ I P++L+Q++++YRK
Sbjct: 598 VDGDGRKMSKSVGNVI-VPQDVIKQYGADIIRLWTASSDYKADIRISPKILKQLAEVYRK 656

Query: 373 LRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T+RY+LGN +D+    +++ ++++  +DQ+AL  L+ + K +  +YESY F  ++  
Sbjct: 657 IRNTIRYILGNTNDFNYETDAVPFNEMLELDQWALMHLQLLKKEVTAAYESYDFHVLYHA 716

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           I  F  V++S+FY D+ KDRLY     S  RRS QT +   L+ ++ +++P+L    E+V
Sbjct: 717 IHNFCTVEMSSFYLDILKDRLYAYKADSKERRSAQTAMHEILMDLIVMLSPVLSFTMEEV 776

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           WQ     +  +  +A E V    WP + E++    +     W   +E+R+E+ KVLE+AR
Sbjct: 777 WQ-----FMKKSANAPESVQMLPWPEVKEEYINEELETK--WDNFIEIRSEITKVLELAR 829

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
             K IG SL+AKV L  +  +LA         K     L  + I+SQ  ++     G   
Sbjct: 830 RNKQIGHSLDAKVELHAEGEALA-------ILKSVEKDLATLLIVSQAIIVEGAAEGA-- 880

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                      G++ + + V+ AEG KCERCW YS +VG   EHPTLC RC
Sbjct: 881 --------EATGREDLKVTVAAAEGHKCERCWIYSDEVGQDAEHPTLCKRC 923


>gi|333978630|ref|YP_004516575.1| isoleucyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333822111|gb|AEG14774.1| Isoleucyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 931

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 192/329 (58%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLTL P YEAAQI VFG+M+ +GYIY+G KPV+W  +  TALAEAE+
Sbjct: 140 FKRLGVRGDWEHPYLTLMPHYEAAQIGVFGEMARRGYIYKGLKPVYWCATCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G          + +WTTTPWT+ AN AV ++    
Sbjct: 200 EY-QDKKSPSIYVRF------PVKDGK-GRLPAGSQVVIWTTTPWTLIANVAVCLHPDFT 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +V       G+                       +VA +L+P+     G     IK+ 
Sbjct: 252 YVLVA-----SGEEE--------------------YVVAKELLPSFARAVGLNDWTIKEE 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AGSDLE     HP   R   +VI GD++T ++GTG VHTAPGHG EDY+   +YGLPIL
Sbjct: 287 FAGSDLEGVVLGHPFIERDS-LVILGDHVTLDAGTGCVHTAPGHGHEDYLVGQRYGLPIL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+D  G+FT EAG+F+G     D N  ++  L  +  L+  +   H+YP+ WR KKP  
Sbjct: 346 SPIDGRGRFTGEAGQFAG-QFYTDANEGIIAELRARGKLLKSDTINHQYPHCWRCKKPVF 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS+EGFRQ A++AI QV+W+P
Sbjct: 405 FRATEQWFASIEGFRQKALEAIRQVRWIP 433



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 189/330 (57%), Gaps = 25/330 (7%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+  G+ + YD L
Sbjct: 617 GADILRLWVSSADYRGDLAVSQNILKQMTEAYRKIRNTCRFLLGNLYDFGPGDQVPYDRL 676

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
           P +D++AL +L  +++ +  +Y  Y++  +F  I  F  +D+S  Y D+ KDRLYT    
Sbjct: 677 PEMDRWALLRLHRMMERVLAAYRDYEYHVVFHTIHHFCTIDMSALYLDMIKDRLYTTPAK 736

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S  RR+ QTVL   L ++VR++APIL    E++W+  P     ++  A   V  +  P +
Sbjct: 737 SPERRAAQTVLYQVLHALVRLLAPILAFTTEEIWRYAP-----KEKEAPVSVQLTDMPQV 791

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA--SLASR 576
           +E +    V     W ++L +R EV + LE AR  KLIG+SLEA V L+  +      SR
Sbjct: 792 NEDY--LDVELEAKWERLLGVRGEVTRALEAARREKLIGNSLEAAVVLYAREEMYDFLSR 849

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           ++++ T          IFI+S VE+   T      ++P     + E    + I V +A G
Sbjct: 850 VQDLPT----------IFIVSAVELKKWTG-----DLPEKA-VVSETIPGLAIVVEKAPG 893

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCW Y   VG   EHPTLC RC  VL
Sbjct: 894 EKCERCWMYHPGVGQDQEHPTLCPRCVRVL 923


>gi|381209823|ref|ZP_09916894.1| isoleucyl-tRNA synthetase [Lentibacillus sp. Grbi]
          Length = 919

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 205/330 (62%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK++GV  DW+NPY+TL  +YEAAQI+VFG+M+ +GYIYRG KPV+WSPSS +ALAEAE+
Sbjct: 140 FKKFGVRGDWDNPYITLTKDYEAAQIKVFGEMAKKGYIYRGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN  +AV+ +L+
Sbjct: 200 EYHDKR-SPSIYVAFDVTDG----KGVLD---GDEKIIIWTTTPWTIPANLGIAVHPELE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           YAVV +     G+                       ++A +L+ T+  E  W    VI K
Sbjct: 252 YAVVGVN----GEK---------------------YVIAYELLETMTEELDWENPEVI-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G + +     HP  +R   V++ G+++TT++GTG VHTAPGHG++D+  S +YG+  
Sbjct: 286 TFKGEEADKVVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFYMSREYGIEP 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVD +G FT EA  F+G +     N ++ + LDE  +L+      H YP+DWRTKKPT
Sbjct: 345 LSPVDYQGYFTNEAPGFAG-EFYDKANKSITEKLDETGALLKLTFITHSYPHDWRTKKPT 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FRQ  +D I ++ W P
Sbjct: 404 IFRATSQWFASIKDFRQDILDEINRINWYP 433



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/338 (35%), Positives = 188/338 (55%), Gaps = 47/338 (13%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           G D+LRLWVSSVDY  DV I  ++L+Q+S+ YRK+R T+R++LGNL D+    +++   +
Sbjct: 613 GIDILRLWVSSVDYQADVRISQEILKQISEAYRKIRNTVRFMLGNLADFDPAKDAVPEAE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D+Y L +L+N+VKN+R++Y+ Y++  I+  I  F  +DLS+FY D AKD LY    
Sbjct: 673 MEEVDRYMLHRLQNLVKNVRDNYDIYEYSPIYSQIHNFCAIDLSSFYLDFAKDILYIEAA 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP- 516
            +  RRS QT     + ++V+++ PI+PH  +++W+ +P       G   E V  +  P 
Sbjct: 733 DNHHRRSIQTAYYEIVTTLVKLLTPIIPHTTDEMWEYIP-------GVEEESVQLTDIPE 785

Query: 517 --------VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
                    LDEKW  F           +++R +V K LE AR  K+IG SLEAK+ +  
Sbjct: 786 PREITGFGRLDEKWDHF-----------MDIRDDVLKALEEAREDKVIGKSLEAKITVVP 834

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            D    S+ +E+     D   + ++FI+S+ +V    P+        + EY       V 
Sbjct: 835 KD----SKTKEVLNGISD---VHQLFIVSEADVTEDAPDD-------AKEYRY-----VN 875

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V +  G  C RCW  S  VGS  +HP LCSRC +++
Sbjct: 876 VKVEKHPGDTCARCWTASETVGSDHDHPDLCSRCADIV 913


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9.1|SYI_GEOKA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 198/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F + +      G       D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKNGKGVLEG-------DERIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV++       +AA A   ++                       E  W    V+ KT+
Sbjct: 251 YHVVDVSGKRYVVAAALAESVAK-----------------------EIGWDAWSVV-KTV 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+L 
Sbjct: 287 KGKELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+      H YP+DWRTK+PTIF
Sbjct: 346 PVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++  R   + AI + KW+P
Sbjct: 405 RATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 193/341 (56%), Gaps = 29/341 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E+  + +
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRRENVESVQ 780

Query: 509 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
                +   +D        GE   +  W   +++R ++ K LE AR  K+IG SL A V 
Sbjct: 781 LTDMPEPIAID--------GEEALLAKWDAFMDVRDDIFKALENARNEKVIGKSLTASVI 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  D +     R++  A  DAD L+++ I+S   +     +      P   E L    D
Sbjct: 833 VYPKDEA-----RKLL-ASLDAD-LRQLLIVSAFSIADEPYDA----APAEAERL----D 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + V  AEG  CERCW  + +VG+   HPTLC RC  ++
Sbjct: 878 HVAVIVRPAEGETCERCWTVTKEVGADPSHPTLCPRCAHIV 918


>gi|334341797|ref|YP_004546777.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
 gi|334093151|gb|AEG61491.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
          Length = 931

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 200/330 (60%), Gaps = 36/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  DW  PY TL P+YEA Q+ VFG+M+ +GYIY+G KPV+W  S  TALAEAE
Sbjct: 140 EFQRLGVRGDWERPYYTLLPQYEATQVRVFGEMAKKGYIYKGLKPVYWCASCETALAEAE 199

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+L E   D  + +WTTTPWT+PAN A++V+ + 
Sbjct: 200 VEYGD-KTSPSIYVKFPVKEG----KGILPE---DAAVVIWTTTPWTLPANVAISVHPEF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EAKWGTKLVIKK 181
           +Y +  +                      K QK   ++VA +L+    E     +  I  
Sbjct: 252 EYVLARV----------------------KGQK---VVVAKELLEAFKEVMEAEEAEILA 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G  L+     HP  +R   +VI G+++T ++GTG VHTAPGHG+ED++ + +YGLP+
Sbjct: 287 TFKGEQLDRVVCRHPFVDRDS-LVILGEHVTLDAGTGCVHTAPGHGEEDFLAAKQYGLPV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D+ GKFT E GKF G  +L D N +V++ L EQ +L+     +H+YP+ WR K+P 
Sbjct: 346 LSPLDNRGKFTAEGGKFQGQFIL-DANKSVIEELQEQGALLGLGNIKHQYPHCWRCKQPV 404

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            FRATEQWFASVEGFR+  + AI  +KWVP
Sbjct: 405 FFRATEQWFASVEGFRRETLQAIRNIKWVP 434



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/329 (37%), Positives = 188/329 (57%), Gaps = 23/329 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + ++Y D
Sbjct: 619 GADILRLWVSSADYRGDLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVAYRD 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           LP +D+ AL +L  ++K +  +YE Y+F  ++  I  + ++DLS FY D+ KDRLYT   
Sbjct: 679 LPELDRVALMELNKLIKRVLAAYEDYEFHVVYHAIHNYCVLDLSAFYLDIIKDRLYTAVP 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L ++VR++ P+L    E++++++P A     G     V     P 
Sbjct: 739 ASLERRAAQTVLCEVLDALVRLLVPVLTFTTEEIYRHMPVA-----GERLASVQMLDMPE 793

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + ++    + +   W ++ E+R EV KVLE AR  K+IG++LEA+V L+      A  L
Sbjct: 794 ANVEYIDVELEKK--WDRVKEIRKEVLKVLETARQNKIIGNALEAQVDLYA-HGDTAEFL 850

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           R M      A  L  IFI+S V + P              E        + + V+ A G+
Sbjct: 851 RAM------AAELATIFIVSGVSLHPLAEAPAEAARAEGME--------LAVAVAPAGGA 896

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW Y+  +GS  E+PTLC RC  V+
Sbjct: 897 KCERCWMYAEGIGSDPENPTLCPRCAGVV 925


>gi|403069262|ref|ZP_10910594.1| isoleucyl-tRNA synthetase [Oceanobacillus sp. Ndiop]
          Length = 918

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F++ G+ ADW+NPY+TL  +YEAAQI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 138 SQFRQLGIRADWDNPYITLTKDYEAAQIKVFGEMAKKGYIYKGLKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G          + +WTTTPWT+PAN  ++++ +
Sbjct: 198 EIEYQDKR-SASIYVAFEVTDGKDLLDG-------GEKIIIWTTTPWTIPANLGISLHPQ 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
           L+Y V E            AN +               +VA  L+ T+  + G + V + 
Sbjct: 250 LEYVVAE------------ANGEK-------------FVVAQALLDTVTEELGWEAVKVT 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G + +     HP  +R   V++ GD++TT++GTG VHTAPGHG++D+  S +YG+ 
Sbjct: 285 KTFKGKEADRVVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHGEDDFYVSKRYGID 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              PVDD+G FTEEA  F GL      N  V + L+E  +L+      H YP+DWRTKKP
Sbjct: 344 AFCPVDDKGVFTEEAPGFEGL-FYDSANKVVTEKLEEVGALLKMSFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++ FRQ  +D I QV W P
Sbjct: 403 TIFRATAQWFASIKDFRQDILDEIKQVNWYP 433



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 32/339 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q S+ YRK+R T R+LL NL D+  
Sbjct: 604 VPSKVQKQLGADILRLWVASVDYQADVRISDDILKQTSEAYRKIRNTFRFLLANLADFNP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++ + L  +D+Y L +L+ +V +IR +YE Y++ + F  I  F  VDLS+FY D A
Sbjct: 664 ATDKVADEKLEEVDRYMLHRLQQLVSDIRSNYEKYEYSQTFHQIHNFCAVDLSSFYLDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     +  RRS QT     L ++V+++ PI+PH  ++VW+ +P       G  AE
Sbjct: 724 KDVLYIEAADNKRRRSIQTGYYEILTTLVKLLTPIIPHTMDEVWEYIP-------GVEAE 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYF-WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            V  +  P   E      + ++   W   +++R +V K LE AR  K IG SLEA++ + 
Sbjct: 777 SVQLTDIP---EARIVAGIEDVQAKWDHFMKVRDDVLKALEEARNEKTIGKSLEARITIV 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             DA     L  M       + L +  I+S   +  S+                +    V
Sbjct: 834 PKDAETEKVLANM-------EHLHQFLIVSDAVIRESSDQA-------------KAYKYV 873

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I V +  G KCERCW  S  VG   +HP LC+RC  V+
Sbjct: 874 DIFVEKHPGEKCERCWVASETVGEDHDHPELCTRCATVV 912


>gi|376261454|ref|YP_005148174.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
 gi|373945448|gb|AEY66369.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
          Length = 929

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 201/332 (60%), Gaps = 35/332 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G KPV+W P   TALAEAE
Sbjct: 141 SFKRLGVRADWEHPYITLKPEFEAKQIEVFGEMAKKGHIYKGLKPVYWCPECETALAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVWTTTPWTVPANAAVAVNA 120
           +EY +   + SIY  F++        G+     P   +   +WTTT WT+PAN A+ +N 
Sbjct: 201 IEYADD-TTVSIYVKFQV----RDDKGIFQGVAPKEKINFVIWTTTTWTLPANLAICLNE 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKLVI 179
             +Y+VV+            AN +             + ++A++LV  T++A   T+   
Sbjct: 256 SFEYSVVK------------ANDE-------------YYVLAAELVENTMKAAAITEYET 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                GS+LE     HP  +R   +VI GD++T E+GTG VHTAPGHG ED++   KY +
Sbjct: 291 VAKFKGSELEGILCKHPFLDRD-SIVILGDHVTLEAGTGCVHTAPGHGAEDFLVCQKYKI 349

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+L PVD +G  T+EAG F+G+      N A+++ L +   L+  E   H+YP+ WR K 
Sbjct: 350 PVLVPVDSKGFLTKEAGPFAGM-FYKKSNPAIIEKLTQDGRLLASEKITHQYPHCWRCKD 408

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFAS++GFR+ A+ AI  VKW+P
Sbjct: 409 PIIFRATEQWFASIDGFRKEALKAIKDVKWIP 440



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 201/333 (60%), Gaps = 25/333 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++D+    +S+ Y+
Sbjct: 619 YGADILRLWVASSDYTTDIRISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYN 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D++AL ++ N++K + E+Y++Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 ELNELDKWALSRMNNLIKRVNEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSN 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L ++VR++ P+L    E++WQ +P  +  +D +  E V  + WP
Sbjct: 739 ADSKERRAAQTVMYEILHNLVRMLTPVLAFTTEEIWQYMP--HRADDDT--ESVQLNSWP 794

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++EK+    + E   W KI ELR++V+K LE+AR  K IG SL AKV L+ D  SL   
Sbjct: 795 QVNEKYVNTELSEK--WEKIFELRSDVSKALEIARANKTIGHSLNAKVTLYADGESLE-- 850

Query: 577 LREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
                  K     L  +FI+S VE+  L   P    +     G         + + V +A
Sbjct: 851 -----FIKSIESDLVTVFIVSAVEIKNLADAPAAAQKGEEMPG---------IKVSVEQA 896

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            G KCERCW +S  VG   +HPTLC RC +++ 
Sbjct: 897 PGDKCERCWMFSEFVGKDEKHPTLCKRCADIVG 929


>gi|392394891|ref|YP_006431493.1| isoleucyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
           51507]
 gi|390525969|gb|AFM01700.1| Isoleucyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
           51507]
          Length = 922

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 200/329 (60%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPY+TL+ EYEAAQI VFG+M+ + YIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVRGDWKNPYITLEKEYEAAQIGVFGKMARKKYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S +IY  F +        G+L +   +  + +WTTTPWT+PAN A+ ++ + 
Sbjct: 199 IEYAE-KTSDAIYVKFPVKEG----KGVLTD--ENTFVIIWTTTPWTLPANLAITLHGEF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YA V+++                         K   IVA  ++ +L + W  +L ++K 
Sbjct: 252 SYAQVQVE-------------------------KEHWIVAEGMLESLRSLWQLELPVEKR 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP   R   V+I G+++T E+GTG VHTAPGHG++D+    +YGLP+L
Sbjct: 287 FVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPGHGEDDFNVGKEYGLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+  +H Y + WR   P I
Sbjct: 346 CPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLRSLNALVHEDKIKHSYAHCWRCNNPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 405 YRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 189/341 (55%), Gaps = 29/341 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPT 664

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVDYKDLPEIDRWALLQLGKVTERVLQGYEKYEFHWVYHTVHNFCAVELSAIYLDIVK 724

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY  G  S  RR+ QTVL   L ++VR+IAP+L + A+++W  +P         A   
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLIAPVLTYTADEIWSYVPGV------PAGSP 778

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           +   + P +D +W    + +   W  +L +R+EV K LE AR  KLI   L A+V L+  
Sbjct: 779 IQTEEMPKVDPQWMDEALEQK--WETLLAVRSEVTKALEKARQDKLINHPLTAQVDLYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLP---STPNGLIRNIPYSGEYLVEGKDK 626
           +A L   LR       D   L  IFI+S V++       P G+I         + E  + 
Sbjct: 836 NAKLEGFLR-------DIPNLSEIFIVSAVQIHSGGEDKPEGVI---------MAEDLED 879

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             I V+ A G KCERCW Y T VG   EHP+LC RC  V++
Sbjct: 880 FGIAVNSAAGEKCERCWIYDTGVGENQEHPSLCPRCASVVS 920


>gi|409386153|ref|ZP_11238618.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
 gi|399206563|emb|CCK19533.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
          Length = 932

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 38/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK  GV  DW NPY+TL PE+EAAQI VFGQMS  GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKSLGVLGDWENPYVTLQPEFEAAQIRVFGQMSENGYIYKGAKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F+       T GLL E    +   +WTTTPWT+P+N  +  +    
Sbjct: 199 EYQDVR-SASIYVAFKAT----DTKGLLPE---GVEFVIWTTTPWTIPSNLGIFAHPDYD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVIKK 181
           Y +V +                       D++    ++AS+L+ T+  K  W    V+ +
Sbjct: 251 YVLVAVN----------------------DRQ---FVIASELLNTVAEKLEWADYKVL-Q 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+L+     HP  +R   +V+  +Y+T +SGTGLVH APGHG++DY  S KY L +
Sbjct: 285 TIKGSELDGMVVKHPFYDRDT-LVMNAEYVTLDSGTGLVHVAPGHGEDDYFFSRKYKLGV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+DD G +T+EA    GL    +GN  V ++L+E  +L+  E + H YP+DWRTKKP 
Sbjct: 344 LSPIDDRGYYTDEAPGLEGL-FYDEGNKKVTEWLEENNALLKLEFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           IFRAT QWFAS++ FR+  +  +  V W+ P
Sbjct: 403 IFRATPQWFASIDKFRENILSEVENVDWIVP 433



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 188/348 (54%), Gaps = 40/348 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P      YGAD+LRLWV+SVD T DV +   ++ Q S+ YRK+R TLR+L+ N  D+ + 
Sbjct: 604 PKDVTKQYGADILRLWVASVDNTSDVRVSMDLIGQTSEAYRKIRNTLRFLIANTSDFDKT 663

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++++DL   D+Y L +L  +++++RE+Y+ Y F ++++ I  F+  DLS FY D AK
Sbjct: 664 KDAVAFEDLKGSDKYLLVRLNQVIQSVREAYDRYNFMEVYRTIFNFLTNDLSAFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL-----PFAYTLEDG 504
           D +Y     S  RR  QTV+   L+ + +++ PI+PH AE++W  L      +AY L + 
Sbjct: 724 DIVYIETANSTERRRMQTVMYDVLVKLTKLLVPIVPHTAEEIWTYLEQEEEAYAY-LTEM 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
            +AE + ++   +LD            FW   LE RT V+K LE+AR  K+IG SLEA V
Sbjct: 783 PSAELIPDAA-EMLD------------FWSAFLEFRTSVHKALEMARDEKVIGKSLEASV 829

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++ D+A+     + +  +  + + +  + I+S+           I +   + E  V+  
Sbjct: 830 TVYPDEAT-----KVLLASVAETENVATLLIVSE----------FIVSHQAAPENAVKVG 874

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTL---CSRCYEVLAVQ 669
           D   I V+ A G  C+RC      VG+   +P L   C  C  ++  +
Sbjct: 875 DTA-ITVAHASGEVCQRCRRIDETVGTNA-NPHLAEFCDHCASIVTAE 920


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV++       +AA A   ++                       E  W    V+ KT+
Sbjct: 251 YHVVDVSGKRYVVAAALAESVAK-----------------------EIGWDAWSVV-KTV 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+L 
Sbjct: 287 KGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G  TEEA  F G+    D N A+ + L+E  +L+      H YP+DWRTK+PTIF
Sbjct: 346 PVDERGYMTEEAPGFEGM-FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++  R   + AI + KW+P
Sbjct: 405 RATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 191/341 (56%), Gaps = 29/341 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P     E+  + +
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--NRRENVESVQ 780

Query: 509 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
                +   +D        GE   +  W   +++R ++ K LE AR  K+IG SL A V 
Sbjct: 781 LTDMPEPIAID--------GEEALLAKWDAFMDVRDDMLKALENARNEKVIGKSLTASVI 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  D +     R++  A  DAD L+++ I+S   +     +      P   E L    D
Sbjct: 833 VYPKDEA-----RKLL-ASLDAD-LRQLLIVSAFSIADEPYDA----APAEAERL----D 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + V  AEG  CERCW  +  VG    HPTLC RC  ++
Sbjct: 878 HVAVLVRPAEGETCERCWTVTPAVGQDPSHPTLCPRCAHIV 918


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 207/331 (62%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G KPV+W     TALAEA
Sbjct: 138 SQFIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR++       G++++ L +L   +WTTT WT+PAN A+ +N +
Sbjct: 198 EIEYSD-ETSDSIYVKFRVIDDIGKFKGIVDD-LNNLYFVIWTTTTWTIPANLAICLNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             YA+                         K  K+++I+ A D++  +E + G +   I 
Sbjct: 256 FDYALA------------------------KYGKEIYIM-AKDMLDDIERETGLENREII 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G DLE  R  HP+ +R   ++I GD++T E+GTG VHTAPGHG+ED++   KYGL 
Sbjct: 291 ATFKGKDLEGMRAKHPLFDRS-SLIILGDHVTLEAGTGCVHTAPGHGEEDFIVGQKYGLE 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+PVDD+G FTE+AGK+ GL    D N  + + L++  +L+  +   H YP+ WR K P
Sbjct: 350 VLNPVDDKGCFTEKAGKYKGL-FYADANKVIKEDLEKVNALLASKTLTHSYPHCWRCKNP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASV+GFR  A++AI +V W+P
Sbjct: 409 VIFRATEQWFASVDGFRDEALNAIRKVNWIP 439



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 192/333 (57%), Gaps = 21/333 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWTVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y++L  ID++AL++   ++K++  S++ Y+F+    ++  F IVD+SN Y D+ K
Sbjct: 671 KDALPYEELLDIDKWALYKFNELIKDVTSSFDRYEFYDFLHLVHTFCIVDMSNLYLDILK 730

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RR+ QT L   L   VR+IAP+L   A+++W  +      E  +  E 
Sbjct: 731 DRLYTFPAASKERRAAQTTLYTILDGFVRIIAPVLTFTADEIWSYMKH----EANNNYES 786

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  + WP  ++ +    + E   W K+ ++R +V+K LE++R  K IG SLEA+V ++  
Sbjct: 787 VQLADWPQPNDAYDNKEIVEK--WNKLFDIRKDVSKALEISRANKEIGHSLEAQVDIYAS 844

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +  L   L++        + L  +FI+S   VL +  + +  N   S +Y       + I
Sbjct: 845 N-DLYEFLKQF------EEDLNTVFIVSNT-VLHNEDDNIPDNSYRSEDY------NLTI 890

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            +S A G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 891 KISHAPGEKCERCWMYSETVGTDKEHPTICARC 923


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G       D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV++       +AA A   ++                       E  W    V+ KT+
Sbjct: 251 YHVVDVSGKRYVVAAALAESVAK-----------------------EIGWDAWSVV-KTV 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGLP+L 
Sbjct: 287 KGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFLVGQKYGLPVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G  TEEA  F G+    D N A+ + L+E  +L+      H YP+DWRTK+PTIF
Sbjct: 346 PVDERGYMTEEAPGFEGM-FYEDANKAITQKLEEVGALLKLGFITHSYPHDWRTKQPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++  R   + AI + KW+P
Sbjct: 405 RATTQWFASIDKIRSELLQAIKETKWIP 432



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 190/341 (55%), Gaps = 29/341 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P        +  E
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP--------NRRE 774

Query: 509 FVFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            V   +   + E    +  GE   +  W   + +R ++ K LE AR  K+IG SL A V 
Sbjct: 775 NVESVQLTDMPEPIAIY--GEEALLAKWDAFMNVRDDILKALENARNEKVIGKSLTASVI 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  D +     R++  A  DAD L+++ I+S   +     +      P   E L    D
Sbjct: 833 VYPKDEA-----RKLL-ASLDAD-LRQLLIVSAFSIADEPYDA----APAEAERL----D 877

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + V  AEG  CERCW  +  VG    HPTLC RC  ++
Sbjct: 878 HVAVLVRPAEGETCERCWTVTPAVGQNPSHPTLCPRCAHIV 918


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 142/332 (42%), Positives = 200/332 (60%), Gaps = 35/332 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G KPV+W P   TALAEAE
Sbjct: 141 SFKRLGVRADWEHPYITLKPEFEAKQIEVFGEMATKGHIYKGLKPVYWCPECETALAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVWTTTPWTVPANAAVAVNA 120
           +EY +   + SIY  F++        G+     P   +   +WTTT WT+PAN A+ +N 
Sbjct: 201 IEYADD-TTVSIYVKFQV----RDDKGIFEGVAPKEKVNFVIWTTTTWTLPANLAICLNE 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKLVI 179
             +Y+VV+            AN +             + ++A++LV  T++A   T+   
Sbjct: 256 SFEYSVVK------------ANDE-------------YYVLAAELVENTMKAAAVTEYET 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                GS LE     HP  ++   +VI GD++T E+GTG VHTAPGHG ED++   KY +
Sbjct: 291 VAKFKGSQLEGILCKHPFLDKD-SIVILGDHVTLEAGTGCVHTAPGHGAEDFIVCQKYKI 349

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+L PVD +G  T+EAG F+G+      N A+++ L +   L+  E   H+YP+ WR K 
Sbjct: 350 PVLVPVDSKGFLTKEAGPFAGM-FYKKSNSAIIEKLTQDGRLLASEKITHQYPHCWRCKD 408

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFAS++GFRQ ++ AI  VKW+P
Sbjct: 409 PIIFRATEQWFASIDGFRQESLKAIKDVKWIP 440



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/333 (41%), Positives = 206/333 (61%), Gaps = 25/333 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++D+    +S+ Y+
Sbjct: 619 YGADILRLWVASSDYTTDIRISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYN 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  +D++AL ++ N++K + E+Y++Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 DLNELDKWALGRMTNLIKKVNEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             +  RR+ QTV+   L ++VR++ P+L    E++WQ +P  +  ED +  E V  + WP
Sbjct: 739 PDTKERRAAQTVMYEILHNLVRMLTPVLAFTTEEIWQYMP--HRAEDDT--ESVQLNSWP 794

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++EK+    + E   W KI ELR++V+K LE+AR  K IG SL AKV L+ D  +L   
Sbjct: 795 QVNEKYVNTALSEK--WEKIFELRSDVSKALEIARANKTIGHSLNAKVSLYADGENLE-- 850

Query: 577 LREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
                  K   + L  IFI+S VEV  L   P    +     GE + E K    + V +A
Sbjct: 851 -----FIKSIENDLVTIFIVSAVEVKNLADAPADAQK-----GEEIPEIK----VSVEQA 896

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            G KCERCW +S  VG+  +HPTLC RC +V+ 
Sbjct: 897 PGEKCERCWMFSEFVGNDEKHPTLCKRCADVVG 929


>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 916

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 195/323 (60%), Gaps = 34/323 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++   PD    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---PDAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKK 181
           +Y    +                        QK +     S+ V     +W  + + ++K
Sbjct: 250 KYGQYNVNG----------------------QKYIIAEALSETVAEA-LEWDKESIQLEK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G +LE     HP  +R   +VI GD++TT++GTG VHTAPGHG++DY+   KY LP+
Sbjct: 287 EFTGKELEYVEAQHPFLDR-VSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SP+DD+G FTEE G+F G+      N AV   L E+ +L+      H YP+DWRTKKP 
Sbjct: 346 ISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLNFITHSYPHDWRTKKPV 404

Query: 302 IFRATEQWFASVEGFRQAAMDAI 324
           IFRAT QWFAS+   RQ  +DAI
Sbjct: 405 IFRATPQWFASISKVRQDILDAI 427



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 207/372 (55%), Gaps = 34/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  +DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENDLLDVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + +++APIL H AE+VW + P           E V  +  P + +  +T     +  W 
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLADMPEVVDVDKTL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
            +++LR +VN+ LE AR  K+IG SLEAKV +  +++  A+   +      + + LQ++F
Sbjct: 800 TLMDLRDDVNRALEQARNEKVIGKSLEAKVIIGNNESFKATEFLQ------EFNDLQQLF 853

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVEV+ +  NG   +  Y             I +  AEG KCERCWNYS ++GS  E
Sbjct: 854 IVSQVEVVDTVENGT--SYKYGD-----------IRIEHAEGEKCERCWNYSEELGSVGE 900

Query: 655 HPTLCSRCYEVL 666
              LC RC EV+
Sbjct: 901 LDHLCPRCQEVV 912


>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 929

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 150/331 (45%), Positives = 196/331 (59%), Gaps = 37/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W+NPY+TL PE+EA QI VFG+M+  GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 140 FKRLGVTGTWDNPYVTLKPEFEAEQIRVFGKMAENGYIYKGLKPIYWSPSSESSLAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        GLL E   D    +WTTTPWT+PAN  + V+    
Sbjct: 200 EYKDVE-SASIYVAFKVKDG----KGLLGE---DTSFVIWTTTPWTLPANLGIFVHPDYV 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           YA V                K+  G           +VA DLV +L A  G + V I + 
Sbjct: 252 YAQV----------------KTSAGT---------FVVAKDLVESLTATLGWENVEILQE 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS LE     HP   R+  +V+ GDY+T ++GTGLVHTAPGHG++D+  S KY L +L
Sbjct: 287 FPGSALEYMTAWHPFYERES-LVMNGDYVTLDAGTGLVHTAPGHGEDDFYYSRKYNLAVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G +T+EA  F G+    D N  +   L E+ +L+    + H YP+DWRTKKP I
Sbjct: 346 SPVDSQGCYTDEAPGFEGM-FYADANKVITDLLTEKGALLNLSYFVHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
           FRAT QWFAS++ FRQ  +D I   VKW  P
Sbjct: 405 FRATPQWFASIDAFRQEILDVIENDVKWYHP 435



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 188/340 (55%), Gaps = 33/340 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +E    GAD++RLWVSSVDY  DV I   +L Q+S++YRK+R T+R++L N  D+   
Sbjct: 606 PAKEMKTKGADIIRLWVSSVDYESDVRISDDILNQVSEVYRKIRNTMRFMLANTTDFDPK 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++++DL  +DQY L +   +V +IR++Y++YQF  ++Q +  F  VDLS FY D AK
Sbjct: 666 AHAVAFEDLRTVDQYMLVRFNQLVDSIRKAYDNYQFSTVYQGVINFCTVDLSQFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y      F RR+ QTVL   L+ + ++++PIL H  E+VW+ L             +
Sbjct: 726 DVVYIDQENGFERRAMQTVLYDILVKLTKLLSPILVHTTEEVWKYLK--------EEEAY 777

Query: 510 VFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           V  +++P +     T   GE   +  W +  ++R    K LE AR  KLIG + EAKV L
Sbjct: 778 VQLAEFPEV-----THYEGEEAILARWAEFFKVRNTALKALEEARNEKLIGKNFEAKVTL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +     +A  L  + T       + ++FI+SQ+EV P            + E  V+G + 
Sbjct: 833 YPTQ-EVADLLDSLQT------DVAQLFIVSQLEVAPVGTA--------APENAVQG-EG 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V + V  A+G  C+RC     +VG+  + PTLC RC  ++
Sbjct: 877 VSVVVEHAQGETCQRCRAVKVEVGTLEDAPTLCHRCATIV 916


>gi|299821567|ref|ZP_07053455.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817232|gb|EFI84468.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 929

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 205/332 (61%), Gaps = 40/332 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW NPY+TL PEYEAAQI VFG+M+ +GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 148 FKRLGVAADWENPYITLQPEYEAAQIRVFGKMAEKGYIYKGLKPIYWSPSSESSLAEAEI 207

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVWTTTPWTVPANAAVAVNAKL 122
           EY +   S SIY  F++V           + LPD   L +WTTTPWT+PAN  ++VN + 
Sbjct: 208 EYKDVK-SASIYVAFKVVDG--------KDVLPDDAELVIWTTTPWTLPANLGISVNPEY 258

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y+VV++                        ++K   ++A +L+  +  E  W     ++
Sbjct: 259 TYSVVKV-----------------------GERK--FVIAKELLEQVAKEIGWEDYESLQ 293

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + + G +LE     HP  +R   V+IG D++T ++GTGLVHTAPGHG++DY    +Y L 
Sbjct: 294 E-VKGDELEYVTAQHPFYDRTSLVMIG-DHVTLDAGTGLVHTAPGHGEDDYFIGKRYDLE 351

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD  G +T+EA  F G+      N  + + L+E+ +L+  + + H YP+DWRTKKP
Sbjct: 352 VLSPVDSRGCYTDEAPGFEGI-FYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKP 410

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 411 VIYRATAQWFASIDAFRQNILDEVEKVDWVIP 442



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 181/331 (54%), Gaps = 31/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWV+SVDY  DV +    L Q++++YRKLR TLR+LL N+ D+    ++++++D
Sbjct: 621 GADILRLWVASVDYESDVRVDMNTLNQVAEVYRKLRNTLRFLLANVSDFDPKADTVAFED 680

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L  ++ +IR+ Y++Y F  +++ I  F   +LS FY D AKD +Y    
Sbjct: 681 LRSVDQYMTVRLNQVIDSIRKGYDAYAFSSVYKTIVNFCTSELSAFYLDFAKDVVYIEPE 740

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR  QTV     +++ +++ PILPH +E++W+   F    ED     +V  ++ P 
Sbjct: 741 NSHARRCMQTVFYQTAVALTKLLTPILPHTSEEIWK---FYKEEED-----YVQLAELPA 792

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +    TF   +     W   + LR +V K LE AR  KLIG S EAKV L+      ++
Sbjct: 793 GE----TFANQDALLTEWNAFMSLRDKVLKALEEARNAKLIGKSFEAKVTLYP-----SA 843

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            ++E+     D+D L ++ I+SQ  +  +         P          + V + V +A+
Sbjct: 844 SVKELIDGL-DSD-LAQLLIVSQFSLADTETQA-----PAEAHVF----EDVSVLVEKAQ 892

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G  CERC    T VG    HPTLC+RC +++
Sbjct: 893 GETCERCRVVKTDVGHDHNHPTLCARCADIV 923


>gi|408356931|ref|YP_006845462.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
 gi|407727702|dbj|BAM47700.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
          Length = 916

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 201/330 (60%), Gaps = 34/330 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FK+ GV  DW+NPY+TL+ EYEAAQIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 137 AQFKQLGVRGDWDNPYITLNKEYEAAQIEVFGEMAKKGYIYKGLKPVYWSPSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +       SG       D    +WTTTPWT+PAN A+A++  
Sbjct: 197 EIEYQDKR-SPSIYVAFDVKDGGELLSG-------DEKFVIWTTTPWTLPANLAIALHPN 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L Y VV +            +KK   G  L ++      VA+ L      +W    + KK
Sbjct: 249 LDYVVVNVN-----------DKKYIIGEELLEK------VATKL------EWADYTITKK 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G + +     HP  +R   +++ GD++TTE GTGLVHTAPGHG++D++   KY L +
Sbjct: 286 -FKGIEADRLVAKHPFYDRDSLIIV-GDHVTTEDGTGLVHTAPGHGEDDFIVGQKYDLDV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD +G FT+EA  F G+      N  V   L+E+ +L+  +   H YP+DWRTK+P 
Sbjct: 344 LCPVDYKGVFTDEAPGFEGV-FYDKANKMVTDLLEEKGALLSLDFITHSYPHDWRTKQPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFAS++ FR+  ++ IG V+W+P
Sbjct: 403 IYRATPQWFASIKDFREEILEEIGNVEWLP 432



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 195/356 (54%), Gaps = 30/356 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +    YGAD+LRLWV+SVDY  DV +   ++RQ ++ YR
Sbjct: 586 TLDGQGRKMSKSIGNVI-VPAKIMKQYGADILRLWVASVDYQADVRVSDDIIRQTTEGYR 644

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    N +    L  +D+Y L +L+ ++  +  +Y++Y F  +F 
Sbjct: 645 KIRNTFRFLLGNLADFDPEVNKVEDQHLDELDRYMLVKLQQLISRVLNAYDNYDFSTVFN 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
           +I +F   +LS+FY D AKD LY     S  RR+ QTV   ++++IV++I PIL H AE+
Sbjct: 705 LIHQFCSQELSSFYLDYAKDILYIEQENSQRRRAIQTVYYENIVTIVKLITPILTHTAEE 764

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW  +P           ++V  +  P   E  ++   G +  W   + +R ++ K LE A
Sbjct: 765 VWSYIP-------NQTEKYVQLTDMPKAREIEQS--EGLLEKWDHFVNVRDDILKALEEA 815

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IG SLEAK+ LF  +      L E+       + L ++FI+S+VE+L    N  +
Sbjct: 816 RADKVIGKSLEAKILLFGKEDQTKKLLSEI-------ERLDQLFIVSKVELLDQA-NDQL 867

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++  Y           V + V + +  +CERCW  S  VG    HP LC+RC +++
Sbjct: 868 KDYEY-----------VQVHVEKYDQERCERCWVVSETVGQHESHPDLCARCADIV 912


>gi|403379006|ref|ZP_10921063.1| protein IleS [Paenibacillus sp. JC66]
          Length = 923

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 200/332 (60%), Gaps = 38/332 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW NPY+TL PEYEA QI VFG+M  +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 138 AQFKRLGVRGDWENPYITLQPEYEALQIRVFGEMVNKGYIYKGLKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY E   S SIY  F +        G L E   D  + +WTTTPWT+PAN  ++V+ +
Sbjct: 198 EIEYKE-KTSPSIYVAFPVKDG----KGKLPE---DAEVIIWTTTPWTLPANLGISVHPE 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
           L Y VV +           A +K               ++A  L+ T      W    VI
Sbjct: 250 LPYVVVNV-----------AGRK--------------FVLAEGLLETAAKAIGWEAYEVI 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T+ GS+LE+    HP  +R   +V+ GD++T E+GTG VHTAPGHG++D+    KYG+
Sbjct: 285 -STVQGSELEHVVCQHPFYDRDS-LVMTGDHVTLEAGTGCVHTAPGHGEDDFAVGQKYGI 342

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L P+DD+GKFT EA  + G+      N  ++  L+++  L+ +   +H+Y +DWRTKK
Sbjct: 343 GVLCPIDDQGKFTSEAPGYEGM-FYEKANAPIMDLLEQKGRLLKQGTIQHQYAHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I+RATEQWFAS++GFR+  ++ I  + W P
Sbjct: 402 PVIYRATEQWFASIDGFREKMLEEIRNINWTP 433



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/336 (38%), Positives = 193/336 (57%), Gaps = 41/336 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV I   +L Q+S++YRK+R TLR+ LGNLH +    + + + +
Sbjct: 614 GADILRLWVSSVDYQADVRISDNILSQISEVYRKIRNTLRFFLGNLHGFDPRKDQVPFQE 673

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++A+  L  +++ + ++Y++Y+F  ++Q +  F  V++S FY D+ KDRLYT   
Sbjct: 674 MNELDRFAIIHLNRLIEKVLKAYDAYEFHMVYQAVHHFCAVEMSAFYLDIVKDRLYTEAP 733

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL-----EDGSAAEFVFE 512
               R++ QTVL   L  I ++IAPILPH +++VW+++P    L     E     E V++
Sbjct: 734 NDPGRKAAQTVLYEALTVITKLIAPILPHTSDEVWKHIPGMTELSVQLTEMPEPNEAVYD 793

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA--KVYLFTDD 570
           S+   L+ KW  F           + +R EV K LE AR  K+IG+SL A  K+Y+ +D 
Sbjct: 794 SR---LEHKWSRF-----------MAVRDEVFKALEEARNQKVIGNSLGAALKLYVDSDT 839

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
           A L  +           D L ++FI+S V V  S  +   ++    G+        + I 
Sbjct: 840 AQLLEQF----------DRLDQLFIVSDVGVF-SKADSAAQDAKAFGD--------LHIK 880

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V  AEG KCERCW  +T+VGS   HPTLC RC EV+
Sbjct: 881 VLLAEGEKCERCWVVTTEVGSKQAHPTLCPRCAEVV 916


>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 929

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/332 (43%), Positives = 201/332 (60%), Gaps = 35/332 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G KPV+W P   TALAEAE
Sbjct: 141 SFKRLGVRADWEHPYVTLKPEFEAKQIEVFGEMAKKGHIYKGLKPVYWCPECETALAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVWTTTPWTVPANAAVAVNA 120
           +EY +   + SIY  F++        G+     P   +   +WTTT WT+PAN A+ +N 
Sbjct: 201 IEYADD-TTVSIYVKFQV----RDDKGIFEGVAPKEKINFVIWTTTTWTLPANLAICLNE 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKLVI 179
             +Y+VV+            AN +             + ++A++LV  T++A   T+   
Sbjct: 256 SFEYSVVK------------ANDE-------------YYVLAAELVENTMKAAAITEYET 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                GS+LE     HP  +R   +VI GD++T E+GTG VHTAPGHG ED++   KY +
Sbjct: 291 VAKFKGSELEGILCKHPFLDRD-SLVILGDHVTLEAGTGCVHTAPGHGAEDFLVCQKYKI 349

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+L PVD +G  T+EAG F+G+      N A+++ L +   L+  E   H+YP+ WR K 
Sbjct: 350 PVLVPVDSKGFLTKEAGPFAGM-FYKKSNPAIIEKLTQDGRLLASESITHQYPHCWRCKD 408

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFAS++ FR AA++AI  VKWVP
Sbjct: 409 PIIFRATEQWFASIDSFRDAALEAIKTVKWVP 440



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 198/333 (59%), Gaps = 25/333 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++ +    +S+ Y 
Sbjct: 619 YGADILRLWVASSDYTTDIKISKDLLKQLSEVYRKIRNTARYILGNINGFNPDTDSVDYS 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D++AL+++ N++K + E+Y  Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 ELSELDRWALYKMTNLIKKVNEAYSGYEFHMMFHAIHNFCVVDMSNFYLDIIKDRLYTSK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L S+VR++ P+L    E++WQ +P  +  ED    E +  + WP
Sbjct: 739 PDSKERRAAQTVMYEILQSLVRMLTPVLAFTTEEIWQYMP--HRAEDD--IESIQLNSWP 794

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++E +    + E   W KI ELR++V+K LE+AR  K IG SL AKV L+ D  +L   
Sbjct: 795 QVNEMYLDTQLAEK--WEKIFELRSDVSKALEIARANKTIGHSLNAKVTLYADGENLE-- 850

Query: 577 LREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
                  K     L  +FI+S VE+  L   P+    +         E   ++ + V +A
Sbjct: 851 -----FIKSIESDLVTVFIVSAVEIKNLADAPSAAQND---------EEMPEIKVSVEQA 896

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            G KCERCW +S  VG   +HPTLC RC +V+ 
Sbjct: 897 PGDKCERCWMFSEFVGEDEKHPTLCKRCADVVG 929


>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 933

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/390 (39%), Positives = 220/390 (56%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQEDYV +L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQEDYVVALNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGYLTEEAGDLFKGL-VYSEANKAIIEYLTKTGYILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  + AI ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W++L  A T E    AE +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLS-AETRE----AESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNTLKEFIKE------NLELLETVFIVSDLEVVSSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-ELGSDSEHPTLCPRCAAVL 932


>gi|433654816|ref|YP_007298524.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
 gi|433293005|gb|AGB18827.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
          Length = 927

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 206/332 (62%), Gaps = 32/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F R GV  DW NPYLTL  EYEA QIEVFG+M+ +GYIY+G KPV+W     TALAEA
Sbjct: 138 SQFIRLGVRGDWKNPYLTLKHEYEAKQIEVFGEMAKKGYIYKGLKPVYWCTDCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++++ L DL   +WTTT WT+PAN A+ +N +
Sbjct: 198 EIEYSD-ETSDSIYVKFRVTDDLGKFKGIVDD-LNDLYFVIWTTTTWTIPANLAICLNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG--TKLVI 179
             YA+                  S+ G       K   I+A D++  +E + G   + VI
Sbjct: 256 FDYAL------------------SKYG-------KEIYIMAKDMLDNIERETGLENREVI 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G DLE  R  HP+ +R   ++I GD++T E+GTG VHTAPGHG+ED++   KYGL
Sbjct: 291 -ATFKGKDLEGMRAKHPLFDRS-SLIILGDHVTLEAGTGCVHTAPGHGEEDFIVGQKYGL 348

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L+PVDD+G+FTE+AGK+ GL    D N  + + L++  +L+  +   H YP+ WR K 
Sbjct: 349 DVLNPVDDKGRFTEKAGKYKGL-FYADANKVIKEDLEKVNALLASKTLTHSYPHCWRCKN 407

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFASV+GFR  A++AI +V W+P
Sbjct: 408 PVIFRATEQWFASVDGFRDEALNAIRKVNWIP 439



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 193/333 (57%), Gaps = 21/333 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y++L  ID++AL++   +VK++  +++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDALPYEELLNIDKWALYKYNQLVKDVTTAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RR+ QT L   L   VR+IAP+L   A+++W  +      +  +  E 
Sbjct: 731 DRLYTFPAASKERRAAQTTLYTILDGFVRIIAPVLTFTADEIWSFMKH----DANNNYES 786

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  + WP  ++ +    + E   W K+ ++R +V+K LE++R  K IG SLEA+V ++  
Sbjct: 787 VQLADWPQPNDAYDNKEIVEK--WNKLFDIRKDVSKALEISRANKEIGHSLEAQVDIYAS 844

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +  L   L++        + L  +FI+S   VL +  + +  N   S +Y       + I
Sbjct: 845 N-DLYEFLKQF------DEELNTVFIVSNT-VLHNEDDNIPDNSYRSEDY------NLAI 890

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            +S A G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 891 KISHAPGEKCERCWMYSETVGTDKEHPTICARC 923


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 198/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL  EYEA QI VFG+M  +G IY+G KP++WSPSS TALAEAE+
Sbjct: 140 FKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++       +G       D    +WTTTPWT+PAN  + VNA L+
Sbjct: 200 EYHDKK-SPSIYVAFKVQDGKGILAG-------DEEFVIWTTTPWTIPANLGICVNADLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y  V +                       D+K    IVA +LV +L  E  W T  ++  
Sbjct: 252 YVTVAVN----------------------DRK---FIVAKELVESLSKEVNWETYEIL-A 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  GSD E     HP+ +R+  ++I GD++T ++GTGLVHTAPGHG++D+    KY L +
Sbjct: 286 TYKGSDFEYMTAKHPLFDRES-LLILGDHVTLDAGTGLVHTAPGHGEDDFNAGRKYNLEV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD  G  T++A +F G+    D N AV + L+E+ +L+  +   H YP+DWRTKKP 
Sbjct: 345 LCPVDYRGYMTKDAFEFEGM-YYEDANKAVGQKLEEKGALLGLKFITHSYPHDWRTKKPI 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFAS+E  +   M+ I +V W+P
Sbjct: 404 IFRATEQWFASIEALKGQMMEQIKEVNWLP 433



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 180/332 (54%), Gaps = 36/332 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD++RLWV+SVDY  DV I   +++Q+++ YRK+R T R+LLGNL D+    + ++Y+
Sbjct: 611 YGADIVRLWVASVDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  +DQ+ + +L  + K ++ +YE Y+F  +F+ +  +I  DLS FY D  KD LY   
Sbjct: 671 DLNEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEK 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QT+L  H+  + R++AP++PH A++V+  +P       G     V+ +  P
Sbjct: 731 ADSQARRSIQTILYHHVYDMCRLLAPVIPHTADEVYSYIP-------GHTEISVYLTDMP 783

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
           V+ E      V     W + L LR +V K LE AR  K+IG SL A ++L+ +  + A  
Sbjct: 784 VVKEYANAAEVTTK--WSQFLSLRHDVLKALEEARNQKVIGKSLTASLHLYPNGETKAL- 840

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
              + + + D   L++IFI+S+  VL     P   ++             D + + V  A
Sbjct: 841 ---LNSLQAD---LKQIFIVSEC-VLEEGEAPEDALQF------------DGLAVVVKAA 881

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG  C+RCW     V        +C RC EV+
Sbjct: 882 EGHTCDRCW----LVVPAANEQGICPRCAEVI 909


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 198/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL  EYEA QI VFG+M  +G IY+G KP++WSPSS TALAEAE+
Sbjct: 140 FKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKEGLIYKGLKPIYWSPSSETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++       +G       D    +WTTTPWT+PAN  + VNA L+
Sbjct: 200 EYHDKK-SPSIYVAFKVQDGKGILAG-------DEEFVIWTTTPWTIPANLGICVNADLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y  V +                       D+K    IVA +LV +L  E  W T  ++  
Sbjct: 252 YVTVAVN----------------------DRK---FIVAKELVESLSKELNWETYEIL-A 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  GSD E     HP+ +R+  ++I GD++T ++GTGLVHTAPGHG++D+    KY L +
Sbjct: 286 TYKGSDFEYMTAKHPLFDRES-LLILGDHVTLDAGTGLVHTAPGHGEDDFNAGRKYNLEV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD  G  T++A +F G+    D N AV + L+E+ +L+  +   H YP+DWRTKKP 
Sbjct: 345 LCPVDYRGYMTKDAFEFEGM-YYEDANKAVGQKLEEKGALLGLKFITHSYPHDWRTKKPI 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFAS+E  +   M+ I +V W+P
Sbjct: 404 IFRATEQWFASIEALKGQMMEQIKEVNWLP 433



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 180/332 (54%), Gaps = 36/332 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD++RLWV+SVDY  DV I   +++Q+++ YRK+R T R+LLGNL D+    + ++Y+
Sbjct: 611 YGADIVRLWVASVDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  +DQ+ + +L  + K ++ +YE Y+F  +F+ +  +I  DLS FY D  KD LY   
Sbjct: 671 DLNEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEK 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QTVL  H+  + R++AP++PH A++V+  +P       G     V+ +  P
Sbjct: 731 ADSQARRSIQTVLYHHVYDMCRLLAPVIPHTADEVYSYIP-------GHTEISVYLTDMP 783

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
           V+ E      V     W + L LR +V K LE AR  K+IG SL A ++L+  +A   + 
Sbjct: 784 VVKEYANAAEVTTK--WSQFLSLRHDVLKALEEARNQKVIGKSLTASLHLYP-NAETKAL 840

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           L  +      AD L++IFI+S+  VL     P   ++             D + + V  A
Sbjct: 841 LNSL-----QAD-LKQIFIVSEC-VLEEGEAPEDALQF------------DGLAVVVKAA 881

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG  C+RCW     V        +C RC EV+
Sbjct: 882 EGHTCDRCW----LVVPAANEQGICPRCAEVI 909


>gi|379727685|ref|YP_005319870.1| isoleucyl-tRNA synthetase [Melissococcus plutonius DAT561]
 gi|376318588|dbj|BAL62375.1| isoleucyl-tRNA synthetase [Melissococcus plutonius DAT561]
          Length = 928

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 196/331 (59%), Gaps = 38/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW +PYLTLDP YEAA++ VFG+M+  GYIY+G KP++WSPSS ++LAEAE+
Sbjct: 139 FKRLGISGDWQHPYLTLDPVYEAAEVRVFGKMAELGYIYKGLKPIYWSPSSESSLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GLL+    D    +WTTTPWT+PAN  +AVN    
Sbjct: 199 EYKDIK-SPSIYVAFKVVDG----KGLLD---TDTSFVIWTTTPWTLPANEGIAVNPDFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y  +++                         KK   +VA DL+ T+     W    +I K
Sbjct: 251 YVAIDVNG-----------------------KKY--VVAKDLLSTVVDTIGWENPRII-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G +LE     HP   R   VV+ GD++T ++GTGLVHTAPGHG++DY+   +Y L I
Sbjct: 285 TFKGKELECMTAQHPFYERTSLVVL-GDHVTLDAGTGLVHTAPGHGEDDYLVGKQYNLEI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D  G  T+EA  F G+      N  V + L E+ +L+  + + H YP+DWRTKKP 
Sbjct: 344 LSPIDSRGMLTKEAPGFEGV-FYDKANPMVTELLKEKGTLLKLDFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           I+RAT QWFAS++ FRQ  ++ I  V W+ P
Sbjct: 403 IYRATPQWFASIDKFRQDILNNIKTVDWIIP 433



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 190/343 (55%), Gaps = 36/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P +     GAD+LRLWV SVDY  DV +   +L+Q+++IYRK+R T+R+LL N  D+  
Sbjct: 603 LPEKVIKQLGADILRLWVISVDYEADVRVSMDILKQVAEIYRKIRNTMRFLLANTDDFDP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 447
             N + Y++L  +D+Y + +L  ++K IRE  YE Y F +I++ I  F+ VDLS+FY D 
Sbjct: 663 NENKVHYNELRSVDKYMMIRLNQVIKEIREEGYEKYNFLRIYRQITNFLTVDLSSFYLDF 722

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
           AKD +Y     ++ RR  QTV     ++I ++++PILP  AE++WQ     Y  E     
Sbjct: 723 AKDVVYIEAENNYQRRCMQTVFYQIAVTITKLLSPILPFTAEEIWQ-----YVKE---PE 774

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E+V  S++P  +E      + +   W   L  R +V K LE AR  KLIG SLEAKV ++
Sbjct: 775 EYVQLSEFPGFEEFTNQDELMDT--WTAFLSFRDKVLKALEEARNSKLIGKSLEAKVTIY 832

Query: 568 TDDASLASRLREMCTAKHDADTLQRI----FIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
            ++     ++R +  A  D++  Q +    F++S+ EV   T   +I       E+    
Sbjct: 833 PNE-----QVRLLLEAV-DSNVAQLLIVSEFVVSENEV--DTSKNII-------EF---- 873

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            D + + + +AEG  CERC      +G   + P LC RC +++
Sbjct: 874 -DDMKVLIEKAEGETCERCRCVRKDLGIDAKLPQLCGRCAKIV 915


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4.1|SYI_STAHJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 40/331 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      T G++++   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDTKGVVDQ---DAQFIIWTTTPWTIPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VASDLVPTLEAKWGTKLV- 178
           +Y    +                          K +II   ++ D+   LE  W    + 
Sbjct: 250 KYGQYNVNG------------------------KKYIIAQALSEDVAEALE--WDKDAIQ 283

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY 
Sbjct: 284 LEKEFTGKELEYVEAQHPFLDR-ISLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYD 342

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+      H YP+DWRTK
Sbjct: 343 LPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTK 401

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           KP IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 402 KPVIFRATPQWFASINKVRQDILDAIEETDF 432



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 199/374 (53%), Gaps = 38/374 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+      I   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDVIPEAELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +  E Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STIEHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V E    +LD+            
Sbjct: 751 DMTKLLAPILVHTAEEVWTHTPHVKE-ESVHLADMPKVVEVDQALLDK------------ 797

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
           W + + LR +VN+ LEVAR  K+IG SLEAKV +  +D   A+   +        + LQ+
Sbjct: 798 WNQFMALRDDVNRALEVARNNKVIGKSLEAKVVIGNNDNFKAAEFLQQF------EDLQQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQVEV  S  N              E      I +  A G KCERCWNY+ ++GS 
Sbjct: 852 LFIVSQVEVSDSVDNA-------------EAYQHGDIRIDHAVGEKCERCWNYTEELGSV 898

Query: 653 VEHPTLCSRCYEVL 666
            E   LC RC EV+
Sbjct: 899 GELEHLCPRCQEVV 912


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47.1|SYI_FUSNN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/390 (38%), Positives = 220/390 (56%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++ + GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYVNGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D+ + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDVYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQDDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  +  I ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/342 (41%), Positives = 211/342 (61%), Gaps = 46/342 (13%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYL-VEGK 624
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S            G Y   E  
Sbjct: 848 LYTEDNTLKEFIKE------NLELLKIVFIVSDLEVVDSA----------DGNYTDAEEI 891

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +K+ I ++ A+G KCERCW Y  ++G+  EHPTLC RC  VL
Sbjct: 892 EKLKIKIAHADGEKCERCWKYD-ELGTDSEHPTLCPRCAAVL 932


>gi|154250101|ref|YP_001410926.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769391|sp|A7HMY6.1|SYI_FERNB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|154154037|gb|ABS61269.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 913

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/391 (39%), Positives = 213/391 (54%), Gaps = 58/391 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL P+YE   ++VF  +   G +YRG KPV+W P+ RTALAEAE
Sbjct: 139 EFKRLGVKGDWEHPYITLTPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F+MV  P            D  + +WTTTPWT+PAN A+A++ + 
Sbjct: 199 IEYHD-HESPSIYVKFQMVDQP------------DTYVVIWTTTPWTIPANVAIALHPEY 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y  +++                  GN        + IVA  L+    ++ G +  + + 
Sbjct: 246 EYLKIKV------------------GNE-------YWIVADGLLQKFASETGIEFQVTEK 280

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LE     HP+ +R   V++  DY+T E GTG VHTAPGHG+EDY T LKY LPIL
Sbjct: 281 FLGKTLEGKLTKHPLYDRTS-VIVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNLPIL 339

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDDEGKFT+EAGK+ GL +  D N  VV+ L++  +LI      H YP+ WR K P +
Sbjct: 340 SPVDDEGKFTKEAGKYEGLKIW-DANKVVVEDLEKAGALIKFGKISHSYPHCWRCKGPVM 398

Query: 303 FRATEQWFASV--EGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRAT QWF SV     R   ++ I +VKW P           QE P +     R+W    
Sbjct: 399 FRATPQWFISVNKNNLRGKVLEQIKKVKWYPSWGENRITAMVQERPDWTISRQRVWGVPI 458

Query: 347 -VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 376
                    +V + P+V+   ++I ++ +GT
Sbjct: 459 PAVKCKSCDEVTLDPKVIEHFANIVKE-KGT 488



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 28/329 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   + + Y+ 
Sbjct: 608 YGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTENDILPYEK 667

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++AL +L+  ++ + + YE +++ K++    ++   +LS+ Y D+ KDRLY    
Sbjct: 668 LLPLDKWALGRLQKYIEQVTQYYEEFEYSKVYNATVKYCTTELSSIYLDILKDRLYVEAK 727

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTVL   L ++++++API+P  AE+ +Q  P           E V    WP 
Sbjct: 728 DSIYRRSAQTVLYYILEALIKILAPIMPFTAEEAYQESPL-------KKYESVHLENWPE 780

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           + +++       +  + ++L +R +V K LE AR+  +IG SL+A V +   ++ +   L
Sbjct: 781 VRKEF--INENLLEEFQQLLLVRDDVLKALENARSSDVIGHSLDAHVKIEPKNSEIGQLL 838

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            +       AD L+  FI+S+V +L    +G+   +             V + V  AEG 
Sbjct: 839 EKY------ADMLEDFFIVSKVSILNELSDGINGQL-------------VTVLVEHAEGQ 879

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC+RCW Y    G    HP  C RC  VL
Sbjct: 880 KCQRCWKYHPDTGKDENHPETCPRCSAVL 908


>gi|163790528|ref|ZP_02184957.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159874131|gb|EDP68206.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 746

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 203/329 (61%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+ PY+TL  EYE AQI VFG+M+ +GYIY+G KP++WSPSS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDYPYVTLTKEYEEAQIRVFGKMAEKGYIYKGLKPIYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GL++E   D    +WTTTPWT+P+N A+ VN    
Sbjct: 199 EYKDVK-SASIYVAFKVVDG----KGLIDE---DTSFVIWTTTPWTIPSNLAITVNPDYD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+V                       V+ D KK   +VA DL+ T+  E  W     I++
Sbjct: 251 YSV-----------------------VVADGKKY--VVAKDLIETVAQEIGWNQVETIQE 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L G +LE     HP+ +R   ++I GD++T E+GTGLVHTAPGHG +D++   KY L +
Sbjct: 286 -LKGKELELMTAQHPMYDR-TSLLILGDHVTLEAGTGLVHTAPGHGDDDFIVGQKYKLGV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVDD+G FT+EA    G+      N  + ++L+++ +L+    + H YP+DWRTKKP 
Sbjct: 344 LSPVDDKGCFTDEAPGLEGI-FYDKANKVITEWLEKEEALLKLNFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 403 IFRATPQWFASIDKFRGDILEAVEGVEWV 431



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 90/140 (64%), Gaps = 1/140 (0%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D+   
Sbjct: 604 PSKVIKQMGADIIRLWVSSVDTQADVRVSDEILKQVSEVYRKIRNTMRFLLANTDDYDPS 663

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N ++++DL  +D+Y + +L  +V+ +   YE Y+F  I+Q+I  F  VDLS FY D AK
Sbjct: 664 VNKVAFEDLRSVDKYLMIRLNQLVEKVEVHYEKYEFSSIYQLINNFCTVDLSQFYLDFAK 723

Query: 450 DRLYTGGTTSFTRRSCQTVL 469
           D +Y     S+ RR+ QTV 
Sbjct: 724 DVVYIEAEDSYERRAMQTVF 743


>gi|393201810|ref|YP_006463652.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
 gi|327441141|dbj|BAK17506.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 921

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 196/331 (59%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+R GV  DW NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 138 SQFRRLGVRGDWANPYITLKPEFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +      + G++     D    +WTTTPWT+PAN  ++VN +
Sbjct: 198 EIEYKDVE-SYSIYVAFGI----KDSKGVVP---ADAKFVIWTTTPWTIPANLGISVNPE 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y VVE                               IVA DL+  L A +G + V I 
Sbjct: 250 FTYVVVETNGSK-------------------------YIVAKDLLEKLSATFGWEDVQIV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + + G  L+     HP+  R   V++G D++T E+GTG VHTAPGHG++DY    +YGL 
Sbjct: 285 QEVQGEQLDMIVAEHPIYKRDSLVMVG-DHVTAEAGTGCVHTAPGHGEDDYQIGKRYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVD+ G +T EA  F GL      N  V++ L E+ +L+    + H YP+DWRTKKP
Sbjct: 344 ILSPVDNGGCYTNEAPGFEGL-FYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RAT QWFASVE FR   +DA+   ++ P
Sbjct: 403 VIYRATPQWFASVEMFRNELLDAVKATEFTP 433



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 196/334 (58%), Gaps = 33/334 (9%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD++R+WV+SVDYTGDV I   +L+Q+S+ YRK+R TLR+L GN+ D+    + ++Y+
Sbjct: 611 YGADIIRMWVASVDYTGDVRISMDMLKQVSETYRKVRNTLRFLHGNVTDFNETTDRVAYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +DQY   +L+++VK IRE+Y+ Y F  ++  +  F+ ++LS+FY D+AKD +Y  G
Sbjct: 671 ELREMDQYMYMRLQDVVKTIREAYDRYDFSTVYTTVNNFVAIELSSFYLDIAKDVVYIEG 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF---AYTLEDGSAAEFVFES 513
           T +  RR+ QTV+   L+++V+++ PI+PH  E++W  + F     +++     E V ++
Sbjct: 731 TDNKDRRAMQTVMYDTLMALVKLLTPIIPHTTEELWSYIEFDGKPQSVQLTDFPEVVEQA 790

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            +  L  KW            K++ +R EV K LE AR  K IG SLEAK+ ++ D    
Sbjct: 791 NFAELRTKWV-----------KVIAVRNEVLKALEEARNAKTIGKSLEAKISVYADS--- 836

Query: 574 ASRLREMCTAKHDADT-LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
                E     +DA+    ++ I+SQ  +  S  N          E LV   DK  + V 
Sbjct: 837 -----ETVELLNDANIDFAQLSIVSQFVIAGSKENA-------PAEALV--LDKTALVVE 882

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +A+G KCERCW  S  VG+   HPTLC RC +V+
Sbjct: 883 KADGEKCERCWTISETVGASENHPTLCKRCADVV 916


>gi|421145637|ref|ZP_15605492.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme
           ATCC 51190]
 gi|395487961|gb|EJG08861.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme
           ATCC 51190]
          Length = 933

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 219/390 (56%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QTNKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  + AI ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    AE +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----AESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNSDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNTLKEFIKE------NLELLETVFIVSDLEVVNSADENFTD---------TEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-ELGSDSEHPTLCPRCAAVL 932


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 202/330 (61%), Gaps = 37/330 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FK+ GV  DW NPYLTLDP++EA QI VFG+M  +GYIY+G KP++WSPSS +ALAEA
Sbjct: 138 ADFKKLGVIGDWENPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLKPIYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY + H S SIY  F +VS      G++ +        +WTTTPWT+PAN  +AV+  
Sbjct: 198 EIEYRD-HTSPSIYVGFELVSE----DGVVEK---GTKFVIWTTTPWTLPANLGIAVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
            +Y  V++     G++                      ++A + V  L  ++G     + 
Sbjct: 250 FEYQEVKVN----GEN---------------------YLLAKERVNFLAEQFGWENFELG 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL-KYGL 239
           KT+ G +LE     HP  +R   V++  DY+T +SGTGLVHTAPGHG +D++    KY L
Sbjct: 285 KTVLGKELEYLLCQHPFLDRTSTVILA-DYVTLDSGTGLVHTAPGHGVDDFIVGQGKYKL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +LSPVD++G  TEEAG+F+G  V  D N  ++ +L E  +L+ +E   H YP+DWR+KK
Sbjct: 344 GVLSPVDNQGNLTEEAGQFAGQFVF-DANKNIIAHLAETGALLKQENITHSYPHDWRSKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFR+T QWF SV+ FR   +DA+ + K+
Sbjct: 403 PIIFRSTPQWFCSVDAFRSELLDAVDRTKF 432



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 179/332 (53%), Gaps = 41/332 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 395
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL +    N    +SY
Sbjct: 614 GAEIIRLWSASVDYTQDVRISNDILKQVSETYRKIRNTFRFLLGNLFNGSFDNRTDLLSY 673

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           D+L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 DELEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV-FESK 514
              S  R S  TVL   L   VR++APIL   AE+V+ N+P+    ED  +     F +K
Sbjct: 734 AEKSHKRLSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPY----EDAESVHLTDFPAK 789

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             + D             W K+LE+R +VNK LE +R  K+IG SLEA V ++++D+ + 
Sbjct: 790 NLIDDAALEA-------KWDKLLEVRDDVNKALEESRNEKVIGKSLEAAVEIYSNDSEVV 842

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L  +       D L ++FI+S VEV  +        + Y         D   + V++A
Sbjct: 843 ELLNSV-------DNLHQLFIVSSVEVKEND------GVTY---------DLATVKVTKA 880

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG +CERCWN   +V        LC RC  +L
Sbjct: 881 EGHRCERCWNIVEEVN----EEGLCPRCASIL 908


>gi|414160468|ref|ZP_11416736.1| isoleucyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
 gi|410878366|gb|EKS26251.1| isoleucyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 915

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 201/330 (60%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVNGDFNDPYITLKPEYEAAQIRLFGEMADRGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++E   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SPSIYVAFDVKDG----KGVVDE---DAKFIIWTTTPWTLPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EA-KWGTKLV-I 179
           +Y     Q  + G+                       +V +DLV  + EA  W    + +
Sbjct: 250 KYG----QYKVNGEK---------------------YVVGTDLVEEVAEALDWDKDAIEL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G ++TT++GTG VHTAPGHG++DY+   KYGL
Sbjct: 285 EKIFTGKELEYVETQHPFVDR-VSLVINGLHVTTDAGTGAVHTAPGHGEDDYIVGQKYGL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP+DD+G FTEE G+F G+      N AV   L E  SL+  +   H YP+DWRTKK
Sbjct: 344 PVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLKENGSLLKLQFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 403 PVIFRATPQWFASISKVRQDILDAIEETHF 432



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/374 (38%), Positives = 208/374 (55%), Gaps = 38/374 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 574 RGQSPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQIVKQKGADIARLWVSSVDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q +D+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTADVYRKIRNTLRFMLGNVNDFNPSTDALDEADLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           NI + Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 NIIKHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKQDSPKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP--VLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW  +P  +  E+      + E   P   L EKW TF       
Sbjct: 751 DMTKLLAPILAHTAEEVWSYIP--HVEEESVHLANMPEVVEPDTALLEKWNTF------- 801

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
               ++LR +VN+ LE AR  K+IG SLEAKV + +++   A+   +      D + LQ+
Sbjct: 802 ----MKLRDDVNRALESARNDKVIGKSLEAKVIIGSNEHFDATSFLK------DFENLQQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQVEV     +G      Y G+          I V  A+G KCERCWNYST++GS 
Sbjct: 852 LFIVSQVEVEDKVEDGTEY---YHGD----------IKVVHADGEKCERCWNYSTELGSA 898

Query: 653 VEHPTLCSRCYEVL 666
                LC RC  V+
Sbjct: 899 NGLDHLCPRCQAVV 912


>gi|336395774|ref|ZP_08577173.1| isoleucyl-tRNA synthetase [Lactobacillus farciminis KCTC 3681]
          Length = 925

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 204/332 (61%), Gaps = 36/332 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW++PY+T   E+E A+++VFG+M  +GYIYRGKKPV+WSPSS + LAE
Sbjct: 136 MAGFKRLGVSADWDHPYITYQKEFEEAEVKVFGEMVDKGYIYRGKKPVYWSPSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S SI+  F++        G++++   D    +WTTTPWT+P+N A+ VN 
Sbjct: 196 AEVEYKDIK-SPSIFVAFKVRDG----KGVVDD---DASFIIWTTTPWTIPSNKAICVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
           K  YA V                         D KK   +VA + +  ++ + G + V I
Sbjct: 248 KFIYAEVNA-----------------------DGKKY--VVAQERIQYVQEELGWENVEI 282

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT  GS+LE     HP  +++  ++I G+++T + GTGLVHTAPG G +D+V  +KY L
Sbjct: 283 LKTFKGSELEYVTATHPFYDQES-LLILGNHVTLDDGTGLVHTAPGFGADDFVVGMKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+ SP+D +GKFT+E  ++ G+    D N  + + + E  SL+    + H YP+DWRTKK
Sbjct: 342 PVFSPIDAQGKFTDEVPEYQGV-FYDDANKLITERMKENGSLLKLSFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS++ FRQ  +DAI ++ + P
Sbjct: 401 PVIFRATPQWFASIDKFRQQILDAIDKIDFKP 432



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 36/334 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA+++RLWV+SVD + DV +     +Q+S+ YRK+R T+R++L N  D+    N++SYD
Sbjct: 611 FGAEIIRLWVASVDSSSDVSVSVDSFKQVSETYRKIRNTIRFMLANTTDFDPETNAVSYD 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL   D+Y   +L N+VK +   Y+ Y F  + + +  FI+ ++S FY D AKD +Y   
Sbjct: 671 DLRPEDKYIKVKLNNLVKEVLSDYDKYDFADVAKNVVSFIVNEMSTFYLDFAKDVVYIDA 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             + +RRS QTV+   ++ + +++ PILPH  E VW+ L            EFV  ++ P
Sbjct: 731 EDAHSRRSMQTVIYETVVKLAKLLTPILPHTMEQVWEYLK--------EPEEFVQLAEMP 782

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++E      + +   W   ++ R  V K LEVAR  KLIG SLEAKV +   D  L + 
Sbjct: 783 AVEEIPDEAEIQKD--WQVFMDFRDNVLKSLEVARADKLIGKSLEAKVTVHPSD-ELKAV 839

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG---VSR 633
           L ++ +         ++ I+SQ E++ + P               E  DK  +    V +
Sbjct: 840 LDKIDS------NFGQLLIVSQFELVDAAP---------------ENADKYELADVLVQK 878

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           AEG  C+RC    T VGS   +PT C+RC +++A
Sbjct: 879 AEGEVCQRCRMIKTDVGSDSNYPTFCARCAKIVA 912


>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|417907106|ref|ZP_12550882.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
 gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|341596737|gb|EGS39328.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
          Length = 916

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 198/330 (60%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFNV----KDDKGVVD---SDAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  +EG                        IVA  L  T+    G     + +
Sbjct: 250 KYG----QYNVEGQK---------------------FIVAQALSETVADALGWDKDTIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI GD++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEYVEAQHPFLDR-TSLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAIEETNF 432



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 205/372 (55%), Gaps = 34/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  ++L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENELLDVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + +++APIL H AE+VW + P           E V  +  P + E  R      +  W 
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLADMPEVVEVDREL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
            +++LR +VN+ LE AR  K+IG SLEAKV +  +++  A+   +      + + LQ++F
Sbjct: 800 TLMDLRDDVNRALEQARNEKVIGKSLEAKVVIGNNESFKAAEFLQ------EFNDLQQLF 853

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVEV+ S  NG      Y             I +  AEG KCERCWNYS ++GS  E
Sbjct: 854 IVSQVEVVDSVENG--ETYKYGD-----------IRIEHAEGEKCERCWNYSDELGSVGE 900

Query: 655 HPTLCSRCYEVL 666
              LC RC EV+
Sbjct: 901 LDHLCPRCQEVV 912


>gi|334133962|ref|ZP_08507497.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
 gi|333608470|gb|EGL19767.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
          Length = 920

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 194/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW++PY+TL PEYEA QI +FG+M  +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGIRGDWDHPYITLQPEYEAEQIRLFGEMVKKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S SIY  F +        G L +   D    +WTTTPWT+PAN  ++V+    
Sbjct: 200 EYKE-KTSPSIYVAFDVAEG----QGKLPQ---DAAFVIWTTTPWTLPANLGISVHPDFT 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVVE+                          K +++    L    +A   T   +  T+
Sbjct: 252 YAVVEVSG------------------------KKYVLAEGLLESAAKAIGWTDYSMVSTV 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+LEN    HP  +R+  V++ G+++T E+GTG VHTAPGHG++D++   KY + +L 
Sbjct: 288 KGSELENVTCKHPFYDRESLVML-GEHVTLEAGTGCVHTAPGHGEDDFIVGQKYKIGVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G FT EA    G+     GN  ++++L+    L+      H+Y +DWRTKKP I+
Sbjct: 347 PVDDQGHFTAEAPGLEGV-FYEKGNKTILEWLENSGHLLHASSINHQYAHDWRTKKPVIY 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++ FR   ++ I ++KW P
Sbjct: 406 RATEQWFASIDKFRDEMLEEIKKIKWTP 433



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 195/340 (57%), Gaps = 31/340 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWVSSVDY  DV I   +L Q++++YRK+R TLR+LLGNL  +  V
Sbjct: 606 PSQVCNKLGADILRLWVSSVDYQSDVRISDNILSQITEVYRKIRNTLRFLLGNLSQFDPV 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + + +  +  +DQYA+ +L  + + + ++Y++Y+F  ++Q +  F  V++S+FY D+ K
Sbjct: 666 KDRVDFAQMSELDQYAVIRLNRMTEKVTKAYDAYEFHVVYQAVHHFCAVEMSSFYLDIIK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSAA 507
           DRLY        R++ QTVL   LL+I ++IAPILPH A++VW+ +P     +++     
Sbjct: 726 DRLYADAADDSARKASQTVLYDALLAITKLIAPILPHTADEVWKYIPGVELDSVQISELP 785

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E   +     L++KW  F           L +R EV K LE AR  K IG+SL A V L+
Sbjct: 786 EIRTDVYNQELEQKWDGF-----------LNIRDEVLKALEEARKNKTIGNSLSAAVDLY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             DA+      ++ +     DTL   FI+S      +T +      P  G Y  E +D +
Sbjct: 835 PSDAAF-----KLLSGFDKLDTL---FIVS-----AATLHNPSEKAP-EGSY--EAQD-L 877

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + VS AEG KCERCW  + +VG   EHPTLC+RC EV++
Sbjct: 878 AVQVSVAEGEKCERCWIVTPEVGQNKEHPTLCARCAEVVS 917


>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|385784645|ref|YP_005760818.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
 gi|418414320|ref|ZP_12987535.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
 gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|339894901|emb|CCB54202.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
 gi|410876927|gb|EKS24824.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
          Length = 916

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 198/329 (60%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G+++E   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA  W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAEALADEVAEALDWDKNHIKLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KYGLP
Sbjct: 286 KEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G+F G+      N AV   L E+ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 199/372 (53%), Gaps = 34/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + +++APIL H AE+VW + P           E V  +  P + +  R      +  W 
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLADMPEVVDVDRAL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
           + + LR +VN+ LE AR  K+IG SLEAKV +  +D   A+              L ++F
Sbjct: 800 QFMYLRDDVNRALEAARNDKVIGKSLEAKVIIGNNDNYNATDFLAQFA------DLHQLF 853

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVEV+ S  NG+       G+          I +  A+G KCERCWNYS  +GS  E
Sbjct: 854 IVSQVEVVDSVDNGITYQ---HGD----------IRIEHAQGDKCERCWNYSEHLGSVGE 900

Query: 655 HPTLCSRCYEVL 666
              LC RC EV+
Sbjct: 901 LDHLCPRCQEVV 912


>gi|418637502|ref|ZP_13199821.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
 gi|374838748|gb|EHS02283.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
          Length = 916

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 198/329 (60%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G+++E   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA  W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAEALADEVAEALDWDKNHIKLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KYGLP
Sbjct: 286 KEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G+F G+      N AV   L E+ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 201/373 (53%), Gaps = 36/373 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + +++APIL H AE+VW + P           E V  +  P + +  R      +  W 
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLADMPEVVDVDRAL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHDADTLQRI 593
           + + LR +VN+ LE AR  K+IG SLEAKV +  +D  ++   L +          L ++
Sbjct: 800 QFMYLRDDVNRALEAARNDKVIGKSLEAKVIIGNNDNYNVTDFLAQFA-------DLHQL 852

Query: 594 FIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFV 653
           FI+SQVEV+ S  NG+       G+          I +  A+G KCERCWNYS  +GS  
Sbjct: 853 FIVSQVEVVDSVDNGITYQ---HGD----------IRIEHAQGDKCERCWNYSEHLGSVG 899

Query: 654 EHPTLCSRCYEVL 666
           E   LC RC EV+
Sbjct: 900 ELDHLCPRCQEVV 912


>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 916

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 198/329 (60%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G+++E   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA  W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAEALADEVAEALDWDKNHIKLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KYGLP
Sbjct: 286 KEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAPGHGEDDYIVGQKYGLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G+F G+      N AV   L E+ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLSFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 199/372 (53%), Gaps = 34/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + +++APIL H AE+VW + P           E V  +  P + +  R      +  W 
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLADMPEVVDVDRAL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
           + + LR +VN+ LE AR  K+IG SLEAKV +  +D    +      +       L ++F
Sbjct: 800 QFMYLRDDVNRALEAARNDKVIGKSLEAKVIIGNNDNYNVTDFLAQFS------DLHQLF 853

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVEV+ S  NG+       G+          I +  A+G KCERCWNYS  +GS  E
Sbjct: 854 IVSQVEVVDSVDNGIAYQ---HGD----------IRIEHAQGDKCERCWNYSEHLGSVGE 900

Query: 655 HPTLCSRCYEVL 666
              LC RC EV+
Sbjct: 901 LDHLCPRCQEVV 912


>gi|357037198|ref|ZP_09098998.1| Isoleucyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
 gi|355361363|gb|EHG09118.1| Isoleucyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
          Length = 933

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 154/358 (43%), Positives = 211/358 (58%), Gaps = 41/358 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TL P +EA QI VFG+M+ +GYIY+G KPV+W  +  TALAEAE+
Sbjct: 140 FKRLGVRGDWEHPYVTLMPHFEARQIGVFGEMAKRGYIYKGLKPVYWCATCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E   +  + +WTTTPWT+ AN A+ ++ +  
Sbjct: 200 EYADKK-SPSIYVKFPVRDG----KGILPE--ENTYVVIWTTTPWTLIANLAITLHPEFD 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y ++E    L+G +   A          K+ K+ F          L      +  I    
Sbjct: 253 YILME----LDGQNMLMA----------KELKEAF----------LHETGLPEGSIISQY 288

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+LE     HP  +R   V+I GD++T E+GTG VHTAPGHG EDY+  LKY LPILS
Sbjct: 289 KGSELEGIVCSHPFVDRNS-VLILGDHVTLEAGTGCVHTAPGHGHEDYLVGLKYNLPILS 347

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD  G+FT+EAG+F+G  +  + N  ++  L E  +LI  +   H+YP+ WR KKP  F
Sbjct: 348 PVDGRGRFTDEAGQFAG-QLYHEANDGILDTLRETGALIKSDKISHQYPHCWRCKKPVFF 406

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQ 361
           RATEQWFAS++GFRQAA+D I +V+W+     PG+G D +   V++    GD  I  Q
Sbjct: 407 RATEQWFASIDGFRQAALDEIDKVRWI-----PGWGRDRIHNMVAN---RGDWCISRQ 456



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 195/329 (59%), Gaps = 22/329 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GD+ +   +L+Q+++ YRK+R T R++LGNL+D+    +S+ Y+ 
Sbjct: 618 GADILRLWVSSADYRGDLAVSQNILKQLTEAYRKIRNTCRFMLGNLYDFTPEQDSVPYEK 677

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P +D+YA+ +L  +++ + E+Y +Y+F  ++  I  F  VD+SN Y D+ KDRLY    
Sbjct: 678 MPELDRYAMLKLHRLIERVLEAYRNYEFHVVYHAIHHFCTVDMSNQYLDIIKDRLYCEKA 737

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            +  RRS QTV+   L ++VR++APIL    E++W+ +P   T++  ++ +    +  P 
Sbjct: 738 DAELRRSAQTVMYQALHALVRLLAPILAFTTEEMWRYVP--KTVDAPASVQL---TDMPE 792

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D+++    + E   WG+++++R  V + LE AR  K+IG+SLEA+V+L+ DD     ++
Sbjct: 793 PDDRYVDAALEEK--WGRLMKIRGLVTRALEKARQEKVIGNSLEARVHLYADD-----QM 845

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            ++    +    L  +FI+S V     T + L      + E  V+    + +GVSRA G 
Sbjct: 846 TDLIKPYY--QDLAVLFIVSGV-----TMHALAEKTAAAME--VDEIPGLAVGVSRAAGV 896

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC RCW Y   VG    HP  C RC  VL
Sbjct: 897 KCSRCWMYHEDVGQNTTHPETCPRCATVL 925


>gi|283770255|ref|ZP_06343147.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460402|gb|EFC07492.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 917

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATSQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 192/340 (56%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y    +V     
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIV----- 877

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 878 ----IKHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|419759413|ref|ZP_14285714.1| isoleucyl-tRNA synthetase [Thermosipho africanus H17ap60334]
 gi|407515626|gb|EKF50364.1| isoleucyl-tRNA synthetase [Thermosipho africanus H17ap60334]
          Length = 910

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 216/387 (55%), Gaps = 57/387 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YRG KPV+W P+ +TALAEAE
Sbjct: 139 QFKRLGVRGDWDNPYLTLDPKYETHILNIFKTLVKNGNVYRGNKPVYWCPTCKTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F+++       G  N ++      +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 VEYHD-HSSPSIYVKFKLI-------GEENTYV-----VIWTTTPWTLPANVAIAVHPEY 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  +++    +G+                     + IVA  L+    A+      + + 
Sbjct: 246 DYVKIKV----DGE---------------------YWIVAEGLLNKFAAETEINYEVVEK 280

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE  +  HP  +R+  +V+  DY+T E GTG VHTAPGHG EDY+T LKY LP+L
Sbjct: 281 FKGKDLEYKKAKHPFIDRESLIVLA-DYVTLEDGTGCVHTAPGHGAEDYLTGLKYNLPVL 339

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV++EG FTEEAGK++GL +  D N  +++ L++  +LI  +  EH YP+ WR K P I
Sbjct: 340 SPVNEEGIFTEEAGKYAGLKIW-DANKVIIEDLEKLGALIKTQKIEHSYPHCWRCKNPII 398

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSV 350
           FRAT QWF SV+    R+  ++ I +V+W P           +E P +     R+W + +
Sbjct: 399 FRATPQWFISVDKNNLREKVLEEIKKVEWHPKWGENRITAMVKERPDWTISRQRVWGTPI 458

Query: 351 -----DYTGDVMIGPQVLRQMSDIYRK 372
                 + G+V I  +V+     I  K
Sbjct: 459 PAIKCKHCGEVFIDEKVIDNFITIVEK 485



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 184/337 (54%), Gaps = 33/337 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  ++Y+K+R TLR+LLGNL D+   
Sbjct: 601 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVEVYKKIRNTLRFLLGNLSDFTKN 660

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + + +D L  +D++AL +L+ ++  + E YE Y+F K++ +I R+  V+LS  Y D+ KD
Sbjct: 661 DLVEFDKLLPLDKWALGRLQEVISQVTEHYEKYEFSKVYSLINRYCTVELSATYLDILKD 720

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RRS QTV+   L ++++++AP+L    E+ +Q  P           E V
Sbjct: 721 RLYVEAKDSIYRRSAQTVMFYILDALIKMLAPVLVFTTEEAYQLSPL-------KEFETV 773

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILEL-RTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
               WP + +++    + E +   KIL + R +V K LE AR   +IG SL+AKV L   
Sbjct: 774 HLEYWPQVRKEFVDEKLMEEF---KILFMVRDDVLKALENARKNDIIGHSLDAKVTLNGV 830

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +  + + L +        D L+ IFI+SQVE+      G   N                +
Sbjct: 831 NEQINNVLVKY------KDYLEEIFIVSQVEIGEGKVKGEFAN----------------V 868

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V +A G KC+RCW YS + G   E+P  C RC  VL
Sbjct: 869 SVEKASGEKCQRCWKYSEETGKDEEYPNTCPRCAAVL 905


>gi|358054989|ref|ZP_09147517.1| isoleucyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
 gi|357256723|gb|EHJ07055.1| isoleucyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
          Length = 916

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 197/330 (59%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNDPYITLQPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++   PD    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDG----KGIVD---PDAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVASDLVPTLEAKWGTK-LVI 179
            Y    +                       D KK  I   +A  +   L+  W  + L +
Sbjct: 250 NYGQYNV-----------------------DGKKYIIAEALADSVADALD--WDKETLKL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP    +  +VI GD++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEYTGKELEYVVTQHPFLELES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYEL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP+DD+G FTEE G F G+      N AV + L E+ +L+  E   H YP+DWRTKK
Sbjct: 344 PVISPIDDKGVFTEEGGPFEGM-FYDKANKAVTELLTEKGALLKLEFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  +DAI    +
Sbjct: 403 PVIFRATPQWFASISKVRQDILDAIDNTNF 432



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/342 (40%), Positives = 191/342 (55%), Gaps = 39/342 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+  +DL  +D+Y L +L     N   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPENDLLEVDRYLLNRLREFTANTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     +  L D 
Sbjct: 725 KDILYIEERDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEQSVHLADM 784

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
                V E    +LD KW TF           + LR +VN+ LE AR  K+IG SLEAKV
Sbjct: 785 PK---VVEVDQDLLD-KWHTF-----------MSLRDDVNRALENARNDKVIGKSLEAKV 829

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            + ++D   A+       A      L ++FI+SQVEV+    NG             E  
Sbjct: 830 TIGSNDNFNAAEFLTQFEA------LHQLFIVSQVEVVDHVDNGTT----------YEHG 873

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           D   I ++ A+G KCERCWNYS ++GS  E   LC RC EV+
Sbjct: 874 D---IVIAHADGEKCERCWNYSEELGSVGELTHLCPRCQEVV 912


>gi|348674400|gb|EGZ14219.1| hypothetical protein PHYSODRAFT_511967 [Phytophthora sojae]
          Length = 1059

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 201/349 (57%), Gaps = 39/349 (11%)

Query: 4   FKRYGVWADWNNP-----YLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTAL 58
           F+R+GV ADW+       YLT+ PEYEA Q +V  +M   G I+RG KPV+WSPSSRTAL
Sbjct: 149 FERWGVLADWSGADAESVYLTMAPEYEARQYDVLKKMVHDGLIFRGFKPVYWSPSSRTAL 208

Query: 59  AEAELEYPEGHVSRSIYAVFRMVS----APPSTSGLLNEFLPDLGLAVWTTTPWTVPANA 114
           AEAELEY + HVS++ Y  FR  S    A    + +L ++   L   VWTTTPWT+P+N 
Sbjct: 209 AEAELEYQDDHVSQAAYVKFRFASMGSNASKEMASVLEKYGDKLSAVVWTTTPWTIPSNQ 268

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL---EA 171
           A+ VNA+L Y VV                  RP     D   +      +   T+   +A
Sbjct: 269 ALCVNAELDYVVV------------------RPRGADSDACYLIASALQESFATMLKGDA 310

Query: 172 KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
           +   +L + +TL G+DLE   + HP+ NR   VV+ G+++TT++GTG+VHTAPGHGQ+DY
Sbjct: 311 ETDVELEVLETLKGADLEGAHFTHPLVNRDA-VVLVGEHVTTDAGTGVVHTAPGHGQDDY 369

Query: 232 VTSLKYGLP------ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIME 284
              + +         IL PVD +G FT EAG+   GL V+G+GN AV+  L    +L+  
Sbjct: 370 FAWMAHHSKPGEHPDILCPVDADGCFTAEAGQGLQGLSVVGEGNTAVIDLLKSSGNLLSI 429

Query: 285 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
             Y H+YPYDWRTK+P I RAT QWFA ++         +   V+ VPP
Sbjct: 430 NEYHHRYPYDWRTKQPVILRATAQWFARLDALHARGKRVLEDSVQMVPP 478



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 189/358 (52%), Gaps = 20/358 (5%)

Query: 330  VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
            V   + P YG DVLR WV++ DYTGDV IGP V+ + SD  RK+R T R+LLGNL D+  
Sbjct: 702  VKQMKVPAYGVDVLRFWVATTDYTGDVSIGPGVVGKASDALRKVRNTARFLLGNLQDFDP 761

Query: 389  VGNSISYDDLPM-IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              +++ +D +   +D+Y L +L ++ +++  +Y+++ F +    +  FI  DLS FY + 
Sbjct: 762  AQHAVPHDKMQFSLDRYMLHELNSLAESVTAAYDAFAFNRAQHALSHFISTDLSAFYMEA 821

Query: 448  AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV---W-QNLPFAYTLED 503
             KDRLY     S TRRS QTVL   L ++ R +AP++PH AED+   W   L     LE+
Sbjct: 822  TKDRLYCDAADSQTRRSAQTVLWLSLQALTRALAPVVPHTAEDIRLHWVSQLQGEIPLEE 881

Query: 504  GSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
               + F  E  W    E+W+   +     W  I +LR EVN+V+E  R    +GS LE  
Sbjct: 882  VPGSVF-LEEGWMPSAEQWKNDELARD--WTAIRQLRFEVNRVVEQMRQAGRVGSQLECN 938

Query: 564  VYLFT--DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYL 620
            VY+     D  +A  L  +  +  +   L+ + + S VEV+ S T          S +  
Sbjct: 939  VYVVASESDPRVADFLAPLANSSSE---LEDVLLCSSVEVVASETEIESAEQFKASCQLA 995

Query: 621  VEGKD---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            +   D   +V + ++ A+G KC RCW Y+ +V +      LC RC +   ++ +  +A
Sbjct: 996  MGPNDAPMEVKLVLTPAKGHKCPRCWKYAPEVDA--AETQLCLRCAQATDLRSVSDLA 1051


>gi|217076920|ref|YP_002334636.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|254782447|sp|B7IGT1.1|SYI_THEAB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|217036773|gb|ACJ75295.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 910

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 216/387 (55%), Gaps = 57/387 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YRG KPV+W P+ +TALAEAE
Sbjct: 139 QFKRLGVRGDWDNPYLTLDPKYETHILNIFKTLVKNGNVYRGNKPVYWCPTCKTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F+++       G  N ++      +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 VEYHD-HSSPSIYVKFKLI-------GEENTYV-----VIWTTTPWTLPANVAIAVHPEY 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  +++    +G+                     + IVA  L+    A+      + + 
Sbjct: 246 DYVKIKV----DGE---------------------YWIVAEGLLNKFAAETEINYEVVEK 280

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE  +  HP  +R+  +V+  DY+T E GTG VHTAPGHG EDY+T LKY LP+L
Sbjct: 281 FKGKDLEYKKAKHPFIDRESLIVLA-DYVTLEDGTGCVHTAPGHGAEDYLTGLKYNLPVL 339

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV++EG FTEEAGK++GL +  D N  +++ L++  +LI  +  EH YP+ WR K P I
Sbjct: 340 SPVNEEGIFTEEAGKYAGLKIW-DANKVIIEDLEKLGALIKTQKIEHSYPHCWRCKNPII 398

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSV 350
           FRAT QWF SV+    R+  ++ I +V+W P           +E P +     R+W + +
Sbjct: 399 FRATPQWFISVDKNNLREKVLEEIKKVEWHPKWGENRITAMVKERPDWTISRQRVWGTPI 458

Query: 351 -----DYTGDVMIGPQVLRQMSDIYRK 372
                 + G+V I  +V+     I  K
Sbjct: 459 PAIKCKHCGEVFIDEKVIDSFITIVEK 485



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 33/337 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  ++Y+K+R TLR+LLGNL ++   
Sbjct: 601 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVEVYKKIRNTLRFLLGNLSNFTKN 660

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + + +D L  +D++AL +L+ ++  + E YE Y+F K++ +I R+  V+LS  Y D+ KD
Sbjct: 661 DLVEFDKLLPLDKWALGRLQEVISQVTEHYEKYEFSKVYSLINRYCTVELSATYLDILKD 720

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  RRS QTV+   L ++++++AP+L    E+ +Q  P           + V
Sbjct: 721 RLYVEAKDSIYRRSAQTVMFYILDALIKMLAPVLVFTTEEAYQLSPL-------KEFDTV 773

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILEL-RTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
               WP + +++    + E +   KIL + R +V K LE AR   +IG SL+AKV L   
Sbjct: 774 HLEYWPQVRKEFVDEKLMEEF---KILFMVRDDVLKALENARKNDIIGHSLDAKVTLNGV 830

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +  + + L +        D L+ IFI+SQVE+      G   N                +
Sbjct: 831 NEQINNVLVKY------KDYLEEIFIVSQVEIGEGKVKGEFAN----------------V 868

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V +A G KC+RCW YS + G   E+P  C RC  VL
Sbjct: 869 SVEKASGEKCQRCWKYSEETGKDEEYPNTCPRCAAVL 905


>gi|384549949|ref|YP_005739201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 917

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    I                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNING----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|406664684|ref|ZP_11072459.1| Isoleucine--tRNA ligase [Bacillus isronensis B3W22]
 gi|405387532|gb|EKB46956.1| Isoleucine--tRNA ligase [Bacillus isronensis B3W22]
          Length = 921

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 145/331 (43%), Positives = 196/331 (59%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+R GV  DW NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEA
Sbjct: 138 SQFRRLGVRGDWANPYITLKPEFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +      + G++     D    +WTTTPWT+PAN  ++VN +
Sbjct: 198 EIEYKDVE-SYSIYVAFGI----KDSKGVVP---ADAKFVIWTTTPWTIPANLGISVNPE 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y VVE                               IVA DL+  L A +G + V I 
Sbjct: 250 FTYVVVETNGSK-------------------------YIVAKDLLEKLSATFGWEDVQIV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + + G  L+     HP+  R   V++G D++T ++GTG VHTAPGHG++DY    +YGL 
Sbjct: 285 QEVQGEQLDMIVAEHPIYKRDSLVMVG-DHVTADAGTGCVHTAPGHGEDDYQIGKRYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVD+ G +T EA  F GL      N  V++ L E+ +L+    + H YP+DWRTKKP
Sbjct: 344 ILSPVDNGGCYTNEAPGFEGL-FYEKANPVVIEKLKEENALLHVSKFTHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RAT QWFASVE FR   +DA+   ++ P
Sbjct: 403 VIYRATPQWFASVEMFRDELLDAVKATEFTP 433



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 196/334 (58%), Gaps = 33/334 (9%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD++R+WV+SVDYTGDV I   +L+Q+S+ YRK+R TLR+L GN+ D+    + ++Y+
Sbjct: 611 YGADIIRMWVASVDYTGDVRISMDMLKQVSETYRKVRNTLRFLHGNVTDFNETTDRVAYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +DQY   +L+++VK IRE+Y+ Y F  ++  +  F+ ++LS+FY D+AKD +Y  G
Sbjct: 671 ELREMDQYMYMRLQDVVKTIREAYDRYDFSTVYTTVNNFVAIELSSFYLDIAKDVVYIEG 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF---AYTLEDGSAAEFVFES 513
           T +  RR+ QTV+   L+++V+++ PI+PH  E++W  + F     +++     E V ++
Sbjct: 731 TDNKDRRAMQTVMYDTLMALVKLLTPIIPHTTEELWSYIEFDGKPQSVQLTDFPEVVEQA 790

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            +  L  KW            K++ +R EV K LE AR  K IG SLEAK+ ++ D    
Sbjct: 791 NFAELRTKWV-----------KVIAVRNEVLKALEEARNAKTIGKSLEAKISVYADS--- 836

Query: 574 ASRLREMCTAKHDADT-LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
                E     +DA+    ++ I+SQ  +  S  N          E LV   DK  + V 
Sbjct: 837 -----ETVELLNDANIDFAQLSIVSQFVIAGSKENA-------PAEALV--LDKTALVVE 882

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +A+G KCERCW  S  VG+   HPTLC RC +V+
Sbjct: 883 KADGEKCERCWTISETVGASENHPTLCKRCADVV 916


>gi|365904412|ref|ZP_09442171.1| isoleucyl-tRNA synthetase [Lactobacillus versmoldensis KCTC 3814]
          Length = 926

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 197/332 (59%), Gaps = 36/332 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV ADW+NPY+T  PE+E  +++VFG+M  +GYIYRGKKPV+WSPSS + LAE
Sbjct: 136 MDGFKRLGVSADWDNPYITYQPEFEKEEVKVFGEMVDKGYIYRGKKPVYWSPSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S SI+  F++         LL+    D    +WTTTPWT+P+N A+ VN 
Sbjct: 196 AEIEYKDIK-SPSIFVAFKVRDG----KDLLDN---DTSFIIWTTTPWTIPSNEAICVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
           K  Y  V+I +                     D KK   +VA D +  L+   G + V I
Sbjct: 248 KFDY--VQINA---------------------DGKKY--VVAEDRISFLKETLGWENVEI 282

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   G+DLE     HP+ + Q  ++I G+++T + GTGLVHTAPG G +D+V  +KY L
Sbjct: 283 LKEFKGTDLEGLTATHPLYD-QASLLILGNHVTLDDGTGLVHTAPGFGADDFVVGMKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI SP+D  G FT+E  ++ G+      N  +   + E  SL+    + H YP+DWRTKK
Sbjct: 342 PIFSPIDAHGCFTDEIPEYKGV-FYDKANKMITDRMKENGSLLKLNFFTHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS++GFRQ  +D +  V ++P
Sbjct: 401 PVIFRATPQWFASIDGFRQQVLDQLENVDFIP 432



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 173/336 (51%), Gaps = 39/336 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA+++RLWV+SV+ + DV +     +Q S+ YRK+R T+R++L N  D+    N + Y+
Sbjct: 611 FGAEIIRLWVASVNSSSDVSVSVDSFKQTSEAYRKIRNTIRFMLANTTDFDPKDNRVVYN 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL   D+Y + +L  ++ N++  Y+ Y F  + + + +F+  ++S FY D AKD +Y   
Sbjct: 671 DLRPEDKYIVMKLNELITNVKADYDKYDFANVNKSVLKFLTNEMSTFYLDFAKDVVYIDA 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYTLEDGSAAEFVFESK 514
             S +RRS QTV+    ++I +++ PILPH  E V++ L  P  Y ++     E   E  
Sbjct: 731 EDSHSRRSMQTVIYDAAVAISKLLTPILPHTMEQVFEYLKEPEEY-IQLTDMPEVKIEDD 789

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           +  +              WGK ++ R  V K LEVAR  KLIG SLEAKV ++ +D    
Sbjct: 790 FEHIKAT-----------WGKFMDFRDNVLKSLEVARDNKLIGKSLEAKVTVYPND---- 834

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV---WIGV 631
             L+E  T       L ++ I+SQ E+              S E   E  DK     + V
Sbjct: 835 -ELKE--TLNSIDSNLGQLLIVSQFEI--------------SDETAPENADKYENEAVLV 877

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +AEG  C RC    T VGS    P  C+RC +++ 
Sbjct: 878 EKAEGKVCSRCRMTKTDVGSDPNFPDFCARCAKIVT 913


>gi|49483356|ref|YP_040580.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257427907|ref|ZP_05604305.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430540|ref|ZP_05606922.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433301|ref|ZP_05609659.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436143|ref|ZP_05612190.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903745|ref|ZP_06311633.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905509|ref|ZP_06313364.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282910766|ref|ZP_06318569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913969|ref|ZP_06321756.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918891|ref|ZP_06326626.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924014|ref|ZP_06331690.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957935|ref|ZP_06375386.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501002|ref|ZP_06666853.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509960|ref|ZP_06668669.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526549|ref|ZP_06671234.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427679|ref|ZP_06820311.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|415683781|ref|ZP_11448983.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|417888864|ref|ZP_12532966.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
 gi|418565192|ref|ZP_13129606.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
 gi|418582027|ref|ZP_13146105.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1605]
 gi|418595545|ref|ZP_13159152.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
 gi|418601278|ref|ZP_13164716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
 gi|418891825|ref|ZP_13445940.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1176]
 gi|418897730|ref|ZP_13451800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC341D]
 gi|418908904|ref|ZP_13462907.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG149]
 gi|418922775|ref|ZP_13476692.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1233]
 gi|418985773|ref|ZP_13533459.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1500]
 gi|1174521|sp|P41972.1|SYI1_STAAU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81651290|sp|Q6GHP2.1|SYI_STAAR RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|437916|emb|CAA52296.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|49241485|emb|CAG40171.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257274748|gb|EEV06235.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278668|gb|EEV09287.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281394|gb|EEV11531.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284425|gb|EEV14545.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313986|gb|EFB44378.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316701|gb|EFB47075.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322037|gb|EFB52361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325371|gb|EFB55680.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330801|gb|EFB60315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595363|gb|EFC00327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790084|gb|EFC28901.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920621|gb|EFD97684.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096007|gb|EFE26268.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467410|gb|EFF09927.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128037|gb|EFG57671.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315194079|gb|EFU24472.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|341853984|gb|EGS94860.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
 gi|371974673|gb|EHO91992.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
 gi|374399105|gb|EHQ70253.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
 gi|374401125|gb|EHQ72212.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
 gi|377705591|gb|EHT29895.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1500]
 gi|377710437|gb|EHT34675.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1605]
 gi|377731157|gb|EHT55214.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1176]
 gi|377736098|gb|EHT60128.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1233]
 gi|377753942|gb|EHT77852.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG149]
 gi|377760765|gb|EHT84641.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC341D]
          Length = 917

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|297591363|ref|ZP_06950001.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|384867925|ref|YP_005748121.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|297576249|gb|EFH94965.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438430|gb|ADQ77501.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 920

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 141 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 201 IEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 252

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 253 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 291 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 350 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 409 FRATPQWFASISKVRQDILDAI 430



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 787 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 835 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 882

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 883 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 916


>gi|418900600|ref|ZP_13454657.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1214]
 gi|418916988|ref|ZP_13470947.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1267]
 gi|418982106|ref|ZP_13529814.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1242]
 gi|377703068|gb|EHT27384.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1214]
 gi|377704387|gb|EHT28696.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1242]
 gi|377750162|gb|EHT74100.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1267]
          Length = 917

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/375 (38%), Positives = 208/375 (55%), Gaps = 39/375 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V E    +LD KWRTF       
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLD-KWRTF------- 801

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
               + LR +VN+ LE AR  K+IG SLEAKV + ++D   AS   E  T+    D L +
Sbjct: 802 ----MNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNAS---EFLTS---FDALHQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGS 651
           +FI+SQV+V+    +   +   Y  G+ ++E           A+G KCERCWNYS  +G+
Sbjct: 852 LFIVSQVKVVDKLDD---QATAYEHGDIVIE----------HADGEKCERCWNYSEDLGA 898

Query: 652 FVEHPTLCSRCYEVL 666
             E   LC RC +V+
Sbjct: 899 VDELTHLCPRCQQVV 913


>gi|418663174|ref|ZP_13224699.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-122]
 gi|418955382|ref|ZP_13507322.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-189]
 gi|375034807|gb|EHS27957.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-122]
 gi|375370865|gb|EHS74657.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-189]
          Length = 853

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 193/321 (60%), Gaps = 32/321 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE+
Sbjct: 75  FRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 134

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L+
Sbjct: 135 EYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPELK 186

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y    +                        +K +     SD V          + ++K  
Sbjct: 187 YGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKEY 224

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++S
Sbjct: 225 TGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVIS 283

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           P+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP IF
Sbjct: 284 PIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIF 342

Query: 304 RATEQWFASVEGFRQAAMDAI 324
           RAT QWFAS+   RQ  +DAI
Sbjct: 343 RATPQWFASISKVRQDILDAI 363



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 541 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 600

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 601 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 660

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 661 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 719

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 720 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 767

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 768 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 815

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 816 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 849


>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 931

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 209/333 (62%), Gaps = 35/333 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV  DW++PYLTLD E+EAAQI+VFG  + +G +Y+ KKPV+WS SS +ALAE
Sbjct: 136 MAGFKRLGVSGDWDHPYLTLDKEFEAAQIKVFGDFAKKGLLYQAKKPVYWSWSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +     + +A            G+L+    D  L VWTTTPWTVPA+ AVA+N 
Sbjct: 196 AEVEYHDVVAKTAFFA-----EQVKDGKGVLDN---DTYLVVWTTTPWTVPASEAVAINP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVI 179
             +YAVV+           PAN          D +K F++ +S L    +   WG+  V+
Sbjct: 248 DFEYAVVK-----------PAN----------DDRK-FVVASSRLAEIADKLDWGSYEVV 285

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G +LE     HP  +R+  V + GDY+T ++GTGLVHTAPG+G +DY    KY L
Sbjct: 286 -KTVKGQELEYVTTQHPYLDRELLVGL-GDYVTDDTGTGLVHTAPGYGDDDYWFGKKYDL 343

Query: 240 PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           PIL+P++D+G  T E G +F G+      +V+ +K L+E+ +L++EEP +H YP+DWRTK
Sbjct: 344 PILAPMNDQGVLTAENGPEFDGVFYQKADDVS-LKLLEEKNALLLEEPLKHSYPFDWRTK 402

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +P +FRAT+QWF S++  R   + A+ +VK+ P
Sbjct: 403 QPIVFRATDQWFVSIDKMRDEILKAVDEVKYFP 435



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 165/341 (48%), Gaps = 35/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +     GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+   
Sbjct: 607 PAKVVQQMGAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFDAD 666

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N++SY+ L  +DQY L +    +  +R+ +++Y F   ++++  F+  DLS FY +VAK
Sbjct: 667 ENTVSYEKLTSVDQYMLVKFNQFLAKMRDEFDAYDFLDGYKLLINFVNNDLSAFYMNVAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--QNLP--FAYTLEDGS 505
           D LY     S  RRS QTV    L+ +V+++ PILPH  E+VW   N P  F    E   
Sbjct: 727 DVLYIQPANSLERRSMQTVFYQILVGLVKLLTPILPHTTEEVWGYMNEPEEFVQLTEIPE 786

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           A  F  E +   L E+W  F           +ELR+ V KVLE AR  KLIG SL A+  
Sbjct: 787 ARHFTNEEQ---LLEQWNQF-----------MELRSHVLKVLEDARNDKLIGRSLGARAD 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+   +  A             D L        VE+L    +  I     +        D
Sbjct: 833 LYVKPSQKAV-----------LDALN-----YDVELLLGVSDLEIHAADEAPAEAEHFND 876

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              + V +A G  C RC      VGS   +P LC+RC  ++
Sbjct: 877 GAAVRVQKAAGEVCARCRMTKEDVGSDPAYPQLCARCARIV 917


>gi|404418423|ref|ZP_11000190.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
 gi|403489016|gb|EJY94594.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
          Length = 916

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/323 (45%), Positives = 199/323 (61%), Gaps = 34/323 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQ+ +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVKGDFNNPYITLKPEYEAAQLRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDG----KGIVDN---DAKFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YA    Q  + G+             V KD       + SD+V  LE  W   ++ ++K
Sbjct: 250 TYA----QYKVNGEKYI----------VGKD-------LISDVVNQLE--WDENEIELEK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              GS+LE     HP  +R   VVI G ++TT++GTG VHTAPGHG++DY+   KY LP+
Sbjct: 287 EFRGSELEYVEAQHPFMDR-TSVVINGTHVTTDAGTGCVHTAPGHGEDDYIVGQKYNLPV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SPV+D+G FTEEAG+F GL      N  +   L E+ +L+  E   H YP+DWRTKKP 
Sbjct: 346 ISPVNDKGVFTEEAGQFEGL-FYDKANKEITDLLKEKHALLKLEFITHSYPHDWRTKKPV 404

Query: 302 IFRATEQWFASVEGFRQAAMDAI 324
           IFRAT QWFAS++  R   + A+
Sbjct: 405 IFRATPQWFASIDKVRSDILAAV 427



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 192/341 (56%), Gaps = 37/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++   +L  IDQY L +L     +  E Y+++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDALPETELLEIDQYLLNRLREFTASTIEHYDNFDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG---S 505
           KD LY     +  RRS QTVL   ++ + +++APIL H AE+VW ++P  +  E+    +
Sbjct: 725 KDILYIEAQDAHKRRSMQTVLYQIIVDMTKLLAPILAHTAEEVWSHIP--HVKEESVHLT 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
               V E    +L EKW TF           ++LR +VN+ LEVAR  K+IG SLEAKV 
Sbjct: 783 RMPEVVEVNHEIL-EKWNTF-----------MKLRDDVNRALEVARNDKVIGKSLEAKVI 830

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           +  +     +      T       L+++FI SQ EV+    NG   + PY          
Sbjct: 831 IGNNAQFDVTSFLNQFT------DLEQLFITSQAEVVDEVDNGT--SYPYGD-------- 874

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              I +  AEG KCERCWNYST++G+  E   LC RC EV+
Sbjct: 875 ---IRIEHAEGEKCERCWNYSTELGNVGELENLCPRCQEVV 912


>gi|335996872|ref|ZP_08562789.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
 gi|335351942|gb|EGM53433.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
          Length = 915

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 206/331 (62%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G+  +W+NPYLTL PE+EAAQI VFG+M+ +G IY+G +PV+WS SS +ALAEAE
Sbjct: 123 DFKRLGIAGEWDNPYLTLHPEFEAAQIRVFGKMAEKGLIYKGLRPVYWSWSSESALAEAE 182

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y V           G+L+    +  L VWTTTPWT+PA+  V V+AK 
Sbjct: 183 VEYHDVVSPSAFYGV-----QVKDGKGVLD---TNTYLVVWTTTPWTIPASEGVTVDAKF 234

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            YAVV+     EGD                D+K    ++A++LV     ++G K   + +
Sbjct: 235 DYAVVKP----EGD----------------DRK---FVLAAELVKENAERFGWKNYEVLE 271

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL G+DLE     HP  + +  + + GD++T ++GTGLVHTAPG+G +DY   +KYGLPI
Sbjct: 272 TLKGADLEYVTARHPFYDDKELLTMIGDFVTLDAGTGLVHTAPGYGDDDYKVGMKYGLPI 331

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +PV+D+G  T++ G  F+G+    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 332 YAPVNDQGYLTDDCGPDFAGV-FYDDANEVSLKKLEEANVLLKQMDYEHSYPFDWRTKKP 390

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   +DAI +VK++P
Sbjct: 391 IIFRATPQWFASVDKIRSEILDAIDEVKFLP 421



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 175/343 (51%), Gaps = 36/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +      Q+S+ YRK R T+R++L N  D+  
Sbjct: 592 VPSEVVDKMGAEIIRLWVLSVDTSADVRVSMDSFSQISESYRKFRNTMRFMLANTTDFDP 651

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++YDDL   D+Y         K I + Y +Y F  I++ +  F+  +LS FY DVA
Sbjct: 652 AENTVAYDDLEACDKYMEVLANKFTKEILDDYANYNFMDIYKKLINFLTTELSAFYLDVA 711

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDG 504
           KD +Y     S  RRS QTVL   L+ + +++ P+LPH  E++W+ L     +A   E  
Sbjct: 712 KDVVYVEAEDSHKRRSMQTVLYDVLVRLTKLMTPVLPHTTEEIWEYLKEPEDYAQLAEMP 771

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
             A +  E +   L E W+ F           +++R++V K LE AR  KLIG S EA V
Sbjct: 772 EVAHYDGEVE---LLENWKRF-----------MKVRSDVFKSLENARNEKLIGKSFEAHV 817

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+  D  + + L ++         ++++ I+S ++VLP          P       +  
Sbjct: 818 ELYVSDG-VKAELEKLNA------NVRQLLIVSALDVLPKD------QAPEDA----DDY 860

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           D++ + V  A+G  C RC   +T VGS    P LC  C +V++
Sbjct: 861 DEIKVVVKHADGEVCPRCRRTTTTVGSDARLPQLCDECAKVVS 903


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 197/330 (59%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFNI----KDDKGVVD---SDAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y    +                        QK    IVA  L  T+    G     + +
Sbjct: 250 KYGQYNVNG----------------------QK---YIVAQALSETVADALGWDKESIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYEL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAIEETNF 432



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/372 (37%), Positives = 203/372 (54%), Gaps = 34/372 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  ++L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPESDYIPENELLDVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L 
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILT 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            + ++++PIL H AE+VW + P           E V  +  P + E  R      +  W 
Sbjct: 751 DMTKLLSPILVHTAEEVWSHTPHV-------KEESVHLTDMPEVVEVDREL----LDKWN 799

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
            +++LR +VN+ LE AR  K+IG SLEAKV +  +++  A+   +      +   LQ++F
Sbjct: 800 TLMDLRDDVNRALEQARNEKVIGKSLEAKVVIGNNESFKAAEFLQ------EFKDLQQLF 853

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVEV+ S  NG      Y             I +  AEG KCERCWNYS ++GS  E
Sbjct: 854 IVSQVEVVDSVENG--ETYKYGD-----------IRIEHAEGEKCERCWNYSDELGSVGE 900

Query: 655 HPTLCSRCYEVL 666
              LC RC EV+
Sbjct: 901 LDHLCPRCQEVV 912


>gi|222151014|ref|YP_002560167.1| isoleucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782419|sp|B9EB60.1|SYI_MACCJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|222120136|dbj|BAH17471.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 914

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 205/330 (62%), Gaps = 36/330 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW NPY+TL  ++EA QI +FG M+ +GYIY+GKKPV+WSPSS ++LAEA
Sbjct: 137 ADFKRLGVNGDWENPYITLQEKFEAEQIRLFGDMAAKGYIYKGKKPVYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  VS SIY  F ++       GL+++   D+   +WTTTPWT+PAN A+A+N  
Sbjct: 197 EIEY-QDKVSPSIYVAFDVLDG----KGLVDD---DVKFVIWTTTPWTLPANVAIALNKD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-I 179
           L Y  V +      D++                   +I+  + L    +A  W  + V I
Sbjct: 249 LDYVQVRVN-----DTS-------------------YIVAQALLDNVCDAVGWDKEGVQI 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +KT  G+DLE  +  HP  +R+  ++I GD++TT++GTG VHTAPGHG++D++   KY L
Sbjct: 285 EKTFKGADLEFVKARHPFIDRES-LIILGDHVTTDAGTGCVHTAPGHGEDDFIVGQKYEL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            ++SPVD +G +T EAG+F G+      N  + + L+    L+  + ++H YP+DWRTKK
Sbjct: 344 DVISPVDGKGVYTSEAGEFEGM-YYDKANKVITEKLEASGHLLKLDFFKHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  ++AI + ++
Sbjct: 403 PVIFRATPQWFASINKVRQDILNAIEETEF 432



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 181/339 (53%), Gaps = 34/339 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWV SVDY  DV I   +L+Q+S++YRK+R T ++LLGN++D+  
Sbjct: 605 LPEKVVKQMGADIIRLWVMSVDYLADVRISDDILKQVSEVYRKIRNTFKFLLGNVNDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++ Y +L  IDQ+ L +L   V N  + Y++  +  ++Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAVPYAELVEIDQFMLNKLYTFVNNAHKHYDNNDYLFMYQELQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTV+   L S+ +V+API+PH A+++W + P           E
Sbjct: 725 KDILYIEAQDSHVRRSMQTVVYEVLTSLTKVLAPIIPHTADEIWSHTPHV-------TEE 777

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P +    ++     I  W   LE+R +V K +E  R  K+IG SLEA VY+  
Sbjct: 778 SVHLADMPEV----QSVDTALIGKWNHFLEIRDDVLKAIEETRNDKVIGKSLEAAVYIQA 833

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            +    + L+         D L ++FI S  EV+   P G   N+               
Sbjct: 834 KNEEDQALLKSF-------DNLHQLFITSYAEVV-DEPQGTDYNLSN------------- 872

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVE-HPTLCSRCYEVL 666
           + V  AEG KCERCWNYST +      HP +C RC  VL
Sbjct: 873 VLVKHAEGEKCERCWNYSTVLTEESHAHPHVCPRCLSVL 911


>gi|386830730|ref|YP_006237384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
           5096 0412]
 gi|417797869|ref|ZP_12445055.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
 gi|418655149|ref|ZP_13217026.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-105]
 gi|334276991|gb|EGL95230.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
 gi|375037998|gb|EHS30998.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-105]
 gi|385196122|emb|CCG15741.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
           5096 0412]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  ++NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGNFNNPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|282916443|ref|ZP_06324205.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319883|gb|EFB50231.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|379020900|ref|YP_005297562.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M013]
 gi|418951867|ref|ZP_13503934.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-160]
 gi|359830209|gb|AEV78187.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M013]
 gi|375371039|gb|EHS74830.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-160]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|294848186|ref|ZP_06788933.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294824986|gb|EFG41408.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSGDLGAVDELTHLCPRCQQVV 913


>gi|418598300|ref|ZP_13161810.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
 gi|374399657|gb|EHQ70793.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEIDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|417655626|ref|ZP_12305336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
 gi|418321964|ref|ZP_12933303.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           VCU006]
 gi|418875127|ref|ZP_13429387.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC93]
 gi|448744996|ref|ZP_21726872.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
 gi|329728844|gb|EGG65265.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
 gi|365224579|gb|EHM65844.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           VCU006]
 gi|377770187|gb|EHT93949.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC93]
 gi|445561705|gb|ELY17896.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|384864420|ref|YP_005749779.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|312829587|emb|CBX34429.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 IPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|384547435|ref|YP_005736688.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|298694484|gb|ADI97706.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|297208165|ref|ZP_06924595.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912243|ref|ZP_07129686.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296886904|gb|EFH25807.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886489|gb|EFK81691.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 920

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 141 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 201 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 252

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 253 KYGQYNVDG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 291 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 350 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 409 FRATPQWFASISKVRQDILDAI 430



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 787 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 835 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 882

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 883 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 916


>gi|221140635|ref|ZP_03565128.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|384861787|ref|YP_005744507.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|302751016|gb|ADL65193.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q F+ V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFLNVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|15924183|ref|NP_371717.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926776|ref|NP_374309.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651763|ref|YP_186069.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161418|ref|YP_493784.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194899|ref|YP_499699.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267685|ref|YP_001246628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393743|ref|YP_001316418.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221315|ref|YP_001332137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979514|ref|YP_001441773.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509367|ref|YP_001575026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253314953|ref|ZP_04838166.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731812|ref|ZP_04865977.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005980|ref|ZP_05144581.2| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795751|ref|ZP_05644730.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415975|ref|ZP_05682245.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258419722|ref|ZP_05682689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438764|ref|ZP_05689917.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444530|ref|ZP_05692859.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447637|ref|ZP_05695781.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449479|ref|ZP_05697582.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451891|ref|ZP_05699912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454858|ref|ZP_05702822.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048766|ref|ZP_06021648.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051692|ref|ZP_06023911.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202808|ref|YP_003282077.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892679|ref|ZP_06300914.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282919974|ref|ZP_06327703.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929238|ref|ZP_06336813.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024117|ref|ZP_06378515.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|295407131|ref|ZP_06816932.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276131|ref|ZP_06858638.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245983|ref|ZP_06929842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|379014384|ref|YP_005290620.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VC40]
 gi|384869726|ref|YP_005752440.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|387150336|ref|YP_005741900.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|415688519|ref|ZP_11452209.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|415691040|ref|ZP_11453279.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|417650020|ref|ZP_12299800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|417651355|ref|ZP_12301118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|417800988|ref|ZP_12448090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
 gi|417893442|ref|ZP_12537471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
 gi|417898891|ref|ZP_12542804.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
 gi|417901503|ref|ZP_12545379.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
 gi|418286458|ref|ZP_12899104.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
 gi|418312757|ref|ZP_12924266.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
 gi|418316131|ref|ZP_12927575.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
 gi|418318217|ref|ZP_12929627.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
 gi|418427328|ref|ZP_13000340.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|418430169|ref|ZP_13003085.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|418433130|ref|ZP_13005910.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|418436805|ref|ZP_13008607.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|418439676|ref|ZP_13011384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|418442729|ref|ZP_13014331.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|418445788|ref|ZP_13017264.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|418448732|ref|ZP_13020124.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|418451556|ref|ZP_13022890.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|418561885|ref|ZP_13126360.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
 gi|418569089|ref|ZP_13133429.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
 gi|418570829|ref|ZP_13135090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
 gi|418579023|ref|ZP_13143118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1114]
 gi|418638184|ref|ZP_13200487.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
 gi|418642777|ref|ZP_13204963.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
 gi|418643746|ref|ZP_13205904.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
 gi|418647714|ref|ZP_13209777.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
 gi|418649435|ref|ZP_13211463.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
 gi|418654625|ref|ZP_13216521.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
 gi|418657805|ref|ZP_13219560.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-111]
 gi|418873480|ref|ZP_13427775.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-125]
 gi|418878043|ref|ZP_13432278.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1165]
 gi|418880870|ref|ZP_13435089.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1213]
 gi|418883799|ref|ZP_13437994.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1769]
 gi|418886453|ref|ZP_13440601.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1150]
 gi|418894812|ref|ZP_13448909.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1057]
 gi|418903401|ref|ZP_13457442.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1770]
 gi|418906127|ref|ZP_13460154.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|418911798|ref|ZP_13465781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG547]
 gi|418914290|ref|ZP_13468262.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|418920271|ref|ZP_13474204.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC348]
 gi|418925425|ref|ZP_13479327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG2018]
 gi|418928449|ref|ZP_13482335.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1612]
 gi|418931259|ref|ZP_13485101.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1750]
 gi|418946962|ref|ZP_13499361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-157]
 gi|418991055|ref|ZP_13538716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1096]
 gi|419775373|ref|ZP_14301315.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
 gi|419785561|ref|ZP_14311313.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
 gi|421150076|ref|ZP_15609732.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|422743417|ref|ZP_16797401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|424785022|ref|ZP_18211825.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
 gi|440708391|ref|ZP_20889057.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
 gi|440734638|ref|ZP_20914250.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|443637313|ref|ZP_21121395.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
 gi|443640116|ref|ZP_21124113.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
 gi|54039673|sp|P67509.1|SYI_STAAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|54042036|sp|P67508.1|SYI_STAAM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81859601|sp|Q5HGN8.1|SYI_STAAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123407059|sp|Q2FZ82.1|SYI_STAA8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123749624|sp|Q2FHP4.1|SYI_STAA3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166229773|sp|A7X1D8.1|SYI_STAA1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|172048846|sp|A6QG93.1|SYI_STAAE RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082335|sp|A6U113.1|SYI_STAA2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082336|sp|A5IS79.1|SYI_STAA9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082337|sp|A8Z3N1.1|SYI_STAAT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|13700992|dbj|BAB42288.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246963|dbj|BAB57355.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285949|gb|AAW38043.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127392|gb|ABD21906.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202457|gb|ABD30267.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740754|gb|ABQ49052.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946195|gb|ABR52131.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374115|dbj|BAF67375.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721649|dbj|BAF78066.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368176|gb|ABX29147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724462|gb|EES93191.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257789723|gb|EEV28063.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839311|gb|EEV63785.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257844307|gb|EEV68689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848023|gb|EEV72016.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850023|gb|EEV73976.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853828|gb|EEV76787.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857467|gb|EEV80365.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860499|gb|EEV83326.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863241|gb|EEV86005.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160427|gb|EEW45452.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163222|gb|EEW47782.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075098|gb|ACY11071.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589197|gb|EFB94294.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594690|gb|EFB99674.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764676|gb|EFC04801.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816875|gb|ADC37362.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967984|gb|EFG44012.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177147|gb|EFH36401.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315130984|gb|EFT86968.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196923|gb|EFU27266.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320143048|gb|EFW34838.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313861|gb|AEB88274.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329725029|gb|EGG61525.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727539|gb|EGG63995.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|334277482|gb|EGL95712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
 gi|341845342|gb|EGS86544.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
 gi|341847174|gb|EGS88359.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
 gi|341854827|gb|EGS95689.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
 gi|365167166|gb|EHM58642.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
 gi|365238402|gb|EHM79239.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
 gi|365241802|gb|EHM82537.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
 gi|365243665|gb|EHM84336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
 gi|371975161|gb|EHO92461.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
 gi|371978274|gb|EHO95524.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
 gi|371983009|gb|EHP00157.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
 gi|374363081|gb|AEZ37186.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VC40]
 gi|375014450|gb|EHS08131.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
 gi|375015890|gb|EHS09534.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
 gi|375023408|gb|EHS16871.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
 gi|375028044|gb|EHS21400.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
 gi|375029424|gb|EHS22752.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
 gi|375029808|gb|EHS23133.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
 gi|375039969|gb|EHS32879.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-111]
 gi|375366017|gb|EHS70029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-125]
 gi|375377159|gb|EHS80649.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-157]
 gi|377694165|gb|EHT18530.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1165]
 gi|377695676|gb|EHT20036.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1057]
 gi|377697050|gb|EHT21405.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1114]
 gi|377714886|gb|EHT39084.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1769]
 gi|377715092|gb|EHT39289.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1750]
 gi|377723177|gb|EHT47302.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1096]
 gi|377725176|gb|EHT49291.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG547]
 gi|377725406|gb|EHT49519.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1150]
 gi|377731763|gb|EHT55816.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1213]
 gi|377738361|gb|EHT62370.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1612]
 gi|377742416|gb|EHT66401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1770]
 gi|377744494|gb|EHT68471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG2018]
 gi|377757792|gb|EHT81680.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|377765427|gb|EHT89277.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|377765630|gb|EHT89479.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC348]
 gi|383362531|gb|EID39882.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
 gi|383971057|gb|EID87147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
 gi|387718564|gb|EIK06522.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|387718915|gb|EIK06871.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|387725796|gb|EIK13394.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|387727909|gb|EIK15409.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|387730779|gb|EIK18137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|387735716|gb|EIK22826.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|387737394|gb|EIK24460.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|387737948|gb|EIK25002.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|387744437|gb|EIK31201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|394329466|gb|EJE55568.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|408423397|emb|CCJ10808.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408425387|emb|CCJ12774.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408427375|emb|CCJ14738.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408429362|emb|CCJ26527.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408431350|emb|CCJ18665.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408433344|emb|CCJ20629.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408435335|emb|CCJ22595.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408437320|emb|CCJ24563.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|421956432|gb|EKU08761.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
 gi|436431666|gb|ELP29019.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|436504974|gb|ELP40935.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
 gi|443405863|gb|ELS64454.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
 gi|443405894|gb|ELS64484.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|417904169|ref|ZP_12547999.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
 gi|341847992|gb|EGS89161.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRNDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|387142803|ref|YP_005731196.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|418424331|ref|ZP_12997454.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|418454612|ref|ZP_13025874.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|418457488|ref|ZP_13028691.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|269940686|emb|CBI49066.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|387720634|gb|EIK08541.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|387745727|gb|EIK32477.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|387747220|gb|EIK33929.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11b]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/375 (38%), Positives = 208/375 (55%), Gaps = 39/375 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V E    +LD KWRTF       
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLD-KWRTF------- 801

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
               + LR +VN+ LE AR  K+IG SLEAKV + ++D   AS   E  T+    D L +
Sbjct: 802 ----MNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNAS---EFLTS---FDALHQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGS 651
           +FI+SQV+V+    +   +   Y  G+ ++E           A+G KCERCWNYS  +G+
Sbjct: 852 LFIVSQVKVVDKLDD---QATAYEHGDIVIE----------HADGEKCERCWNYSEDLGA 898

Query: 652 FVEHPTLCSRCYEVL 666
             E   LC RC +V+
Sbjct: 899 VDELTHLCPRCQQVV 913


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/390 (38%), Positives = 217/390 (55%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y + 
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKIS 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL    D N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-FYSDANKAIIKHLTETGHILKTQEISHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  + AI ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/341 (41%), Positives = 209/341 (61%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    AE +F + W 
Sbjct: 744 EDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----AESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNTLKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-ELGSDSEHPTLCPRCAAVL 932


>gi|253733568|ref|ZP_04867733.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304381246|ref|ZP_07363899.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|422745577|ref|ZP_16799516.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|253728438|gb|EES97167.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340229|gb|EFM06170.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140992|gb|EFW32839.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 920

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 141 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 201 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 252

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 253 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 291 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 350 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 409 FRATPQWFASISKVRQDILDAI 430



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 787 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 835 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 882

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 883 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 916


>gi|82750799|ref|YP_416540.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754638|sp|Q2YXH4.1|SYI_STAAB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|82656330|emb|CAI80746.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIELEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q F+ V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFLNVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|418280884|ref|ZP_12893706.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
 gi|365166985|gb|EHM58462.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
          Length = 917

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|423137732|ref|ZP_17125375.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
           F0419]
 gi|371959201|gb|EHO76893.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
           F0419]
          Length = 933

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G K   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIKNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDPEHPTLCPRCAAVL 932


>gi|340749643|ref|ZP_08686496.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 933

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 207/342 (60%), Gaps = 29/342 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPADVIKVYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFNP 672

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y DL  ID++AL +LE + + + E+YE Y+F+ +FQ I  F  VD+S FY D+ 
Sbjct: 673 ATDKVAYKDLMEIDKWALNKLEILKRRVTENYEKYEFYNLFQDIHYFAGVDMSAFYLDII 732

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLYT GT S  R+S QTV++  LL++ ++IAPIL   AE++W  LP A   E     E
Sbjct: 733 KDRLYTEGTNSLDRKSAQTVMTEILLTLTKMIAPILSFTAEEIWDTLPEALKDE-----E 787

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYL 566
            V  + W   ++++    V     W  I+++R E NK LE AR G  ++IG+SL+AKV L
Sbjct: 788 SVLLTSWYEENDEYLNPEVEAK--WADIIKVRKEANKSLEKARQGENRIIGNSLDAKVML 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD- 625
           F+ +A + + L E      + D L+   I+S VE++ S             E  VEG++ 
Sbjct: 846 FSKNADMQNFLAE------NRDRLELALIVSNVEIVDS-----------CDETFVEGEEL 888

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             ++I V  AEG KCERCW YST+VG   EHPTLC RC  VL
Sbjct: 889 KDLYIKVVHAEGEKCERCWKYSTEVGVDAEHPTLCPRCTSVL 930



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 219/395 (55%), Gaps = 51/395 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLTL PEYEA Q+EVFG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FKRLGVLGDWENPYLTLKPEYEAKQLEVFGELYENGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY      +      GL  E      + +WTTTPWT+PAN A+++N   +
Sbjct: 201 EY-KNVTSPSIYVKMEANADLLERLGLTEETW----VVIWTTTPWTLPANMAISLNPNFE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V                 K+  GN         +I+A DL     A+    +  + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILAKDLAEKAFAEMEIAEYELVKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GSDLE   Y HP   R   +++ G ++T ++GTG VHTAPGHGQ+DYV   +YG+ ++
Sbjct: 291 FIGSDLERATYKHPFLERTGMIIL-GTHVTADAGTGCVHTAPGHGQDDYVVGTRYGIEVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++++G  TEEAG+F+GL  L   N  +V +L E   L+  +  EH YP+DWR+K P I
Sbjct: 350 SPINNKGVLTEEAGQFAGLFYL-KANKEIVAHLTETGHLLKLKNIEHSYPHDWRSKTPVI 408

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRATEQWF   EG   R+ A+ A+  V++VP           +  P +     R+W    
Sbjct: 409 FRATEQWFVKAEGSDLRERALKALDNVEFVPAWGRNRIGSMLETRPDWCISRQRVWGVPI 468

Query: 347 -VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 380
            V   + TG  +   ++L ++ +I +K  GT  +L
Sbjct: 469 PVFYNEETGKEIYNKEILARIVEIVKK-EGTAAWL 502


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27.1|SYI_SYMTH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 192/329 (58%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPY T+ PE+EA ++EVFG M+ +GYIYRG KPV+W P   TALAEAE
Sbjct: 143 QFKRLGVRGDWENPYRTVAPEFEAKEVEVFGAMAAKGYIYRGLKPVYWCPYCETALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S SIY  F +V       G L E      L +WTTTPWT+PAN AVAV+ ++
Sbjct: 203 IEYNE-KTSYSIYVRFPVVDP----RGKLPE---GSYLVIWTTTPWTIPANLAVAVHPEV 254

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y V   +                 GN++           +  +P  E           T
Sbjct: 255 EYGVYATEK----------------GNLVVATALAEKFFQAVNLPAAEP--------VAT 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G+DLE   Y H + +R  PV++ GD++TTE GTGLVHTAPGHG ED+    KYGLP+L
Sbjct: 291 LKGADLEGITYRHLLYDRVSPVIL-GDHVTTEDGTGLVHTAPGHGHEDFEVGQKYGLPVL 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PV+D+G FT EAG F+G+  +   N  ++K LDE   L+ +    H+Y + WR K P I
Sbjct: 350 NPVNDQGVFTAEAGPFAGM-FIEKANPEIIKALDEAGMLLGQGKIRHQYAHCWRCKNPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWF  VEGF   A +A+  V+W+P
Sbjct: 409 YRATVQWFVKVEGFMDIAKEAMNHVRWIP 437



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 187/335 (55%), Gaps = 29/335 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DY  D+ +   +L+Q++D YRK+R TLRYLLGNL+D+    + +  D
Sbjct: 619 YGADILRLWVASTDYRHDMALSENILKQVADAYRKIRNTLRYLLGNLYDFNPDTDMVERD 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  ID++ + +L+ +++ + E+Y  Y++  ++  +  +  VDLS  Y D+ KDRLYT  
Sbjct: 679 DLLEIDRWQMHRLQEVIRKVTEAYREYEYHIVYHTLNNYCAVDLSAVYLDILKDRLYTSA 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QTVL     +++R++ PIL   AE+ + +LP        S    + +    
Sbjct: 739 PASRERRSAQTVLYHVADALIRMLTPILTFTAEEAYSHLPKPAGSPPTSQLLMMPQPDPA 798

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD--DASLA 574
            LDE            W +++ELR  V  VLE AR  KLIGSS EA V L+    + S A
Sbjct: 799 YLDENLAA-------EWDRLMELRDAVQVVLERARVDKLIGSSQEAAVNLYASGGEGSWA 851

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVL---PSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
             L      +H  D L  IFI+S V++     S P         SG Y  EG   + + V
Sbjct: 852 ELLD-----RHLPD-LPSIFIVSDVKLFVGGQSAP---------SGTYFGEGPGDLSVEV 896

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            RAEG KCERCWNY  +VG+  +HPTLC RC  V+
Sbjct: 897 VRAEGEKCERCWNYR-KVGAIEQHPTLCERCAGVV 930


>gi|422939826|ref|ZP_16967197.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis
           ATCC 51191]
 gi|339890810|gb|EGQ79880.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis
           ATCC 51191]
          Length = 933

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G K   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIKNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + I Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKILYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KESVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDSEHPTLCPRCAAVL 932


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G K   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIKNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDPEHPTLCPRCAAVL 932


>gi|424768619|ref|ZP_18195883.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
 gi|402348510|gb|EJU83496.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
          Length = 920

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 141 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 201 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 252

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 253 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 291 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 350 SPIDDKGVFTEEGGQFEGI-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 409 FRATPQWFASISKVRQDILDAI 430



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 787 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 835 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 882

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 883 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 916


>gi|21282805|ref|NP_645893.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486033|ref|YP_043254.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|418934092|ref|ZP_13487916.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC128]
 gi|448740327|ref|ZP_21722307.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
 gi|39932218|sp|Q8NX29.1|SYI_STAAW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81649443|sp|Q6GA19.1|SYI_STAAS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|21204243|dbj|BAB94941.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244476|emb|CAG42904.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|377771872|gb|EHT95626.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC128]
 gi|445548972|gb|ELY17218.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
          Length = 917

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|237741055|ref|ZP_04571536.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431099|gb|EEO41311.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 709

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 218/390 (55%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL    D N +++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-FYSDANKSIIKHLTETGHILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  + AI ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYES 422
           D+  ID++AL +LE + +++ ESY+ 
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDK 709


>gi|379795559|ref|YP_005325557.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSHR1132]
 gi|356872549|emb|CCE58888.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSHR1132]
          Length = 916

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 194/322 (60%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGIVDS---DAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        QK +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------QKYIVAEALSDAVAEALGWDKDSIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 FSGKELEYVVAQHPFLDRES-LVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R+  +DAI
Sbjct: 406 FRATPQWFASISKVRKDILDAI 427



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 194/341 (56%), Gaps = 37/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSS DY  DV I   +L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDDILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    + L +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVV----DKLDQATNYEHGDIVIE--- 878

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC EV+
Sbjct: 879 -------HADGEKCERCWNYSEDLGAVGELTHLCPRCQEVV 912


>gi|313885240|ref|ZP_07818992.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619931|gb|EFR31368.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 929

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 198/332 (59%), Gaps = 39/332 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  +W+NPYLTL PEYEA Q+ +FG+M+  GYIY+G KPV+WSPSS T+LAEAE+
Sbjct: 140 FMRLGVAGEWDNPYLTLKPEYEAQQVRIFGKMAAAGYIYKGMKPVYWSPSSETSLAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S+Y  F ++       G + E   D    +WTTTPWT+PAN A+   A   
Sbjct: 200 EYHDV-TSPSMYVAFEVLDG----KGRVPE---DAEFVIWTTTPWTIPANLAITAKADAT 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD--LVPTLEAKWGTKLVIKK 181
           YA+V++           A++K               IVA D       E +W    V+  
Sbjct: 252 YALVQV-----------ADRK--------------FIVAQDLLESLAEELEWADYQVL-D 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G D E     HP+ +R   +++ GD++T +SGTGLVHTAPGHG++DY   LKYGL I
Sbjct: 286 TYLGQDFEGMTAKHPLYDRSSLLIV-GDHVTLDSGTGLVHTAPGHGEDDYQVGLKYGLDI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPVD+ G FT+EA  + G+  L  GN  +++ L++   L+      H YP+DWRTKKP 
Sbjct: 345 LSPVDNRGHFTDEAPGYEGMFYL-KGNKVILEDLEKAHRLLKVTEITHSYPHDWRTKKPI 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQ-VKWVPP 332
           IFRAT QWFAS++ FRQ  +D++ Q V W  P
Sbjct: 404 IFRATPQWFASIDKFRQELLDSVEQDVTWHHP 435



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 42/338 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV I  ++L+Q+S+ YRK+R T+R++L N++D+    N + Y +
Sbjct: 614 GADIIRLWVASVDYESDVRISKEILKQISEAYRKIRNTIRFMLSNVNDFDPEKNQVDYQE 673

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY L +   +V +I E YE Y F  I++ +  F+ VDLS FY D AKD LY    
Sbjct: 674 LRPEDQYLLAKYRVLVNDILEDYERYHFSSIYKNVINFVTVDLSAFYLDFAKDVLYIEAA 733

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDGSAAEFVFES 513
               RR+ QTV+   L  +++++ PIL H  E+ W  LP    +    +   A +   E+
Sbjct: 734 DDLNRRAMQTVIYEVLDGLIQLLTPILVHTMEEAWTVLPGKSGYVQLTDLPQAYDLALET 793

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKL--IGSSLEAKVYLFTDDA 571
               + EKW++F            ++R  V K LE A+  +   I  S EA V L+   A
Sbjct: 794 ---AIIEKWQSF-----------FKVRNLVLKGLEEAKNNEADPIKKSFEAAVTLYL-PA 838

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            + + L  +      +D L ++ I+S +++  + S P G +              D + +
Sbjct: 839 QVKAELEGL------SDHLDQLMIVSHLDLADIESAPEGAL------------NMDDMAV 880

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            V  A+G  C+RC     +VG+    P LC RC+ +++
Sbjct: 881 VVDHAQGHVCDRCRAVRPEVGTIEGAPELCHRCHAIVS 918


>gi|121709383|ref|XP_001272405.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119400554|gb|EAW10979.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 1003

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 201/340 (59%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV ADW   + T+D E+E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKGFRSFGVMADWEGHWKTMDKEFEKRQLGVFREMVEKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS +    F +VS PP+ +      + DL   +WTTTPWT+PANA +AV+ 
Sbjct: 207 AELEYKDDHVSTAALVKFPLVSLPPTLAQDPLVQVKDLSAVIWTTTPWTLPANAVIAVHE 266

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L+YA+V  QS   G      ++     N+LK+          DL            VI 
Sbjct: 267 SLEYAIV--QSDTHGQLLVAQSRLEYLENLLKE----------DLT-----------VII 303

Query: 181 KTLAGSDLENCRYVHP----VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
            ++ GS L +     P    V+    P+ I  D++T +SG+GLVH APGHG +DY   + 
Sbjct: 304 PSILGSQLADQTTYRPLFKSVEAEPQPI-IAADFVTADSGSGLVHCAPGHGMDDYEACVP 362

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P  +PVDD+G+FT++A      + SG  VLGDGN AV++Y+D +  L+ +  YEHKY
Sbjct: 363 RGIPAFAPVDDQGRFTDKAMPKDPARLSGKSVLGDGNAAVLEYIDSEGFLLAQHQYEHKY 422

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWR+K P I RATEQWFA V   R  A+ A+  VK+VP
Sbjct: 423 PYDWRSKLPIIIRATEQWFADVADIRGRAVRALEDVKFVP 462



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 10/329 (3%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+W +  DYT DV++G QVL+ ++    K R T + LLG L D++  + + Y  L
Sbjct: 676 GPDALRMWAAGSDYTRDVVMGKQVLQTVNTSLHKFRVTFKLLLGALSDFQPSDQLPYGQL 735

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D+ AL  L  +V   R++   ++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 736 QQVDRMALMHLSEMVLACRKACNDFEFYKAVNAMNRWANLEFSAFYMEAIKDRLYTYGEN 795

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR  QT L      +  V+API P L E+ W++ P        S  E   +      
Sbjct: 796 SISRRGAQTTLFHIYQYLQEVLAPITPLLIEETWEHAPETIR----SHCEHPLKRIASPP 851

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDASLASRL 577
             +W+   +G  Y    +  + + +  + E AR+ K +GSSL++ V+L   +D    S L
Sbjct: 852 PVEWQDHSLGTDYH--DLAAVSSVIKALQEQARSKKQLGSSLQSFVHLVLPEDNPSDSAL 909

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +   +   D   +  + + +  E LP+          YS  Y +    K  + V      
Sbjct: 910 QRTLSELPDLFVVSSVTVGAHGEPLPAALAEA--EWQYSEAYELPSGGKGAVYVYTPPAG 967

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC RCW Y        E   LC RC +V+
Sbjct: 968 KCPRCWRYVVPEPQASEE-ALCDRCEDVV 995


>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 916

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 195/329 (59%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G ++E   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K ++I  +      EA  W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYVIAEALAESVSEALGWDKDTIQLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G ++TT++GTG VHTAPGHG++DYV   KY LP
Sbjct: 286 KEFTGKELEYVETQHPFIDR-VSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP+DD+G FTEE G+F G+      N AV   L ++ +L+  +   H YP+DWRTKKP
Sbjct: 345 VISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTDKGALLKLDFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEETDF 432



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 200/374 (53%), Gaps = 38/374 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPNQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +S+   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V +    +LD+            
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVDVDQELLDK------------ 797

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
           W + + LR +VN+ LE AR  K+IG SLEAKV +  +D   A+   +        + LQ+
Sbjct: 798 WNQFMSLRDDVNRALEAARNEKVIGKSLEAKVVIGNNDHFKAAEFLQQF------NDLQQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQVEV     NG   N    G+          I +  A G KCERCWNYS  +GS 
Sbjct: 852 LFIVSQVEVTEKVDNG---NEYQHGD----------IRIDHASGEKCERCWNYSEALGSV 898

Query: 653 VEHPTLCSRCYEVL 666
            E   LC RC EV+
Sbjct: 899 GELDHLCPRCQEVV 912


>gi|167630165|ref|YP_001680664.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592905|gb|ABZ84653.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 936

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 196/330 (59%), Gaps = 35/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW NPY+TL PE+EAAQI VFG+M+ +GYIY+G KPV+W  S  TALAEAE
Sbjct: 145 GFKRLGVRGDWENPYITLKPEFEAAQIGVFGEMAKKGYIYKGLKPVYWCASCETALAEAE 204

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        GL +    D  + +WTTTPWT+PAN AV V+ + 
Sbjct: 205 VEYADKE-SPSIYVKFPV----KDLKGLFDA--KDAYVVIWTTTPWTLPANVAVTVHPEF 257

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            Y +V       GD                      +IVA +L+    A  G +   +++
Sbjct: 258 AYVLVR----FGGDR---------------------LIVAKELLAKFMADTGLEGGQVEQ 292

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DLE     HP   R   ++I G+++T E GTG VHTAPGHG ED+     YGL +
Sbjct: 293 TFIGKDLERLVCQHPFFERDS-LLILGEHVTLEQGTGCVHTAPGHGVEDFQVGKAYGLEV 351

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SPVD+ GKFT E G F+G+      N AV++ L ++  LI     +H+YP+ WR K P 
Sbjct: 352 ISPVDNRGKFTAEGGIFAGMTTT-QANPAVIEELKQRGLLIRAGKIKHQYPHCWRCKHPI 410

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRATEQWFAS++GFR+ A++AI +V+W+P
Sbjct: 411 LFRATEQWFASIDGFRKEALEAIDKVRWIP 440



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/349 (37%), Positives = 191/349 (54%), Gaps = 29/349 (8%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           V PQ+     GAD+LRLWV+SVDY  DV   P ++RQ +D YRK+R T RY LGNL+D+ 
Sbjct: 611 VEPQDVIKDMGADILRLWVASVDYRTDVAASPNIMRQTADGYRKIRNTFRYFLGNLYDFD 670

Query: 389 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              ++++Y+D+  +D++A+  L  +++ +  +  +Y+F  ++  +  F  VD+S  Y D+
Sbjct: 671 PKADAVAYEDMIELDRWAMMLLHKLIQRVTAACRNYEFHLVYHAVHNFCAVDMSAIYLDI 730

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLY     S  RRS QTVL     ++VR++AP +   AE+VW  LP A        A
Sbjct: 731 IKDRLYASPAKSQARRSAQTVLYHTADALVRMLAPFISFTAEEVWGYLPGA-----KERA 785

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           + V  + WP  D ++    + +     ++L++R  V+K LE AR  K+IG SLEA+V LF
Sbjct: 786 KTVQTAGWPEADSRYIDAALADKM--ERLLDIRAVVSKALETARQAKVIGHSLEAQVRLF 843

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             DA L S L        + + L   FI+S V VL   P G       +G         +
Sbjct: 844 V-DADLRSFL--------EGEDLATFFIVSSV-VLADAPVGAFSEADVAG---------L 884

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAA 676
            + V++A G KCERCW YS  VG+    PT+C RC   L  + IP   A
Sbjct: 885 AVEVAKAPGQKCERCWIYSEAVGANKARPTICPRCAAALE-EEIPQATA 932


>gi|421526558|ref|ZP_15973165.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
 gi|402257115|gb|EJU07590.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
          Length = 933

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/390 (38%), Positives = 219/390 (56%), Gaps = 55/390 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y +                 K+  GN         +I+A DLV +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLVESAFKDIGIENAELL 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKELEYTTYQHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLSYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VVSPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWV 347
           P IFRATEQWF  +EG   R+  +  I ++ ++P           +  P +     R+W 
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDEINFIPSWGKNRIGSMMETRPDWCISRQRVWG 469

Query: 348 SSV-----DYTGDVMIGPQVLRQMSDIYRK 372
             +     D T + +   ++L ++ D+ R+
Sbjct: 470 VPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 211/332 (63%), Gaps = 26/332 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  VD+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAVDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLFTDDASLA 574
           V ++++    + E   W +I++LR EVNK LE AR G  K+IG+SL+AKV L+T+D +L 
Sbjct: 799 VNNDEYLNPELDEK--WQQIIKLRKEVNKKLEKARQGENKIIGNSLDAKVSLYTEDNTLK 856

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             ++E      + + L+ +FI+S +EV+ S          Y+    VE   K+ I ++ A
Sbjct: 857 EFIKE------NLELLETVFIVSDIEVVDSADEN------YTDAEEVE---KLKIKITHA 901

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +G KCERCW Y   +G+  EHPTLC RC  VL
Sbjct: 902 DGEKCERCWKYD-DLGTDSEHPTLCPRCTAVL 932


>gi|385781420|ref|YP_005757591.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|418574657|ref|ZP_13138824.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
 gi|364522409|gb|AEW65159.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|371978788|gb|EHO96029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
          Length = 917

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVGG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|418559181|ref|ZP_13123727.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
 gi|371975472|gb|EHO92766.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
          Length = 917

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R   +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALESARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    D L ++FI+SQV+V        +  +         G   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKV--------VDKLDEQATAYEHGD-- 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 876 --IAIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|418282941|ref|ZP_12895698.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
 gi|365168538|gb|EHM59876.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
          Length = 917

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R   +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 189/340 (55%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP Q     GAD+ RLWVSS DY  DV I   +L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDDILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    + L ++FI+SQV+V        +  +         G   
Sbjct: 832 ASNDKFNAS---EFLTS---FEALHQLFIVSQVKV--------VDKLDEQATAYEHGD-- 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 876 --IAIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|418620557|ref|ZP_13183361.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
 gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|374822687|gb|EHR86707.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
          Length = 916

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 195/329 (59%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G ++E   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGTIDE---DAQFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K ++I  +      EA  W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYVIAEALAESVSEALGWDKDTIQLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G ++TT++GTG VHTAPGHG++DYV   KY LP
Sbjct: 286 KEFTGKELEYVETQHPFIDR-VSLVINGGHVTTDAGTGCVHTAPGHGEDDYVVGQKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP+DD+G FTEE G+F G+      N AV   L ++ +L+  +   H YP+DWRTKKP
Sbjct: 345 VISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTDKGALLKLDFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEETDF 432



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 200/374 (53%), Gaps = 38/374 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 REQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPNQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +S+   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V +    +LD+            
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVDVDQELLDK------------ 797

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
           W + + LR +VN+ LE AR  K+IG SLEAKV +  +D   A+   +        + LQ+
Sbjct: 798 WNQFMSLRDDVNRALEAARNEKVIGKSLEAKVVIGNNDHFKAAEFLQQF------NDLQQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQVEV     NG   N    G+          I +  A G KCERCWNYS  +GS 
Sbjct: 852 LFIVSQVEVTEKVDNG---NEYQHGD----------IRIDHASGEKCERCWNYSEALGSV 898

Query: 653 VEHPTLCSRCYEVL 666
            E   LC RC EV+
Sbjct: 899 GELDHLCPRCQEVV 912


>gi|425736767|ref|ZP_18855043.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
 gi|425483239|gb|EKU50391.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
          Length = 915

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 201/329 (61%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D++NPY+TL P+YEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVNGDFDNPYITLTPQYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++E   +    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SPSIYVAFDVEDG----KGVVDE---EAKFIIWTTTPWTIPSNVAITVSPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIK- 180
            Y    +Q  + G+                     +II  + +    EA +W  + +++ 
Sbjct: 250 TY----VQMNVNGEK--------------------YIIAEALVDEVAEALEWDKESIVRE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE     HP  +R   +VI GD++TT++GTG+VHTAPGHG++DY    KY L 
Sbjct: 286 KDYNGKDLEYVEAKHPFIDR-ISLVIHGDHVTTDAGTGVVHTAPGHGEDDYFVCQKYDLD 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP+DD+G FTEEAG+F G+      N  V   L E+ +L+  E   H YP+DWRTKKP
Sbjct: 345 VISPIDDKGVFTEEAGQFEGM-FYDKANKEVTDLLTEKGALLKLEFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI   K+
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIDDTKF 432



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/347 (39%), Positives = 194/347 (55%), Gaps = 45/347 (12%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +     GAD+ RLW SSVDY  DV I  ++L+Q +D+YRK+R TLR++LGNL+D+  
Sbjct: 605 VPDKIVKQKGADIARLWASSVDYLADVRISDEILKQTADVYRKIRNTLRFMLGNLNDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++IS  +L  +D+Y L +L     +  ++Y++Y +  I+Q IQ FI V+LSNFY D  
Sbjct: 665 NTDAISESELLEVDKYLLNRLREFTAHTIDNYDNYDYLDIYQEIQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     +  RRS QTVL   LL++ +++API+PH  ++VW ++            E
Sbjct: 725 KDILYIEKQDALKRRSMQTVLYQILLNMTKLLAPIIPHTTDEVWSHMEHV-------EEE 777

Query: 509 FVFESKWPV-------LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
            V  S +PV       L EKW TF           ++LR +VN+ LEVAR  K+IG SLE
Sbjct: 778 SVHLSDFPVKEEVDSALLEKWSTF-----------MKLRDDVNRALEVARNEKVIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           AKV +  +D        +  +   D D L ++FI+SQVE+      G   N    G+   
Sbjct: 827 AKVVMSGNDQF------DTLSFLKDFDDLHQLFIVSQVELEDQVDGGTSYNY---GD--- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
                  I +  A+G KCERCWNY+T +GS  E   LC RC EV++ 
Sbjct: 875 -------IKIEHADGEKCERCWNYATSLGSVGELTNLCPRCQEVVST 914


>gi|323340625|ref|ZP_08080877.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|417974374|ref|ZP_12615195.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
 gi|323091748|gb|EFZ34368.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|346329371|gb|EGX97669.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
          Length = 930

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 205/331 (61%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G+  +W+NPYLTL PE+EAAQI VFG+M+ +G IY+G +PV+WS SS +ALAEAE
Sbjct: 138 DFKRLGIAGEWDNPYLTLHPEFEAAQIRVFGKMAEKGLIYKGLRPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y V           G+L+    +  L VWTTTPWT+PA+  V ++AK 
Sbjct: 198 VEYHDVVSPSAFYGV-----QVKDGKGVLD---TNTYLVVWTTTPWTIPASEGVTIDAKF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            YAVV+     EGD                D+K    ++A++LV     ++G K   + +
Sbjct: 250 DYAVVKP----EGD----------------DRK---FVLAAELVKENAERFGWKNYEVLE 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL G+DLE     HP  + +  + + GD++T ++GTGLVHTAPG+G +DY   +KYGLPI
Sbjct: 287 TLKGADLEYVTARHPFYDDKELLTMIGDFVTLDAGTGLVHTAPGYGDDDYKVGMKYGLPI 346

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +PV+D+G  T++ G  F+G+    D N   +K L E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YAPVNDQGYLTDDCGPDFAGV-FYDDANEVSLKKLKEANVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   +DAI +VK++P
Sbjct: 406 IIFRATPQWFASVDKIRSEILDAIDEVKFLP 436



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 175/343 (51%), Gaps = 36/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +      Q+S+ YRK R T+R++L N  D+  
Sbjct: 607 VPSEVVDKMGAEIIRLWVLSVDTSADVRVSMDSFSQISESYRKFRNTMRFMLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++YDDL   D+Y         K I + Y +Y F  I++ +  F+  +LS FY DVA
Sbjct: 667 AENTVAYDDLEACDKYMEVLANKFTKEILDDYANYNFMDIYKKLINFLTTELSAFYLDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDG 504
           KD +Y     S  RRS QTVL   L+ + +++ P+LPH  E++W+ L     +A   E  
Sbjct: 727 KDVVYVEAEDSHKRRSMQTVLYDVLVRLTKLMTPVLPHTTEEIWEYLKEPEDYAQLAEMP 786

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
             A +  E +   L E W+ F           +++R++V K LE AR  KLIG S EA V
Sbjct: 787 EVAHYDGEVE---LLENWKRF-----------MKVRSDVFKSLENARNEKLIGKSFEAHV 832

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+  D  + + L ++         ++++ I+S ++VLP          P       +  
Sbjct: 833 ELYVSDG-VKAELEKLNA------NVRQLLIVSALDVLPKD------QAPEDA----DDY 875

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           D++ + V  A+G  C RC   +T VGS    P LC  C +V++
Sbjct: 876 DEIKVVVKHADGEVCPRCRRTTTTVGSDARLPQLCDECAKVVS 918


>gi|418993809|ref|ZP_13541446.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG290]
 gi|377746968|gb|EHT70938.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG290]
          Length = 917

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R   +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/374 (38%), Positives = 204/374 (54%), Gaps = 37/374 (9%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTFPVGEIYF 532
            + +++APIL H AE+VW + P     E    A+   V E    +L+ KWRTF       
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLN-KWRTF------- 801

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
               + LR +VN+ LE AR  K+IG SLEAKV + ++D   AS   E  T+    D L +
Sbjct: 802 ----MNLRDDVNRALESARNEKVIGKSLEAKVTIASNDKFNAS---EFLTS---FDALHQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQV+V        +  +         G     I +  A+G KCERCWNYS  +G+ 
Sbjct: 852 LFIVSQVKV--------VDKLDEQATAYEHGD----IAIEHADGEKCERCWNYSEDLGAV 899

Query: 653 VEHPTLCSRCYEVL 666
            E   LC RC +V+
Sbjct: 900 DELTHLCPRCQQVV 913


>gi|417895605|ref|ZP_12539587.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
 gi|341841502|gb|EGS82959.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
          Length = 917

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 194/322 (60%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAEKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y     Q  + GD                  K +     SD V          + ++  
Sbjct: 250 KYG----QYNVNGD------------------KYIIAEALSDAVAEALDWDKASIKLENE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|417891673|ref|ZP_12535730.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
 gi|341850959|gb|EGS91888.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
          Length = 917

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 194/322 (60%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVDS---DAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        QK +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------QKYIVAEALSDAVAEALGWDKDSIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 FSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R+  +DAI
Sbjct: 406 FRATPQWFASISKVRKDILDAI 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALESARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    D L ++FI+SQV+V        +  +         G   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKV--------VDKLDEQATAYEHGD-- 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 876 --IAIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|418888983|ref|ZP_13443119.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1524]
 gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|377754493|gb|EHT78402.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1524]
          Length = 917

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 194/322 (60%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVDS---DAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        QK +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------QKYIVAEALSDAVAEALGWDKDSIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 FSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R+  +DAI
Sbjct: 406 FRATPQWFASISKVRKDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 191/340 (56%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L    K+   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTKSTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALESARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    D L ++FI+SQV+V        +  +         G   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKV--------VDKLDEQATAYEHGD-- 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 876 --IAIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVI 913


>gi|374709387|ref|ZP_09713821.1| isoleucyl-tRNA synthetase [Sporolactobacillus inulinus CASD]
          Length = 923

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 201/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLTL   +EA QI+VFG+M+ +GYIY+ KK V+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWEHPYLTLHKAFEAEQIKVFGEMAKKGYIYKDKKTVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+LN    D  + +WTTTPWT+PAN A+AVN K +
Sbjct: 199 EYKDVK-SYSIYVAFHVTDG----KGVLNH---DEEVIIWTTTPWTMPANLAIAVNPKFE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y+VV+++                      D+K    +VAS+LV  L    +W    V+ +
Sbjct: 251 YSVVQVE----------------------DRK---FVVASELVEKLTKTFEWNEPKVL-R 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G +LE+    HP  +R   ++I GD++T ++GTG VHTAPG G +D+    KYGL I
Sbjct: 285 TVNGKELEHVVCRHPFYDRPS-LMILGDHVTLDAGTGCVHTAPGFGADDFYIGKKYGLDI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD G  T+EA  F G+      N  V++ L E  +L+    + H YP+DWRTKKP 
Sbjct: 344 LCPVDDHGCMTDEAPGFEGV-FYEKANEPVIEKLKEVGALLKVGTFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RATEQWFAS++ FR   + AI +V W+P
Sbjct: 403 IWRATEQWFASIKAFRDDILSAIHEVHWIP 432



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 188/333 (56%), Gaps = 34/333 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGAD++RLWV+SVDY  D  +  ++L Q++++YRK+R T+R++LGNL+D+ V   +   D
Sbjct: 611 YGADIIRLWVASVDYQADARVSNEILGQVAEVYRKIRNTVRFMLGNLNDFTVDKIVPTQD 670

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P ++QY L +L + +     +Y +YQF  +++ +Q +  +DLS FY D+AKD LY    
Sbjct: 671 MPELEQYMLVKLNHFIDTCLNNYSAYQFLNVYKALQNYCSLDLSAFYMDIAKDALYVQPK 730

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTVL   ++++ ++++PI+PH AE++WQN+P A  +           SK+  
Sbjct: 731 NSLVRRSAQTVLYKTVVAMTKILSPIIPHTAEEIWQNIPGALAI-----------SKYVQ 779

Query: 518 LDEKWRTFPVGEIYF----WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           L +     P+ +       W  +L +R +V K LE AR  K IG SLEA V L+    + 
Sbjct: 780 LTDMPENEPIADAEALEKKWTALLAVRDDVFKSLEKARDAKQIGKSLEASVTLYVKPETA 839

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             +         + + L ++ I+S+V V          + P S +      D++ + VS 
Sbjct: 840 FLK---------NVENLDKLLIVSRVLVKDC------EDAPESADRY----DRLSVLVSV 880

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG KCERCW     VG   EHPTLC++C E +
Sbjct: 881 AEGQKCERCWAVLPSVGEDPEHPTLCAQCAETV 913


>gi|422339724|ref|ZP_16420681.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
 gi|355370567|gb|EHG17947.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
          Length = 933

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENAELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEISHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDKINFIP 443



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 209/341 (61%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W+++P A T E    AE +F + W 
Sbjct: 744 KDSIARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESIP-AETRE----AESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AK+ 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKIS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNTLKDFIKE------NLELLETVFIVSDLEVVDSVDENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++G+  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-RLGTDSEHPTLCPRCTAVL 932


>gi|172057960|ref|YP_001814420.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|254782405|sp|B1YIS7.1|SYI_EXIS2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|171990481|gb|ACB61403.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 911

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 197/329 (59%), Gaps = 37/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  D++NPY+TL PE+EAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVLGDYDNPYITLQPEFEAAQIRLFGDMANKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F+++          N   P     +WTTTPWT+PAN  ++V+ +L 
Sbjct: 199 EYQDKR-SAAIYVAFQVMDGK-------NILEPTDHFVIWTTTPWTIPANLGISVSGELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKLVIKKT 182
           YA +E     EG                        IVA  LVP  +EA       I + 
Sbjct: 251 YARIE----HEGKG---------------------YIVAETLVPEVIEALGWEGATIGRV 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+D E  +  HP+ +R+  V++ GD++T E+ TG+VHTAPGHG++D+     YGL +L
Sbjct: 286 FDGADFEYIKAKHPLYDRESLVML-GDHVTAEA-TGVVHTAPGHGEDDFRIGQAYGLDVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD+G  T EA  F GL    D N  +   L+E  +L+     +H YP+DWRTKKP I
Sbjct: 344 CPVDDKGVMTAEAPGFEGL-FYEDANKEIGVALEEAGALLKLSFIKHSYPHDWRTKKPVI 402

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +D I +V+WVP
Sbjct: 403 FRATPQWFASIKDFRAEILDEIKEVQWVP 431



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 187/337 (55%), Gaps = 32/337 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P Q    +GA++LRLWV+SVDY  DV       +Q+S+ YRK+R T+R+LLGNL  +   
Sbjct: 603 PIQIMQQFGAEILRLWVASVDYQSDVRASMDNFKQVSESYRKIRNTVRFLLGNLDQFDHT 662

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +++ DLP  D++   +L+ +V  ++ +Y++Y F  ++Q++  F ++DLS+FY D  K
Sbjct: 663 THRVAFKDLPESDRFMRTKLDQLVGKVKAAYDAYDFMAVYQLLHNFCVLDLSSFYLDYTK 722

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     +  RR+ QTV+   ++++++++AP+LPH A++ W+ +P       G     
Sbjct: 723 DILYIEKEDAPARRAVQTVMYDTVVTLLQLMAPVLPHTADEAWEFVP-------GVETAS 775

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           +F +  P   E      +  I  W   L  R +V K LE AR  KL+G +LEAK+ L  +
Sbjct: 776 IFLTDLPEAPEMTEE-GLALIAKWNSFLVFRDDVLKALEEARAEKLVGKTLEAKLLLAPN 834

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           D + A     + T  H    L+++  +SQ+E + S              Y   G     I
Sbjct: 835 DETKAL----LATIDH----LEQLLQVSQIEFVASAEKS----------YGTTG-----I 871

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V +A+G KCERCW YST++G    HPTLC RC EV+
Sbjct: 872 TVLKADGEKCERCWTYSTELGQDPAHPTLCPRCTEVV 908


>gi|327262525|ref|XP_003216074.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 931

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 27/332 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ A+W+N Y T D +YEA Q+ +F QM  +GY+Y+  KPV WSPS+ TALAEA
Sbjct: 117 SAFIRWGIMANWDNCYHTFDKKYEAKQLHIFHQMFDKGYVYQDYKPVFWSPSTNTALAEA 176

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY + HVSRS+Y  F ++  PP  S +++  LP + L +WTT  WT+PAN AV     
Sbjct: 177 ELEYNQQHVSRSVYIKFPLLKPPPKLSSVIDG-LPAVNLIIWTTQAWTIPANQAVCYMPN 235

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y++V+  +  E                         I+ASD V +  A   T+  +  
Sbjct: 236 SEYSIVKCTNTGE-----------------------HFIIASDRVQSTAALLDTQFDVIS 272

Query: 182 TLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           T  G+D EN    HP +  +Q P ++  +++T   GTGLVHTAP HG EDY  +  + LP
Sbjct: 273 TFKGTDFENGMCSHPTIPGKQSP-LLPANHVTMSKGTGLVHTAPAHGMEDYGVASHHQLP 331

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           +   VD++G+FTE AG +     VL +GN AV++ L    +L+ EE + H YPYDWRTKK
Sbjct: 332 MDCLVDEKGRFTEAAGSELQKKAVLDEGNEAVIQMLHGAKNLLKEEKFVHSYPYDWRTKK 391

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I RA++QWF      + AA +A+ +VK VP
Sbjct: 392 PVIIRASKQWFIDTANLKSAAQEALKKVKCVP 423



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 169/345 (48%), Gaps = 39/345 (11%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGAD+LR WV+  +   +V+IGP VL    +   KLR TLR+LLGNL  +    +SI 
Sbjct: 609 PPYGADILRWWVAESNVFTEVLIGPAVLNSAREDINKLRNTLRFLLGNLASFNPETDSIP 668

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             D+ +IDQY L  L      + ++Y+ Y + K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 669 TSDMYLIDQYILHLLHGYATKVTQAYKEYDYGKVIRLLEAFHTRELSSFYFSIVKDRLYC 728

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+A L ++VR  APILPHLAE+V+Q LP+         ++ VF S 
Sbjct: 729 EEEKDPKRRSCQTALAAVLDTMVRSFAPILPHLAEEVFQYLPYR------KESDSVFRSG 782

Query: 515 WPVLDEKWRTFPVGEIYFWGKI-LELRTEVNKVLEVARTGKLIG-SSLEAKVYLFTDDAS 572
           W        T PV     W K  LE   E    +  A  G + G ++LE +V L  +   
Sbjct: 783 W------MNTSPV-----WKKPGLEEAVEGACAMRDAFLGSIAGKNALEYQVVLVIEPGL 831

Query: 573 LASRL----REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV--EGKD- 625
           L   +     E C++      L  I + SQ  +L   P  +  +    G +L+  EG D 
Sbjct: 832 LFELMEVLQHEECSS---TSQLNEIMMASQTTLLTEVPREMATDDIIEGTFLINLEGGDI 888

Query: 626 ----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                  + V      KC RC  Y+          T C+RC E+L
Sbjct: 889 REESTYKVMVLPVAKLKCLRCRRYTADSTE-----TPCARCREIL 928


>gi|57530344|ref|NP_001006397.1| isoleucine--tRNA ligase, mitochondrial precursor [Gallus gallus]
 gi|82233833|sp|Q5ZKA2.1|SYIM_CHICK RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|53131721|emb|CAG31841.1| hypothetical protein RCJMB04_12b19 [Gallus gallus]
          Length = 1000

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 192/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F R+G+ ADW N Y T DP+YEA Q+ VF +M  +G+IY+  KPV WSPS++TALAEA
Sbjct: 182 AAFIRWGIMADWANCYRTFDPKYEANQLRVFHKMYDKGFIYQDYKPVFWSPSAKTALAEA 241

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E HVSRS+Y  F ++ +PP  + +++   P   + VWTT PWTVPAN AV     
Sbjct: 242 ELEYNEQHVSRSVYMKFPLLKSPPKLASVIDGSSP-ASVLVWTTQPWTVPANQAVCYMPD 300

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y+VV+  +  E                        +I+A+D V +  A   T+  +  
Sbjct: 301 AEYSVVKCATTGE-----------------------HLILAADRVESTAAVLDTQFEVIS 337

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DL +    HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP 
Sbjct: 338 TCKGVDLADGSCAHPTIAGRVSPLLPANHVTMTKGTGLVHTAPAHGMEDYNVASHHQLPT 397

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG +    +VL +GN AV+K L    SL+ EE Y H YPYDWRTKKP
Sbjct: 398 ECLVDESGHFTEAAGPELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKP 457

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA++QWF +    +  A +A+ +VK +P
Sbjct: 458 MIIRASKQWFVNTANVKATAQEALKKVKIIP 488



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 170/343 (49%), Gaps = 32/343 (9%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 674 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIP 733

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 734 PSEMYIVDQYMLHLLQDYGSKVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYC 793

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LP+         +E VF + 
Sbjct: 794 EEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLPYK------KDSEGVFRTG 847

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+   + E       +E    +      + +GK   ++LE +V +   +  L 
Sbjct: 848 WINASSGWKKPGIEE------AIEGACAMRDSFLGSISGK---NALEYEVIIVI-EPGLL 897

Query: 575 SRLREMCTAKHDA--DTLQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
             L E   A+  +    L  I + SQ  +L   P     +     G +L+  EG D    
Sbjct: 898 FELMEALQAEESSRVSQLNEIMMASQTTLLSEIPKETPADANIVKGNFLINLEGGDIREE 957

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               +       +KC RC  Y++   S     T C RC +V+A
Sbjct: 958 SSYQVIALPTTKAKCPRCRRYTSDSSS-----TPCPRCLKVIA 995


>gi|407477641|ref|YP_006791518.1| Isoleucine--tRNA ligase [Exiguobacterium antarcticum B7]
 gi|407061720|gb|AFS70910.1| Isoleucine--tRNA ligase [Exiguobacterium antarcticum B7]
          Length = 911

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 200/330 (60%), Gaps = 39/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  D++NPY+TL PE+EAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVLGDYDNPYITLQPEFEAAQIRLFGDMANKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F+++          N   P     +WTTTPWT+PAN  ++V+ +L 
Sbjct: 199 EYQDKR-SAAIYVAFQVMDGK-------NILEPTDHFVIWTTTPWTIPANLGISVSGELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEA-KWGTKLVIKK 181
           YA +E Q   +G                        IVA  LVP  +EA  WG +  I +
Sbjct: 251 YARIEYQG--KG-----------------------YIVAETLVPEVIEALGWG-EATIGR 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G+D E  +  HP+ +R+  V++ GD++T E+ TG+VHTAPGHG++D+     YGL +
Sbjct: 285 VFNGADFEYIKAKHPLYDRESLVML-GDHVTAEA-TGVVHTAPGHGEDDFRIGQAYGLDV 342

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F G+    D N  +   L+E  +L+     +H YP+DWRTKKP 
Sbjct: 343 LCPVDDKGVMTAEAPGFEGM-FYEDANKEIGIALEEAGALLKLSFIKHSYPHDWRTKKPV 401

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR   +D I  V+WVP
Sbjct: 402 IFRATPQWFASIKDFRAEILDEIKGVQWVP 431



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 187/341 (54%), Gaps = 40/341 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 389
           P Q    +GA++LRLWV+SVDY  DV       +Q+S+ YRK+R T+R+LLGNL  +   
Sbjct: 603 PIQIMQQFGAEILRLWVASVDYQSDVRASMDNFKQVSESYRKIRNTVRFLLGNLDQFDHT 662

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +++ DLP  D++   +L+ +V  ++ +Y++Y F  ++Q++  F ++DLS+FY D  K
Sbjct: 663 THRVAFADLPESDRFMRTKLDQLVGKVKAAYDAYDFMAVYQLLHNFCVLDLSSFYLDYTK 722

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     +  RR+ QTV+   ++++++++AP+LPH A++ W+ +P       G     
Sbjct: 723 DILYIEKEDAPARRAVQTVMYDTVVTLLQLMAPVLPHTADEAWEFVP-------GVETAS 775

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           +F +  P   E      +  I  W   L  R +V K LE AR  KL+G +LEAK+ L   
Sbjct: 776 IFLTDLPETPEVSEE-GLALIAKWNSFLVFRDDVLKALEEARAEKLVGKTLEAKLQL--- 831

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW- 628
            A  A     + T +H    L+++  +SQ+E                    VE  +K + 
Sbjct: 832 -APNAETTALLATIEH----LEQLLQVSQIE-------------------FVESAEKTYG 867

Query: 629 ---IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              I V +A+G KCERCW YST++G    HPTLC RC EV+
Sbjct: 868 TTAITVLKADGEKCERCWTYSTELGQDSAHPTLCPRCTEVV 908


>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 920

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 206/329 (62%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK+ GV  DW+NPY+TL  +YEA QI VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 140 FKQLGVRGDWDNPYVTLTHDYEAQQIRVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V      SG       D  + +WTTTPWT+PAN A+AV+  L+
Sbjct: 200 EYHDKR-SSSIYVAFKVVDGKGVLSG-------DEEVVIWTTTPWTIPANLAIAVHPDLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIKKT 182
           Y  VE               K R            ++VA  ++  LEA+   +   + +T
Sbjct: 252 YVSVET--------------KGRK-----------LVVAKGMLEHLEAEGVVESGDVHQT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GSDLE     HP+ +R+  +V+ GD++T ++GTG VHTAPGHG++DY+   KYGL IL
Sbjct: 287 FKGSDLEGILTKHPLYDRESLMVL-GDHVTLDAGTGCVHTAPGHGEDDYIVGQKYGLDIL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD+G FT+EA  FSGL      N  + + LDE+ +L+    + H YP+DWRTKKP I
Sbjct: 346 CPVDDKGHFTDEAPMFSGL-FYDAANKPITEALDERGALLKLNFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS++ FR+  +  I  V+W+P
Sbjct: 405 YRATSQWFASIKDFREDLLKEIEDVQWMP 433



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 190/343 (55%), Gaps = 31/343 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P       GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 IPANVMKQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLDGFVP 663

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++S+DDL  +DQY + +L +++ + R++Y+ YQF  I+  +Q F  V+LS+FY D++
Sbjct: 664 SEHAVSFDDLGELDQYMMLKLNDLITSTRKAYDEYQFAGIYNKVQNFCTVELSSFYMDIS 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP--FAYTLEDGSA 506
           KD LY        RR  QTV+   L S+V++++PIL H +++VW  +P   A  ++    
Sbjct: 724 KDTLYVEHADHEDRRRIQTVMYHTLTSLVKLMSPILSHTSDEVWAYIPETEAENVQLTDM 783

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            E    S +  + EKW  F           + LR +V K LE AR  K I  +L A + +
Sbjct: 784 PEPKDFSGFENMREKWDRF-----------MLLRDDVMKALEDARNEKGIKKNLHASIKV 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           + D+A  AS L+        +  L ++FI S  +V      G +++ P    +     D 
Sbjct: 833 YADEAD-ASLLQA-------SGNLAQLFITSSAKVA-----GTVKDAPGDAVHY----DH 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           + + V RAEG  CERCW  +  +G+   HPTLC RC +++   
Sbjct: 876 LSVLVERAEGETCERCWTVTADLGTDESHPTLCPRCTDIVVTH 918


>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|10121057|pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
          Length = 917

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   +Y LP++
Sbjct: 288 YTGKELEWVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 193/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|418307414|ref|ZP_12919127.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
 gi|365245681|gb|EHM86297.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
          Length = 917

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 191/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +     +          D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDDKGAVDS-------DAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        QK +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------QKYIVAEALSDAVAEALGWDKDSIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 FSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R+  +DAI
Sbjct: 406 FRATPQWFASISKVRKDILDAI 427



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 34/340 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALESARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            ++D   AS   E  T+    D L ++FI+SQV+V        +  +         G   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKV--------VDKLDEQATAYEHGD-- 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I +  A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 876 --IAIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|336420097|ref|ZP_08600339.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
 gi|336162059|gb|EGN65048.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
          Length = 933

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 209/341 (61%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D++L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDSALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDPEHPTLCPRCAAVL 932


>gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 916

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 190/330 (57%), Gaps = 36/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV ADW +PYLTL P YEA QIEVFG+M+ +GYIYRG +PV+W P+  TALAEAE
Sbjct: 139 EFKRLGVRADWEHPYLTLMPFYEARQIEVFGEMAKRGYIYRGLRPVYWCPTCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY     S SIY  FR+        GLL     D    +WTTTPWT+PAN AV ++  L
Sbjct: 199 IEYAPKE-SPSIYVRFRVKDG----KGLLPS---DAAFVIWTTTPWTLPANVAVCLHPDL 250

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT-LEAKWGTKLVIKK 181
            Y +V +                          K  ++VA  L+P+ LE     K  I+ 
Sbjct: 251 DYVLVRV-------------------------GKERLVVAEALLPSFLEVLGVEKGEIEA 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G +LE     HP   R   VV+   Y++ E GTG VH APGHG+ED++T  +Y LP+
Sbjct: 286 RFKGKELEGVVLEHPFFERDSLVVV-DTYVSAEQGTGCVHNAPGHGEEDFITCRRYNLPV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SPVD  G FTEE G F+G   L + N  ++  L  + +L+      H+YP+ WR K P 
Sbjct: 345 ISPVDGRGYFTEEGGPFAGKFYL-EANEDIMAELRRRGALLAAGRITHQYPHCWRCKNPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            FRATEQWFAS++GFR+ A+ AI  V+W+P
Sbjct: 404 FFRATEQWFASIDGFREQALKAIRSVRWIP 433



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 186/351 (52%), Gaps = 49/351 (13%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           ++G V  V PQE     GAD+LRLWV S DY GD+     +LRQ+++ YRK+R T R+LL
Sbjct: 602 SLGNV--VDPQEVMTKLGADILRLWVCSADYRGDLAASDNILRQVAEAYRKIRNTFRFLL 659

Query: 382 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
            NL+D+    ++ Y+ L  +D+Y L +LE + + + ++YE Y+F  ++  I  F +VDLS
Sbjct: 660 ANLYDFDPAEALPYEQLLELDRYLLMRLEEVKRRVLKAYEEYEFHLVYHSIYSFCVVDLS 719

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL------ 495
            FY +V KDRLY     +  RR+ QTV    LL ++R++ P+L    E++W+ +      
Sbjct: 720 AFYLNVIKDRLYCSLPYARERRAAQTVQYRVLLDLLRLLVPVLAFTTEEIWRYVKVVGEK 779

Query: 496 PFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKL 555
           P +  L D      + E    +LD    +        W K+L +R EV   LE AR  KL
Sbjct: 780 PVSVQLLD------LPEPDDSLLDPDLAS-------RWEKLLRVREEVLVALEKARKEKL 826

Query: 556 IGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPY 615
           IG SLEAKV LF      A  L    +A+ D   L+ I ++SQ+E+LP            
Sbjct: 827 IGDSLEAKVRLFVK----AEELEWWNSARED---LRTICLVSQLELLPG----------- 868

Query: 616 SGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                    + + + V  AEG KC RCW YS +VG    +P LC RC  V+
Sbjct: 869 ---------EGIKVEVEPAEGQKCARCWMYSPEVGKDENYPELCPRCAAVV 910


>gi|387780303|ref|YP_005755101.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|344177405|emb|CCC87872.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           LGA251]
          Length = 917

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 196/324 (60%), Gaps = 36/324 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK-- 180
           +Y    +                        +K +     SD V   EA    K+ IK  
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVA--EALDWDKVSIKLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP
Sbjct: 286 KEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP
Sbjct: 345 VISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAI 324
            IFRAT QWFAS+   RQ  ++AI
Sbjct: 404 VIFRATPQWFASISKVRQDILEAI 427



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7.1|SYI_STACT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/325 (43%), Positives = 195/325 (60%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVNGDFNDPYITLKPEYEAAQIRLFGEMADRGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++E   D    +WTTTPWT+P+N A+ V+  L
Sbjct: 198 IEYHDKR-SPSIYVAFDVKDG----KGVVDE---DAKFIIWTTTPWTLPSNVAITVHPDL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  + G+                       +V  DLV  +  + G     + +
Sbjct: 250 KYG----QYNVNGEK---------------------YVVGQDLVEEVAEELGWDKEDIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G ++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEYVETQHPFIDR-VSLVINGLHVTTDAGTGAVHTAPGHGEDDYIVGQKYNL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G+F G+      N AV   L E  SL+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLKENGSLLKLKFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASISKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/375 (38%), Positives = 210/375 (56%), Gaps = 38/375 (10%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 574 RGQSPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQIVKQKGADIARLWVSSVDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q +D+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L    +
Sbjct: 631 VRISDEILKQTADVYRKIRNTLRFMLGNVNDFNPETDAVPESDLLEVDRYLLNRLREFTE 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +I   Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 SIINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKQDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP--VLDEKWRTFPVGEIYF 532
            + +++APIL H +E+VW  +P  +  E+      + E   P   L EKW TF       
Sbjct: 751 DMTKLLAPILAHTSEEVWSYIP--HVKEESVHLADMPEVVKPDEELLEKWNTF------- 801

Query: 533 WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQR 592
               ++LR +VN+ LE AR  K+IG SLEAKV + ++++  A+   +      D + L +
Sbjct: 802 ----MKLRDDVNRALEEARNNKVIGKSLEAKVIIGSNESFDAADFLK------DFENLHQ 851

Query: 593 IFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSF 652
           +FI+SQVEV     +G   N  Y G+          I V  A+G KCERCWNYST++GS 
Sbjct: 852 LFIVSQVEVEEKVEDG---NEYYYGD----------IKVVHADGEKCERCWNYSTELGSV 898

Query: 653 VEHPTLCSRCYEVLA 667
                LC RC  V+A
Sbjct: 899 NGLDHLCPRCQGVVA 913


>gi|417796573|ref|ZP_12443781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
 gi|334268563|gb|EGL86997.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
          Length = 917

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 192/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G  TEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVLTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWV+S DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVTSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|336236132|ref|YP_004588748.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|423720665|ref|ZP_17694847.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans
           TNO-09.020]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|335362987|gb|AEH48667.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|383366018|gb|EID43309.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans
           TNO-09.020]
          Length = 923

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 192/328 (58%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL  EYEA QI+VFG+M+ +G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLTREYEAQQIKVFGEMAKKGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L+    D  + +WTTTPWT+PAN A+AV+  L 
Sbjct: 199 EYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTTTPWTIPANLAIAVHPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VVE                           K  +  A       E  W    V+K T+
Sbjct: 251 YQVVETNG-----------------------AKYVVAAALLASVAKEIGWDDVTVVK-TI 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DLE     HP  +R   +V+ G+++TT++GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 287 KGKDLEYVVAKHPFYDRDS-LVVCGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGLDVLC 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVD+ G  T EA  F GL    + N A+ + L+E  +L+      H YP+DWRTKKPTIF
Sbjct: 346 PVDERGYMTSEAPGFEGL-FYDEANKAITQKLEEVGALLKLSFITHSYPHDWRTKKPTIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++  R   + AI + KW+P
Sbjct: 405 RATTQWFASIDKIRGELLQAIKETKWIP 432



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 188/342 (54%), Gaps = 32/342 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDSILKQVAEVYRKIRNTFRFMLGNLFDFNP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++  ++L  +D+Y L +L  +++ ++++YE+Y F  I+  +  F  VDLS FY D A
Sbjct: 663 ETDAVPVNELREVDRYMLVKLNRLIEKVKQAYETYDFASIYHDVNNFCTVDLSAFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD LY        RRS QTVL   ++++ +++APILPH AE+VW+++P     A +++  
Sbjct: 723 KDILYIEAPNDRARRSIQTVLYEAVVALTKLVAPILPHTAEEVWEHIPNRKEKAESVQLV 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
              E +       L  KW  F           + LR +V K LEVAR  K+IG SL A V
Sbjct: 783 DMPEAINIDGAEALVAKWDAF-----------MSLRDDVLKALEVARNEKVIGKSLNASV 831

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++         +R++  +    + ++++FI+S+  +            P   +      
Sbjct: 832 TVYP-----TKEVRQLLASIE--EDVKQLFIVSEFTIADDYEKA-----PEDAQKFA--- 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             V I V +AEG  CERCW  + +VG   EHPTLC RC  ++
Sbjct: 877 -NVAIIVKQAEGETCERCWVVTPEVGKDSEHPTLCPRCARIV 917


>gi|444732259|gb|ELW72563.1| Isoleucyl-tRNA synthetase, mitochondrial [Tupaia chinensis]
          Length = 1013

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 198 SAFIRWGIMADWNNCYYTFDRKYEAKQLRIFYQMYEKGLVYRSYKPVFWSPSSRTALAEA 257

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F +   PP  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 258 ELEYNPEHVSRSIYVKFPLSKPPPKLASLIDGSSP-VSFLVWTTQPWTIPANQAVCYMPE 316

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V+  S   GD                     F I+A+D V ++ +  GT   +  
Sbjct: 317 SKYAIVKCSS--SGD---------------------FYILAADKVASIASTLGTTFEVIS 353

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 354 TFSGVDLENATCSHPLVPDKVSPLLPANHVTMTKGTGLVHTAPAHGMEDYAVASQHSLPV 413

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V++ G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 414 DCLVNEAGIFTDVAGPELQNKSVLEEGTDVVIKMLQTAKNLLKEERLVHSYPYDWRTKKP 473

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 474 VVIRASKQWFINITDIKTTAKELLKKVKFIP 504



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 166/345 (48%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGAD LR WV+  +   +V IGP VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 690  PPYGADTLRWWVAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNVAGFNPETDSIP 749

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  L+++   I ++Y  Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 750  VKNMYVIDQYMLHLLQDLANKITDAYRQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 809

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 810  EKENDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP--YLKEPKS----VFRTG 863

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 864  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 913

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTP-NGLIRNIPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P       I   G +L+  EG D    
Sbjct: 914  FEIIEMLQAEETSSTSQLNELMMASQSTLLAQEPLEKPADVIELKGTFLINLEGGDIREE 973

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV+ 
Sbjct: 974  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVG 1011


>gi|392867100|gb|EAS29707.2| isoleucine-tRNA ligase [Coccidioides immitis RS]
          Length = 1012

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 148/342 (43%), Positives = 198/342 (57%), Gaps = 39/342 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  KPV+WSPS+RTALAE
Sbjct: 145 MKGFREWGVMGDWENYWKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTRTALAE 204

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGLAVWTTTPWTVPANA 114
           AELEY + HVS +    F + + P      P  SG       ++   +WTTTPWT+PANA
Sbjct: 205 AELEYRDDHVSHAALVKFPLATVPTEIREHPLASG------DEIYAVIWTTTPWTLPANA 258

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           A+AV+  L Y +V  QS   G      +++     +L++  KV + VA           G
Sbjct: 259 AIAVSKDLNYIIV--QSERHGKLLIAESRREYVEQLLEESLKVLMSVA-----------G 305

Query: 175 TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           T L+             R +    +  C  VI  D++T ESG+GLVH APGHG EDY   
Sbjct: 306 TSLLSS---------TYRPLFKDTDGSCQPVIAADFVTDESGSGLVHCAPGHGMEDYEVC 356

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL+E+  L+ +  Y+H
Sbjct: 357 LEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKH 416

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 417 KYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 335 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 391
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T   +RR+ QT +      +  ++ P++P L E+ W++ P        SA +   
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTPDVIK----SAVDHPL 840

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
                  D KW    + + Y    I      V  + E AR  K +GSSL++ V+L   D+
Sbjct: 841 RRIMVPPDPKWGNLFLEKSY--SAIAAANAAVKMMQETARVKKQMGSSLQSYVHLNVPDS 898

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPY---SGEYLVEGK---- 624
              S  +E+ TA+     L   F++S V +      G    +P+   + E+  EG+    
Sbjct: 899 --VSVFQELGTAE-----LADFFVVSSVTL------GSGSEVPHEVENAEWSYEGQFELP 945

Query: 625 ----DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                K WI  +  EG KC RCW Y   V   +    LC RC +V+
Sbjct: 946 SGEMGKAWI-YTPVEG-KCARCWRY--LVPESMAEDALCQRCEDVV 987


>gi|237743224|ref|ZP_04573705.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433520|gb|EEO43732.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 712

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             Y +                 K+  GN         +I+A DL  +     G K   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIKNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQF 425
           D+  ID++AL +LE + +++ ESY+ Y+F
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEF 712


>gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 197/334 (58%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIK 180
             Y +                 K+  GN         +I+A DL  +     G     + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIGNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDPEHPTLCPRCAAVL 932


>gi|282908485|ref|ZP_06316315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327547|gb|EFB57830.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 433

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 56  DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 115

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 116 IEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 167

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 168 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 205

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 206 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 264

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 265 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 323

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 324 FRATPQWFASISKVRQDILDAI 345


>gi|340754220|ref|ZP_08690982.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|422316126|ref|ZP_16397527.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
 gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|404591495|gb|EKA93629.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
          Length = 933

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 199/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW++PYLTLDP +EA Q+E+FG++  +GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDHPYLTLDPRFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKNIGIENAELL 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYQHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 207/332 (62%), Gaps = 26/332 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L+++ +++APIL   AE++W+NLP      +   AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWENLP-----AEAREAESVFLADWY 798

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLFTDDASLA 574
           V ++++    + E   W +I++LR EVNK LE AR G  K+IG+SL+AKV L+T+D +L 
Sbjct: 799 VNNDEYLNPELDEK--WQQIIKLRKEVNKKLEKARQGENKIIGNSLDAKVSLYTEDNALK 856

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             ++E      + + L+ +FI+S +EV  S+ +              E  + + I ++ A
Sbjct: 857 EFIKE------NLELLETVFIVSDIEVTDSSDDNFT---------AAEEIENLKIKITHA 901

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +G KCERCW Y   +G+  EHPTLC RC  VL
Sbjct: 902 DGEKCERCWKYD-DLGTDPEHPTLCPRCTGVL 932


>gi|150020359|ref|YP_001305713.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166229776|sp|A6LK77.1|SYI_THEM4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|149792880|gb|ABR30328.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 908

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 148/391 (37%), Positives = 216/391 (55%), Gaps = 60/391 (15%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YRG KPV+W P+ +TALAEAE
Sbjct: 139 QFKRLGVRGDWDNPYLTLDPKYEKHILNIFKTLVKNGNVYRGNKPVYWCPTCKTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F              E   +  + +WTTTPWT+PAN A+AV+ + 
Sbjct: 199 VEYHD-HSSPSIYVKF--------------ELEKNTYIVIWTTTPWTLPANVAIAVHPEY 243

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  +++                  GN        + IVA  L+    A+   +  + + 
Sbjct: 244 DYVKIKV------------------GNE-------YWIVAEGLLNKFAAETEIEYSVVEK 278

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE+ +  HP  NR+  +V+  DY+T E GTG VHTAPGHG EDY+T +KY LP+L
Sbjct: 279 FKGKDLEHKKAKHPFMNRESLIVLA-DYVTLEDGTGCVHTAPGHGAEDYLTGIKYNLPVL 337

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV++EG FT++AGK++GL +  D N  +++ L++   LI  +  EH YP+ WR K P I
Sbjct: 338 SPVNEEGVFTKDAGKYAGLKIW-DANKVIIEDLEKLGVLIKSQKIEHSYPHCWRCKNPVI 396

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSV 350
           FRAT QWF SV+  G R+  ++ I +V+W P           +E P +     R+W + +
Sbjct: 397 FRATPQWFISVDRNGLREKVLEEIKKVEWHPKWGENRITAMVKERPDWTISRQRVWGTPI 456

Query: 351 -----DYTGDVMIGPQVLRQMSDIYRKLRGT 376
                   G+V +  +V+    +I  + +GT
Sbjct: 457 PAIKCKECGEVFLDEKVIDNFVNIVEE-KGT 486



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 189/336 (56%), Gaps = 31/336 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  + Y+KLR TLRYLLGNL+D+   
Sbjct: 599 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVETYKKLRNTLRYLLGNLNDFEEN 658

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
             + ++ L  +D++AL +L+ ++  + E +E Y++ K++ ++ R+  V+LS  Y D+ KD
Sbjct: 659 MIVPFEKLLPLDKWALGRLQEVISQVTEHFEKYEYSKVYSLLNRYCTVELSATYLDIIKD 718

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           R+Y     S  RRS QTV+   L S+++++APIL   AE+ +Q  PF          E V
Sbjct: 719 RIYVEAKGSIYRRSAQTVMYYILQSLIKMLAPILVFTAEEAYQLSPF-------KKYETV 771

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
               WP + E++    + E +    IL +R +V K LE AR   +IG SL+AKV +   +
Sbjct: 772 HLEYWPEVKEEYIDNQIMEDF--KMILLIRDDVLKALEEARKQDIIGHSLDAKVTIEGLN 829

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
            ++     +M   KH  D L  IFI+S VE+     NG  +     GE+       V + 
Sbjct: 830 DNV-----QMIIEKH-KDYLSEIFIVSDVEI----GNGQTK-----GEF-------VSVT 867

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V +A+G KC+RCW YS  VG    +  +C RC  VL
Sbjct: 868 VEKAKGEKCQRCWKYSEDVGKDDTYKDVCPRCAAVL 903


>gi|336401824|ref|ZP_08582581.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
 gi|336160422|gb|EGN63470.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
          Length = 933

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 197/334 (58%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +NA 
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNAN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIK 180
             Y +                 K+  GN         +I+A DL  +     G     + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFEDIGIGNFELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLAYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A+++YL +   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHILKMQEITHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FI+S +EV+ S                 E  +
Sbjct: 848 LYTEDNALKEFIKE------NLELLETVFIVSDLEVVDSADENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++GS  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-KLGSDPEHPTLCPRCAAVL 932


>gi|418988014|ref|ZP_13535687.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1835]
 gi|377719802|gb|EHT43972.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1835]
          Length = 917

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 192/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+  GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRSLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVDG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  +DAI
Sbjct: 406 FRATPQWFASISKVRQDILDAI 427



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|332638200|ref|ZP_08417063.1| isoleucyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 929

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 200/333 (60%), Gaps = 35/333 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR G+ ADW+NPYLTL PE+EAAQ+ VFG+M+ +  IYRGKKPV WS SS +ALA 
Sbjct: 136 MADFKRLGISADWDNPYLTLLPEFEAAQLRVFGEMAKKNLIYRGKKPVFWSWSSESALAM 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY   H   S  A F          GLL+    D     WTTTPWTVPA+ A+A+NA
Sbjct: 196 AEIEY---HDIESDTAFFS--ERVKDGKGLLDN---DTYFIAWTTTPWTVPASQALALNA 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
             +Y+ ++ +          ++KK               IVAS L+  +  K+G  +  +
Sbjct: 248 DFEYSQIQPKG---------SDKK--------------YIVASALLGAVAPKFGWDEYEV 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G +LE     HP  +R+  +V+  DY+T ++GTG VHTAPG G++D+ T  +Y +
Sbjct: 285 VATFTGKELEMATTEHPFMDREI-LVVNADYVTADAGTGAVHTAPGFGEDDFATGQRYNM 343

Query: 240 PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           P++  VDD+GK T EAG  F G+    D +   ++ L+E  +LI+ EP  H YP+DWRTK
Sbjct: 344 PVIMNVDDQGKMTAEAGPDFEGV-FYQDADKVSLQKLEEADALILHEPVVHSYPFDWRTK 402

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRA  QWFAS++ FRQ  +DA+  VK+ P
Sbjct: 403 KPVIFRAVPQWFASIDSFRQDILDALDDVKFQP 435



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 50/340 (14%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +   +L Q S+ YRK+R T+R+LL N  D+    ++I++DD
Sbjct: 615 GAEIIRLWVTSVDSSADVRVSMDLLSQTSETYRKIRNTMRFLLANTADFDPKADTIAFDD 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY   +   +V +I+ +Y+ Y F  + +++  FI VDLS FY D AKD LY    
Sbjct: 675 LVAADQYFYARFNKLVADIKAAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAP 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLEDGSAAEFVFE 512
               RRS QTVL   L+ + +++ PILPH AE++++ L      FAY  E  + A+    
Sbjct: 735 KGHARRSLQTVLYKVLVDLDKLLLPILPHTAEEIFEYLEHEEGDFAYLTEMPAVADIANA 794

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF-TDDA 571
            +   L  KW  F           + LR  VNK LEVAR  KLIG   EA V LF TDD 
Sbjct: 795 DE---LMAKWSEF-----------MTLRDAVNKALEVARDAKLIGKPAEAAVTLFLTDDQ 840

Query: 572 -----SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
                SL   +R              + ++SQ+ V  +       +            D 
Sbjct: 841 KAWLDSLGQDVR-------------VLLLVSQLHVASADEADDATDF-----------DG 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V+ AEG +  R   Y T +G+  + P L +   +++
Sbjct: 877 YKIAVAHAEGEESPRDRMYHTDLGADPDFPMLSAHEAQIV 916


>gi|375088334|ref|ZP_09734674.1| isoleucine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
 gi|374562372|gb|EHR33702.1| isoleucine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
          Length = 926

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 193/331 (58%), Gaps = 36/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPY+TL P+YEAAQI VFG+M+ +GYIYRG KP++WSPSS +ALAEAE
Sbjct: 138 DFKRLGVQGEWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRGLKPIYWSPSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     SIY  F +         +L +   D    +WTTTPWT+P+N A+ V    
Sbjct: 198 IEYQDVR-GPSIYVAFDVKDG----GDVLED---DTQFVIWTTTPWTIPSNVAITVRGDG 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            Y+V E                         Q+ V   +A  L   +  K G   + + K
Sbjct: 250 DYSVYEADG----------------------QRYV---LADRLAEEVAEKIGWQDIKLVK 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  G++LE     HP  +R   +++G D++T ++GTGLVHTAPGHG +D+V   KY LP+
Sbjct: 285 SFKGAELEGLVAHHPYLDRDSHLILG-DHVTFDAGTGLVHTAPGHGDDDFVVGQKYNLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SP+D +G FT+E  +F G+    D N+     L EQ  L+  E + H YP+DWRTKKP 
Sbjct: 344 ISPIDAQGYFTDEIPEFEGM-FYDDANIKSTDLLKEQNKLLHLEFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           IFRAT QWFAS++ FR   + A+ +  W+ P
Sbjct: 403 IFRATPQWFASIDKFRDDILKAVEETDWIQP 433



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 179/337 (53%), Gaps = 26/337 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P   A   GAD++RLW +SVD + DV +  ++L Q++++YRK+R T+R+L+ N  D+   
Sbjct: 604 PNDVADDLGADLIRLWAASVDTSADVRVSEEILGQVAEVYRKIRNTIRFLIQNTEDFNYA 663

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + I+YD+L   DQY L QL   VK+   +Y++Y F +I++ I +F  V +SNFY +V+K
Sbjct: 664 TDGIAYDNLRGFDQYILSQLNTTVKDALAAYDNYNFSEIYKEINQFCTVVMSNFYMNVSK 723

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY      + RR+ QTV    +L + +++ PI+PH AE++W  L            EF
Sbjct: 724 DVLYIDAPNGYERRAMQTVFYEVVLKLAKLLTPIIPHTAEEIWSYL--------DEEEEF 775

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
              S  P ++E   +  +  +  W K + +R  V K  EVAR  K+IG   EAK  L+ +
Sbjct: 776 AQLSDLPDVEELAGSAEL--VAKWDKFMTIRDYVLKANEVAREKKVIGKDFEAKTTLYVN 833

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                +  +E+  +  DAD L+ I I S++ + P      + + P   + +++  D V +
Sbjct: 834 -----AENKELLESL-DAD-LRLILITSELTIKP------LADKPTDDDQVIDF-DGVSV 879

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVE-HPTLCSRCYEV 665
            V R  G  C RC   S  V +       LC RC+ +
Sbjct: 880 KVERMSGEVCTRCRITSEDVVTLPNGEDVLCPRCHAI 916


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + HVS SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENAELI 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI G+++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYTTYKHPFLER-TGLVILGNHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDKINFIP 443



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/341 (41%), Positives = 209/341 (61%), Gaps = 44/341 (12%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 515
             S  RR+ QTV+   L+++ +++APIL   AE++W+++P A T E    AE +F + W 
Sbjct: 744 KDSIARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESIP-AETRE----AESIFLADWY 798

Query: 516 --------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVY 565
                   P LDEKW+           +I++LR EVNK LE AR G  K+IG+SL+AKV 
Sbjct: 799 VNNDEYLKPELDEKWQ-----------QIIKLRKEVNKKLEKARQGENKIIGNSLDAKVS 847

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+T+D +L   ++E      + + L+ +FIIS +EV+ S                 E  +
Sbjct: 848 LYTEDNTLKDFIKE------NLELLETVFIISDLEVVDSVDENFTD---------AEEIE 892

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K+ I ++ A+G KCERCW Y  ++G+  EHPTLC RC  VL
Sbjct: 893 KLKIKITHADGEKCERCWKYD-ELGTDSEHPTLCPRCTAVL 932


>gi|416839234|ref|ZP_11902628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|416847398|ref|ZP_11907120.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|323440965|gb|EGA98672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442282|gb|EGA99912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 917

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 194/322 (60%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAEKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y     Q  + GD                  K +     SD V          + ++  
Sbjct: 250 KYG----QYNVNGD------------------KYIIAEALSDAVAEALDWDKASIKLENE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   RQ  ++AI
Sbjct: 406 FRATPQWFASISKVRQDILEAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|414154546|ref|ZP_11410864.1| Isoleucine--tRNA ligase (fragment) [Desulfotomaculum hydrothermale
           Lam5 = DSM 18033]
 gi|411453943|emb|CCO08768.1| Isoleucine--tRNA ligase (fragment) [Desulfotomaculum hydrothermale
           Lam5 = DSM 18033]
          Length = 764

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW  PY TL P+YEA QI VFG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 140 FQRLGVRGDWQRPYYTLLPQYEATQIRVFGEMAKKGYIYKGLKPVYWCACCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E   D  + +WTTTPWT+PAN A+AV+ + +
Sbjct: 200 EYAD-KTSPSIYVKFPVKDG----RGILPE---DAAVVIWTTTPWTLPANVAIAVHPEFE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EAKWGTKLVIKKT 182
           Y +    +L+ G                       ++VA  L+    +A    +  I  T
Sbjct: 252 YVL----ALVNGHK---------------------VVVAKGLLDAFRQAVEAAEAAILDT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G  LE     HP   R   +VI G+++T E+GTG VHTAPGHG+ED+    +YGLP+L
Sbjct: 287 YKGEQLERVVCRHPFMERDS-LVILGEHVTLEAGTGAVHTAPGHGEEDFQVGKQYGLPVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D+ G+FT E GKF G  +L D N  +++ L E+  L+     +H+YP+ WR K+P  
Sbjct: 346 APLDNRGRFTAEGGKFEGQFIL-DANKTIIEELKEKNVLLGHGQIKHQYPHCWRCKQPIF 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASV+GFRQ A+ AI  V WVP
Sbjct: 405 FRATEQWFASVDGFRQKALQAIRNVNWVP 433



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 1/88 (1%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY  D+ + P +L+Q+++ YRK+R T R+LLGNL+D+  V + ++Y+ 
Sbjct: 618 GADILRLWVSSADYRSDLALSPNILKQIAEAYRKIRNTARFLLGNLYDYNPVQDEVAYEQ 677

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQF 425
           LP +D+ AL +L  ++  +  +YE+Y+F
Sbjct: 678 LPELDRVALLELHKLINQVLAAYENYEF 705


>gi|320033836|gb|EFW15782.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1012

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 199/342 (58%), Gaps = 39/342 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 145 MKGFREWGVMGDWENHWKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTGTALAE 204

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGLAVWTTTPWTVPANA 114
           AELEY + HVS +    F + + P      P  SG       ++   +WTTTPWT+PANA
Sbjct: 205 AELEYRDDHVSHAALVKFPLATMPTEIREHPLASG------DEIYAVIWTTTPWTLPANA 258

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           A+AV+  L Y +V  QS   G      +++    ++L++  KV + VA           G
Sbjct: 259 AIAVSKDLNYIIV--QSERHGKLLIAESRREYVEHLLEESLKVLMSVA-----------G 305

Query: 175 TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           T L+             R +    +  C  +I GD++T ESG+GLVH APGHG EDY   
Sbjct: 306 TSLLSS---------TYRPLFKDTDGSCQPIIAGDFVTDESGSGLVHCAPGHGMEDYEVC 356

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL+E+  L+ +  Y+H
Sbjct: 357 LEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKH 416

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 417 KYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 335 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 391
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T   +RR+ QT +      +  ++ P++P L E+ W++ P        SA +   
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTPDVIK----SAVDHPL 840

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
                  D KW    + + Y    I      V  + E AR  K +GSSL++ V+L   D+
Sbjct: 841 RRIMVPPDPKWGNLFLEKSY--PAIAAANAAVKMMQETARVKKQMGSSLQSYVHLNVPDS 898

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPY---SGEYLVEGK---- 624
              S  +E+ TA+     L   F++S V +      G    +P+   + E+  EG+    
Sbjct: 899 --VSVFQELGTAE-----LADFFVVSSVTL------GSGSEVPHEVENAEWSYEGQFELP 945

Query: 625 ----DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                K WI  +  EG KC RCW Y   V   +    LC RC +V+
Sbjct: 946 SGEMGKAWI-YTPVEG-KCARCWRY--LVPESMAEDALCQRCEDVV 987


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 208/332 (62%), Gaps = 32/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++++ L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIVDD-LNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
             YA+ +      GD                       IVA D++ T+  EA  G   ++
Sbjct: 256 FDYALAQF-----GDE--------------------IYIVAKDMLDTVKKEAHLGDYEIV 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                G DLE  + +HP+ +R   +VI G+++T E+GTG VHTAPGHG+ED++   +YGL
Sbjct: 291 -AVFKGKDLEGIKALHPIYDRDS-LVILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGL 348

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K 
Sbjct: 349 EVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAESHITHSYPHCWRCKS 407

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFASVEGFR+ A+ +I +V W P
Sbjct: 408 PIIFRATEQWFASVEGFRKEALKSIKEVNWYP 439



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/335 (36%), Positives = 201/335 (60%), Gaps = 24/335 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISKEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
             S  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 AASKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R +++K LE+AR+ K IG SLEA+V ++      + 
Sbjct: 793 PEVQEKYNNPYI--IEKWEKLFDIRKDISKALEIARSDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E     +D   L+ +FI+S+V VL      + ++   S +Y ++      I V+ A 
Sbjct: 846 ELYEFFKRFND---LEYVFIVSKV-VLHQPEETVPQDAYKSEDYDLK------IIVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
           G KCERCW YS  VG+  EHPT+C+RC   +  QP
Sbjct: 896 GEKCERCWMYSDTVGTIKEHPTICARCASHIEHQP 930


>gi|303310449|ref|XP_003065237.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240104897|gb|EER23092.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1012

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 199/342 (58%), Gaps = 39/342 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 145 MKGFREWGVMGDWENHWKTMDKEFEMRQLEVFLEMVDKGLIYRRYKPVYWSPSTGTALAE 204

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGLAVWTTTPWTVPANA 114
           AELEY + HVS +    F + + P      P  SG       ++   +WTTTPWT+PANA
Sbjct: 205 AELEYRDDHVSHAALVKFPLATMPTEIREHPLASG------DEIYAVIWTTTPWTLPANA 258

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           A+AV+  L Y +V  QS   G      +++    ++L++  KV + VA           G
Sbjct: 259 AIAVSKDLNYIIV--QSERHGKLLIAESRREYVEHLLEESLKVLMSVA-----------G 305

Query: 175 TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           T L+             R +    +  C  +I GD++T ESG+GLVH APGHG EDY   
Sbjct: 306 TSLLSS---------TYRPLFKDTDGSCQPIIAGDFVTDESGSGLVHCAPGHGMEDYEVC 356

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL+E+  L+ +  Y+H
Sbjct: 357 LEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYLEEEGRLLHKHKYKH 416

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 417 KYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 335 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 391
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY   T   +RR+ QT +      +  ++ P++P L E+ W++ P        SA +   
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTPDVIK----SAVDHPL 840

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
                  D KW    + + Y    I      V  + E AR  K +GSSL++ V+L   D+
Sbjct: 841 RRIMVPPDPKWGNLFLEKSY--PAIAAANAAVKMMQETARVKKQMGSSLQSYVHLNVPDS 898

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPY---SGEYLVEGK---- 624
              S  +E+ TA+     L   F++S V +      G    +P+   + E+  EG+    
Sbjct: 899 --VSVFQELGTAE-----LADFFVVSSVTL------GSGSEVPHEVENAEWSYEGQFELP 945

Query: 625 ----DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                K WI  +  EG KC RCW Y   V   +    LC RC +V+
Sbjct: 946 SGEMGKAWI-YTPVEG-KCARCWRY--LVPESMAEDALCQRCEDVV 987


>gi|386725928|ref|YP_006192254.1| protein IleS [Paenibacillus mucilaginosus K02]
 gi|384093053|gb|AFH64489.1| IleS [Paenibacillus mucilaginosus K02]
          Length = 922

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 189/328 (57%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DWNNPY+TL P+YEA QI +FG M  +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGIRGDWNNPYITLQPKYEAQQIRLFGGMVNKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G L +   D  + +WTTTPWT+PAN  ++++    
Sbjct: 200 EYKD-KTSSSIYVAFDVADG----KGKLPQ---DAAIVIWTTTPWTLPANLGISLHPDFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  VE                           + F++    L    +    T + +  T 
Sbjct: 252 YVTVETGG------------------------RKFVLAQGLLEAAAKEIGWTDVKVLATH 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+LE     HP  +R   +V+ G+++T E+GTG VHTAPGHG++D+V   +Y L +L 
Sbjct: 288 KGSELELVLCKHPFYDRTS-LVMTGEHVTLEAGTGCVHTAPGHGEDDFVIGQRYNLGVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G  T EA  F GL      + AV++ L E   L+ +   +H+YP+DWRTKKP IF
Sbjct: 347 PVDDQGHMTSEAPGFEGL-FYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++ FR   +D I ++ W P
Sbjct: 406 RATEQWFASIDKFRSEMLDEIKKINWTP 433



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/343 (37%), Positives = 188/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWVSS DY  DV I   +L Q S+ YRK+R TLR+LLGNL D+   
Sbjct: 606 PNQVCNKLGADILRLWVSSTDYQSDVRISDNILNQTSEGYRKIRNTLRFLLGNLSDFSPA 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +S  ++  +D+YA+ +L  +++ +  +YE+Y+F  ++Q +  F  V++S FY D+ K
Sbjct: 666 ADRVSVREMSELDRYAMLRLNRLIERVVAAYENYEFHVVYQAVHHFCAVEMSAFYLDILK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY        RR+ QTVL   L  I ++IAPILPH +++VW+ +P A    D  + + 
Sbjct: 726 DRLYASLPQDPARRAAQTVLYEALTVITKLIAPILPHTSDEVWKYIPGA----DLPSVQL 781

Query: 510 VF--ESKWPVLDE----KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
            +  E+   + DE    KW  F +           +R +V K LE AR  KLIG+SL A 
Sbjct: 782 AYMPEADASLFDEALERKWEQFGI-----------IRDDVLKALEEARKEKLIGNSLSAA 830

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           V+L+   A +AS L          + L  +FI+S V V P             G +  +G
Sbjct: 831 VHLYP-SAEVASFLGGF-------ERLDLLFIVSAVVVHPEGAAAP------EGAHAFKG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              + + V+ AEG KCERCW  + +VG   EHPTLC RC  V+
Sbjct: 877 ---LSVQVASAEGEKCERCWIVTPEVGHSEEHPTLCQRCAGVI 916


>gi|239636330|ref|ZP_04677332.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
 gi|239597685|gb|EEQ80180.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
          Length = 916

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 196/329 (59%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G++++   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA +W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAQALAETVAEALEWDQDTIQLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY LP
Sbjct: 286 KEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G F G+      N AV   L E+ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI   ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEDTQF 432



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 204/376 (54%), Gaps = 42/376 (11%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI 530
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF     
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF----- 801

Query: 531 YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTL 590
                 + LR +VN+ LE AR  K+IG SLEAKV + ++    A+   +        D L
Sbjct: 802 ------MNLRDDVNRALEAARNEKVIGKSLEAKVVIGSNQDFNATEFLQQF------DDL 849

Query: 591 QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVG 650
           Q++FI SQ EV+    NG+       G+          I +  AEG KCERCWNYS Q+G
Sbjct: 850 QQLFITSQAEVVDQVDNGVSYQ---HGD----------IRIEHAEGEKCERCWNYSDQLG 896

Query: 651 SFVEHPTLCSRCYEVL 666
           S  E   LC RC EV+
Sbjct: 897 SVGELDHLCPRCQEVV 912


>gi|445059887|ref|YP_007385291.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
 gi|443425944|gb|AGC90847.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
          Length = 916

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 196/329 (59%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G++++   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA +W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAQALAETVAEALEWDQDTIQLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY LP
Sbjct: 286 KEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G F G+      N AV   L E+ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTEKDALLKLNFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI   ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEDTQF 432



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 204/376 (54%), Gaps = 42/376 (11%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI 530
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF     
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF----- 801

Query: 531 YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTL 590
                 + LR +VN+ LE AR  K+IG SLEAKV + ++    A+   +        D L
Sbjct: 802 ------MNLRDDVNRALEAARNEKVIGKSLEAKVVIGSNQDFNATEFLQQF------DDL 849

Query: 591 QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVG 650
           Q++FI SQ EV+    NG+       G+          I +  AEG KCERCWNYS Q+G
Sbjct: 850 QQLFITSQAEVVDQVDNGVSYQ---HGD----------IRIEHAEGEKCERCWNYSDQLG 896

Query: 651 SFVEHPTLCSRCYEVL 666
           S  E   LC RC EV+
Sbjct: 897 SVGELDHLCPRCQEVV 912


>gi|337748288|ref|YP_004642450.1| protein IleS [Paenibacillus mucilaginosus KNP414]
 gi|336299477|gb|AEI42580.1| IleS [Paenibacillus mucilaginosus KNP414]
          Length = 922

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 189/328 (57%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DWNNPY+TL P+YEA QI +FG M  +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FKRLGIRGDWNNPYITLQPKYEAQQIRLFGGMVNKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G L +   D  + +WTTTPWT+PAN  ++++    
Sbjct: 200 EYKD-KTSSSIYVAFDVADG----KGKLPQ---DAAIVIWTTTPWTLPANLGISLHPDFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  VE                           + F++    L    +    T + +  T 
Sbjct: 252 YVTVETGG------------------------RKFVLAQGLLEAAAKEIGWTDVKVLATH 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+LE     HP  +R   +V+ G+++T E+GTG VHTAPGHG++D+V   +Y L +L 
Sbjct: 288 KGSELELVLCKHPFYDRTS-LVMTGEHVTLEAGTGCVHTAPGHGEDDFVIGQRYNLGVLC 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G  T EA  F GL      + AV++ L E   L+ +   +H+YP+DWRTKKP IF
Sbjct: 347 PVDDQGHMTSEAPGFEGL-FYDKASKAVIEKLQESAHLLHQATIQHQYPHDWRTKKPVIF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++ FR   +D I ++ W P
Sbjct: 406 RATEQWFASIDKFRSEMLDEIKKINWTP 433



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/343 (37%), Positives = 188/343 (54%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q     GAD+LRLWVSS DY  DV I   +L Q S+ YRK+R TLR+LLGNL D+   
Sbjct: 606 PNQVCNKLGADILRLWVSSTDYQSDVRISDNILNQTSEGYRKIRNTLRFLLGNLSDFSPA 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +S  ++  +D+YA+ +L  +++ +  +YE+Y+F  ++Q +  F  V++S FY D+ K
Sbjct: 666 ADRVSVREMSELDRYAMLRLNRLIERVVAAYENYEFHVVYQAVHHFCAVEMSAFYLDILK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY        RR+ QTVL   L  I ++IAPILPH +++VW+ +P A    D  + + 
Sbjct: 726 DRLYASLPQDPARRAAQTVLYEALTVITKLIAPILPHTSDEVWKYIPGA----DLPSVQL 781

Query: 510 VF--ESKWPVLDE----KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
            +  E+   + DE    KW  F +           +R +V K LE AR  KLIG+SL A 
Sbjct: 782 AYMPEADASLFDEALERKWEQFGL-----------IRDDVLKALEEARKEKLIGNSLSAA 830

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           V+L+   A +AS L          + L  +FI+S V V P             G +  +G
Sbjct: 831 VHLYP-SAEVASFLGGF-------ERLDLLFIVSAVVVHPEGAAAP------EGAHAFKG 876

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              + + V+ AEG KCERCW  + +VG   EHPTLC RC  V+
Sbjct: 877 ---LSVQVASAEGEKCERCWIVTPEVGHSEEHPTLCQRCAGVI 916


>gi|449496224|ref|XP_004175169.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
           mitochondrial [Taeniopygia guttata]
          Length = 994

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 191/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADW N YLT DP+YEA Q+ VF +M  +G IYR  KPV WSPS++TALAEA
Sbjct: 175 SAFIRWGVMADWANCYLTFDPKYEANQLRVFHKMYDKGLIYRDYKPVFWSPSTKTALAEA 234

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E HVSRS+Y  F ++ +PP  + +++   P   + VWTT PWT+PAN AV     
Sbjct: 235 ELEYNEQHVSRSVYMKFPLLKSPPKLTAVIDGSSP-ASVLVWTTQPWTLPANQAVCYMPD 293

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y++V+  +  +                         I+A+D V +  A   T+  +  
Sbjct: 294 SAYSIVKCATTGQ-----------------------HFILAADRVESTAAVLDTQFEVVS 330

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+DL +    HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP 
Sbjct: 331 TCKGADLADGSCAHPTIPGKVSPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASHHQLPT 390

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG +    +VL +GN AV+K L    SL+ EE Y H YPYDWRTKKP
Sbjct: 391 DCLVDECGYFTEAAGSELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKP 450

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA++QWF +    + AA D + +VK +P
Sbjct: 451 IIIRASKQWFVNTADVKAAAQDVLKKVKVIP 481



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 170/343 (49%), Gaps = 32/343 (9%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +VMIGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 667 PPYGADVLRWWVAESNVFTEVMIGPVVLNAARDDINKLRNTLRFMLGNVDGFNPETDSIP 726

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             ++ ++DQY L  L      + E+Y+ Y++ K+ +++Q F    LSNFYF V KDRLY 
Sbjct: 727 PAEMHIVDQYMLHLLHEYGSKVTEAYKQYEYSKVVRLLQAFCSRSLSNFYFSVIKDRLYC 786

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q +P+         +E VF + 
Sbjct: 787 EEAKDPKRRSCQTVLAEALDIVVRSFAPILPHLAEEVFQYIPYK------KDSEGVFRTG 840

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+   + E       +E    V      + +GK   +SLE +V +   +  L 
Sbjct: 841 WINASSAWKKPGIEE------AIEGACAVRDSFLGSISGK---NSLEYEVIIVI-EPGLL 890

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
             L E   A+  +    L  I + SQ  +L   P     +     G +L+  EG D    
Sbjct: 891 FELMEALQAEETSSVSQLNEIMMASQTTLLSELPKETPSDANIIKGTFLINLEGGDICEQ 950

Query: 626 KVWIGVSRA-EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             +  ++R    +KC RC  Y+ +  S     T C RC +VLA
Sbjct: 951 SSYKVIARPIAKAKCPRCRRYTAESSS-----TPCPRCLQVLA 988


>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 933

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 199/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  +W+NPYLTLDP++EA Q+E+FG++  +GYI++G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGVLGNWDNPYLTLDPKFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N  
Sbjct: 204 EYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLNEN 256

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y +                 K+  GN         +I+A DL  +     G +   + 
Sbjct: 257 FDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENAELL 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G DLE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y LP
Sbjct: 292 KEFKGKDLEYATYQHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLP 350

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           ++SP+D  G  TEEAG  F GL V  + N A++K+L E   ++  +   H YP+DWR+K 
Sbjct: 351 VISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKT 409

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 410 PVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 207/332 (62%), Gaps = 26/332 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L+++ +++APIL   AE++W+NLP      +   AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWENLP-----AEAREAESVFLADWY 798

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLFTDDASLA 574
           V ++++    + E   W +I++LR EVNK LE AR G  K+IG+SL+AKV L+T+D +L 
Sbjct: 799 VNNDEYLNPELDEK--WQQIIKLRKEVNKKLEKARQGENKIIGNSLDAKVSLYTEDNALK 856

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             ++E      + + L+ +FI+S +EV  ++ +              E  + + I ++ A
Sbjct: 857 EFIKE------NLELLETVFIVSDIEVADTSDDNFT---------AAEEIENLKIKITHA 901

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +G KCERCW Y   +G+  EHPTLC RC  VL
Sbjct: 902 DGEKCERCWKYD-DLGTDPEHPTLCPRCTGVL 932


>gi|373497895|ref|ZP_09588411.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
 gi|371962417|gb|EHO80018.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
          Length = 933

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 220/395 (55%), Gaps = 51/395 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R G+  DW NPYLTL PEYEA Q+EVFG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FVRLGILGDWENPYLTLKPEYEAKQLEVFGELYENGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY   +  +      GL  E      + +WTTTPWT+PAN A+ +N + +
Sbjct: 201 EY-KNVSSPSIYVKMKANADLLERLGLTEEAW----VVIWTTTPWTLPANVAITLNPEFE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V                 K+  GN         +I+  DL      +    +  + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILGKDLAEKAFTEMDLEQFELIKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE   Y HP  +R   ++I G ++T ++GTG VHTAPGHGQ+DYV  ++YGLP++
Sbjct: 291 FQGKDLERTTYQHPFLDR-TGLIILGTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++++G  TEEAG+F+GL      N A+  +L++   L+  +  EH YP+DWR++ P I
Sbjct: 350 SPINNKGVLTEEAGEFAGL-FYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVI 408

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRATEQWF +VEG   R+ A+ A+  V+++P           +  P +     R+W    
Sbjct: 409 FRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPI 468

Query: 347 -VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 380
            V   + TG  +   ++L ++  I +K  GT  +L
Sbjct: 469 PVFFNEATGKEIFNKEILARIVGIVKK-EGTAAWL 502



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 210/340 (61%), Gaps = 25/340 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPSDVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + + Y+ L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYEQLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLYT GT S  RR+ QTV++  L+++ ++I PIL   +E++W+ LP    L+D   +E
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMITPILSFTSEEIWETLP--EVLKD---SE 787

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYL 566
            V  + W   ++++    +     W +I+++R E NK+LE AR G  ++IG+SL+AKV L
Sbjct: 788 SVLLTDWYEENDQYLNPEIENK--WIEIIKVRKEANKILEKARQGENRIIGNSLDAKVIL 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            + DA +   L E      + + L+   I+S+VE+  +  +  ++     GE   E +D 
Sbjct: 846 HSTDAEIQKFLVE------NREKLELALIVSEVEIAENADDSFVK-----GE---EAQD- 890

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++I V  A+G KCERCW YST++G   EHPTLC RC  VL
Sbjct: 891 LYIKVLHADGEKCERCWKYSTELGKDSEHPTLCPRCASVL 930


>gi|347534665|ref|YP_004841335.1| Isoleucyl-tRNA synthetase [Lactobacillus sanfranciscensis TMW
           1.1304]
 gi|345504721|gb|AEN99403.1| Isoleucyl-tRNA synthetase [Lactobacillus sanfranciscensis TMW
           1.1304]
          Length = 956

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 203/330 (61%), Gaps = 33/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW+NPYLTL PE+EAA++ VFG+M+ +G IY+G KPV WS SS +ALAEAE+
Sbjct: 162 FKRLGLQGDWDNPYLTLMPEFEAAEVRVFGKMAEKGLIYKGLKPVIWSWSSESALAEAEV 221

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + +A  ++V       G+L+    D  + VWTTTPWT+PA+  + ++A   
Sbjct: 222 EYHDVESPSAFFAE-KVVDG----KGVLD--TDDTYMVVWTTTPWTIPASEGITISADFD 274

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           YAVV+                        D KK   ++ ++L+      +G K V + KT
Sbjct: 275 YAVVQHDD---------------------DPKKY--VLDTELLDKDAEMFGWKNVKVLKT 311

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP D+ +  V + GD++T ++GTGLVHTAPG+G++DY+   +YGLPI 
Sbjct: 312 VKGAELENVLAEHPFDSSKKLVTMLGDFVTNDAGTGLVHTAPGYGEDDYIIGKQYGLPIF 371

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVD++G  T+EAG  F+G+    D N   +  L EQ  L+   PY+H YP+DWRTKKP 
Sbjct: 372 APVDNKGYLTKEAGPDFAGV-FYEDANQIALDKLKEQGQLVYYMPYKHSYPFDWRTKKPV 430

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFASV   RQ  +DAI  V + P
Sbjct: 431 IYRATPQWFASVSKIRQNILDAIDTVNFNP 460



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 36/343 (10%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + P+E     GAD++RLWV+SVD + DV +     + + D Y+K+R T+RYLL N  D+ 
Sbjct: 630 IAPEEVIKQMGADIIRLWVTSVDTSADVRVSMGNFKTVGDSYKKIRNTVRYLLANTSDFD 689

Query: 389 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              +SISYD+L  +DQY L +L ++++N+++SY++Y F  I + I  F+  +LS FY D 
Sbjct: 690 PEKDSISYDELTSVDQYMLVKLNHLIENVKKSYDNYDFMAINKEIMTFLTANLSAFYLDF 749

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
           AKD LY        RR  QTV+   L+++ +++ PILPH  E++W  L            
Sbjct: 750 AKDILYIDAENDKRRRGMQTVMYEALVALTKLLTPILPHTTEEIWGFLQ--------EPE 801

Query: 508 EFVFESKWP----VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
           EFV  S+ P      +EK  T        W   L  R +V K +E AR  K+IG   EAK
Sbjct: 802 EFVQLSEMPEPKHFANEKEVTAE------WNNFLNFRKDVLKAMEDARNDKVIGKPSEAK 855

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           + L+ D+ +      +   A  + D  Q I ++S++E         I++I  + + +   
Sbjct: 856 LILYVDEDT------KKALADLNVDVAQ-ILMVSELE---------IKSIEDAEDDVTTF 899

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            DK  I V  A+G  CERC    T VGS  ++P  C+RC +++
Sbjct: 900 GDKFAIEVQHADGKVCERCRLIKTDVGSDADYPEFCARCAKIV 942


>gi|340355067|ref|ZP_08677760.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
 gi|339622748|gb|EGQ27262.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
          Length = 919

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 199/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL PE+E+ QI+VFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGVRGDWENPYITLKPEFESRQIQVFGEMAKKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E   D+   +WTTTPWT+PAN  ++V+    
Sbjct: 199 EYKDKK-SPSIYVSFPVRDG----KGVLAE---DVKFLIWTTTPWTIPANLGISVHPAFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           YAVV +     G+                      ++VA +LV  L  E +W     I++
Sbjct: 251 YAVVNVN----GEK---------------------LVVAKELVEFLAKELEW-ENYSIEQ 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L G+DL+     HP  +R   +++ G+++T ++GTG VHTAPGHG++D+  S  YG+  
Sbjct: 285 ELPGADLDRIVAKHPFYDRDSLIML-GEHVTADAGTGCVHTAPGHGEDDFYVSKSYGIDA 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP++D G  TEEA  F+G+    D N AV + L+E  +L       H YP+DWRTKKP 
Sbjct: 344 LSPINDRGVMTEEAPYFAGM-FYEDANKAVTEKLEEVGALKKLSFITHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FR   ++AI   K+ P
Sbjct: 403 IFRATAQWFASIELFRSDLLEAIRNTKFTP 432



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 189/345 (54%), Gaps = 41/345 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GAD++RLWVSSVDYT DV +     +Q+S++YRK+R T+R+L GN+ D+  
Sbjct: 603 VPAKVINQLGADIVRLWVSSVDYTADVRVSDSNFKQVSEVYRKIRNTIRFLHGNVADFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +S++++  +DQY   +L++++K +R +Y+ Y+F  ++  +  F    LS+FY D+A
Sbjct: 663 SADRVSFEEMRPVDQYVYVKLQDLIKEVRTAYDHYEFAGVYHAVNNFCTGVLSSFYLDIA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y  G     RR+ QTV+   L+++V++I PILPH A+++W  L       +   A+
Sbjct: 723 KDVVYIEGVNHPHRRAMQTVMYDTLITLVKLITPILPHTADEMWNYL-------NVKEAD 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIY-----FWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
            V  +  P  DEK      GE+       +  ++ +R +V K LE AR  K+IG SLEAK
Sbjct: 776 SVQLTDMPEADEK------GEVADKLRERFDHLMAIRDDVLKALEEARNAKVIGKSLEAK 829

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST--PNGLIRNIPYSGEYLV 621
           V +      L    + +  A  D D  Q  FI+S  E   +T  PN L            
Sbjct: 830 VTVV-----LPEDQQGLLQAS-DIDFAQ-FFIVSTFEESKNTELPNAL------------ 870

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              D+  + V  AEG KCERCW  ST VG    HP LC+RC  V+
Sbjct: 871 -KLDRATVLVEPAEGEKCERCWTISTTVGEDTTHPALCARCASVV 914


>gi|404367837|ref|ZP_10973199.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688929|gb|EFS25764.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 933

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 220/395 (55%), Gaps = 51/395 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R G+  DW NPYLTL PEYEA Q+EVFG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FVRLGILGDWENPYLTLKPEYEAKQLEVFGELYENGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY   +  +      GL  E      + +WTTTPWT+PAN A+ +N + +
Sbjct: 201 EY-KNVSSPSIYVKMKANADLLERLGLTEEAW----VVIWTTTPWTLPANVAITLNPEFE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V                 K+  GN         +I+  DL      +    +  + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILGKDLAEKAFTEMDLEQFELIKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE   Y HP  +R   ++I G ++T ++GTG VHTAPGHGQ+DYV  ++YGLP++
Sbjct: 291 FQGKDLERTTYQHPFLDR-TGLIILGTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++++G  TEEAG+F+GL      N A+  +L++   L+  +  EH YP+DWR++ P I
Sbjct: 350 SPINNKGVLTEEAGEFAGL-FYAQANKAICAHLEKSGHLMKLKMIEHSYPHDWRSRTPVI 408

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           FRATEQWF +VEG   R+ A+ A+  V+++P           +  P +     R+W    
Sbjct: 409 FRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPI 468

Query: 347 -VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 380
            V   + TG  +   ++L ++  I +K  GT  +L
Sbjct: 469 PVFFNEATGKEIFNKEILARIVGIVKK-EGTAAWL 502



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 210/340 (61%), Gaps = 25/340 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPSDVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + + Y+ L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYEQLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLYT GT S  RR+ QTV++  L+++ ++I PIL   +E++W+ LP    L+D   +E
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMITPILSFTSEEIWETLP--EVLKD---SE 787

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYL 566
            V  + W   ++++    +     W +I+++R E NK+LE AR G  ++IG+SL+AKV L
Sbjct: 788 SVLLTDWYEENDQYLNPEIENK--WIEIIKVRKEANKILEKARQGENRIIGNSLDAKVIL 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            + DA +   L E      + + L+   I+S+VE+  +  +  ++     GE   E +D 
Sbjct: 846 HSTDAEIQKFLVE------NREKLELALIVSEVEIAENADDTFVK-----GE---EAQD- 890

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++I V  A+G KCERCW YST++G   EHPTLC RC  VL
Sbjct: 891 LYIKVLHADGEKCERCWKYSTELGKDSEHPTLCPRCASVL 930


>gi|340758052|ref|ZP_08694644.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 933

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 198/331 (59%), Gaps = 35/331 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R G+  DW NPYLTL+PEYEA Q+EVFG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FVRLGILGDWENPYLTLNPEYEAKQLEVFGELYENGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY   +  +      GL  E      + +WTTTPWT+PAN A+++N   +
Sbjct: 201 EY-KNVSSPSIYVRMKANADLLERLGLTEEAW----VVIWTTTPWTLPANVAISLNPDFE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V                 K+  GN         +I+  DL      +    +  + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILGKDLAEKAFTEMDLEQFELIKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE   Y HP   R   +++ G ++T ++GTG VHTAPGHGQ+DYV  ++YGLP++
Sbjct: 291 FQGKDLERATYQHPFLERTGMIIL-GTHVTADAGTGCVHTAPGHGQDDYVVGVRYGLPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++++G  TEEAG+F+GL  +   N A+  +L++   L+  +  EH YP+DWR+K P I
Sbjct: 350 SPINNKGVLTEEAGEFAGLFYV-QANKAICAHLEKTGHLMKLKMIEHSYPHDWRSKTPVI 408

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           FRATEQWF +VEG   R+ A+ A+  V+++P
Sbjct: 409 FRATEQWFVNVEGSDIREKALKALDNVEFIP 439



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 212/340 (62%), Gaps = 25/340 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPADVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + + YD L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYDKLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLYT GT S  RR+ QTV++  L+++ ++IAPIL   +E++W+ LP    L+D   +E
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMIAPILSFTSEEIWETLP--EVLKD---SE 787

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYL 566
            V  + W   ++++    +     W +I+++R EVNK+LE AR G  ++IG+SL+AKV L
Sbjct: 788 SVLLTDWYEENDQYLNPEIENK--WVEIIKVRKEVNKILEKARQGENRIIGNSLDAKVIL 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
            + +A +   L E      + + L+   I+S+VEV  +  +  +     +GE   E +D 
Sbjct: 846 HSTNAEVQKFLIE------NREKLELALIVSEVEVAENKDDTFV-----NGE---EAQD- 890

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++I V  A+G KCERCW YST++G   E+PTLC RC  VL
Sbjct: 891 IYIKVLHADGEKCERCWKYSTEIGKDSEYPTLCPRCASVL 930


>gi|390339216|ref|XP_784868.3| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like
           [Strongylocentrotus purpuratus]
          Length = 980

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 192/335 (57%), Gaps = 31/335 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M +FKR+G+ ADW+N Y T D EYEA+Q+++F  M  +G+IYR  KPV+WSPSSRTALAE
Sbjct: 167 MTAFKRWGIMADWDNCYYTFDKEYEASQLQLFHDMYQKGFIYRDVKPVNWSPSSRTALAE 226

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY   H+S +IY  F  + AP   S LL + L    +  + +WTTTPWT+PAN AV 
Sbjct: 227 AELEYNPHHISPAIYVKFS-IHAP---STLLADALGNTDNAAVVIWTTTPWTIPANQAVC 282

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
             A   Y ++E +                      D +   +I+ASD V  L+  WG  L
Sbjct: 283 YMADKDYCLLECKG--------------------TDDR---LIIASDRVADLKEVWGRDL 319

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I  T +G  LE C   HP+D      ++  +++    GTGL+HTAP HG EDY  ++++
Sbjct: 320 RIITTFSGRCLEGCSLYHPLDPCHHVPLLAANHVKMGLGTGLIHTAPAHGAEDYGVAIQH 379

Query: 238 GLPILSPVDDEGKFTEE-AGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
            L +   VD EG +T++   +  G +VL D N  V+  L    +L+ +E YEH YPYDWR
Sbjct: 380 NLKVTCQVDSEGFYTDDLREELRGKNVLLDANQTVIDMLASSKNLLHQEDYEHSYPYDWR 439

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TKKP I RA++QWF +    R  A + + ++   P
Sbjct: 440 TKKPIIIRASKQWFINTASLRDTASECLDEIDMRP 474



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 16/239 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++ P YGADVLR  ++  D+ G + +GP +    +    KLR T RY LGNL D++    
Sbjct: 656 KKEPAYGADVLRWRMADSDWMGRINVGPDLFAMTNQNIIKLRNTFRYFLGNLSDFKPSEG 715

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            + +  P+ D+Y L  L     ++  +YE Y+F ++ +     +   +S+FY +  KDRL
Sbjct: 716 -AVETTPL-DRYMLHLLHEYSDHVTRAYEDYEFSEVTRSAMDLVHNKISSFYLETVKDRL 773

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y     S  RRSCQTVL   L  I R +API+PHLAE+V  +L ++   E    A  VF+
Sbjct: 774 YCERGDSEKRRSCQTVLHHMLEVISRSLAPIVPHLAEEV--HLHYSKQQE---GAGSVFK 828

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           S W   D +W    +     W  +  LR   +  ++  +       S E  V ++T DA
Sbjct: 829 SGWMTPDPEWYQPHLANQ--WDALTVLRETYHSAIQAPK-------SREYDVSIYTQDA 878


>gi|326915110|ref|XP_003203864.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 930

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 191/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F R+G+ ADW N Y T DP+YEA Q+ VF +M  +G+IY+  KPV WSPS++TALAEA
Sbjct: 112 AAFIRWGIMADWANCYCTFDPKYEANQLRVFHKMYDKGFIYQDYKPVFWSPSAKTALAEA 171

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E HVSRS+Y  F ++ +PP  + +++   P   + VWTT PWTVPAN AV     
Sbjct: 172 ELEYNEQHVSRSVYMKFPLLKSPPKLASVIDGSSP-TSVLVWTTQPWTVPANQAVCYMPD 230

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y+VV+  +  E                        +I+A++ V +  A   T+  +  
Sbjct: 231 AEYSVVKCATTGE-----------------------HLILAANRVESTAAVLDTQFEVIS 267

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DL +    HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP 
Sbjct: 268 TCKGEDLADGSCAHPTIPGRVSPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHHQLPT 327

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG +    +VL +GN AV+K L    SL+ EE Y H YPYDWRTKKP
Sbjct: 328 ECLVDERGHFTEAAGPELKNKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKP 387

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA++QWF +    +  A + + +VK +P
Sbjct: 388 MIIRASKQWFVNTANVKATAQEVLKKVKIIP 418



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 171/344 (49%), Gaps = 34/344 (9%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 604 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIP 663

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 664 PSEMYIVDQYMLHLLQDYGSKVTEAYKQYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYC 723

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LP+         +E VF + 
Sbjct: 724 EEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLPYK------KDSEGVFRTG 777

Query: 515 WPVLDEKWRTFPVGEIY---------FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W      W+   + E           F G I        +V+ V   G L+   +EA   
Sbjct: 778 WINASSGWKKPGIEEAIEGACAMRDSFLGSISGKNPLEYEVIIVIEPG-LLFELMEA--- 833

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN--IPYSGEYLVEG 623
           L  +++S  S+L E+  A       Q   +    +  P+  N +  N  I   G  + E 
Sbjct: 834 LQAEESSRVSQLNEIMMAS------QTTLLSEIPKETPADANIVTGNFLINLEGGDIREE 887

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                I +  A+ +KC RC  Y+    S     T C RC +V+A
Sbjct: 888 SSYKVIALPTAK-AKCPRCRRYTADSSS-----TPCPRCLKVIA 925


>gi|227891035|ref|ZP_04008840.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867124|gb|EEJ74545.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 948

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 155 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 214

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L+E   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 215 VEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWTTTPWTIPASEGITIDATF 266

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 267 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 303

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 304 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 363

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 364 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 422

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 423 IIFRATPQWFASVDKIRDQILGAINEVQFFP 453



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 624 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 683

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 684 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 743

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 744 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEEYAQ 798

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 799 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 851

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 852 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 891

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  + PTLC+ C E++
Sbjct: 892 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLPTLCASCAEIV 935


>gi|293366842|ref|ZP_06613518.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319143|gb|EFE59513.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 916

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFIEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 210/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/335 (42%), Positives = 197/335 (58%), Gaps = 36/335 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW++PY+TLDP +EA QI VFG M+ +GYIY+GKK V+W P   TALAEAE
Sbjct: 144 DFKRLGVLGDWDHPYVTLDPHFEAEQIRVFGTMANKGYIYKGKKTVYWCPHCETALAEAE 203

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVWTTTPWTVPANAAVAVNA 120
           +EY +   + +I+    +V      +GL  E        + +WTTTPWT+PAN AVA+N 
Sbjct: 204 IEYAD-QKTPTIFVKMPLVK----DNGLTPEAAQGKKAYMVIWTTTPWTIPANVAVALNP 258

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VI 179
              YA VE                   G VL        I+A+D+V  +  + G +   +
Sbjct: 259 DFDYAWVEYN-----------------GEVL--------IMAADMVDKVAQECGVEFGPV 293

Query: 180 KKTLAGSDLE--NCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
             T+ G   E   C +  P  N +  +V+  DY+  E+G+G VHTAPGHG  DY+T LKY
Sbjct: 294 LGTIKGRAFEYAECEHPFPEYNHRKSLVVLADYVDKEAGSGCVHTAPGHGDVDYLTGLKY 353

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            LPIL PVD +G FTEEAG+      + D N  V+K+L EQ +++ ++   H+Y + WR 
Sbjct: 354 NLPILCPVDQKGCFTEEAGELFQGKFVFDSNGLVIKHLAEQNAILGKKTIHHQYAHCWRC 413

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQ-VKWVP 331
           K P IFRA+EQWFASV+GFR  A+ AI + V+W+P
Sbjct: 414 KNPIIFRASEQWFASVDGFRDDALKAIAEDVQWIP 448



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/338 (37%), Positives = 188/338 (55%), Gaps = 25/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP +    YGAD++RLW +S DY  DV I P +L+Q+++ YRK+R T+RY+LGN HD+  
Sbjct: 620 VPQEVIDQYGADIVRLWAASSDYKQDVRISPVILKQLAEAYRKVRNTIRYILGNTHDFDY 679

Query: 390 -GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
               +++ ++  +DQ+AL + E + K++ E+YE+Y F  +F  I  F  VD+S+FY D+ 
Sbjct: 680 ETQKVAFAEMEELDQWALMRFEALKKDVTEAYETYDFHVLFHAIHDFCTVDMSSFYLDII 739

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLYT       RRS QT ++  L  ++ ++ P+L    E+V+Q     Y  +   A +
Sbjct: 740 KDRLYTSRKDGKARRSAQTAMTQILRELMVMLMPVLSFTMEEVYQ-----YMNKPADAPQ 794

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V    WP    ++    +     W   + +R E+ KVLE AR  K IG SL+AKV LF 
Sbjct: 795 SVQMLPWPQAHPEYVKEDLKAK--WDAFIAIRGEITKVLEGARRAKTIGHSLDAKVELFA 852

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
              +LA    E+   + D  TL    I+SQ EV     +        +GE    G+D + 
Sbjct: 853 TGDALA----ELKAVEKDLPTL---LIVSQAEVHEGLTD--------AGE--ATGRDDLK 895

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V  AEG KCERCW YS  VG   +HPTLC++C E +
Sbjct: 896 VLVEAAEGEKCERCWCYSKTVGQDPQHPTLCAKCCEAV 933


>gi|335357087|ref|ZP_08548957.1| isoleucyl-tRNA synthetase [Lactobacillus animalis KCTC 3501]
          Length = 931

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 198/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPY+TLDPEYEA QI VFG+M+    IY+GK+PV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYVTLDPEYEAQQIRVFGKMAENDLIYKGKRPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA  R++       G+L+E   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYAE-RVLDG----KGVLDE---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           YAVV+           PA ++ +             ++A+DL+      +G + V   K 
Sbjct: 251 YAVVQ-----------PAGEERK------------FVMAADLIQKNAELFGWEDVKTLKV 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE     HP    +  +V+ GD++TTESGTGLVHTAPG+G +DY   +KYGL I 
Sbjct: 288 VKGQDLEYITAQHPFYEDRELLVMLGDFVTTESGTGLVHTAPGYGDDDYKMGMKYGLEIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PV D G  T E G +F G+    D N   +  L E   L+ E  YEH YP+DWRTKKP 
Sbjct: 348 APVSDTGHLTAECGPEFDGV-FYEDANEVALNKLREANLLLKEMDYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   ++AI +V ++P
Sbjct: 407 IFRATPQWFASVDKIRDNILNAINEVNFLP 436



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 169/348 (48%), Gaps = 46/348 (13%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +  +   Q+S+ YRK R T+R+LL N  D+  
Sbjct: 607 VPEEVIKKMGAEIIRLWVLSVDTSADVRVSMESFAQISESYRKFRNTMRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I +D+L  IDQY L  +    K I + Y +Y F  I++ +  F+  +LS FY  VA
Sbjct: 667 AKDTIPFDELEAIDQYMLILVNKFTKEILDDYANYNFMDIYKKVINFVTTELSAFYLAVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYT-LEDGS 505
           KD +Y     +  RRS QTVL   ++ + +++ P++PH  E++W  +  P  Y  L +  
Sbjct: 727 KDVVYIEAKDAKKRRSMQTVLYETVVRLAKLMTPVMPHTTEEIWNFVKEPEEYVQLAEMP 786

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           A E  F+S+  +++             W + +++R+ V K LE AR  KLIG S EA V 
Sbjct: 787 AVEH-FDSEAQIMEN------------WTRFMKIRSHVLKSLEEARNQKLIGKSFEAHVT 833

Query: 566 LFTDD------ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
           L+  +      A+L + +RE               I+SQ          L          
Sbjct: 834 LYVSEGVKQELANLGADVREA-------------LIVSQ----------LDIADLADAPA 870

Query: 620 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             +   +V I V  A G  C RC   +  VG+      LC+ C +++A
Sbjct: 871 DADDYGEVKIKVEHAAGETCPRCRRITPDVGTDERFKELCASCAKIVA 918


>gi|194468388|ref|ZP_03074374.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453241|gb|EDX42139.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 950

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 204/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 156 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 215

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 216 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 267

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV+           PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 268 FDYSVVK-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 304

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G +LE     HP  +R   V +  DY+T ++GTGLVHTAPG+G EDY    KY LP
Sbjct: 305 DHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDEDYNFGKKYDLP 363

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G  F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 364 IFAPINDQGVLTKENGDGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 422

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 423 PIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  +            +FV  ++ P 
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM--------NEPEDFVQLTEIP- 804

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 805 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVXXYLTDDQKQL 861

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V P+         P   +   +G   V + V+ 
Sbjct: 862 LDSLNE---------NIQLLLGVSALHVHPAD------EAPADADQYNDG---VAVKVTT 903

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS   +P LC+RC  ++
Sbjct: 904 ANGETCARCRMVKEDVGSDPAYPELCARCAAIV 936


>gi|358468101|ref|ZP_09177738.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str.
           F0437]
 gi|357065527|gb|EHI75719.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str.
           F0437]
          Length = 933

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/391 (38%), Positives = 217/391 (55%), Gaps = 55/391 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI++G KPV+WSP + TALAEAE
Sbjct: 143 QFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIFKGLKPVYWSPVTETALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNA 120
           +EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N 
Sbjct: 203 IEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLNE 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
              Y +                 K+  GN         +I+A +L  +     G +   +
Sbjct: 256 NFDYGLY----------------KTEKGN---------LILAKELAESAFKDIGIENAEL 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   G +LE   Y HP   R   ++I GD++T ++GTG VHTAPGHGQEDYV  L Y L
Sbjct: 291 LKEFKGKELEYTTYQHPFLER-TGLIILGDHVTADAGTGAVHTAPGHGQEDYVVGLNYKL 349

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           P++SP+D  G  TEEAG  F GL V  + N A+VK+L E   ++  +   H YP+DWR+K
Sbjct: 350 PVVSPIDHRGCLTEEAGDLFKGL-VYSEANKAIVKHLTETGHILKMQEITHSYPHDWRSK 408

Query: 299 KPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW 346
            P IFRATEQWF  +EG   R+  +  I ++ ++P           +  P +     R+W
Sbjct: 409 TPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVW 468

Query: 347 VSSV-----DYTGDVMIGPQVLRQMSDIYRK 372
              +     D T + +   ++L ++ D+ R+
Sbjct: 469 GVPIPIFYNDETNEEIFHKEILDRLCDLVRE 499



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 207/332 (62%), Gaps = 26/332 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L+++ ++IAPIL   AE++W+NLP A T E    AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWENLP-AETRE----AESVFLADWY 798

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLFTDDASLA 574
           V ++++    + E   W +I++LR EVNK LE AR G  K+IG+SL+AKV L+T+D +L 
Sbjct: 799 VNNDEYLNPELDEK--WQQIIKLRKEVNKKLEKARQGENKIIGNSLDAKVSLYTEDNALK 856

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             ++E      + + L+ +FI+S +EV  S                 E  + + I ++ A
Sbjct: 857 EFIKE------NLELLETVFIVSDIEVADSCDENFT---------AAEEIENLKIKITHA 901

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +G KCERCW Y   +G+  EHPTLC RC  VL
Sbjct: 902 DGEKCERCWKYD-DLGTDPEHPTLCPRCTGVL 932


>gi|418613025|ref|ZP_13176046.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU117]
 gi|374817335|gb|EHR81520.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU117]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 212/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|70982524|ref|XP_746790.1| isoleucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66844414|gb|EAL84752.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159122969|gb|EDP48089.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 1009

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 199/341 (58%), Gaps = 35/341 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV ADW+  + T+D E+E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKGFRSFGVMADWDGHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS +    F +VS PP  +      L DL   +WTTTPWT+PANA +AV+ 
Sbjct: 207 AELEYKDDHVSTAALVRFPLVSVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANAVIAVHG 266

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VI 179
            L Y +V  QS   G                       +++A   +  LE      L VI
Sbjct: 267 SLDYMIV--QSDTHGQ----------------------LLIAQSRLEYLEHMLKEDLTVI 302

Query: 180 KKTLAGSDLENCRYVHPV----DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
             ++ GS+L +     P+    D    P +I  D++T +SG+GLVH APGHG +DY   +
Sbjct: 303 IPSIRGSELADQTKYRPLFKSADAEPQP-IIAADFVTADSGSGLVHCAPGHGMDDYEACV 361

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
             G+P  +PVDD G+FT++A      + SG  VLG+G VAV++Y++ Q  L+ +  YEHK
Sbjct: 362 PRGIPAFAPVDDHGRFTDKAMPSDPTRLSGKSVLGEGTVAVLEYIESQGYLLAKHEYEHK 421

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 422 YPYDWRSKLPIIIRATEQWFADVADIRDSAVKALEDVRFVP 462



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 19/333 (5%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R  + + Y  L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPYSQL 733

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D+ AL  L  +V   +++ E+++F+K    + R+  +  S FY +  KDRLYT G +
Sbjct: 734 QQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTYGES 793

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +  ++API P L E+ W++ P A  L+     + V  +  P +
Sbjct: 794 STSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTPEAIKLQCEHPLKRVAST--PPI 851

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDASLASRL 577
           D  W    +   Y   +I+ + + +  + E AR  K +GSSL++ V++   +  S  S L
Sbjct: 852 D--WLDQSLEADY--QEIVGVSSVIKALQEQARGKKQLGSSLQSFVHIVLPEGNSTESAL 907

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +   +  +D   +  + + +  E +P+    L     YS  Y +    K  + +   +  
Sbjct: 908 QRNLSELNDMFVVSSVTLGAHGEPVPAA--VLDAEWQYSDAYELPSGGKGTVYIYTPQAD 965

Query: 638 KCERCWNYSTQVGSFVEHP----TLCSRCYEVL 666
           KC RCW Y       V  P     +C+RC +V+
Sbjct: 966 KCPRCWRY------VVPEPHVDGRVCNRCEDVV 992


>gi|420214326|ref|ZP_14719605.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05005]
 gi|420216156|ref|ZP_14721378.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05001]
 gi|420219497|ref|ZP_14724513.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04008]
 gi|420231665|ref|ZP_14736310.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051668]
 gi|394283691|gb|EJE27856.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05005]
 gi|394288922|gb|EJE32819.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04008]
 gi|394292606|gb|EJE36348.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05001]
 gi|394302207|gb|EJE45655.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051668]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFIEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 210/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|417660093|ref|ZP_12309684.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|417909952|ref|ZP_12553685.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU037]
 gi|417910778|ref|ZP_12554494.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU105]
 gi|418603426|ref|ZP_13166811.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU041]
 gi|418622110|ref|ZP_13184866.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU123]
 gi|418629039|ref|ZP_13191555.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU127]
 gi|420182863|ref|ZP_14688996.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
 gi|420187601|ref|ZP_14693621.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
 gi|420194069|ref|ZP_14699898.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
 gi|420197085|ref|ZP_14702809.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
 gi|420226984|ref|ZP_14731757.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05003]
 gi|420229306|ref|ZP_14734012.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04003]
 gi|329734417|gb|EGG70730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|341652561|gb|EGS76349.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU037]
 gi|341654966|gb|EGS78702.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU105]
 gi|374407595|gb|EHQ78448.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU041]
 gi|374827485|gb|EHR91347.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU123]
 gi|374835033|gb|EHR98664.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU127]
 gi|394249326|gb|EJD94539.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM049]
 gi|394256043|gb|EJE00979.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM039]
 gi|394265892|gb|EJE10538.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM020]
 gi|394266767|gb|EJE11392.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM021]
 gi|394297485|gb|EJE41082.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH05003]
 gi|394299072|gb|EJE42623.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH04003]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFIEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|418616614|ref|ZP_13179538.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU120]
 gi|374820692|gb|EHR84768.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU120]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFIEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 143/363 (39%), Positives = 203/363 (55%), Gaps = 48/363 (13%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           ++G  +    ++G V  VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK
Sbjct: 589 MDGEDKKMSKSLGNV-IVPDQVVKQKGADIARLWVSSTDYLSDVRISDEILKQTSDVYRK 647

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R TLR++LGN++D+    +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q 
Sbjct: 648 IRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTASTINNYENFDYLNIYQE 707

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+ + +++APIL H AE+V
Sbjct: 708 VQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILIDMTKLLAPILVHTAEEV 767

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPVGEIYFWGKILELRTEVN 544
           W + P           E V  S  P V+D      EKW TF           + LR +VN
Sbjct: 768 WSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-----------MNLRDDVN 809

Query: 545 KVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHDADTLQRIFIISQVEVLP 603
           + LE AR  K+IG SLEAKV +  ++  + A  L++        + LQ++FI+SQVEV  
Sbjct: 810 RALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF-------NDLQQLFIVSQVEVKD 862

Query: 604 STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY 663
              +G+      S +Y   G     I +  AEG KCERCWNY+ ++GS  E   LC RC 
Sbjct: 863 KVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYTEELGSVGELEHLCPRCQ 909

Query: 664 EVL 666
           EV+
Sbjct: 910 EVV 912


>gi|418626701|ref|ZP_13189297.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU126]
 gi|374831245|gb|EHR94987.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU126]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/380 (38%), Positives = 210/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RL VSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLCVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|420222015|ref|ZP_14726940.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH08001]
 gi|420224877|ref|ZP_14729715.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH06004]
 gi|394290046|gb|EJE33916.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH08001]
 gi|394294280|gb|EJE37966.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH06004]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFIEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|418631944|ref|ZP_13194388.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU128]
 gi|418634018|ref|ZP_13196416.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU129]
 gi|420189634|ref|ZP_14695602.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
 gi|420192783|ref|ZP_14698640.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
 gi|420204115|ref|ZP_14709675.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
 gi|420234352|ref|ZP_14738916.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051475]
 gi|81819412|sp|Q5HPZ9.1|SYI_STAEQ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|374833613|gb|EHR97288.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU128]
 gi|374838010|gb|EHS01567.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU129]
 gi|394260599|gb|EJE05408.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM023]
 gi|394260969|gb|EJE05771.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM037]
 gi|394274129|gb|EJE18554.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM015]
 gi|394304314|gb|EJE47720.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIH051475]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|417788478|ref|ZP_12436161.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius NIAS840]
 gi|334308655|gb|EGL99641.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius NIAS840]
          Length = 931

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L+E   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWTTTPWTIPASEGITIDATF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 250 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 287 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 406 IIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEEYAQ 781

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 782 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 835 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  + PTLC+ C E++
Sbjct: 875 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLPTLCASCAEIV 918


>gi|90962017|ref|YP_535933.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391348|sp|Q1WTA9.1|SYI_LACS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|90821211|gb|ABD99850.1| Isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 931

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L+E   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWTTTPWTIPASEGITIDATF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 250 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 287 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 406 IIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEEYAQ 781

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 782 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 835 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  + PTLC+ C E++
Sbjct: 875 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLPTLCASCAEIV 918


>gi|420198979|ref|ZP_14704663.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
 gi|394272665|gb|EJE17115.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM031]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIENKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|416124403|ref|ZP_11595399.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
 gi|418329220|ref|ZP_12940299.1| isoleucine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
 gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
 gi|365230882|gb|EHM71957.1| isoleucine--tRNA ligase [Staphylococcus epidermidis 14.1.R1.SE]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|418613977|ref|ZP_13176967.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU118]
 gi|374821846|gb|EHR85887.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU118]
          Length = 916

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 208/380 (54%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  +++ + A  L+        
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNESFNTAEFLQHF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
             +GS  E   LC RC EV+
Sbjct: 893 EDLGSVGELEHLCPRCQEVV 912


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 197/333 (59%), Gaps = 37/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV   W+NPYLTL PE+EA QI VFG+M+  GYIY+G KP++WSPSS ++LAEA
Sbjct: 138 AEFKRLGVTGTWDNPYLTLQPEFEAEQIRVFGKMAENGYIYKGLKPIYWSPSSESSLAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F++        G++++   D    +WTTTPWT+PAN  + V+  
Sbjct: 198 EIEYKDVE-SPSIYVAFKVKDG----KGVVSD---DASFVIWTTTPWTLPANLGIFVHPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             YA V                        K +K  F +VA +LV +L    G + V + 
Sbjct: 250 YVYAEV------------------------KTEKGTF-VVAKELVNSLAETLGWESVEVV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G++LE     HP   R+  V++ GDY+T ++GTGLVH+APGHG++D+  S KY L 
Sbjct: 285 KEFRGNELEYATAWHPFYERESLVML-GDYVTLDAGTGLVHSAPGHGEDDFYYSRKYNLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +LSPVD++G +T EA  F G+      N  +   L +  SL+    + H YP+DWRTKKP
Sbjct: 344 VLSPVDNQGHYTAEAPGFEGM-FYAKANKVITDMLADNGSLLKLSYFVHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
            IFRAT QWFAS++ FRQ  +D I   VKW  P
Sbjct: 403 VIFRATPQWFASIDTFRQDILDVIENDVKWYHP 435



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 188/340 (55%), Gaps = 33/340 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +E    GAD++RLWVSSVDY  DV I  ++L Q+S+ YRK+R T+R++L N  D+   
Sbjct: 606 PAKEMQTKGADIIRLWVSSVDYESDVRISTEILNQISEAYRKIRNTMRFMLANTTDFEPS 665

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++++ DL  +DQY + +  ++VK I E+YE+Y+F  I+Q +  F  VDLS FY D AK
Sbjct: 666 KHAVAFKDLRSVDQYMMIRFNDVVKTIEEAYENYEFSTIYQTVMNFCTVDLSQFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP--FAYT-LEDGSA 506
           D +Y     ++ RR+ QTV+   L+ + ++++PIL H +E+VW+ L    AY  L D  A
Sbjct: 726 DVVYIEHEDNYQRRAMQTVIYDILVKLTKLLSPILVHTSEEVWKYLKEEEAYVQLADFPA 785

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            E  +E+K  VL +            W +  ++R    K LE AR  KLIG + EAKV L
Sbjct: 786 VE-NYENKEEVLAQ------------WAEFFKVRNTALKALEEARNEKLIGKNFEAKVTL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  +  + + L  + T       + ++FI+S++EV      G+    P +       K  
Sbjct: 833 YPSN-EVRALLDSLNT------NVAQLFIVSELEV---AAEGV--EAPANAVEGEGVKVV 880

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               V  A+G  CERC     +VG+  + PTLC RC  ++
Sbjct: 881 ----VEHAKGETCERCRAVKIEVGTLEDAPTLCHRCAAIV 916


>gi|312869509|ref|ZP_07729664.1| isoleucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094956|gb|EFQ53245.1| isoleucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 931

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 203/332 (61%), Gaps = 37/332 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEAE
Sbjct: 138 DFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWTTTPWTVPANAAVAVNAK 121
           +EY   H   +  A F    A     G  N+ L D   L VWTTTPWTVPA+ AVAVN K
Sbjct: 198 VEY---HDVVAKTAFF----AEQVKDG--NDILDDNTYLVVWTTTPWTVPASEAVAVNGK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV+           PAN   +             +VA+DL+  +  K G     + 
Sbjct: 249 FDYSVVK-----------PANDDRQ------------FVVATDLLDGVADKLGWEDFEVV 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K L+G+DL+     HP  +R   +V   DY+T ++GTGLVHTAPG+G +DY   L++ LP
Sbjct: 286 KHLSGNDLDGMVTKHPYIDRNI-LVGTADYVTADAGTGLVHTAPGYGDDDYHFGLEHNLP 344

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G  F G+    D +   +K L+E  SL++EEP +H YP+DWRTKK
Sbjct: 345 IFAPINDQGVLTKENGADFDGV-FYQDADDISLKKLEEAGSLLLEEPLKHSYPFDWRTKK 403

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S++  RQ  +DA+ +V + P
Sbjct: 404 PIIFRATDQWFVSIDKMRQDILDALEEVNYQP 435



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 179/337 (53%), Gaps = 27/337 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +     GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++  
Sbjct: 607 PNKVVKQMGAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTGDFKPT 666

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++SY+ L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AK
Sbjct: 667 DDTVSYEKLNSVDQYMLVKLNHFLKEMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     S  RRS QTV    LL++V+++ PILPH  E+VW+ +            +F
Sbjct: 727 DVLYIEPADSHARRSMQTVFYNILLTMVKLLTPILPHTTEEVWEYM--------DEPEDF 778

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  ++ P  D +        +  W + +++R+ V K LE AR  K IG SLEA+V L+  
Sbjct: 779 VQLTEIP--DPQTFANEAELLEQWDRFMDVRSHVLKGLEEARNAKQIGKSLEAQVDLY-- 834

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
              L+ + +++ T     D  + + ++  V  L   P  L      + +Y     D V +
Sbjct: 835 ---LSDQQQQLLT-----DLDEDVALLLGVSALHIHP--LAEAPADAAKY----DDGVAV 880

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            VS A G  C RC      VGS   +P LC+RC +++
Sbjct: 881 KVSPAVGETCARCRMVKEDVGSDDAYPMLCARCAKIV 917


>gi|390630016|ref|ZP_10258006.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
 gi|390484807|emb|CCF30354.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
          Length = 929

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 199/333 (59%), Gaps = 35/333 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR G+ ADW+NPYLTL PE+EAAQ+ VFG+M+ +  IYRGKKPV WS SS +ALA 
Sbjct: 136 MADFKRLGISADWDNPYLTLLPEFEAAQLRVFGEMAKKNLIYRGKKPVFWSWSSESALAM 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY   H   S  A F          GLL+    D     WTTTPWTVPA+ A+A+NA
Sbjct: 196 AEIEY---HDIESNTAFFS--ERVKDGKGLLDN---DTYFIAWTTTPWTVPASQALALNA 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
             +Y+ ++ +          ++KK               IVAS L+  +  K+G  +  +
Sbjct: 248 DFEYSQIQPKG---------SDKK--------------YIVASALLGAVAPKFGWDEYEV 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G +LE     HP  +R+  +V+  DY+T ++GTG VHTAPG G++D+ T  +Y +
Sbjct: 285 VATFTGKELEMVTTEHPFMDREI-LVVNADYVTADAGTGAVHTAPGFGEDDFATGQRYNM 343

Query: 240 PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           P++  VDD+GK T EAG  F G+    D +   ++ L+E  +LI+ EP  H YP+DWRTK
Sbjct: 344 PVIMNVDDQGKMTAEAGPDFEGV-FYQDADKVALQKLEEADALILHEPVVHSYPFDWRTK 402

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRA  QWFAS++ FRQ  +DA+  V + P
Sbjct: 403 KPVIFRAVPQWFASIDSFRQDILDALDDVTFQP 435



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 40/335 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +   +L Q S+ YRK+R T+R+LL N  D+    +++++DD
Sbjct: 615 GAEIIRLWVTSVDSSADVRVSMDLLSQTSETYRKIRNTMRFLLANTSDFDPKADTVAFDD 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY   +   +V +I+ +Y+ Y F  + +++  FI VDLS FY D AKD LY    
Sbjct: 675 LVAADQYFYARFNKLVADIKAAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAP 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               R S QTVL   L+ + +++ PILPH AE++++ L      E+G   +F + ++ PV
Sbjct: 735 KGHARLSLQTVLYKVLVDLDKLLLPILPHTAEEIFEYLEH----EEG---DFAYLTEMPV 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF-TDDA----- 571
           +++      +  +  W + + LR  VNK LEVAR  KLIG   EA V LF TDD      
Sbjct: 788 VEDIANADEL--MAKWSQFMTLRDAVNKALEVARDAKLIGKPAEAAVTLFLTDDQKAWLD 845

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
           SL   +R              + ++SQ+ V  +   G   +            D   I V
Sbjct: 846 SLGQDVR-------------VLLLVSQLHVASADEAGDATDF-----------DGYKIAV 881

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + AEG +  R   Y T +G+  + P L +   +++
Sbjct: 882 AHAEGEESPRDRMYHTDLGADPDFPMLSAHEAQIV 916


>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|417913399|ref|ZP_12557066.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU109]
 gi|420165268|ref|ZP_14671972.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
 gi|420206486|ref|ZP_14711996.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
 gi|421607305|ref|ZP_16048551.1| isoleucyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
 gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|341655681|gb|EGS79405.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU109]
 gi|394236435|gb|EJD81969.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM088]
 gi|394278325|gb|EJE22642.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM008]
 gi|406657097|gb|EKC83490.1| isoleucyl-tRNA ligase [Staphylococcus epidermidis AU12-03]
          Length = 916

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 190/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVNGHK---------------------YIVAQALSEAVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|389815968|ref|ZP_10207205.1| isoleucyl-tRNA ligase [Planococcus antarcticus DSM 14505]
 gi|388465462|gb|EIM07779.1| isoleucyl-tRNA ligase [Planococcus antarcticus DSM 14505]
          Length = 920

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 218/387 (56%), Gaps = 52/387 (13%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV  DW+NPY+TL P YEA QIEVFG+M+ +GYIY+G KPV+WSPSS ++LAEA
Sbjct: 137 SQFKRIGVRGDWDNPYVTLKPAYEARQIEVFGKMANKGYIYKGLKPVYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L E      L +WTTTPWT+PAN  ++V+AK
Sbjct: 197 EIEYHDKK-SPSIYVSFPVTDG----KGVLAE---GTKLVIWTTTPWTIPANLGISVHAK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
           L YA V +   L                          IVA +L+  +  E +W    VI
Sbjct: 249 LNYAEVSVNGSL-------------------------YIVAQELLKEVAEELEWTDYEVI 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            + L G++LE+    HP+ +R   V++ G+++TT+SGTG VHTAPGHG++D++   KYGL
Sbjct: 284 -RVLQGAELEHILTKHPLYDRASLVML-GEHVTTDSGTGCVHTAPGHGEDDFLIGKKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVD+ G  T+EA  F G +     N ++ + LD   +L       H YP+DWRTKK
Sbjct: 342 DVLCPVDERGVMTDEAPGFEG-EFYDKANKSITEALDNAGALEKLSFITHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSS 349
           P I+RAT QWF S++ FR   + AI +  + P           ++   +     R+W   
Sbjct: 401 PVIYRATAQWFVSIDAFRDQILKAIRETSFTPAWGETRLYNMLRDRGDWNISRQRVWGVP 460

Query: 350 VDY----TGDVMIGPQVLRQMSDIYRK 372
           +       GD +I  + +  ++D++R+
Sbjct: 461 IPVFYAENGDPIITEETIAHIADLFRE 487



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 211/361 (58%), Gaps = 31/361 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDYT DV +  +  +Q+S++YR
Sbjct: 586 TLDGNGRKMSKSLGNV-IVPSKVMNQMGADILRLWVASVDYTADVRVSDENFKQVSEVYR 644

Query: 372 KLRGTLRYLLGNLHDW-RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R TL++L GNL D+    + ++++D+  +DQY + +L+ +V+ +R+SYE+Y+F  I+ 
Sbjct: 645 KIRNTLKFLHGNLADFSEKEHRVAFEDMREMDQYMVMKLQKMVETVRKSYETYEFSTIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  +   DLS+FY DVAKD +Y        RR+ QTV+   L++I+++ API+PH A++
Sbjct: 705 ALNNYCANDLSSFYLDVAKDVVYIESADHPHRRAMQTVMFDSLMAILKLSAPIIPHTADE 764

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W  L F    +++     E V  + +  LDEKW  F           +++R +V K LE
Sbjct: 765 LWSYLSFVEEESVQLTDFPEAVSNAAFEGLDEKWSRF-----------MDVRDDVLKALE 813

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            AR  K IG SLEAKV ++ ++  LA+ L  +       + L ++FI+S+ E       G
Sbjct: 814 EARAAKTIGKSLEAKVTVYGNE-ELATLLASI------DENLAQLFIVSKYEY-----GG 861

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
              N P   E+ V+  ++V + V +AEG KC+RCW  S ++G    HP LC RC  V+  
Sbjct: 862 TQDNAP---EHAVQ-LNEVSVTVEKAEGEKCQRCWTISEEIGQSKAHPALCPRCASVVET 917

Query: 669 Q 669
           Q
Sbjct: 918 Q 918


>gi|417810109|ref|ZP_12456789.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius GJ-24]
 gi|335349981|gb|EGM51479.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius GJ-24]
          Length = 931

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L+E   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWTTTPWTIPASEGITIDATF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 250 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 287 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 406 IIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 181/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +  +  +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMESFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEEYAQ 781

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 782 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 835 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  + PTLC+ C E++
Sbjct: 875 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLPTLCASCAEIV 918


>gi|420211915|ref|ZP_14717271.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
 gi|394280425|gb|EJE24706.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM001]
          Length = 916

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 190/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVNGHK---------------------YIVAQALSEAVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|418606287|ref|ZP_13169575.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU057]
 gi|420169737|ref|ZP_14676315.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
 gi|374408680|gb|EHQ79492.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU057]
 gi|394243037|gb|EJD88411.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM070]
          Length = 852

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/324 (43%), Positives = 189/324 (58%), Gaps = 38/324 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE+
Sbjct: 75  FKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAEI 134

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L 
Sbjct: 135 EYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPELN 186

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVIK 180
           Y          G      +K                IVA  L   +    G     + ++
Sbjct: 187 Y----------GQYNVNGHK---------------YIVAQALSEAVAEALGWDKDSIQLE 221

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY LP
Sbjct: 222 KEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLP 280

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKKP
Sbjct: 281 VISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKKP 339

Query: 301 TIFRATEQWFASVEGFRQAAMDAI 324
            IFRAT QWFAS+   RQ  +DAI
Sbjct: 340 VIFRATPQWFASINKVRQDILDAI 363



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 510 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 566

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 567 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 626

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 627 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 686

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 687 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 737

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 738 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 782

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 783 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 828

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 829 EELGSVGELEHLCPRCQEVV 848


>gi|418324566|ref|ZP_12935800.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
 gi|365225253|gb|EHM66498.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
          Length = 917

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 37/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D++NPY+TL PEYEAAQ+ +FG+M+ +G IY+G KPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVSGDFDNPYITLKPEYEAAQLRLFGEMAAKGLIYKGLKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +         +++E   D    +WTTTPWT+PAN A+ V+ +L
Sbjct: 198 IEYHDKR-SPSIYVAFDVKDG----KNVVDE---DAQFIIWTTTPWTLPANVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLV-I 179
            Y                       G  L D  K   +V  DLV  +     W T  + +
Sbjct: 250 TY-----------------------GEYLVDGHKY--VVGKDLVDDVAENLGWNTDDIEL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K  +G DLE     HP    +  ++I GD++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 VKEFSGKDLEYVEAQHPFLEDRTVLLINGDHVTTDAGTGCVHTAPGHGEDDYIVGTKYDL 344

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SPVD +G  TEEAG F+G +     N  +   L E  SL+  +   H YP+DWRTKK
Sbjct: 345 PVISPVDYKGVLTEEAGPFAG-EFYDKANKPITDLLKENGSLLKLDFITHSYPHDWRTKK 403

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS++  RQ  +DAI +  +
Sbjct: 404 PVIFRATPQWFASIDKVRQDILDAIEETHF 433



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 202/376 (53%), Gaps = 42/376 (11%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P     +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 575 RNRSPYKMLLSHGFFMDGEGKKMSK--SLGNV-IVPEQIVKQKGADIARLWVSSVDYLAD 631

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
             I  ++++Q +D+YRK+R TLR++LGN++D+    ++I+  DL  +D+Y L +      
Sbjct: 632 ARISDEIIKQTADVYRKIRNTLRFMLGNVNDFNPETDAIAEADLLEVDRYILNRFREFTA 691

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +  ++Y+++ +  I+Q +Q FI V+LSNFY D  KD LY    ++  RRS QTVL   ++
Sbjct: 692 STIKNYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSAHKRRSMQTVLYQIVV 751

Query: 475 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI 530
            + +++APIL H A++VW  +P     +  L D    + V       L EKW TF     
Sbjct: 752 DMTKLLAPILAHTADEVWSYIPHVQEESVHLTDMPKVQDVDTE----LVEKWNTF----- 802

Query: 531 YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTL 590
                 ++LR +VN+ LE+AR  K+IG SLEAKV + ++    A+   +        + L
Sbjct: 803 ------MKLRDDVNRALEIARNEKVIGKSLEAKVTIGSNSDFDATEFLQGF------EDL 850

Query: 591 QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVG 650
           Q++FI SQ EV+ +            G     G     I V  A+G KC+RCWNYS  +G
Sbjct: 851 QQLFITSQAEVVDNVE---------GGASYTHGD----IKVEHADGEKCQRCWNYSEDLG 897

Query: 651 SFVEHPTLCSRCYEVL 666
           S  E   LC RC  V+
Sbjct: 898 SVGELTDLCPRCQAVV 913


>gi|227544867|ref|ZP_03974916.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|338204195|ref|YP_004650340.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185141|gb|EEI65212.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|336449435|gb|AEI58050.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 950

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 156 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 215

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 216 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 267

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV+           PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 268 FDYSVVK-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 304

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G +LE     HP  +R   V +  DY+T ++GTGLVHTAPG+G +DY    KY LP
Sbjct: 305 DHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLP 363

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 364 IFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 422

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 423 PIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++ +  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKALINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  +            +FV  ++ P 
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM--------NEPEDFVQLTEIP- 804

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 805 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVDLYLTDDQKQL 861

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V P+         P   +   +G   V + V+ 
Sbjct: 862 LDSLNE---------NIQLLLGVSALHVHPAD------EAPADADQYNDG---VAVKVTT 903

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS + +P LC+RC  ++
Sbjct: 904 ANGETCARCRMVKEDVGSDLAYPELCARCAAIV 936


>gi|291460835|ref|ZP_06600216.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380425|gb|EFE87943.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 544

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/335 (42%), Positives = 199/335 (59%), Gaps = 40/335 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI++G KPV+WSP++ TALAEAE
Sbjct: 143 QFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIFKGLKPVYWSPATETALAEAE 202

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNA 120
           +EY + H S SIY   RM     +   LL++  F  D  + +WTTTPWT+PAN A+ +N 
Sbjct: 203 IEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFVLIWTTTPWTLPANVAICLNE 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
              Y +                 K+  GN         +I+A DL  +     G +   +
Sbjct: 256 NFDYGLY----------------KTEKGN---------LILAKDLAESAFKDIGIENAEL 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   G +LE   Y HP   R   +VI GD++T ++GTG VHTAPGHGQ+DYV  L Y L
Sbjct: 291 LKEFKGKELEYTTYQHPFLER-TGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLSYKL 349

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           P++SP+D  G  TEEAG+ F GL V  + N A++KYL E   ++  +   H YP+DWR+K
Sbjct: 350 PVVSPIDHRGCLTEEAGELFKGL-VYSEANKAIIKYLTETGHILKMQEINHSYPHDWRSK 408

Query: 299 KPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
            P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 409 TPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443


>gi|417645974|ref|ZP_12295859.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 916

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 189/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
            Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 NYG----QYNVNGHK---------------------YIVAQALSEAVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|417656667|ref|ZP_12306350.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|418609846|ref|ZP_13172980.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU065]
 gi|418624916|ref|ZP_13187576.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU125]
 gi|418664727|ref|ZP_13226193.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU081]
 gi|419768667|ref|ZP_14294783.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-250]
 gi|419772610|ref|ZP_14298641.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
 gi|420172806|ref|ZP_14679304.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
 gi|420209527|ref|ZP_14714964.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
 gi|39932185|sp|Q8CSX1.1|SYI_STAES RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|374406182|gb|EHQ77085.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU065]
 gi|374410173|gb|EHQ80934.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU081]
 gi|374826181|gb|EHR90089.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU125]
 gi|383359237|gb|EID36667.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-K]
 gi|383359493|gb|EID36916.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-250]
 gi|394241483|gb|EJD86897.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM067]
 gi|394278974|gb|EJE23286.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM003]
          Length = 916

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 189/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
            Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 NYG----QYNVNGHK---------------------YIVAQALSEAVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7.1|SYI_SYNWW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 198/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLTL P +E+ QI+VFG+M+ +G+IY+G KPV+W     TALAEAE+
Sbjct: 143 FKRLGVRGDWEDPYLTLSPGFESIQIKVFGEMAKKGFIYKGLKPVYWCGDCETALAEAEV 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E  VS SIY  F +        G+L E   D  + +WTTTPWT+PAN  + ++    
Sbjct: 203 EYNE-KVSPSIYVKFPVKDG----KGVLPE---DAFVIIWTTTPWTLPANTGICLHPGFD 254

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y ++E++                 G      + +   VA +L       W    ++ K  
Sbjct: 255 YVLLEVK-----------------GEKYLLAQGLLEAVAGEL------GWDNYQILDK-Y 290

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G +LE     HP   R   +V+G +++T E+GTG VHTAPGHG++D+    +YGL ++S
Sbjct: 291 KGEELERVICHHPFFARDSLLVLG-EHVTLEAGTGCVHTAPGHGEDDFHVGQEYGLEVIS 349

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G+FT EA KF GL V  D N AV++ L+++  L+     EH+YPY WR K+P I+
Sbjct: 350 PVDDRGRFTAEAEKFQGLYV-HDANKAVIEELEKRNMLLKAASIEHQYPYCWRCKQPIIY 408

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS++GFRQ A++AI  VKW+P
Sbjct: 409 RATEQWFASIDGFRQDALNAIDTVKWIP 436



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/330 (38%), Positives = 192/330 (58%), Gaps = 24/330 (7%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 397
           GAD+LRLWVSS DY  DV + P +++Q ++ YRK+R T R++LGNL D+  G   +SYD 
Sbjct: 617 GADILRLWVSSADYRNDVSVSPNIIKQSAEAYRKIRNTCRFILGNLFDFDPGKERVSYDK 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQ+AL +L+ +++ + ++YE Y+F  +F  +  F  VDLSN YFD+ KD+LY    
Sbjct: 677 LSELDQWALLKLDKLIRRVTKAYEDYEFHVVFHSMHNFCTVDLSNIYFDILKDKLYCSHP 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               R++ QTVL   + ++V ++ PIL   +E++W     +Y  ++G  AE V   +WP 
Sbjct: 737 QDAERKAAQTVLYDIINALVVMLTPILAFSSEEIW-----SYLKKEGQ-AESVQLLEWPQ 790

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            ++++    +       ++LELR  V K LE AR+ K+IG SL A + ++      +   
Sbjct: 791 ANDEYLNQAIENRM--SRVLELREVVTKALEEARSKKVIGHSLGAWITIYA-----SPEW 843

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            E+  A      L++IFI+S+ E+ P T        P     L EG + + + V  AEGS
Sbjct: 844 TELLKA---TAGLEKIFIVSRAELKPET------EAPAEALAL-EGVEGIRVMVQAAEGS 893

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           KCERCW     VG  ++HPTLC RC EV+A
Sbjct: 894 KCERCWIIENSVGEDLKHPTLCQRCAEVVA 923


>gi|392940768|ref|ZP_10306412.1| isoleucyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
 gi|392292518|gb|EIW00962.1| isoleucyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
          Length = 932

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 206/331 (62%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+V+      GD                       I+A D++ T++ +   +   I 
Sbjct: 256 FDYALVKF-----GDEV--------------------YIMAKDMLDTVKKEANLSDYEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL 
Sbjct: 291 AVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGLE 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K P
Sbjct: 350 VLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAETRITHSYPHCWRCKSP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 409 IIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 198/327 (60%), Gaps = 24/327 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R  ++K LE+ART K IG SLEA+V ++      + 
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDIRKYISKALEIARTDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L +     +D   L+ +FI+S+V VL      + +N   S +Y ++      I V+ A 
Sbjct: 846 ELYDFFKGFND---LEYMFIVSKV-VLHQPEEPVPQNAYESEDYNLK------IVVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 896 GEKCERCWMYSETVGTIKEHPTICARC 922


>gi|420202092|ref|ZP_14707687.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
 gi|394270065|gb|EJE14588.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM018]
          Length = 916

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 189/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
            Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 NYG----QYNVNGHK---------------------YIVAQALSEAVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|418325054|ref|ZP_12936264.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU071]
 gi|418411613|ref|ZP_12984880.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
 gi|420163467|ref|ZP_14670214.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
 gi|420167550|ref|ZP_14674202.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
 gi|365228960|gb|EHM70132.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU071]
 gi|394235156|gb|EJD80730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
 gi|394237578|gb|EJD83064.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
 gi|410892339|gb|EKS40133.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BVS058A4]
          Length = 916

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 189/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
            Y     Q  + G                        IVA  L   +    G     + +
Sbjct: 250 NYG----QYNVNGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 209/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILI 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV +  ++  + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGNNETFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYA 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|333371304|ref|ZP_08463259.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
 gi|332976331|gb|EGK13187.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
          Length = 931

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 194/330 (58%), Gaps = 35/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G+  DW +PY+TL P YEA QI +FG+M  +GY+Y+G + ++WSPSS +ALA+AE
Sbjct: 145 QFKRLGILGDWEHPYVTLAPRYEAKQIRIFGEMVKKGYVYQGYRSIYWSPSSESALADAE 204

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   S SIY  F +      + GL    + +  + +WTTTPWT+PAN  +AVNA  
Sbjct: 205 VEYKEKR-SPSIYVTFPV----KESRGLFP--VENAYVVIWTTTPWTIPANLGIAVNADF 257

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YA+V+                           +  +++A +LV  +    G T      
Sbjct: 258 TYALVKT-------------------------GERHLLLAEELVEDVMKVAGITSFETVA 292

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G++LE     HP  +R+ P +I GD++T ++GTG VHTAPGHG ED+    KY L +
Sbjct: 293 TFKGAELEGVVCRHPFYDRESP-LICGDHVTLDAGTGCVHTAPGHGAEDFELGKKYNLGV 351

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVD++G+FT EA  F G+    D N  V + L++Q  L+      H+YP+DWRTKKP 
Sbjct: 352 LCPVDEKGRFTAEAPGFEGM-FYDDANKVVTEKLEKQGDLLKLSFITHQYPHDWRTKKPV 410

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWF S++GFR   ++ I +VKW P
Sbjct: 411 IFRATEQWFVSIDGFRDKLLEEIQKVKWTP 440



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 41/344 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P Q    YGAD+LRLWV+SVDY  DV +  ++L+Q++++YRK+R T R+LLGNL D++  
Sbjct: 613 PLQVMKTYGADILRLWVASVDYQADVRVSEKILKQIAEVYRKIRNTFRFLLGNLSDFQPE 672

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +    L  +D+YAL +L+ +V+ + + +E+Y+F  ++  I  F  V LS FY DV K
Sbjct: 673 TDRVEPSRLDELDRYALVKLQRLVEQVVKGFENYEFHSVYTHIHHFCTVFLSQFYLDVLK 732

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY        RRS QTV+   LL +VR++ PILPH  E+VW+ +P       G   E 
Sbjct: 733 DRLYILPQGDEKRRSSQTVMYEILLGLVRMVHPILPHTTEEVWKFIP-------GVREES 785

Query: 510 VFESKWP-----VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
           V  + +P     +LD    +        W  ++ELR    K LE AR  K+IG+SL A++
Sbjct: 786 VLLTDFPQVETDILDPSLES-------KWDALVELRDVALKALEEARNEKVIGNSLGAQL 838

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVE 622
            L+  + +   RL +          L+ +FI+SQV +      P G   +          
Sbjct: 839 ELYPSEENF--RLLDSGV------DLEELFIVSQVRLFQPGERPEGNTVD---------- 880

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               + + V+ A+G KC+RCW  +  VG    HP LC RC E++
Sbjct: 881 -STSLQVKVNPAQGEKCQRCWMITPTVGQNEHHPDLCHRCGEIV 923


>gi|417642913|ref|ZP_12292991.1| isoleucine--tRNA ligase [Staphylococcus warneri VCU121]
 gi|330686341|gb|EGG97946.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 916

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 196/329 (59%), Gaps = 36/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G++++   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLV-IK 180
           +Y    +                          K +II  +      EA +W    + ++
Sbjct: 250 KYGQYNVNG------------------------KKYIIAQALAETVAEALEWDQDTIQLE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY LP
Sbjct: 286 KEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++D+G FTEE G F G+      N AV   L ++ +L+      H YP+DWRTKKP
Sbjct: 345 VISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTKKDALLKLNFITHSYPHDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            IFRAT QWFAS+   RQ  +DAI   ++
Sbjct: 404 VIFRATPQWFASINKVRQDILDAIEDTQF 432



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 204/376 (54%), Gaps = 42/376 (11%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI 530
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF     
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF----- 801

Query: 531 YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTL 590
                 + LR +VN+ LE AR  K+IG SLEAKV + ++    A+   +        D L
Sbjct: 802 ------MNLRDDVNRALEAARNEKVIGKSLEAKVVIGSNQDFNATEFLQQF------DDL 849

Query: 591 QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVG 650
           Q++FI SQ EV+    NG+       G+          I +  AEG KCERCWNYS Q+G
Sbjct: 850 QQLFITSQAEVVDQVDNGVSYQ---HGD----------IRIEHAEGEKCERCWNYSDQLG 896

Query: 651 SFVEHPTLCSRCYEVL 666
           S  E   LC RC EV+
Sbjct: 897 SVGELDHLCPRCQEVV 912


>gi|184153233|ref|YP_001841574.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|254782415|sp|B2G6L2.1|SYI_LACRJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|183224577|dbj|BAG25094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 931

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 204/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 137 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 197 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV            PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 249 FDYSVVN-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G +LE     HP  +R   V +  DY+T ++GTGLVHTAPG+G +DY    KY LP
Sbjct: 286 DHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 345 IFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 403

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 404 PIIFRATDQWFVSIEKMRQNILDALEDVKYHP 435



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  +            +FV  ++ P 
Sbjct: 735 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM--------NEPEDFVQLTEIP- 785

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 786 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVDLYLTDDQKQL 842

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V P+         P   +   +G   V + V+ 
Sbjct: 843 LDSLNE---------NIQLLLGVSALHVHPAD------EAPADADQYNDG---VAVKVTT 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS   +P LC+RC  ++
Sbjct: 885 ANGETCARCRMVKEDVGSDPAYPELCARCAAIV 917


>gi|148543832|ref|YP_001271202.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|148530866|gb|ABQ82865.1| Isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 960

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 204/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 166 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 225

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 226 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 277

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV            PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 278 FDYSVVN-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 314

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G +LE     HP  +R   V +  DY+T ++GTGLVHTAPG+G +DY    KY LP
Sbjct: 315 DHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLP 373

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 374 IFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 432

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 433 PIIFRATDQWFVSIEKMRQNILDALEDVKYHP 464



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 644 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 703

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 704 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 763

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  +            +FV  ++ P 
Sbjct: 764 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM--------NEPEDFVQLTEIP- 814

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 815 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVDLYLTDDQKQL 871

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V P+         P   +   +G   V + V+ 
Sbjct: 872 LDSLNE---------NIQLLLGVSALHVHPAD------EAPADADQYNDG---VAVKVTT 913

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS   +P LC+RC  ++
Sbjct: 914 ANGETCARCRMVKEDVGSDPAYPELCARCAAIV 946


>gi|227364736|ref|ZP_03848785.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682637|ref|ZP_08162154.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070195|gb|EEI08569.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978476|gb|EGC15426.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 950

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 204/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 156 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 215

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 216 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 267

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV            PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 268 FDYSVVN-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 304

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G +LE     HP  +R   V +  DY+T ++GTGLVHTAPG+G +DY    KY LP
Sbjct: 305 DHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLP 363

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 364 IFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 422

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 423 PIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 174/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  +            +FV  ++ P 
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYM--------NEPEDFVQLTEIP- 804

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 805 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVDLYLTDDQKQL 861

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V P+         P   +   +G   V + V+ 
Sbjct: 862 LDSLNE---------NIQLLLGVSALHVHPAD------EAPADADQYNDG---VAVKVTT 903

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS   +P LC+RC  ++
Sbjct: 904 ANGETCARCRMVKEDVGSDPAYPELCARCAAIV 936


>gi|417885545|ref|ZP_12529699.1| isoleucine--tRNA ligase [Lactobacillus oris F0423]
 gi|341595467|gb|EGS38116.1| isoleucine--tRNA ligase [Lactobacillus oris F0423]
          Length = 931

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 202/331 (61%), Gaps = 35/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEAE
Sbjct: 138 DFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + +A             +L++   +  L VWTTTPWTVPA+ AVAVN K 
Sbjct: 198 VEYHDVVAKTAFFA-----EQVKDGKDILDD---NTYLVVWTTTPWTVPASEAVAVNGKF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            Y+VV+           PAN   +             +VA+DL+  +  K G   L + K
Sbjct: 250 DYSVVK-----------PANDDRQ------------FVVATDLLDGVADKLGWEDLEVVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L+G+DL+     HP  +R   +V   DY+T ++GTGLVHTAPG+G +DY   L++ LPI
Sbjct: 287 HLSGNDLDGMVTKHPYIDRDI-LVGTADYVTADAGTGLVHTAPGYGDDDYHFGLEHNLPI 345

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +P+ D+G  T+E G  F G+    D +   +K L+E  SL++EEP +H YP+DWRTKKP
Sbjct: 346 FAPITDQGVLTKENGADFDGV-FYQDADDISLKKLEEAGSLLLEEPLKHSYPFDWRTKKP 404

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT+QWF S++  RQ  +DA+ +V + P
Sbjct: 405 IIFRATDQWFVSIDKMRQDILDALEEVNYQP 435



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 179/341 (52%), Gaps = 35/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +     GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++  
Sbjct: 607 PNKVVKQMGAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTGDFKPT 666

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++SY+ L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AK
Sbjct: 667 DDTVSYEKLNSVDQYMLVKLNHFLKEMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDGS 505
           D LY     S  RRS QTV    LL++V+++ PILPH  E+VW+ +     F    E   
Sbjct: 727 DVLYIEPADSHARRSMQTVFYNILLTMVKLLTPILPHTTEEVWEYMDEPEGFVQLTEIPD 786

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
              F  E++   L E+W  F           +++R+ V K LE AR  K IG SLEA+V 
Sbjct: 787 PQTFANEAE---LLEQWDRF-----------MDVRSHVLKGLEEARNAKQIGKSLEAQVD 832

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+     L+ + +++ T     D  + + ++  V  L   P  L      + +Y     D
Sbjct: 833 LY-----LSDQQQQLLT-----DLDEDVALLLGVSALHIHP--LAEAPADAAKY----DD 876

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V + VS A G  C RC      VGS   +P LC+RC +++
Sbjct: 877 GVAVKVSPAVGETCARCRMVKEDVGSDDVYPMLCARCAKIV 917


>gi|257125155|ref|YP_003163269.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049094|gb|ACV38278.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 930

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 198/331 (59%), Gaps = 37/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  +W+NPY+TL PEYEA Q++VF ++   GY+Y+G KPV+WSP++ TALAEAE+
Sbjct: 148 FKRLGILGNWDNPYITLRPEYEAEQLKVFKEIYENGYVYKGLKPVYWSPTTETALAEAEI 207

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY +   S SIY  F        T  LL++  + +  + +WTTTPWT+PAN  V ++ + 
Sbjct: 208 EYKDVE-SHSIYVKFE------GTQDLLDKLGVEEASILIWTTTPWTLPANLGVFLHPEF 260

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y +                 K+  GN         I+VA +L  T+    G    + K 
Sbjct: 261 DYGLY----------------KTEKGN---------IVVAKELAETVFKTLGISYELLKE 295

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G++LE   Y HP  +R+  V++ GDY+T ++GTG VH+APGHG +DY  S KY L +L
Sbjct: 296 FKGTELEKTHYRHPFLDREGLVML-GDYVTVDAGTGAVHSAPGHGADDYNYSRKYELGVL 354

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD G  T+EAGK+ G+      NV +V+ L E   L+    + H YP+DWR+KKP I
Sbjct: 355 SPVDDRGHMTKEAGKYEGMFYAKASNV-IVQDLTESGHLLHHSKFVHSYPHDWRSKKPVI 413

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           FRATEQWF SV+    R+ A+ A+  V++VP
Sbjct: 414 FRATEQWFISVDESDIRENAIKALDDVEFVP 444



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 190/340 (55%), Gaps = 31/340 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 616 LPKDITEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 675

Query: 390 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            N  + Y+D+  ID++A+ +LE +     E Y+ Y+F+ +FQ I  F  +++S+FY D+ 
Sbjct: 676 ANDKVDYNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIV 735

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY  GTTS  RRS QTVL+  L  +VR+IAP+L   A+++W+ +P     E     E
Sbjct: 736 KDRLYCEGTTSIERRSTQTVLTEVLKVLVRIIAPVLSFTADEIWERIP-----ETLKEEE 790

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-- 566
            V  SKW     ++    + +   W KI  LR EVNK LE  R   LIG SL+A+V L  
Sbjct: 791 SVHLSKWIEARPEYLNEELAQK--WDKIARLRREVNKKLEAERQNGLIGHSLDARVILNI 848

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
             D+ S      E        + +  +FI+SQV+ +               E  +EG   
Sbjct: 849 ANDEYSFIKDYTE--------NEVSDLFIVSQVKFVNDN----------LAESEIEG--- 887

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + I V +A G KCERCW Y  +VG    HP +C RC  VL
Sbjct: 888 INIAVEKASGEKCERCWKYDEEVGHNHNHPDVCPRCAGVL 927


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 208/332 (62%), Gaps = 32/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEANQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++++ L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIVDD-LNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
             YA+ +      GD                       I+A D++ T+  EA  G   ++
Sbjct: 256 FDYALAKF-----GDEV--------------------YIMAKDMLDTVKKEAHLGDYEIV 290

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                G DLE  + +HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL
Sbjct: 291 -ALFKGKDLEGMKAIHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGL 348

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K 
Sbjct: 349 EVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAESHITHSYPHCWRCKS 407

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRATEQWFASVEGFR+ A+ +I +V W P
Sbjct: 408 PIIFRATEQWFASVEGFRKEALKSIKEVNWYP 439



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/335 (36%), Positives = 201/335 (60%), Gaps = 24/335 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISKEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
             S  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 AASKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R +++K LE+AR+ K IG SLEA+V ++      + 
Sbjct: 793 PEVQEKYNNPYI--IEKWEKLFDIRKDISKALEIARSDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E     +D   L+ +FI+S+V VL      + ++   S +Y ++      I V+ A 
Sbjct: 846 ELYEFFKRFND---LEYVFIVSKV-VLHQPEETVPQDAYKSEDYDLK------IIVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
           G KCERCW YS  VG+  EHPT+C+RC   +  QP
Sbjct: 896 GEKCERCWMYSDTVGTIKEHPTICARCASHIEHQP 930


>gi|116334043|ref|YP_795570.1| isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269273|sp|Q03QI3.1|SYI_LACBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116099390|gb|ABJ64539.1| Isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 937

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 202/330 (61%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL PE+EAA++ VFG+M+ +G IY+GKKPV+WS SS +A+AEAE+
Sbjct: 139 FKRLGVSAEWDNPYLTLKPEFEAAEVRVFGEMAKRGLIYKGKKPVYWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   ++V       G+L+    D  L VWTTTPWT+P +  + ++A ++
Sbjct: 199 EYHDVTSPSAFYGE-QVVDG----KGVLD---TDTYLVVWTTTPWTIPGSEGITIDAGIE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           YAVV+           PAN          D +K   ++A+DLV      +G + V + KT
Sbjct: 251 YAVVK-----------PAN----------DDRK--FVLAADLVDQNAEMFGWEDVQVIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DL+N    HP    +  VV+ GD++TTESGTGLVHTAPG G++D+     Y LP+L
Sbjct: 288 VMGQDLDNVTAQHPFIADRKLVVMLGDFVTTESGTGLVHTAPGLGEDDFNVGALYHLPVL 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G  T EAG  F+G+    D N   +  L    +L+   PYEH YP+DWRTKKP 
Sbjct: 348 VPVDDKGYMTAEAGADFAGV-FYEDANQIALDKLKAANALLKYMPYEHSYPFDWRTKKPV 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +  +  VK+ P
Sbjct: 407 IFRATPQWFASVDKIRDEILAQLKDVKFQP 436



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 176/344 (51%), Gaps = 36/344 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVD + DV +  +   ++SD Y+KLR T+RYLL N  D+    ++I+ DD
Sbjct: 616 GADIVRLWVTSVDSSADVRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++ L+QL    K++R  Y+ Y F  I++ +  F++ DLS FY D AKD LY    
Sbjct: 676 LQPVDRHMLYQLNEFAKSVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAA 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDGSAAEFVFES 513
            S  RRS QTV     +S+ ++I PILPH AE++W  L     F    E  +  E    +
Sbjct: 736 DSPVRRSMQTVFYQIAVSLTKLITPILPHTAEEIWDFLKEPEDFVQLAEMPAVLELTDAN 795

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           + P  D+       G    W   + LR+ V K LE AR  KLIG + EA + L+ D+ + 
Sbjct: 796 EQP--DD-------GHQSAWDHFMTLRSHVLKALEEARDAKLIGKAAEAHLDLYVDEET- 845

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
             RL +          +Q+I ++S ++V  L   P   +              D + + V
Sbjct: 846 -KRLLDQLNV-----NVQQILLVSGLDVASLDQAPADALTF------------DHLAVKV 887

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
           + A G  C+RC      VGS   +P  C+RC  ++  Q  P  A
Sbjct: 888 TPAAGEVCDRCRLTKEDVGSDSAYPHFCARCAAIVR-QNFPETA 930


>gi|386728872|ref|YP_006195255.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           71193]
 gi|418978565|ref|ZP_13526365.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           DR10]
 gi|379993389|gb|EIA14835.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           DR10]
 gi|384230165|gb|AFH69412.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           71193]
          Length = 920

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 191/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 141 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 201 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 252

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 253 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI G ++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 291 YTGKELEYVVAQHPFLDRES-LVINGYHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 350 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 408

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R   +DAI
Sbjct: 409 FRATPQWFASISKVRHDILDAI 430



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 787 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 835 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 882

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 883 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 916


>gi|402830017|gb|AFR11458.1| isoleucyl-tRNA-synthetase [Lactobacillus brevis]
          Length = 937

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 202/330 (61%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL PE+EAA++ VFG+M+ +G IY+GKKPV+WS SS +A+AEAE+
Sbjct: 139 FKRLGVSAEWDNPYLTLKPEFEAAEVRVFGEMAKRGLIYKGKKPVYWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   ++V       G+L+    D  L VWTTTPWT+P +  + ++A ++
Sbjct: 199 EYHDVTSPSAFYGE-QVVDG----KGVLD---TDTYLVVWTTTPWTIPGSEGITIDAGIE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           YAVV+           PAN          D +K   ++A+DLV      +G + V + KT
Sbjct: 251 YAVVK-----------PAN----------DDRK--FVLAADLVDQNAEMFGWEDVQVIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DL+N    HP    +  VV+ GD++TTESGTGLVHTAPG G++D+     Y LP+L
Sbjct: 288 VMGQDLDNVTAQHPFIADRKLVVMLGDFVTTESGTGLVHTAPGLGEDDFNVGALYHLPVL 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G  T EAG  F+G+    D N   +  L    +L+   PYEH YP+DWRTKKP 
Sbjct: 348 VPVDDKGYMTAEAGADFAGV-FYEDANQIALDKLKAANALLKYMPYEHSYPFDWRTKKPV 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +  +  VK+ P
Sbjct: 407 IFRATPQWFASVDKIRDEILAQLKDVKFQP 436



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 176/348 (50%), Gaps = 44/348 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVD + DV +  +   ++SD Y+KLR T+RYLL N  D+    ++I+ DD
Sbjct: 616 GADIVRLWVTSVDSSADVRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++ L+QL    K++R  Y+ Y F  I++ +  F++ DLS FY D AKD LY    
Sbjct: 676 LQPVDRHMLYQLNEFTKSVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAA 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDGSAAEFVFES 513
            S  RRS QTV     +S+ ++I PILPH AE++W  L     F    E  +  E    +
Sbjct: 736 DSPIRRSMQTVFYQIAVSLTKLITPILPHTAEEIWDFLKEPEDFVQLAEMPAVLELTDAN 795

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           + P  D+       G    W   + LR+ V K LE AR  KLIG + EA + L+ D+ + 
Sbjct: 796 EQP--DD-------GHQSAWDHFMTLRSHVLKALEEARDAKLIGKAAEAHLDLYVDEET- 845

Query: 574 ASRLREMCTAKHDADTL----QRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKV 627
                     KH  D L    Q+I ++S ++V  L   P   +              D +
Sbjct: 846 ----------KHLLDQLNVNVQQILLVSGLDVASLDQAPADALTF------------DHL 883

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            + V+ A G  C+RC      VGS   +P  C+RC  ++  Q  P  A
Sbjct: 884 AVKVTPAAGEVCDRCRLTKEDVGSDSAYPHFCARCAAIVR-QNFPETA 930


>gi|347750591|ref|YP_004858156.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|347583109|gb|AEO99375.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 216/384 (56%), Gaps = 48/384 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR GV  DW NPYLTL P YEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALA+AE
Sbjct: 138 AFKRLGVRGDWENPYLTLRPAYEAEQIKVFGEMAKKGYIYKGLKPVYWSPSSESALADAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+L+    D  + +WTTTPWT+P+N  +AVN ++
Sbjct: 198 IEYKDIK-SPSIYVAFDVKDG----KGVLD---TDTKIVIWTTTPWTIPSNLGIAVNPEI 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y VV+             NK      +L++   V              +W    V+ +T
Sbjct: 250 NYVVVK----------TGGNKYLVAEALLEEVSSVL-------------EWENAEVV-QT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE     HP+  R   V++ GD++TT+SGTG VHT+PGHG++D++   KYGL ++
Sbjct: 286 VPGKKLEYIVAKHPLYGRDSLVML-GDHVTTDSGTGCVHTSPGHGEDDFLIGKKYGLDVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
             VDD+G  T++A  F GL      N  + + LD+  +L+  +   H YP+DWRTKKP I
Sbjct: 345 CAVDDKGMMTKDAPGFEGL-FYDKANKPICEALDQAGALLKLKFLTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSVDY 352
           FRAT QWFASV+ FR   + A+ +V W P           ++   +     R W   +  
Sbjct: 404 FRATSQWFASVDMFRDDILKAVEEVNWTPVWGELRMHNMIRDRGDWCISRQRAWGVPIPV 463

Query: 353 ----TGDVMIGPQVLRQMSDIYRK 372
                G+ +I  + +R +SD++RK
Sbjct: 464 FYAENGEAIITEETIRHVSDLFRK 487



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 199/340 (58%), Gaps = 30/340 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T R++LGNL+D+  
Sbjct: 603 LPGKVVEQLGADIIRLWVASVDYQADVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y++L  +D++ L +L  +VK +RE+YE Y+F  I+  +  F   DLS+FY D A
Sbjct: 663 ARHQVAYEELREVDRFMLVKLNKLVKEVREAYERYEFATIYHAVNNFCATDLSSFYMDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 506
           KD LY     +  RR+ QTVL   L+++ ++++PILPH A++VWQ +P     +++    
Sbjct: 723 KDVLYIELADNPERRAMQTVLYECLVALTKLLSPILPHTADEVWQYIPGVAEESVQLTDM 782

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            E+V       L+EKW  F           + LR +V K LE AR  K+IG SL AKV L
Sbjct: 783 PEYVDLPDASALEEKWNAF-----------MALRGDVLKALEEARNAKVIGKSLTAKVTL 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           + ++ + A  L  +  +K      +++FI+S  EV      G I + P +   L    + 
Sbjct: 832 YVNEETKA-LLDSISESK------KQLFIVSGFEVA-----GAIEDAPENALKL----EH 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V +AEG  CERCW  + +VG   +HPTLC RC +V+
Sbjct: 876 AAIVVEKAEGETCERCWVVTPEVGLDHDHPTLCPRCAQVV 915


>gi|187607938|ref|NP_001120515.1| isoleucyl-tRNA synthetase 2, mitochondrial [Xenopus (Silurana)
           tropicalis]
 gi|170285160|gb|AAI61415.1| LOC100145647 protein [Xenopus (Silurana) tropicalis]
          Length = 992

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 191/335 (57%), Gaps = 25/335 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           +SF R+G+ ADW+  Y T DP+YEA Q+++F +M  +G+IY+  KPV WSPS+RTALAEA
Sbjct: 173 SSFIRWGIMADWDKCYYTFDPKYEAKQLDIFYKMYDKGHIYQDYKPVFWSPSTRTALAEA 232

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY + H+SRSI+A F M  APP  + +++     +   VWTT PWT+PAN A+     
Sbjct: 233 ELEYNQEHISRSIFAKFPMHKAPPKLASIIDGS-SAVSTLVWTTQPWTIPANQAICYMPD 291

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+ +  +  E                         I+A+D + +     GT+L +  
Sbjct: 292 TEYAIAKCANTGEQ-----------------------YILATDRIESTALSLGTQLQVIS 328

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DLE    +HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP+
Sbjct: 329 TFKGLDLEGGICLHPTIADRLSPLLPANHVTMAKGTGLVHTAPAHGIEDYSVASHHKLPV 388

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT  AG +     VL DGN  V++ L    SL+ EE + H YPYDWRTKKP
Sbjct: 389 DCLVDESGHFTTGAGAELENKAVLTDGNETVIQMLHASKSLLKEESFVHSYPYDWRTKKP 448

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 335
            I RA++QWF +    +  A D + +VK+VP   A
Sbjct: 449 VIIRASKQWFVNTANIKDKAQDVLKKVKFVPASAA 483



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 171/344 (49%), Gaps = 34/344 (9%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGNL D+    +S+ 
Sbjct: 666 PAYGADVLRWWVAESNVFTEVLIGPAVLNSARDDINKLRNTLRFMLGNLSDFTPERDSVP 725

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             ++ +IDQY L  L++    + ++Y+ Y+F K+ ++++  +  DLS+FYF + KDRLY 
Sbjct: 726 STEMYVIDQYMLHILQDYGSKVTDAYKGYEFGKVVRLLEALVTRDLSSFYFSIIKDRLYC 785

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q LP  Y  E  SA    F + 
Sbjct: 786 DEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQYLP--YRKESDSA----FRTG 839

Query: 515 WPVLDEKWRTFPVGEIY---------FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W   +  W+   + E           F G I        +V  V   G L     E    
Sbjct: 840 WIKPNTVWKKLGLVEAIEAACSIRDAFLGSIPGKNAAEYEVTIVIDPGLL----FELMET 895

Query: 566 LFTDDASLASRLRE--MCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L  + +S  S+L E  MC+ +    +   + +  +  VL  +    + N+   G+   E 
Sbjct: 896 LQEEPSSCTSQLNELLMCS-QTSLLSDLPLDLPPEASVLKGS---FLINLE-DGDICQEE 950

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             KV +  SR E  +C RC  Y T   S       C+RC E +A
Sbjct: 951 AYKVVVQPSRKE--RCPRCRKY-TAASSLAP----CARCLEAIA 987


>gi|387602466|ref|YP_005733987.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|404478531|ref|YP_006709961.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
 gi|418309750|ref|ZP_12921301.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
 gi|283470404|emb|CAQ49615.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|365237873|gb|EHM78712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
 gi|404440020|gb|AFR73213.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
          Length = 917

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 191/322 (59%), Gaps = 32/322 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+++    D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y    +                        +K +     SD V          + ++K 
Sbjct: 250 KYGQYNVNG----------------------EKYIIAEALSDAVAEALDWDKASIKLEKE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R+  +VI G ++TT++GTG VHTAPGHG++DY+   KY LP++
Sbjct: 288 YTGKELEYVVAQHPFLDRES-LVINGYHVTTDAGTGCVHTAPGHGEDDYIVGQKYELPVI 346

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP I
Sbjct: 347 SPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVI 405

Query: 303 FRATEQWFASVEGFRQAAMDAI 324
           FRAT QWFAS+   R   +DAI
Sbjct: 406 FRATPQWFASISKVRHDILDAI 427



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 194/341 (56%), Gaps = 36/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 509 F--VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
              V E    +LD KWRTF           + LR +VN+ LE AR  K+IG SLEAKV +
Sbjct: 784 MPKVVEVDQALLD-KWRTF-----------MNLRDDVNRALETARNEKVIGKSLEAKVTI 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLVEGKD 625
            ++D   AS   E  T+    D L ++FI+SQV+V+    +   +   Y  G+ ++E   
Sbjct: 832 ASNDKFNAS---EFLTS---FDALHQLFIVSQVKVVDKLDD---QATAYEHGDIVIE--- 879

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                   A+G KCERCWNYS  +G+  E   LC RC +V+
Sbjct: 880 -------HADGEKCERCWNYSEDLGAVDELTHLCPRCQQVV 913


>gi|319892187|ref|YP_004149062.1| isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|386319541|ref|YP_006015704.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
 gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
          Length = 915

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 200/330 (60%), Gaps = 38/330 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F R GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFLRLGVNGDFDNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +      + G++ +   D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDV----KDSKGIVAD---DAKFIIWTTTPWTLPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVIK 180
            Y    +Q  ++G                        I+A  LV  +  +  W  + V++
Sbjct: 250 TY----VQMNVDGTR---------------------YIIAEALVDAVAEQLGWDKEAVVR 284

Query: 181 -KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   GS+LE     HP  +R   ++I G+++TT++GTG VHTAPGHG++D++   KYGL
Sbjct: 285 EKDFKGSELEYIEAQHPFIDR-ISLIINGEHVTTDAGTGCVHTAPGHGEDDFIVGQKYGL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            ++SP+DD+G FT E G F G+      N AV + L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 EVISPLDDKGVFTAEGGPFEGM-FYDKANQAVTELLTEKGALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
           P IFRAT QWFAS+   RQ  +DAI   K+
Sbjct: 403 PVIFRATPQWFASISKVRQDILDAIEDTKF 432



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/342 (39%), Positives = 191/342 (55%), Gaps = 40/342 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP       GAD+ RLWVSSVDY  DV I  ++L Q++D+YRK+R TLR+LLGN++D+  
Sbjct: 605 VPDTIVKQKGADIARLWVSSVDYLADVRISDEILNQVADVYRKIRNTLRFLLGNINDYNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + I+  DL  +D+Y L +L        + YES+ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDRIAEADLLEVDRYILNRLREFTAGTLDHYESFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD LY     +  RRS QTVL   L+++ +++API+PH AE+VW ++      +  L + 
Sbjct: 725 KDILYIEEKNAHKRRSMQTVLFEILVNMTKLLAPIIPHTAEEVWSHIEQVDEESVHLTNM 784

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
            A E V ++    L +KW TF           + LR +VN+ LE AR  K+IG SLEAKV
Sbjct: 785 PAKEEVDQA----LLDKWNTF-----------MALRDDVNRALEAARNEKVIGKSLEAKV 829

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            +       +S    +   +   D L ++FI+SQVE++  T           GE    G 
Sbjct: 830 KIGN-----SSSFDTLAFLEGFND-LHQLFIVSQVELVEDT----------KGEAYQHGT 873

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               I +++A+G KC RCWNYS  +GS  E   LC RC EV+
Sbjct: 874 ----IEIAKADGEKCARCWNYSESLGSVGELDDLCPRCQEVV 911


>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 908

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 193/329 (58%), Gaps = 37/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ AD+ NPY+TL PEYEAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGLLADFENPYITLLPEYEAAQIRLFGSMAEKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  FR+V    + +        D    +WTTTPWT+PAN  +AV+ +L 
Sbjct: 199 EYYDKK-SPAIYVAFRVVDGKDTLTS-------DDHFVIWTTTPWTIPANLGIAVSDELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  +E     EG                        IVA  LV  + A  G T   +  +
Sbjct: 251 YTRIE----HEGKG---------------------YIVAETLVEEVTAALGWTDYTVSGS 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G D E     HP+ +R   +VI GD++T ++ TGLVHTAPGHG++DY     YGL +L
Sbjct: 286 WNGRDFEYMTAQHPLYDR-TSLVILGDHVTADA-TGLVHTAPGHGEDDYRVGQAYGLDVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD G  T+EA  F GL    D N  +   L+E   L+  +  +H YP+DWRTKKP I
Sbjct: 344 CPVDDRGYMTDEAPGFEGL-FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVI 402

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR+  +  I +V WVP
Sbjct: 403 FRATPQWFASIKDFREDMLREIEEVNWVP 431



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 37/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGA+++RLWV+SVDY  DV       +Q+S++YRK+R T+R+LLGNL+ +     +++DD
Sbjct: 610 YGAEIVRLWVASVDYQSDVRASHDNFKQVSEVYRKMRNTIRFLLGNLNGFEPSMRVAFDD 669

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P  D++   +L+ +   + ++Y+ + F  ++ ++  F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDEFDFMAVYHLVHNFCVNELSSFYLDFTKDILYIERE 729

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RR+ QTV+   ++ + +++APILPH A++ W+ +P       G +   +F +    
Sbjct: 730 DDLRRRAVQTVMYDAVVLLTKLLAPILPHTADEAWKEVP-------GKSEASIFLTDL-- 780

Query: 518 LDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             E+  T    E   +  W K L  R +V K +E+AR  KLIG  LEAK+ L    A  A
Sbjct: 781 --EEVATLTADEQALLEKWSKFLVFRDDVLKAIEIARGEKLIGKPLEAKLIL-APKAETA 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
             L  +       D + ++  +SQVE   +       ++ Y+            I V +A
Sbjct: 838 DLLNTI-------DNVSQLLQVSQVEWAETA------DVDYA---------TTKITVMKA 875

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +G+ C RCW YST++G   EHP LC RC  V+ 
Sbjct: 876 DGAACARCWTYSTELGQNEEHPELCPRCASVIG 908


>gi|385840600|ref|YP_005863924.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
 gi|300214721|gb|ADJ79137.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 931

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L++   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYG-----EQVVDGKGVLDK---NTYMVVWTTTPWTIPASEGITIDATF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 250 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 287 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 406 IIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEKYAQ 781

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 782 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 835 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  +  TLC+ C E++
Sbjct: 875 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLSTLCASCAEIV 918


>gi|301300414|ref|ZP_07206616.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852016|gb|EFK79698.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 931

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y             G+L++   +  + VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYG-----EQVVDGKGVLDK---NTYMVVWTTTPWTIPASEGITIDATF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+                        D++K   ++A+DLV      +G   + I K
Sbjct: 250 DYAVVQHDD---------------------DERK--YVLAADLVNADAELFGWNDVKIVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LEN    HP    +  V + GD++TT++GTGLVHTAPG G++D+   +KYGL +
Sbjct: 287 TVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTAPGFGEDDFNIGVKYGLDV 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+ +  YEH YP+DWRTKKP
Sbjct: 347 YVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLLKQMDYEHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 406 IIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 39/344 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+     Y  ED   A+
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWK-----YLKEDEKYAQ 781

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
               S+ P +    + F   E  +  W + + LR+ V K LE AR  KLIG S EA V L
Sbjct: 782 L---SEMPEV----KHFNNEEKLVDLWNRFMNLRSGVFKALEEARNEKLIGKSFEAHVDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTL----QRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           +  +   A           D D L    ++  I+S ++V P         +  + E  ++
Sbjct: 835 YVSNGVQA-----------DLDALNANVRQALIVSALDVHP---------LSEAPENALK 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             D+  + V  AEG  C RC    T +GS  +  TLC+ C E++
Sbjct: 875 FNDEYAVVVEHAEGEVCPRCRMIKTDIGSDADLSTLCASCAEIV 918


>gi|339639142|emb|CCC18370.1| isoleucyl-tRNA synthetase [Lactobacillus pentosus IG1]
          Length = 932

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 200/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRGKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   R++       G+L++   D  L VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDVTSPSAFYGE-RVIDG----KGVLDD---DTYLVVWTTTPWTIPASEGITVDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGESRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP D+ +  + + GD++T +SGTGLVHTAPG+G++DY    KYGLPI 
Sbjct: 288 VKGAELENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGQKYGLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVD++G  TEEAG  F+G+    D N   +  L +   L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDNKGVLTEEAGADFAGV-FYDDANEIALGKLKDAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVQFFP 436



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 182/329 (55%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADAYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   +  P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLTDMPT 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +     W + ++LR++V K LE AR  KLIG SLEA + L+  DA   + L
Sbjct: 788 VQNYANSAELTAQ--WSRFMDLRSDVLKALEEARDAKLIGKSLEAHLDLYV-DADTQAFL 844

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             + T       ++++ ++S +++        + + P   E      D V I VS A+G 
Sbjct: 845 DGLNT------NVRQMLMVSALDM------HALSDAPADAEAF---GDTVAIKVSHADGE 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T VGS   +PTLC+RC  ++
Sbjct: 890 VCARCRMVKTDVGSDDAYPTLCARCAAIV 918


>gi|334882315|emb|CCB83312.1| isoleucyl-tRNA synthetase [Lactobacillus pentosus MP-10]
          Length = 932

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 200/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRGKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   R++       G+L++   D  L VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDVTSPSAFYGE-RVIDG----KGVLDD---DTYLVVWTTTPWTIPASEGITVDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGESRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP D+ +  + + GD++T +SGTGLVHTAPG+G++DY    KYGLPI 
Sbjct: 288 VKGAELENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGQKYGLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVD++G  TEEAG  F+G+    D N   +  L +   L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDNKGVLTEEAGADFAGV-FYDDANEIALGKLKDAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVQFFP 436



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 181/329 (55%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADAYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   +  P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLTDMPT 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +     W + ++LR++V K LE AR  KLIG SLEA + L+  DA     L
Sbjct: 788 VQNYANSAELTAQ--WSRFMDLRSDVLKALEEARDAKLIGKSLEAHLDLYV-DADTQDFL 844

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             + T       ++++ ++S +++        + + P   E      D V I VS A+G 
Sbjct: 845 DGLNT------NVRQMLMVSALDM------HALSDAPADAEAF---GDTVAIKVSHADGE 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T VGS   +PTLC+RC  ++
Sbjct: 890 VCARCRMVKTDVGSDDAYPTLCARCAAIV 918


>gi|421769067|ref|ZP_16205776.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
 gi|421771330|ref|ZP_16207990.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
 gi|411185463|gb|EKS52591.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
 gi|411185916|gb|EKS53042.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
          Length = 928

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 197/329 (59%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMGDWEHPYITLQHAYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       G+L++   D  L +WTTTPWT+PAN  +AVN +  
Sbjct: 199 EYHDDK-SPSIYVAFPVVDG----KGILDQ---DTSLVIWTTTPWTIPANYGIAVNPRFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  V++                       +QK V   VA++L+  +  + G  +  I KT
Sbjct: 251 YVQVQV----------------------GEQKYV---VAAELLDRVAEEVGWEQPKILKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G++++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP++
Sbjct: 286 FKGTEMDKMTAKHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGMKYGLPVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           S VD +G   E A  F G+    D N  V K LDE+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SVVDAKGYLNENAPGFEGV-FYDDANKLVTKALDEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS+E FR   + AI  V + P
Sbjct: 404 FRATTQWFASIEAFRDQILKAIDTVDFKP 432



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 35/342 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R TLR+++ N  D+  
Sbjct: 603 VPSTIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD L  +D+Y L +L  ++ N++E+Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDAVAYDQLGSVDRYLLVRLNQVIANVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW----QNLPFAYTLEDG 504
           KD +Y        RRS QTV+   LL + +++ PILPH AE+VW    Q   +A   +  
Sbjct: 723 KDVVYIEAANDPKRRSMQTVMYTALLDLTKLLTPILPHTAEEVWPYLKQKQAYAALSDMP 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
               F  E +  +LD             W   ++ R+EV K LEVAR  K+IG S+EA V
Sbjct: 783 DVTHFADEDQ--LLD------------IWAAFMDFRSEVQKALEVARDNKVIGKSMEAAV 828

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++  +      +R+M     +A+ +Q + I S  EV P     L    P + E      
Sbjct: 829 TVYPTEP-----VRDMLD-DVEANVMQ-LLITSHFEVAP-----LEAKAPENAEQF---- 872

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + + + V  A+G+ C RC    T +G   + P LCSRC  ++
Sbjct: 873 EDMAVVVEHAKGTVCPRCRMVRTDIGKDPKLPELCSRCAAIV 914


>gi|345017877|ref|YP_004820230.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|344033220|gb|AEM78946.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 205/331 (61%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+ +      GD                       I+A D++ T++ +   +   I 
Sbjct: 256 FDYALAKF-----GDEV--------------------YIMAKDMLDTVKKEANLSDYEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL 
Sbjct: 291 AVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGLE 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K P
Sbjct: 350 VLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAETRITHSYPHCWRCKSP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 409 IIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 198/327 (60%), Gaps = 24/327 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ + R +++K LE+ART K IG SLEA+V ++      + 
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDTRKDISKALEIARTDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L +     +D   L+ +FI+S+V VL      + +N   S +Y ++      I V+ A 
Sbjct: 846 ELYDFFKGFND---LEYVFIVSKV-VLHQPEEPVPQNAYESEDYNLK------IVVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 896 GEKCERCWMYSETVGTIKEHPTICARC 922


>gi|406670579|ref|ZP_11077824.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
 gi|405582095|gb|EKB56101.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
          Length = 927

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 198/334 (59%), Gaps = 37/334 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M +FKR GV  DW++PYLTL PEYEA QI VF +M+ +GYIY+G KPV WS SS ++LAE
Sbjct: 137 MKTFKRLGVSGDWDHPYLTLAPEYEAQQIRVFAKMAEKGYIYKGAKPVFWSWSSESSLAE 196

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S SIY  F++       +G+++E        +WTTTPWT+PAN A+A   
Sbjct: 197 AEVEY-QDVTSPSIYVAFKVRKG----NGVVDE---QAEFVIWTTTPWTLPANMAIAALK 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
              Y  V++                       D++    IVA +L+ ++  + G     I
Sbjct: 249 AATYVQVKV-----------------------DERH--FIVAQELLESIAKEIGWQDYSI 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +KT  G   E     HP  +R   +V  GD++T +SGTGLVHTAPGHG++DY   L+YGL
Sbjct: 284 EKTYKGEQFEGVEAQHPFYDRPSKLVF-GDHVTLDSGTGLVHTAPGHGEDDYWVGLEYGL 342

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +LSPVD +G FT EA  F GL  L  G   V++ ++E  SL+    + H YP+DWRTKK
Sbjct: 343 DVLSPVDSKGHFTNEAPGFEGLFYLK-GQKKVLEIIEENGSLLHYSEFVHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
           P I+RAT QWFAS++ FR   +D +  +VKW  P
Sbjct: 402 PVIYRATPQWFASIDKFRDELLDNVEHKVKWHHP 435



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 179/337 (53%), Gaps = 40/337 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD++RLWV++VDY  DV +  ++L+Q+S+ YRK+R T+R++LG ++D+    +++S D 
Sbjct: 614 GADIIRLWVATVDYESDVRVSNEILKQVSESYRKIRNTIRFMLGLVNDFDPNKDAVSKDK 673

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D Y     +    ++   YE Y +  +++ +  F+  DLS FY +VAKD +Y    
Sbjct: 674 LSALDAYMFANFQTFKDDLLTDYEEYHYSSLYKRVMNFVSTDLSAFYLNVAKDIVYIDSQ 733

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA---YTLEDGSAAEFVFESK 514
            SF RRS QTV+   L  ++ ++ PIL H  E+ W++LP       L+D    E +  SK
Sbjct: 734 NSFNRRSMQTVIYQVLKELLILLTPILVHTCEEAWKSLPGVEGFVQLQDMPEVEELENSK 793

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKL--IGSSLEAKVYLFTDDAS 572
              L   W      EI+F     ++++ VNK LE A+      I  S EA V ++ D   
Sbjct: 794 --SLINNW------EIFF-----KIQSGVNKGLEEAKNKDQDPIKKSFEAAVEVYLDQEQ 840

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
              +L ++       D L ++ +IS +++  L  TP+  +R   ++            + 
Sbjct: 841 -TQKLTQLT------DNLDQLLVISHLDLKDLDQTPDNALRFENFA------------VL 881

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           V RA+G  C+RC     +VGS  + P LC RCY++++
Sbjct: 882 VKRADGDICQRCRAVRPEVGSIQQAPDLCQRCYDIVS 918


>gi|119488654|ref|XP_001262777.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119410935|gb|EAW20880.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 1010

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 196/341 (57%), Gaps = 35/341 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV ADW+  + T+D E+E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKGFRSFGVMADWDGHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS +    F + S PP  +      L DL   +WTTTPWT+PANA +AV+ 
Sbjct: 207 AELEYKDDHVSTAALVKFPLASVPPQLAQDPLVQLKDLSAVIWTTTPWTLPANAVIAVHE 266

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VI 179
            L Y +V  QS   G                       +++A      LE      L VI
Sbjct: 267 SLDYMIV--QSDTHGQ----------------------LLIAQSRFEYLEHMLKEDLTVI 302

Query: 180 KKTLAGSDLENCRYVHPV----DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
             ++ GS+L       P+    D +  P +I  D++T +SG+GLVH APGHG +DY   +
Sbjct: 303 IPSIRGSELAEQTMYRPLFKSTDAKPQP-IIAADFVTADSGSGLVHCAPGHGMDDYEACV 361

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
             G+P  +PVDD G+FT++A      + SG  VLG+G  AV++Y++ Q  L+ +  YEHK
Sbjct: 362 PRGIPAFAPVDDHGRFTDKAMPSDPARLSGKSVLGEGTAAVLEYIESQGYLLAKHQYEHK 421

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWR+K P I RATEQWFA V   R +A+ A+  VK+VP
Sbjct: 422 YPYDWRSKLPIIIRATEQWFADVADIRNSAVKALEDVKFVP 462



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 19/333 (5%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+R  + + Y  L
Sbjct: 675 GPDALRMWAASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPYSQL 734

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D+ AL  L  +V   +++ E+++F+K    + R+  +  S FY +  KDRLYT G +
Sbjct: 735 QQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTYGES 794

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +  ++API P L E+ W++ P A  L+     + V  +  P +
Sbjct: 795 STSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTPEAIKLQCEHPLKRVAST--PPI 852

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDASLASRL 577
           D   R+        + +I+ + + +  + E AR  K +GSSL++ V++   +  S  S L
Sbjct: 853 DWLDRSLEAD----YQEIVGVSSVIKALQEQARGKKQLGSSLQSFVHIVLPEGNSTGSAL 908

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +   +  +D   +  + + +  E +P+    L     YS  Y +    K  + +   +  
Sbjct: 909 QRNLSELNDMFVVSSVTLGAHGEPVPAAI--LDAQWQYSDAYELPSGGKGTVYIYTPQAD 966

Query: 638 KCERCWNYSTQVGSFVEHP----TLCSRCYEVL 666
           KC RCW Y       V  P    TLC+RC +V+
Sbjct: 967 KCPRCWRY------VVPEPHADGTLCNRCEDVV 993


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7.1|SYI_THEP3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782450|sp|B0K2W1.1|SYI_THEPX RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 205/331 (61%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+ +      GD                       I+A D++ T++ +   +   I 
Sbjct: 256 FDYALAKF-----GDEV--------------------YIMAKDMLDTVKKEANLSDYEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL 
Sbjct: 291 AVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGLE 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K P
Sbjct: 350 VLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAETRITHSYPHCWRCKSP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 409 IIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 198/327 (60%), Gaps = 24/327 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++ALF+L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALFRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R +++K LE+ART K IG SLEA+V ++      + 
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDIRKDISKALEIARTDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L +     +D   L+ +FI+S+V VL        +N   S +Y ++      I V+ A 
Sbjct: 846 ELYDFFKGFND---LEYVFIVSKV-VLHQPEEPAPQNAYESDDYNLK------IVVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 896 GEKCERCWMYSETVGTIKEHPTICARC 922


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 205/331 (61%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+ +      GD                       I+A D++ T++ +   +   I 
Sbjct: 256 FDYALAKF-----GDEV--------------------YIMAKDMLDTVKKEANLSDYEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL 
Sbjct: 291 AVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGLD 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K P
Sbjct: 350 VLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAETRITHSYPHCWRCKSP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 409 IIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 198/327 (60%), Gaps = 24/327 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R  ++K LE+ART K IG SLEA+V ++      + 
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDIRKYISKALEIARTDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L +     +D   L+ +FI+S+V VL      + +N   S +Y ++      I V+ A 
Sbjct: 846 ELYDFFKGFND---LEYMFIVSKV-VLHQPEEPVPQNAYESEDYNLK------IVVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 896 GEKCERCWMYSETVGTIKEHPTICARC 922


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 205/331 (61%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 AQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N +
Sbjct: 198 EIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTTTTWTIPANLAIALNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             YA+ +      GD                       I+A D++ T++ +   +   I 
Sbjct: 256 FDYALAKF-----GDEV--------------------YIMAKDMLDTVKKEANLSDYEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
               G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAPGHG+ED++   +YGL 
Sbjct: 291 AVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAPGHGEEDFLVGQEYGLD 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E    H YP+ WR K P
Sbjct: 350 VLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAETRITHSYPHCWRCKSP 408

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 409 IIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 198/327 (60%), Gaps = 24/327 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL++L  +VK + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVKELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 515
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P + EK+    +  I  W K+ ++R +++K LE+ART K IG SLEA+V ++      + 
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDIRKDISKALEIARTDKKIGHSLEAQVDIYP-----SQ 845

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L +     +D   L+ +FI+S+V VL        +N   S +Y ++      I V+ A 
Sbjct: 846 ELYDFFKGFND---LEYVFIVSKV-VLHQPEEPAPQNAYESDDYNLK------IVVTHAP 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 896 GEKCERCWMYSETVGTIKEHPTICARC 922


>gi|255003795|ref|NP_001157270.1| isoleucyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 983

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 197/332 (59%), Gaps = 27/332 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F+R+GV ADW+N Y T D +YEAAQ++VF +M  +G IY+  KPV WSPSSRTALAEA
Sbjct: 166 AAFQRWGVMADWDNCYYTFDGKYEAAQLKVFQEMHNKGLIYQDYKPVFWSPSSRTALAEA 225

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRS+Y  F +++ P   +    E L ++   +WTT PWT+PAN AV    K
Sbjct: 226 ELEYNPEHVSRSLYITFPLLTLPAKLTAKA-EGLSNVSALIWTTQPWTIPANQAVCYMPK 284

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           +QY+VV+                       +   +  ++VA++ + +L +   T L    
Sbjct: 285 VQYSVVK-----------------------RADTEQLLLVATERINSLSSLLKTNLESLV 321

Query: 182 TLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           T AG+DLE     HP + +++ P ++   ++T   GTGLVHTAP HG +DY  +  + LP
Sbjct: 322 TFAGTDLEGGVCQHPTIPSKEVP-LLPASHVTMTKGTGLVHTAPAHGMDDYSVATHFNLP 380

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           +   VD+EG+FTE AG +     V+ +GN AV+  L    +++ EE   H YPYDWRTK+
Sbjct: 381 VECMVDEEGRFTELAGAELQNKSVMDEGNAAVISVLQAAGAVVKEEDCVHSYPYDWRTKQ 440

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P + RA+ QWF +    +  A DA+ +V+ +P
Sbjct: 441 PVVIRASRQWFINTATLKDKAKDALQKVRVIP 472



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 159/341 (46%), Gaps = 28/341 (8%)

Query: 335 APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSI 393
           +P YGADVLR WV+  +   +V IGP  L    D   KLR TL++LLGNL  +     ++
Sbjct: 657 SPPYGADVLRWWVAESNVFSEVQIGPNALNAAKDSINKLRNTLKFLLGNLQGFDPRSQAV 716

Query: 394 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
               +  IDQY L  L      + ++Y  + +  + +++Q F   +LSNFYF + KDRLY
Sbjct: 717 DPKQMHYIDQYMLHLLREFSMKVTDAYSEFNYGLVIRLLQSFTARELSNFYFSIIKDRLY 776

Query: 454 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                S  RRSCQTVL   L  + R IAP+LPHLAE+V+ + P     ++G+    +F S
Sbjct: 777 CDPEDSVGRRSCQTVLEEILDGVSRSIAPVLPHLAEEVYLHAP---GHDEGNT---LFRS 830

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            W      WR  P  E    G      + ++ +    R        +  +  LF +   L
Sbjct: 831 GWINTSPVWRK-PGLEEAVEGACAIRDSFLSSI--PGRNAAEFDLVISIEPGLFFE---L 884

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EG-----KD 625
              L+E  T+   +  L  + + S+  +  + P  L  + I  +G +L+  EG     + 
Sbjct: 885 MESLQEEPTST--SSQLTELMMTSRTTLTSALPRDLPSDAITSTGSFLINLEGGMIREES 942

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              I       S+C RC  Y++      E   LC RC  ++
Sbjct: 943 SYSIAAMPTALSRCPRCRRYTSD-----EPDCLCPRCQTMM 978


>gi|339448180|ref|ZP_08651736.1| isoleucyl-tRNA synthetase [Lactobacillus fructivorans KCTC 3543]
          Length = 933

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 199/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW+NPYLTL PEYEAA++ VFG+M+ +G IY+G KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVSADWDNPYLTLMPEYEAAEVRVFGKMADRGLIYKGLKPVIWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S +   +++      +G+L+    D  + VWTTTPWT+P +  + V     
Sbjct: 199 EYHDV-TSPSAFFAEKVIDG----NGVLDN---DTYMVVWTTTPWTIPGSEGITVEPDFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y++++                        D KK   ++ +DL+      +G K V   +T
Sbjct: 251 YSIIQHDD---------------------DPKKY--VIGTDLLDQDAEMFGWKNVRTLQT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DL+N +  HP D+ +  VV+ GD++T ++GTGLVHTAPG G++DY   ++YGL + 
Sbjct: 288 VKGKDLDNIKAQHPFDSSRQLVVMNGDFVTNDAGTGLVHTAPGFGEDDYNIGMQYGLDVF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVD +G  T+EAG  F G+    D N   +  L EQ  LI   PY+H YP+DWRTKKP 
Sbjct: 348 APVDSKGYLTKEAGPDFEGV-FYEDANQIALDKLKEQGQLIHYMPYKHSYPFDWRTKKPV 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFASV+  R+  +DAI  V + P
Sbjct: 407 IYRATPQWFASVDKIRKEILDAIDTVGFNP 436



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 175/332 (52%), Gaps = 33/332 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVD + DV +     + +SD Y+K+R T+RY+L N  D+    ++I Y+D
Sbjct: 616 GADIVRLWVTSVDTSADVRVSMGNFKVVSDSYKKIRNTIRYMLANTSDFDPESDAIKYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY L +L  +++N+++ Y+ Y F  I + +  FI  DLS FY D AKD LY    
Sbjct: 676 MNSVDQYMLIRLNQLIQNVKDDYDQYDFMSINKELLSFITSDLSAFYLDFAKDILYIDPK 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTVL   L+++ +++ PI+PH  E++W  L            EFV  ++ P 
Sbjct: 736 NGQRRRSMQTVLYTILVALTKLMTPIIPHTTEEIWSFL--------DEPEEFVQLAEMPE 787

Query: 518 LDEKWRTFPVGEIYF---WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           +    + F  GE      W + ++LR  V K +E+AR  K+IG   EAK+ L+ DDA+  
Sbjct: 788 V----KHFN-GEDTVRSQWDQFMKLRKNVLKAMELARDDKVIGKPSEAKLTLYVDDAT-K 841

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
               ++         + +I ++SQ++         I++I    +      D + I V  A
Sbjct: 842 KMFNDLNV------DIGQILMVSQLD---------IKSIDDVDDQANRFDDNLAIKVEHA 886

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G  C RC      VGS  ++P  C RC +++
Sbjct: 887 NGETCVRCRLIKQDVGSDPDYPEFCGRCAKIV 918


>gi|345329562|ref|XP_001511676.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Ornithorhynchus anatinus]
          Length = 1007

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 196/331 (59%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADW+N Y T D +YEA Q++VF QM  +G +YR  KPV WSPS+RTALAEA
Sbjct: 192 SAFIRWGVMADWDNCYYTFDGKYEARQLKVFHQMYDKGLVYRDFKPVFWSPSARTALAEA 251

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRS+Y  F +++ PP  + LL+   P + + +WTT PWT+PAN AV    K
Sbjct: 252 ELEYVPEHVSRSVYVRFPLLNPPPQLASLLDGSSP-VSVLIWTTQPWTIPANQAVCYMPK 310

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L+Y++V+  +  E                         I+ ++ V ++ A +GTK  +  
Sbjct: 311 LKYSLVKCSNSGE-----------------------LYILGAERVGSVAATFGTKFEVIS 347

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+DLE+    HP    +   ++  +++T  +GTGLVHTAP HG EDY  +  + L +
Sbjct: 348 TFVGADLESGSCAHPTIPGRVSPLLPANHVTMTAGTGLVHTAPAHGMEDYSVASDHKLSM 407

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG +     VL +G   V+K L    +L+ EE + H YPYDWRTKKP
Sbjct: 408 DCLVDENGVFTEGAGSELQNKSVLEEGTDIVIKMLQSASNLLKEEKFIHSYPYDWRTKKP 467

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA++QWF ++   +  A + + +VK++P
Sbjct: 468 VIIRASKQWFVNISDIKATAKELLKKVKFIP 498



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 167/345 (48%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   DV IG   L    +   KLR T+R+LLGNL  +     SI 
Sbjct: 684  PPYGADVLRWWVADSNVFADVTIGSASLAAAREDVNKLRNTVRFLLGNLAGFNPETESIP 743

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +++ +IDQ+ L  L++    + E+Y+ Y F K+ + +Q F   +LS FYF + KDRLY 
Sbjct: 744  TEEMYVIDQFMLHLLQDFANKVTEAYKQYDFGKVIRQLQVFQNRELSKFYFSIIKDRLYC 803

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
             G     RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LPF          + VF + 
Sbjct: 804  EGEKDPKRRSCQTVLAEILDVVVRSFAPILPHLAEEVFQHLPFE------KEPKGVFRTG 857

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 858  WCSTSPVWKK----------PGLEEAVEGACAMRDSFLGSIPGQNATQFNVVIVIEPGLL 907

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
              + E+  A+  + T  L  + + SQ  +L   P  L  ++    G +L+  EG D    
Sbjct: 908  FEIMEILQAEETSSTSQLNELMMASQTTLLAQDPIDLPADVTEVKGTFLINLEGGDIREE 967

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV I  +  E  KC RCW Y+++        T C RC EV+A
Sbjct: 968  SSYKVIIVPTTKE--KCPRCWKYTSESSE-----TPCPRCLEVIA 1005


>gi|327398468|ref|YP_004339337.1| isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 199/334 (59%), Gaps = 36/334 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ DW+NPYLT+D +YEA  +   G+   +G +Y+ KKPV+W  S +TALA AE+
Sbjct: 141 FKRLGVFGDWDNPYLTMDFKYEADTLRELGKFVEKGLVYKEKKPVYWCYSCKTALALAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWTTTPWTVPANAAVAVNAKL 122
           EY +   S SIY  F  +S   S       FL   +   +WTTTPWT+PAN AVAVN   
Sbjct: 201 EYQDDE-SESIYVRFGFISDLGSED---KRFLGKAVSAIIWTTTPWTLPANLAVAVNPNF 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            YA V+I                 P +V         +VA+DLV  L  K+  K   I K
Sbjct: 257 DYAFVQIT----------------PRHVY--------LVAADLVKGLMEKFEIKEYEIIK 292

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G++LE+    HP  +R+  +++G D++T ++GTGLVHTAPGHG EDYV   KY LPI
Sbjct: 293 TVKGAELEDYILAHPFYDRESRIILG-DHVTLDAGTGLVHTAPGHGDEDYVIGKKYHLPI 351

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVDD+G+F  E   F+G+ VL + N  +++ L ++  L+ +E   H YP+ WR K P 
Sbjct: 352 YSPVDDDGRFLPEVEYFAGMHVL-EANPKIIELLKQKEMLVKQEKITHSYPHCWRCKNPI 410

Query: 302 IFRATEQWFASVEG----FRQAAMDAIGQVKWVP 331
           IFR+TEQWF S++      R+ A++AI + KW+P
Sbjct: 411 IFRSTEQWFISIDNPKGELRKKALEAIDKTKWIP 444



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 188/339 (55%), Gaps = 30/339 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGA++LRLW S+ DY  DV +  +++R++ D YRK+R T+R+LLGNL+D+   
Sbjct: 616 PEKIIKKYGAELLRLWASATDYREDVRLSDEIMRRLVDNYRKIRNTIRFLLGNLNDFDES 675

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            ++ YD+L  ID++ L + E++ + + ++YE Y++  I++ +  + I+ LSNFY DV KD
Sbjct: 676 KALKYDELEEIDKWVLAETEHLKEKLLKAYEDYEYHVIYRNMANYCILVLSNFYLDVLKD 735

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY     S  R S QT +   L  IV  +APIL   AE+       AY+  +G+     
Sbjct: 736 RLYCEAKDSKKRLSAQTAMDEILKVIVFYMAPILSFTAEE-------AYSYMNGAKPSVH 788

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
            E ++   ++ +R   +  I  W  + +L+   +K LE+AR+ KLIG+SLEAKV +    
Sbjct: 789 ME-EFVKPNDAYRNEAL--IEKWSNLRKLKAATDKALELARSEKLIGNSLEAKVVVDIK- 844

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK---V 627
              + ++RE+       D L  I I+SQ +       G +       EYL +  D    +
Sbjct: 845 ---SDKMREVIEG-FSKDDLADICIVSQFDF------GSL------DEYLKKYYDDEAGI 888

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V +AEG KC+RCW YS  VG       +C+RCY V+
Sbjct: 889 DVYVVKAEGEKCDRCWKYSPTVGDNPAGEKVCARCYGVV 927


>gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 209/339 (61%), Gaps = 25/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           V  + W V+ E++    + E   W KI ++R + NK+LE AR G  ++IG+SL+AKV  +
Sbjct: 789 VLLTDWYVMKEEYINEEIAEK--WSKIQKVRKDANKLLEKARQGENRIIGNSLDAKVQCY 846

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T+DA L + L      +++ +TL+   I+SQVE+L       +    Y          ++
Sbjct: 847 TEDAGLKAFL------ENNHETLEAALIVSQVEILSEKTENFVAGEEYK---------EL 891

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++ V  A+G KC+RCW YST +G+  +HP LC RC  V+
Sbjct: 892 FLQVLHADGEKCDRCWKYSTNLGTKEDHPHLCPRCSSVV 930



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 191/332 (57%), Gaps = 36/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV   W +PYLTL P++EA Q+++FG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY   +  S       L  E      + +WTTTPWT+PAN A+++N    
Sbjct: 201 EYHD-HTSPSIYVRMKANSDLLEKISLTEEAY----VVIWTTTPWTLPANVAISLNPDFD 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIKKT 182
           Y V                 K+  GN         +I+  DL  T  A+ G +   + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILGKDLAETAFAEMGIENPELVKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS LE   Y HP  +R   +++ G ++T ++GTG VHTAPGHGQEDYV   +Y +PI+
Sbjct: 291 FKGSTLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIV 349

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           SP++ +G  TEEAG  F+GL      N A++ +L E   L+  +   H YP+DWR+K P 
Sbjct: 350 SPINYKGYLTEEAGPLFAGL-FYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPV 408

Query: 302 IFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           IFRATEQWF   EG   R+ A+ A+  V+++P
Sbjct: 409 IFRATEQWFVKAEGSDLREKALRALDDVEFIP 440


>gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 209/339 (61%), Gaps = 25/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           V  + W V+ E++    + E   W KI ++R + NK+LE AR G  ++IG+SL+AKV  +
Sbjct: 789 VLLTDWYVMKEEYINEEIAEK--WSKIQKVRKDANKLLEKARQGENRIIGNSLDAKVQCY 846

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T+DA L + L      +++ +TL+   I+SQVE+L       +    Y          ++
Sbjct: 847 TEDAGLKAFL------ENNHETLEAALIVSQVEILSEKTENFVAGEEYK---------EL 891

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++ V  A+G KC+RCW YST +G+  +HP LC RC  V+
Sbjct: 892 FLQVLHADGEKCDRCWKYSTNLGTKEDHPHLCPRCSSVV 930



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 191/332 (57%), Gaps = 36/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV   W +PYLTL P++EA Q+++FG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY   +  S       L  E      + +WTTTPWT+PAN A+++N    
Sbjct: 201 EYHD-HTSPSIYVRMKANSDLLEKISLSEEAY----VVIWTTTPWTLPANVAISLNPDFD 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIKKT 182
           Y V                 K+  GN         +I+  DL  T  A+ G +   + K 
Sbjct: 256 YGVY----------------KTEKGN---------LILGKDLADTAFAEMGIENPELVKE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS LE   Y HP  +R   +++ G ++T ++GTG VHTAPGHGQEDYV   +Y +PI+
Sbjct: 291 FKGSTLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIV 349

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           SP++ +G  TEEAG  F+GL      N A++ +L E   L+  +   H YP+DWR+K P 
Sbjct: 350 SPINYKGYLTEEAGPLFAGL-FYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPV 408

Query: 302 IFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           IFRATEQWF   EG   R+ A+ A+  V+++P
Sbjct: 409 IFRATEQWFVKAEGSDLREKALRALDDVEFIP 440


>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 167/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        + D  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NVDVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 167/335 (49%), Gaps = 40/335 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
               RRS QTV+   L+ + +++ PILPH  E++W  L     F    +      F  E+
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTDMPEVQHFANEN 792

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDA 571
              V+   W+ F           + LR++V K LE AR  K+IG S EA V L+   D A
Sbjct: 793 ---VILSNWKRF-----------MTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTA 838

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            L   L        +AD  Q I I+S + +   T   + +N+    E+   G     I V
Sbjct: 839 ELLESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVV 879

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             A+G  C RC   +           LCSRC +++
Sbjct: 880 EHAQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|325911859|ref|ZP_08174263.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476365|gb|EGC79527.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +V+ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKVLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 202/332 (60%), Gaps = 38/332 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEA
Sbjct: 137 GQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F++           N    D  + +WTTTPWT+PAN  ++++  
Sbjct: 197 EIEYKDKR-SPSIYVAFKVKDGK-------NVLDQDTHIVIWTTTPWTIPANLGISIHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
           L Y+VVE            AN K               +VA DL+ ++  E +W    V+
Sbjct: 249 LTYSVVE------------ANSKK-------------FMVAEDLLASVAKEFEWEDYKVV 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +++ G+DLEN    HP+  R   V++ G+++TT++GTG VHTAPGHG++D+   +KYGL
Sbjct: 284 -QSVKGTDLENVVAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFHVGMKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVDD+G  T EA  F GL      N  + + L+E  +L+      H YP+DWRTKK
Sbjct: 342 DVLCPVDDKGNMTSEAPGFEGL-FYDAANKPITEKLEEAGALLKLTFITHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS++ FR   ++A+ +  W P
Sbjct: 401 PVIFRATAQWFASIKDFRNELLEAVKETNWYP 432



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 205/362 (56%), Gaps = 39/362 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 TLDGEGRKMSKSIGNVV-VPAKVMNQLGADILRLWVASVDYQADVRVSDAILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +S+S+++L  +DQ+ L +L  ++KN+RESY+ Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLDDFNPATDSVSFENLREVDQFMLVKLNKLIKNVRESYDRYEFASIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +DLS FY D AKD LY     +  RR+ QTVL   L+++ +++APIL H +++
Sbjct: 705 AVNNFCTLDLSAFYLDFAKDVLYIEAKDNAERRAIQTVLYESLIALTKLVAPILSHTSDE 764

Query: 491 VWQNLP----FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW  +P     +  L D    + +  +K   L+EKW  F           ++LR +V K 
Sbjct: 765 VWSFIPNVKEVSVQLTDMPEYQELPNAK--QLEEKWTAF-----------MKLRNDVLKA 811

Query: 547 LEVARTGKLIGSSLEAKVYLFTDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPS 604
           LE AR  K+IG SL AKV L+ +D   SL   ++E          LQ+IFI+S  EV  S
Sbjct: 812 LEEARNEKVIGKSLTAKVTLYVNDQAKSLLDSIQE---------NLQQIFIVSGFEVAGS 862

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
             +     + +    +V         VS+AEG  C+RCW  + +VG    + TLC RC E
Sbjct: 863 LSDAPENAVKFENTAIV---------VSKAEGETCDRCWTVTPEVGQTEGYDTLCPRCAE 913

Query: 665 VL 666
           V+
Sbjct: 914 VV 915


>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 40/335 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
               RRS QTV+   L+ + +++ PILPH  E++W  L     F    +      F  E+
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTDMPEVQHFANEN 792

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDA 571
              V+   W+ F           + LR++V K LE AR  K+IG S EA V L+   D A
Sbjct: 793 ---VILSNWKRF-----------MTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTA 838

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            L   L        + D  Q I I+S + +   T   + +N+    E+   G     I V
Sbjct: 839 ELLESL--------NVDVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVV 879

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             A+G  C RC   +           LCSRC +++
Sbjct: 880 EHAQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|347549417|ref|YP_004855745.1| putative isoleucyl-tRNA synthetase [Listeria ivanovii subsp.
           ivanovii PAM 55]
 gi|346982488|emb|CBW86486.1| Putative isoleucyl-tRNA synthetase [Listeria ivanovii subsp.
           ivanovii PAM 55]
          Length = 921

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 201/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+T+ PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGISGDWENPYITMLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L    P   + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVAFKVTDG----KGVLE---PGTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +  V+ KT
Sbjct: 251 YVVLE-----------SAGEK--------------YVVAEALLPSLREKLGFEDAVVLKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYNLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FT+EA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTDEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   ++A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    NS+SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNSVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L       +   AE +     P 
Sbjct: 732 DSPDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSL-------NSEGAESIHLQDLPE 784

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  V     W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 785 VKVLAGSEEV--TVKWDAFMQIRDHVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----LKANQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG+   HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGADPNHPTLCGRCADIV 915


>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 928

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 203/330 (61%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++        LL+    +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYNVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTDDFCKNGSLSNLCSRCADIV 914


>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 920

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 194/331 (58%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV  DW NPY+TL P YEA QIEVFG+M+ +GYIY+G KPV+WSPSS ++LAEA
Sbjct: 137 SQFKRIGVRGDWENPYVTLKPAYEARQIEVFGKMANKGYIYKGLKPVYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L E        +WTTTPWT+PAN  ++V+AK
Sbjct: 197 EIEYHDKK-SPSIYVSFPVTDG----KGVLAE---GTNFIIWTTTPWTIPANLGISVHAK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
           L YA V +                              IVA +L+  +  + G T   + 
Sbjct: 249 LDYAEVSVNGSQ-------------------------YIVAQELLKEVSEELGWTDAEVV 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + + G +LEN    HP+ +R   V++ G+++TT+SGTG VHTAPGHG++D++   KYGL 
Sbjct: 284 RVIKGEELENILTKHPLYDRTSLVML-GEHVTTDSGTGCVHTAPGHGEDDFLIGKKYGLD 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD+ G  T EA  F G +     N ++ + LD+  +L       H YP+DWRTKKP
Sbjct: 343 VLCPVDERGVMTAEAPGFEG-EFYDKANKSITEALDKVGALEKLTFITHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RAT QWF S+E FR   ++AI +  + P
Sbjct: 402 VIYRATAQWFVSIEAFRDQILNAIKETSFTP 432



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 205/361 (56%), Gaps = 31/361 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDYT DV +  +  +Q+S++YR
Sbjct: 586 TLDGNGRKMSKSLGNV-IVPSKVMNQMGADILRLWVASVDYTADVRVSDENFKQVSEVYR 644

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R TL++L GNL D+    + ++++D+  +DQY   +L+ +V+ +R+ YE+Y+F  I+ 
Sbjct: 645 KIRNTLKFLHGNLADFNEQEHRVAFEDMREMDQYMAMKLQKMVETVRKGYETYEFSTIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  +   DLS+FY DVAKD +Y        RR+ QTV+   L++I+++ API+PH A++
Sbjct: 705 ALNNYCANDLSSFYLDVAKDVVYIESADHPHRRAMQTVMFDSLMAILKLAAPIIPHTADE 764

Query: 491 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 548
           +W  L F    +++     E V    +  L++KW  F           +++R +V K LE
Sbjct: 765 LWSYLSFVEEESVQLTDFPEAVLNPAFEGLNDKWSRF-----------MDIRDDVLKALE 813

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            AR  K IG SLEAKV +F D+  LA+ L     A  D + L ++FI+S+ E       G
Sbjct: 814 EARAAKTIGKSLEAKVTVFGDE-ELATLL-----ASTD-ENLAQLFIVSKYEY-----GG 861

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
                P     L E    V + V +A G KCERCW  S ++G   EHPTLC RC  V+  
Sbjct: 862 TQDQAPEHAVKLNE----VSVTVEKATGEKCERCWTISEEIGQSEEHPTLCPRCASVVET 917

Query: 669 Q 669
           Q
Sbjct: 918 Q 918


>gi|423332887|ref|ZP_17310669.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
 gi|337728005|emb|CCC03094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
          Length = 931

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/332 (43%), Positives = 204/332 (61%), Gaps = 35/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEA
Sbjct: 137 TDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  V+++ + V ++        G L+    D  L VWTTTPWTVPA+ AVAVN K
Sbjct: 197 EVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWTTTPWTVPASEAVAVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y+VV+           PAN          D +K   +VA+DL+  L  K G     + 
Sbjct: 249 FDYSVVK-----------PAN----------DDRK--FVVATDLLEKLAEKLGWEDYEVV 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L G + E     HP  +R   V +  DY+T ++GTGLVHTAPG+G +DY    KY LP
Sbjct: 286 DHLMGQEFEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTAPGYGDDDYNFGKKYDLP 344

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+++EP +H YP+DWRTK+
Sbjct: 345 IFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALLLQEPLQHSYPFDWRTKQ 403

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT+QWF S+E  RQ  ++A+  VK+ P
Sbjct: 404 PIIFRATDQWFVSIEKMRQNILNALEDVKYHP 435



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 172/333 (51%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYGK 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH  E+VW  L            +FV  ++ P 
Sbjct: 735 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYL--------NEPEDFVQLTEIP- 785

Query: 518 LDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV--YLFTDDASL 573
                RTF   E  +  W   +E+R+ V K LE AR  KLIG SLEA+V  YL  D   L
Sbjct: 786 ---DPRTFAGEEELLSKWDDFMEVRSHVLKSLEEARNAKLIGKSLEAQVDLYLTDDQKQL 842

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L E          +Q +  +S + V  +         P   +   +G   V + V+ 
Sbjct: 843 LDSLNE---------NIQLLLGVSALHVHSAD------KAPADADQYNDG---VAVKVTT 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C RC      VGS   +P LC+RC  ++
Sbjct: 885 ANGETCARCRMVKEDVGSDPAYPELCARCAAIV 917


>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|386050994|ref|YP_005968985.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|404284516|ref|YP_006685413.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
 gi|405759070|ref|YP_006688346.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
 gi|81508283|sp|Q8Y5N8.1|SYI_LISMO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|346424840|gb|AEO26365.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|404234018|emb|CBY55421.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
 gi|404236952|emb|CBY58354.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
          Length = 921

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLANSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|386047671|ref|YP_005966003.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 1/2a
           str. F6854]
 gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|345534662|gb|AEO04103.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
          Length = 921

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 194/337 (57%), Gaps = 42/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
            S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D    + + +S
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADS 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +   +  KW  F           +++R  V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 792 E--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD---- 834

Query: 574 ASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                    AK   D+L+    ++FI+S  E++       + N P S        ++V +
Sbjct: 835 -------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAV 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ AEG  CERC      VG    HPTLC RC +++
Sbjct: 879 QITVAEGETCERCRVVKKDVGVNPNHPTLCGRCADIV 915


>gi|404414097|ref|YP_006699684.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
 gi|404239796|emb|CBY61197.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
          Length = 921

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLANSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|423098920|ref|ZP_17086628.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
 gi|370794747|gb|EHN62510.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
          Length = 921

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|392949179|ref|ZP_10314770.1| Isoleucyl-tRNA synthetase [Lactobacillus pentosus KCA1]
 gi|392435594|gb|EIW13527.1| Isoleucyl-tRNA synthetase [Lactobacillus pentosus KCA1]
          Length = 932

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 199/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG    +  IYRGKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFVKRHLIYRGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   R++       G+L++   +  + VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDVTSPSAFYGE-RVIDG----KGVLDD---NTYMVVWTTTPWTIPASEGITVDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGESRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G+DLEN    HP D+ +  + + GD++T +SGTGLVHTAPG+G++DY    KYGLPI 
Sbjct: 288 VKGADLENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTAPGYGEDDYQIGQKYGLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVD++G  TEE+G  F+G+    D N   +  L +   L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDNKGVLTEESGADFAGV-FYDDANKISLDKLKDAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + +I  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSIDDVQFFP 436



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 183/329 (55%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLTEMPT 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +     W + ++LR++V K LE AR  KLIG SLEA + L+  DA   + L
Sbjct: 788 VQNYANSDELTAQ--WSRFMDLRSDVLKALEEARDAKLIGKSLEAHLDLYV-DADTQAFL 844

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             + T       ++++ ++S +++        + + P   E      D V I VS A+G 
Sbjct: 845 DGLNT------NVRQMLMVSALDM------HALSDAPADAEAF---GDTVAIKVSHADGE 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T VGS   +PTLC+RC  ++
Sbjct: 890 VCARCRMVKTDVGSDDAYPTLCARCAAIV 918


>gi|386044326|ref|YP_005963131.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|404411320|ref|YP_006696908.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
 gi|345537560|gb|AEO07000.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|404231146|emb|CBY52550.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
          Length = 921

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDTFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|422810097|ref|ZP_16858508.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
 gi|378751761|gb|EHY62349.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 921

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 201/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L++    HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDSVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 42/346 (12%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+  
Sbjct: 603 LPSKVIKQLGADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++SY++L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D A
Sbjct: 663 TTNTVSYENLREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDG 504
           KD +Y     S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D 
Sbjct: 723 KDVVYIEAADSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDL 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
              + + +S+   +  KW  F           +++R  V K LE AR  KLIG S+ AKV
Sbjct: 783 PEVKVLADSE--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKV 829

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYL 620
            L+ D             AK   D+L+    ++FI+S  E++       + N P S    
Sbjct: 830 TLYVD-----------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----VENAPESA--- 870

Query: 621 VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               ++V + ++ AEG  CERC      VG   +HPTLC RC +++
Sbjct: 871 -FKSNQVAVQITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|422413560|ref|ZP_16490519.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
 gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|420175038|ref|ZP_14681483.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
 gi|394244324|gb|EJD89669.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM061]
          Length = 916

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 190/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+ NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFINPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 916

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 190/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+ NPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFINPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 PVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526006|sp|Q929Z6.1|SYI_LISIN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPNLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTERLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLANSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|420177416|ref|ZP_14683752.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
 gi|420179258|ref|ZP_14685553.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
 gi|394247800|gb|EJD93042.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM057]
 gi|394254064|gb|EJD99046.1| isoleucine--tRNA ligase [Staphylococcus epidermidis NIHLM053]
          Length = 916

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 190/325 (58%), Gaps = 38/325 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GKKPV+WSPSS ++LAEAE
Sbjct: 138 DFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKPVYWSPSSESSLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +  +             D    +WTTTPWT+P+N A+ V+ +L
Sbjct: 198 IEYHDKR-SASIYVAFDVKDSKGKVDS-------DAQFIIWTTTPWTIPSNVAITVHPEL 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG---TKLVI 179
           +Y     Q  ++G                        IVA  L   +    G     + +
Sbjct: 250 KYG----QYNVDGHK---------------------YIVAQALSEEVAEALGWDKDSIQL 284

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           +K   G +LE     HP  +R   +VI G+++TT++GTG VHTAPGHG++DY+   KY L
Sbjct: 285 EKEFTGKELEFVEAQHPFLDR-VSLVINGEHVTTDAGTGCVHTAPGHGEDDYIVGQKYDL 343

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            ++SP++D+G FTEE G F G+      N AV   L E+ +L+  +   H YP+DWRTKK
Sbjct: 344 LVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLKEKDALLKLDFITHSYPHDWRTKK 402

Query: 300 PTIFRATEQWFASVEGFRQAAMDAI 324
           P IFRAT QWFAS+   RQ  +DAI
Sbjct: 403 PVIFRATPQWFASINKVRQDILDAI 427



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/380 (38%), Positives = 211/380 (55%), Gaps = 50/380 (13%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 355
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLSD 630

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 414
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSIAETNLLEVDRYLLNRLREFTA 690

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP-VLD------EKWRTFPV 527
            + +++APIL H AE+VW + P           E V  S  P V+D      EKW TF  
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHV-------KEESVHLSDMPKVVDVDEELLEKWNTF-- 801

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRLREMCTAKHD 586
                    + LR +VN+ LE AR  K+IG SLEAKV + ++++ + A  L++       
Sbjct: 802 ---------MNLRDDVNRALEQARNEKVIGKSLEAKVVIGSNESFNTAEFLQQF------ 846

Query: 587 ADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYS 646
            + LQ++FI+SQVEV     +G+      S +Y   G     I +  AEG KCERCWNY+
Sbjct: 847 -NDLQQLFIVSQVEVKDKVNDGV------SYQY---GD----IHIKHAEGEKCERCWNYT 892

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
            ++GS  E   LC RC EV+
Sbjct: 893 EELGSVGELEHLCPRCQEVV 912


>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPNLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D++   N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFQPTVNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW NL        G   E +     P 
Sbjct: 732 DSRDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNNLI-------GEGVESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVDPKHPTLCGRCADIV 915


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 42/336 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLAVWTTTPWTVPANAAVAV 118
           +EY E   + SIY  F ++       GL +  LP     + + +WTTT WT+P N A+A+
Sbjct: 199 IEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIRDKKVYIVIWTTTTWTLPGNLAIAL 252

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA   Y++++I                  GN +       ++VAS+LV  +      K+ 
Sbjct: 253 NADFDYSLIDI------------------GNEI-------LVVASELVERVMK--TNKIE 285

Query: 179 IKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
             K +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    
Sbjct: 286 QYKEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQ 344

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           KY +P++ PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ W
Sbjct: 345 KYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEASGHLLGVEKITHQYPHCW 403

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFASV+GFR  A+ A+  VKWVP
Sbjct: 404 RCKNPVIFRATEQWFASVKGFRDQALKAVDDVKWVP 439



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 202/331 (61%), Gaps = 34/331 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+ F    ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTKLIAPILSFTAEEIWQNIIFKE--ED---AESVFLTSWP 793

Query: 517 VLDEK-WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            ++E   R   + E   W KI+E++  V+K LE+AR  KLIGSSL++KV +F     +  
Sbjct: 794 SINEDILRDEALREK--WDKIIEIKDIVSKQLEIARNEKLIGSSLDSKVKIFA-KGDIKR 850

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            + E      + D +Q + I+SQ+EV  S           SG+  VE        V +A+
Sbjct: 851 FIEE------NKDIIQEVLIVSQLEVEESD----------SGQIKVE--------VYKAD 886

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           GSKCERCW + T VG   E   +C RCYEV+
Sbjct: 887 GSKCERCWKFDTMVGKNEESLNVCPRCYEVV 917


>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|386008785|ref|YP_005927063.1| ileS [Listeria monocytogenes L99]
 gi|386027394|ref|YP_005948170.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
 gi|254782418|sp|B8DBR2.1|SYI_LISMH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
 gi|336023975|gb|AEH93112.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 195/337 (57%), Gaps = 42/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
            S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D    + + +S
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADS 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +   +  KW  F           +++R  V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 792 E--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD---- 834

Query: 574 ASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                    AK   D+L+    ++FI+S  E++       + N P S        ++V +
Sbjct: 835 -------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAV 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ AEG  CERC      VG   +HPTLC RC +++
Sbjct: 879 QITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|296424632|ref|XP_002841851.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638101|emb|CAZ86042.1| unnamed protein product [Tuber melanosporum]
          Length = 956

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 203/339 (59%), Gaps = 34/339 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA F+ +GV  DW+N + T+D +YE +Q+ VF +M  +G +YR  KPV WSPSS TALAE
Sbjct: 125 MAEFRSWGVMGDWDNHWRTMDKDYEISQLRVFKEMLKRGLLYRRFKPVFWSPSSGTALAE 184

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL--AVWTTTPWTVPANAAVAV 118
           AELEY E HVSR+ +  F +    P+ S  L   L  + +  AVWTTTPWT+PAN A+A+
Sbjct: 185 AELEYNEKHVSRAAFVAFPI---RPTASPGLGTRLDGISVRAAVWTTTPWTIPANKAIAI 241

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA+++Y VV+ ++   G     + +    G  + +Q KV I                   
Sbjct: 242 NAEIEYCVVDTEN--HGKLLVASGRVGELGKGINEQPKVII------------------- 280

Query: 179 IKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
               + G +L   +Y+HP+  ++ Q   ++ GD++T +SGTGLVH APGHG +DY+   K
Sbjct: 281 --DGILGQNLVGAQYLHPLLREDAQLQPILPGDFVTADSGTGLVHCAPGHGMDDYLLCRK 338

Query: 237 YGLPILSPVDDEGKFTEEA---GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP-YEHKYP 292
           + +   SPVD++G+FTE+A       G++VL  G   +++ L E  +L+  +P + HKYP
Sbjct: 339 HDIEPFSPVDNDGRFTEDALPGYGLEGMEVLFGGTKKILQILMESKALLALQPRFTHKYP 398

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTK+P I RAT QWFA V+  +   +D++  V +VP
Sbjct: 399 YDWRTKRPVIVRATAQWFADVDVIKDVCVDSLKNVVFVP 437



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 174/348 (50%), Gaps = 27/348 (7%)

Query: 322 DAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           + +  V  + P+     G D LRLWV+S DYT DV IG  +L  +++  RKLR TLR+LL
Sbjct: 612 NTMAPVDVIQPKGKSIGGIDALRLWVASCDYTKDVSIGSTILDGVNENLRKLRVTLRFLL 671

Query: 382 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
           GNL DW  G  + Y DL   D+YAL QL  + + I E+Y++  F ++ QII  +   DLS
Sbjct: 672 GNLEDWD-GKEVDYFDLTKTDKYALAQLYQVNRAIAETYKNMHFNRVIQIIMSYTNTDLS 730

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 501
            FY DV KD +Y+    S  RR  QTV+   L + + ++ PI+P L ++VW +     T 
Sbjct: 731 AFYLDVTKDSMYSDPKDSQRRRGIQTVIYHILRNYLSILTPIVPLLTQEVWSHATSFVTK 790

Query: 502 EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
                A+      W    E W    + E +    I  + + V + +E AR  + +  +LE
Sbjct: 791 GATGPAQL----GWYKPVETWNDENLIEEF--KHINAIHSLVKRGIEKARVEQGVKVNLE 844

Query: 562 AKVYLFTDDASLASRLREMCTAKH---DADTLQRIFIISQV---EVLPSTPNGLIRNIPY 615
           A   L T + S A +L E    +H     + L  IFI+S V   E +P++P         
Sbjct: 845 ASAVLVTSEGSKARKLLEK-YGEHIIPGTNELPHIFIVSAVSLGEAIPTSPTW------K 897

Query: 616 SGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHP-TLCSRC 662
             E      D   + V RA G+KC RCW Y++      E+P  +C RC
Sbjct: 898 HAERTNLLGDDCTVVVQRALGNKCPRCWVYTS------ENPDEICDRC 939


>gi|377831352|ref|ZP_09814329.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
 gi|377554779|gb|EHT16481.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
          Length = 931

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 205/331 (61%), Gaps = 35/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTL  E+EA QI+VFG  + +G +Y+ KKPV+WS SS +ALAEAE
Sbjct: 138 DFKRLGVSGEWDNPYLTLAKEFEAQQIKVFGAFAKKGLLYQAKKPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +  V+++ Y   +++       G L+    D  L  WTTTPWT+PA+ AVAVN K+
Sbjct: 198 VEYHDV-VAKTAYFCEQVIDG----KGRLDN---DTYLVGWTTTPWTIPASEAVAVNPKI 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+           PAN          D +K   ++A +LV     K+G  +  +  
Sbjct: 250 IYAVVK-----------PAN----------DDRK--FVIADELVAKCAEKFGWDEYEVVD 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L+G D++     HP ++++  +V+ GD++T E+GTGLVHTAPG+G +DY    KYGLPI
Sbjct: 287 RLSGQDMDRMTSKHPYNDKEM-LVVNGDHVTLEAGTGLVHTAPGYGDDDYQVGKKYGLPI 345

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +P++D+G  T E G +F G+    D +   +  L +  +L+ +EP EH YP+DWRTKKP
Sbjct: 346 FAPMNDQGVLTAENGPEFDGV-FYQDADDISLDLLKKHHALLKQEPLEHSYPFDWRTKKP 404

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            +FRAT+QWF S++  R   ++A+ +VK+ P
Sbjct: 405 IVFRATDQWFVSIDKMRDEILNAVDEVKYYP 435



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 175/339 (51%), Gaps = 31/339 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +     GA+++RLWV S D + DV +     +Q+SD YRKLR T R+LL N  D+   
Sbjct: 607 PNKVVKQMGAEIIRLWVMSADTSADVRVSMDTFKQISDAYRKLRNTFRFLLANTADFDAN 666

Query: 391 N-SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
           + ++SY+ L  +DQY + +L   +K +R+ ++ Y F   ++ +  F+  DLS FY +VAK
Sbjct: 667 DDTVSYEKLESVDQYMVVKLNRFLKEMRDLFDEYDFMTAYKKLINFVNNDLSAFYMNVAK 726

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     S  RRS QTV    L+++V+++ PILPH  E+VW+ +            +F
Sbjct: 727 DVLYVEAKDSHARRSMQTVFYDILVTLVKLLTPILPHTTEEVWEYM--------DEPEQF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  ++ P    + RT+   E  +  W   +E+R+ V K LE AR  KLIG SLEA+  L+
Sbjct: 779 VQLTEIP----EPRTYANEEELLNKWDDFMEIRSHVLKALEEARDAKLIGKSLEAQADLY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D    S+   + +   DA  L   F +S + V  +         P   E      D V
Sbjct: 835 LTD----SQKTLLDSMNADAGLL---FGVSALHVHDAD------QAPADAEKF---NDNV 878

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + VS A G  C+RC      VG    +P LC+RC +++
Sbjct: 879 AVKVSVAAGETCQRCRMVKEDVGEDAVYPMLCARCAKLV 917


>gi|429204843|ref|ZP_19196124.1| isoleucyl-tRNA ligase [Lactobacillus saerimneri 30a]
 gi|428146705|gb|EKW98940.1| isoleucyl-tRNA ligase [Lactobacillus saerimneri 30a]
          Length = 931

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 200/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW++PY+TLDP+YEA QI VFG+M+ +G IY+GKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVSADWDHPYVTLDPQYEAQQIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S +   +++       G+L+    D  L VWTTTPWT+P +  V ++AK  
Sbjct: 199 EYHDV-TSPSAFFAEKVIDG----KGVLDN---DTYLVVWTTTPWTIPGSEGVTIDAKFN 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV+           PAN          D +K   ++A++LV      +G       K 
Sbjct: 251 YSVVK-----------PAN----------DDRK--FVIATELVAKDAELFGWEDYETVKV 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LE  +  HP    +  +V+ GD++T E+GTGLVHTAPG G++D+    +YGLPI 
Sbjct: 288 VKGEELELVKTQHPFYPEKELIVMLGDFVTLEAGTGLVHTAPGFGEDDFNVGKQYGLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PV+D+G  T+EAG  F+G+    D N   +  L +   LI +  Y H YP+DWRTKKP 
Sbjct: 348 VPVNDQGYLTDEAGADFAGV-FYEDANDIALDKLSKAGLLIKQMEYNHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  RQ  +DAI  VK+ P
Sbjct: 407 IFRATPQWFASVDKIRQDILDAISGVKFHP 436



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 178/338 (52%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+S+ YRK+R TLR+LL N  D+  
Sbjct: 607 VPEKVIKQMGAEIIRLWVLSVDTSADVRVSMGSFQQISESYRKVRNTLRFLLANTADFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +++ DL  ID+Y L +  +  K I + Y +Y F  I++    FII DLS FY +VA
Sbjct: 667 QADRVAFADLESIDKYMLVKANHFTKEILDDYANYAFMDIYKKTMNFIISDLSAFYMNVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E+VW+ L          A E
Sbjct: 727 KDVVYIEAADSAKRRSMQTVLYDIAVRLTKLLTPVLPHTTEEVWEYLK--------EAEE 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           + + S+ P ++       + E   W + + +R++V K LE AR  K+IG S EA V L+ 
Sbjct: 779 YAYLSEMPAVEHYDEEQAILE--NWARFMNVRSDVYKALEDARNAKVIGKSFEAAVKLYV 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
               +   L  +     DAD  Q + I+SQ+EVLP         +  + +      D V 
Sbjct: 837 -APGVQKDLESL-----DADVRQAL-IVSQLEVLP---------LDQADDTATRFGDDVA 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V+ A G  C+RC   +  VG+   +PTLC+ C  ++
Sbjct: 881 VTVAHAAGEVCDRCRRITQDVGADEVYPTLCANCAHIV 918


>gi|325190727|emb|CCA25221.1| isoleucyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 963

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 206/332 (62%), Gaps = 40/332 (12%)

Query: 4   FKRYGVWADW-NNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           F+R+GV ADW ++ Y T+DP+YE  Q ++  +M +Q  IYRG KPV+WSPSS+TALAE+E
Sbjct: 124 FRRWGVLADWESHTYTTMDPQYEVRQYDILKEMLMQDRIYRGFKPVYWSPSSKTALAESE 183

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPST-SGLLNEF-LPDLGLAVWTTTPWTVPANAAVAVNA 120
           LEY + H S++ Y +F +V A  S    LL +F    +   VWTTTPWT+P+N A+ V+ 
Sbjct: 184 LEYFD-HTSQAAYILFPLVEAHSSAFKALLKQFQYEQVACVVWTTTPWTIPSNVALCVDP 242

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT----LEAKWGTK 176
           KL+Y++V++                          + ++++A DLV +    L+   G++
Sbjct: 243 KLRYSLVKLH-------------------------EKYLLMAEDLVDSFLDVLDRPLGSQ 277

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           +V   T+ GSDL   ++  P+  +   V+I G ++TT+ GTG+VH APGHGQEDY+  ++
Sbjct: 278 VV--ATMRGSDLIASKFQQPL-GKNVSVMIPGKHVTTDLGTGIVHIAPGHGQEDYIAWME 334

Query: 237 YGL---PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           +      IL PV+++G+FT EAG +  GL+VL +GN  V++ L+    L+   PY+H+YP
Sbjct: 335 HQQGTSDILCPVNEDGRFTAEAGPELEGLEVLSEGNTKVLELLENHNQLVKVSPYKHRYP 394

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 324
           YDWRTKKP I RAT QWFA +E     A+  +
Sbjct: 395 YDWRTKKPVILRATAQWFAKLEELHTIALQCL 426



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 178/340 (52%), Gaps = 22/340 (6%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q  P YGADV+R WV++ DYT DV IGP +++++S+  RK+R T R+LLGNL D+    +
Sbjct: 621 QGMPAYGADVIRYWVATTDYTSDVSIGPGIVQKVSEAVRKVRNTARFLLGNLADFHPEKD 680

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           SI Y  +  ID+Y L  L+ +  +   +Y+S+ F ++ QI+  F   DLS FY +  KDR
Sbjct: 681 SIPYASMQSIDKYMLHVLDQVNTSCTAAYDSFAFQRVQQILTNFTASDLSAFYMEACKDR 740

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS-AAEFV 510
           LY     S  RRSCQTVL   L S+   IAP+L H AED+W +    Y   D S   E V
Sbjct: 741 LYCDPAASQRRRSCQTVLHHTLRSLTWSIAPVLCHTAEDIWMHQMAQYQQCDPSDVVESV 800

Query: 511 F--ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           F  E  W      W    + +   W  + ++R +VN+V E  R G  I +  E  + LFT
Sbjct: 801 FTQEETWHAQPPSWTNASLAD--SWACLRDIRAQVNRVAEKLRHGNDIRNQQECTLELFT 858

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP--NGLIRNIPYSGEYLVEGKDK 626
           +D  L + L E+  ++ D   L+ +F+ S V VL S    +G   ++   G  L      
Sbjct: 859 EDPRLHTLLNEL--SEEDPAVLEDVFLCSNV-VLTSKAQVDGTWSSVNADGMNL------ 909

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +   +  KC RCW ++      ++   LCSRC  ++
Sbjct: 910 -HFRMEPPKAGKCVRCWKFAVH----LKDQALCSRCESII 944


>gi|260891264|ref|ZP_05902527.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859291|gb|EEX73791.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 930

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 198/331 (59%), Gaps = 37/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  +W+NPY+TL PEYEA Q++VF ++   GY+Y+G KPV+WSP++ TALAEAE+
Sbjct: 148 FKRLGILGNWDNPYITLMPEYEAEQLKVFKEIYENGYVYKGLKPVYWSPTTETALAEAEI 207

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY +   S SIY  F        T  LL++  + +  + +WTTTPWT+PAN  V ++ + 
Sbjct: 208 EYKDVE-SHSIYVKFE------GTQDLLDKLGVEEASILIWTTTPWTLPANLGVFLHPEF 260

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y +                 K+  GN         +++A +L  T+    G    + K 
Sbjct: 261 DYGLY----------------KTEKGN---------LVLAKELAETVFNTLGISYELLKE 295

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G++LE   Y HP  +R+  V++ GDY+T ++GTG VH+APGHG +DY  S KY L +L
Sbjct: 296 FKGTELEKTHYRHPFLDREGLVML-GDYVTADAGTGAVHSAPGHGADDYNYSRKYELGVL 354

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVDD G  T+EAGK+ G+      NV +V+ L E   L+    + H YP+DWR+KKP I
Sbjct: 355 SPVDDRGHMTKEAGKYEGMFYAKASNV-IVQDLTESGHLLHHSKFVHSYPHDWRSKKPVI 413

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           FRATEQWF SV+    R+ A+ A+  V++VP
Sbjct: 414 FRATEQWFISVDESDIRENAIKALDDVEFVP 444



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 192/341 (56%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 616 LPKDITEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 675

Query: 390 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            N  + Y+D+  ID++A+ +LE +     E Y+ Y+F+ +FQ I  F  +++S+FY D+ 
Sbjct: 676 ANDKVDYNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIV 735

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY  GTTS  RRS QTVL+  L  +VR+IAP+L   A+++W+ +P     E     E
Sbjct: 736 KDRLYCEGTTSIERRSTQTVLTEVLKVLVRIIAPVLSFTADEIWERIP-----ETLKEEE 790

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-- 566
            V  SKW     ++    + +   W KI  LR EVNK LE  R   LIG SL+A+V L  
Sbjct: 791 SVHLSKWIEAKPEYLNKELAQK--WDKIARLRREVNKKLEAERQNGLIGHSLDARVLLNI 848

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-D 625
             D+ S      E        + +  +FI+SQV+              ++ + L E + +
Sbjct: 849 ANDEYSFIKDYTE--------NEVSDLFIVSQVK--------------FANDNLAESEIE 886

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + I V +A G KCERCW Y  +VG    HP +C RC  VL
Sbjct: 887 GINIAVEKASGEKCERCWKYDEEVGHNHNHPDVCPRCSSVL 927


>gi|422416550|ref|ZP_16493507.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
 gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 921

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/333 (37%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    NS+SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNSVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|386054273|ref|YP_005971831.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
 gi|346646924|gb|AEO39549.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
          Length = 921

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  A+ +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAKSIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 923

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 206/332 (62%), Gaps = 38/332 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV  DW NPY+TL P+YEA QI+VFG M+ +GYIY+GKKPV+WSPSS +ALAEA
Sbjct: 137 SQFKRLGVRGDWENPYITLQPQYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F++        G+L++   D+ + +WTTTPWT+PAN  ++V+  
Sbjct: 197 EIEYQDKR-SPSIYVGFKVKDG----KGVLDQ---DVQIVIWTTTPWTIPANLGISVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
           L Y V E          A  +K                +VA +L+ ++  E  W    V+
Sbjct: 249 LNYVVAE----------AGGSK---------------YLVAEELLESVAGETGWEDPAVV 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           K T+ GS+LEN    HP+  R   V++G D++T ++GTG VHTAPGHG++D+    KYGL
Sbjct: 284 K-TVKGSELENILASHPLYGRDSLVMLG-DHVTVDAGTGCVHTAPGHGEDDFYVGQKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            +L PVDD+G  T EA  F GL    + N  + + L E+ +L+  +   H YP+DWRTKK
Sbjct: 342 EVLCPVDDKGLMTNEAEGFEGL-FYDEANKPITEALKEKGALLGLKFITHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 401 PVIFRATAQWFASIKDFRNELLEAVKETKWVP 432



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 199/358 (55%), Gaps = 31/358 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    +IG V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSIGNVV-VPAKVMNQLGADILRLWVASVDYQADVRVSDPILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    +++ +++L  +DQ+ L +L  +VKN++E+Y+ Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPEKDAVVFENLREVDQFMLVKLNKLVKNVKEAYDRYEFAGIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  +DLS+FY D AKD LY     +  RR+ QTVL   L+++ ++ APIL H A++
Sbjct: 705 AINNFCTLDLSSFYLDFAKDVLYIEAEDNADRRAIQTVLYESLVALAKLTAPILSHTADE 764

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW  +P A   E     +     + P  DE  +         W   + LR EV K LE A
Sbjct: 765 VWSFIPAAKE-ESVQLTDMPEYKELPNADELMKK--------WTSFMNLRDEVLKALEEA 815

Query: 551 RTGKLIGSSLEAKVYLF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
           R  K+IG SL AK+ L+   +  SL   ++E          ++++FI+S  E+      G
Sbjct: 816 RNEKVIGKSLAAKITLYPTAETRSLLDSIKE---------DVKQLFIVSAFEI-----GG 861

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                P     L    DK  I VS+AEG  CERCW  + +VG+   HP+LC RC  V+
Sbjct: 862 EYGEAPEEALKL----DKAAILVSKAEGETCERCWTVTPEVGADSSHPSLCPRCASVV 915


>gi|404408457|ref|YP_006691172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
 gi|404242606|emb|CBY64006.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
          Length = 921

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 195/337 (57%), Gaps = 42/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
            S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D    + + +S
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADS 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +   +  KW  F           +++R  V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 792 E--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD---- 834

Query: 574 ASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                    AK   D+L+    ++FI+S  E++       + N P S        ++V +
Sbjct: 835 -------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAV 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ AEG  CERC      VG   +HPTLC RC +++
Sbjct: 879 QITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 921

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 190/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|348577007|ref|XP_003474276.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Cavia
           porcellus]
          Length = 982

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 189/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D EYEA Q+ +F +M  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGEYEARQLRIFYKMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   H SRS+Y  F + + PP  + LL+   P   + VWTT PWTVPAN A+  + +
Sbjct: 257 ELEYNPEHTSRSVYVKFPLRTPPPKLASLLDGS-PAASVLVWTTQPWTVPANQALCYSPQ 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  GN          IVA+D V  L +   T L +  
Sbjct: 316 SKYAVV---------------KCSTSGNRY--------IVAADKVAPLGSTLDTTLEVIA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE+    HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLEDGTCSHPLIPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYGVASQHSLPV 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT  AG +  G  VL +G   V+K L    SL+ EE   H YPYDWRTKKP
Sbjct: 413 DCSVDEGGTFTAAAGPELEGKAVLEEGTDMVIKMLQHAKSLLKEEKLIHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA++QWF  +   +  A + +  VK++P
Sbjct: 473 IIIRASKQWFVKISDIKPTAKEVLKTVKFIP 503



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 142/343 (41%), Gaps = 62/343 (18%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P +GAD+LR WV+  +   +V +GP  L    +   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPFGADILRWWVAESNVFTEVTLGPSALSAAREDISKLRNTLRFLLGNLAGFNPQTDSVP 748

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            D + ++DQY L  L+++   +R                                  LY 
Sbjct: 749 VDGMYVLDQYMLHLLQSLATKVR------------------------------MPRSLYC 778

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+  L  + R  AP+LPHLAE+V+Q+LP+      G+    VF + 
Sbjct: 779 EREDDPKRRSCQTALAQILDVLTRAFAPVLPHLAEEVFQHLPY------GAEPRSVFRTG 832

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  A  G + G +          +  L 
Sbjct: 833 WISASTIWKK----------PGLEEAVEGACAMRDAFLGSIPGRNAAEYEVTVVIEPGLL 882

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
             + EM  A+  + +  L  + + S+  +L   P     ++    G +L+  EG D    
Sbjct: 883 FEIIEMLQAEETSSSSQLSELMMASRCTLLAQEPLQRPEDVTELGGTFLINLEGGDIREE 942

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               + V+ A   KC RCW Y+ +        TLC RC EV+ 
Sbjct: 943 ASYKVLVTPATQEKCPRCWKYTAEAAD-----TLCPRCAEVVG 980


>gi|336113716|ref|YP_004568483.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
 gi|335367146|gb|AEH53097.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
          Length = 922

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 196/329 (59%), Gaps = 34/329 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR GV  DW NPYLTL P YEA QI+VFG+M+ +GYIY+G KPV+WSPSS +ALA+AE
Sbjct: 138 AFKRLGVRGDWENPYLTLRPAYEAEQIKVFGEMAKKGYIYKGLKPVYWSPSSESALADAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F +        G+L+    D  + +WTTTPWT+P+N  +AVN ++
Sbjct: 198 IEYKDIK-SPSIYVAFDVKDG----KGVLD---TDTKIVIWTTTPWTIPSNLGIAVNPEI 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y VV+             NK      +L++   V              +W    V+ +T
Sbjct: 250 NYVVVK----------TGGNKYLVAEALLEEVSSVL-------------EWENAEVV-QT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE     HP+  R   V++ GD++TT+SGTG VHT+PGHG++D++   KYGL ++
Sbjct: 286 VPGKKLEYIVAKHPLYGRDSLVML-GDHVTTDSGTGCVHTSPGHGEDDFLIGKKYGLDVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
             VDD+G  T++A  F GL      N  + + LD+  +L+  +   H YP+DWRTKKP I
Sbjct: 345 CAVDDKGMMTKDAPGFEGL-FYDKANKPICEALDQAGALLKLKFLTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFASV+ FR   + A+ +V W P
Sbjct: 404 FRATSQWFASVDMFRDDILKAVEEVNWTP 432



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 199/340 (58%), Gaps = 30/340 (8%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T R++LGNL+D+  
Sbjct: 603 LPGKVVEQLGADIIRLWVASVDYQADVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y++L  +D++ L +L  +VK +RE+YE Y+F  I+  +  F   DLS+FY D A
Sbjct: 663 ARHQVAYEELREVDRFMLVKLNKLVKEVREAYERYEFATIYHAVNNFCATDLSSFYMDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 506
           KD LY     +  RR+ QTVL   L+++ ++++PILPH A++VWQ +P     +++    
Sbjct: 723 KDVLYIELADNPERRAMQTVLYECLVALTKLLSPILPHTADEVWQYIPGVTEESVQLTDM 782

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            E+V       L+EKW  F           + LR +V K LE AR  K+IG SL AKV L
Sbjct: 783 PEYVDLPDASALEEKWNAF-----------MALRGDVLKALEEARNAKVIGKSLTAKVTL 831

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           + ++ + A  L  +  +K      +++FI+S  EV      G I + P +   L    + 
Sbjct: 832 YVNEETKA-LLDSISESK------KQLFIVSGFEVA-----GAIEDAPENALKL----EH 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I V +AEG  CERCW  + +VG   +HPTLC RC +V+
Sbjct: 876 AAIVVEKAEGETCERCWVVTPEVGLDHDHPTLCPRCAQVV 915


>gi|260804683|ref|XP_002597217.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
 gi|229282480|gb|EEN53229.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
          Length = 960

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 197/354 (55%), Gaps = 30/354 (8%)

Query: 1   MASFKRYGVWADW-NNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 59
           M +F+R+GV ADW +  Y T D EYEA Q+EVF +M  +GYIY+  KPV +SPSSRTALA
Sbjct: 140 MDAFRRWGVMADWEHGCYFTFDKEYEAKQLEVFYKMYEKGYIYQDFKPVFYSPSSRTALA 199

Query: 60  EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           EAELEY E HVS S+YA F + +  P+   ++     D+ +  WTT PWT+PAN A+   
Sbjct: 200 EAELEYKEDHVSHSVYAKFPIATLSPALKDIVGGG-NDISVLTWTTLPWTIPANEAMCYT 258

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
              +Y + + ++  +                         I+A++ V       G  L +
Sbjct: 259 PSHEYCLCQCKTTGQ-----------------------LYILATERVEATAQVLGIHLEV 295

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G  LE     HP  + +   ++   +++   GTGLVHTAP HG EDY  +L + L
Sbjct: 296 LNTFPGIALEGSTCQHPTKSGKVSPLLPAQHVSMAKGTGLVHTAPAHGMEDYTVALAFQL 355

Query: 240 PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           P+L+ VD++GK+T++AG    G ++  DGN  VV+ L     L+ E+ Y+H YPYDWRTK
Sbjct: 356 PVLTMVDEDGKYTDQAGPDLKGKNIFTDGNETVVEQLRSAGHLVHEQNYKHSYPYDWRTK 415

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDY 352
           +P   RA+ QWF +    +  A+D IG V+  P     G  A  L+ WVS+ +Y
Sbjct: 416 EPVFIRASLQWFVNTNTIKDRAVDLIGGVRMYP----DGTAASSLKAWVSTRNY 465



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 41/347 (11%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLR WV+  D    V IG  +L    D   K+R  LR+LLGNL  +R G +++S
Sbjct: 635 PAYGADVLRWWVAGSDVHSHVYIGNNILNSARDSVLKVRRILRFLLGNLSGFRPGEHTVS 694

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           Y+ L  +DQY L  L    + + ++YE++ F K+  +    +  +LS+FY ++ KDRLY 
Sbjct: 695 YNQLRPLDQYMLHVLCQYAQKVTDAYENFHFTKVQYLTLGLVTKELSSFYLNITKDRLYC 754

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
              +S  RR CQTV    L  + + +AP+LPHLAE+++ +      ++       VF+S 
Sbjct: 755 DDQSSTGRRGCQTVQFHILEVLTKTLAPVLPHLAEEIYLHHTCLGEVQS------VFKSG 808

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK--VYLF----- 567
           W   D  W    +  +  W    ++R   N+ +E A   +L    + A   VY F     
Sbjct: 809 WFKTDPAWYRPDLEPL--WRVADDVRDAFNRQIESADP-RLYDVDIFASSTVYDFLKVLQ 865

Query: 568 TDDASLASRLREMCTA-----KHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYL 620
           +++ S  S L EM  +      H+         +SQ  V  +    NG  ++ P++    
Sbjct: 866 SEETSCTSDLCEMMMSSFVSLHHEDHQENSPSAVSQQSVTNVSQHQNGSKQSAPFT---- 921

Query: 621 VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                   + VS A   KCERC  Y     +     T C RC  V+A
Sbjct: 922 --------LHVSSASHQKCERCRKYVAASPT-----TPCDRCLAVMA 955


>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           H7858]
          Length = 921

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDHGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 195/337 (57%), Gaps = 42/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN++++YE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
            S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D    + + +S
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADS 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +   +  KW  F           +++R  V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 792 E--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD---- 834

Query: 574 ASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                    AK   D+L+    ++FI+S  E++       + N P S        ++V +
Sbjct: 835 -------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAV 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ AEG  CERC      VG   +HPTLC RC +++
Sbjct: 879 QITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|45946341|gb|AAH47880.3| IARS2 protein [Homo sapiens]
          Length = 889

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 74  SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 133

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 134 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 192

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 193 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 229

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 230 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 289

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 290 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 349

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 350 VVIRASKQWFINITDIKTAAKELLKKVKFIP 380



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 174/352 (49%), Gaps = 50/352 (14%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 566 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 625

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 626 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 685

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 686 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 739

Query: 515 W---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W         P L+E   +       F G I        KV+ V   G L     E    
Sbjct: 740 WISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLL----FEIIEM 795

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--E 622
           L +++ S  S+L E+  A             S+  +L   P  +  + I   G++L+  E
Sbjct: 796 LQSEETSSTSQLNELMMA-------------SESTLLAQEPREMTADVIELKGKFLINLE 842

Query: 623 GKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G D       KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 843 GGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 887


>gi|296818499|ref|XP_002849586.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840039|gb|EEQ29701.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 1517

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 201/341 (58%), Gaps = 34/341 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+++ +  DW+N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 655 MEGFRKWAIMGDWDNAYTTMNKDFERRQLGVFLEMVEKGLIYRRYKPVYWSPSSGTALAE 714

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPST--SGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E HVS +    F + + P     + LL+    D+   +WTTTPWT+PANAA+AV
Sbjct: 715 AELEYKEDHVSTAALVKFALENLPARIRENSLLSN--SDISAVIWTTTPWTLPANAALAV 772

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVASDLVPTLEAKWGTK 176
           +  L+Y +V+  S   G      ++      +L D  KV +  I+ S+L+ +        
Sbjct: 773 SPTLEYTIVD--SAHHGKLLVAQSRLQYLQELLDDNLKVIVPAILGSELLDS-------- 822

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
              +    G + E+ R            +I  D++T ++G+G+VH APGHG EDY T L 
Sbjct: 823 -TYRPHFKGPEAESQR------------IIAADFVTADAGSGIVHCAPGHGMEDYETCLA 869

Query: 237 YGLPILSPVDDEGKFTE-----EAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P  +PVD EG+FT+     +    +G  VLGDGN+AV+KYL E+  L+ +  Y+HKY
Sbjct: 870 LGIPAYAPVDGEGRFTQATMPTQPDLLTGKAVLGDGNIAVIKYLSEKGILMHKHAYKHKY 929

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           PYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 930 PYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 970



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 24/336 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L  +   N + Y+ L
Sbjct: 1184 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQGFDPKNEVPYESL 1243

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              ID+ AL QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KDRLY     
Sbjct: 1244 YAIDKIALLQLHNLVKTSQEAIDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSEN 1303

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
              +RR+ QT L      I  ++ PI+P L E+ W++ P   ++++     F    K P +
Sbjct: 1304 GISRRAAQTTLFHIYTHIQTLLGPIVPLLVEETWEHTP--ESIKEVMRHPFQRTLKSPNI 1361

Query: 519  DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRL 577
            +  WR   +   Y +  ++   + +  + E AR+ K +GSSL++ V+L    + +L+ +L
Sbjct: 1362 E--WRNDTLE--YEYSVMVAANSAIKAMQETARSKKQMGSSLQSFVHLILPRSFTLSEQL 1417

Query: 578  REMCTAKHDADTLQRIFIISQV----EVLPSTPNGLIR-NIPYSGEYLVEGKDKVWIGVS 632
            R           L  +F++S V    E  P  PN L +    Y  E+ +         V 
Sbjct: 1418 R---------SELPDLFVVSSVTLGSEADPK-PNDLAQAEWTYHSEFKLPDDQTGKAYVY 1467

Query: 633  RAEGSKCERCWNYSTQVGSF--VEHPTLCSRCYEVL 666
                +KC RCW Y+ +       +   LC RC +V+
Sbjct: 1468 TPSQAKCPRCWRYAVKPTETKPKDEEELCHRCEDVV 1503


>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|386732756|ref|YP_006206252.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
 gi|404281624|ref|YP_006682522.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
 gi|404287442|ref|YP_006694028.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|405750366|ref|YP_006673832.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
 gi|405753239|ref|YP_006676704.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
 gi|405756172|ref|YP_006679636.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
 gi|406704797|ref|YP_006755151.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
 gi|417315656|ref|ZP_12102332.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
 gi|424714889|ref|YP_007015604.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
           LL195]
 gi|424823772|ref|ZP_18248785.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
 gi|81403188|sp|Q71Y01.1|SYI_LISMF RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|259511508|sp|C1KWW3.1|SYI_LISMC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
 gi|332312452|gb|EGJ25547.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
 gi|384391514|gb|AFH80584.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
 gi|404219566|emb|CBY70930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
 gi|404222439|emb|CBY73802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
 gi|404225372|emb|CBY76734.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
 gi|404228259|emb|CBY49664.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
 gi|404246371|emb|CBY04596.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|406361827|emb|CBY68100.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
 gi|424014073|emb|CCO64613.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
           LL195]
          Length = 921

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 195/337 (57%), Gaps = 42/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN++++YE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
            S  RR+ QTV    ++++ +++APILPH  E+VW +L      +  L+D    + + +S
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADS 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +   +  KW  F           +++R  V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 792 E--EITAKWDAF-----------MQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD---- 834

Query: 574 ASRLREMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
                    AK   D+L+    ++FI+S  E++       + N P S        ++V +
Sbjct: 835 -------GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAV 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ AEG  CERC      VG   +HPTLC RC +++
Sbjct: 879 QITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 932

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 198/329 (60%), Gaps = 35/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W+ PYLTL P YEA QI VFG+M+ +GYIY+G KPV+W  +  TALAEAE+
Sbjct: 143 FKRLGVRGQWDKPYLTLMPHYEARQIGVFGEMARKGYIYKGLKPVYWCAACETALAEAEV 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E   +  + +WTTTPWT+PAN A++++   +
Sbjct: 203 EYGDKQ-SASIYVRFPVKDG----KGILPE--ENTYVVIWTTTPWTLPANVAISLHPDFK 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT-LEAKWGTKLVIKKT 182
           Y ++                  R G     +K    +VA DL+   LEA   +       
Sbjct: 256 YVLI------------------RSGG----EK---YLVAGDLLDNFLEAVGMSGAETVGE 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP  +R   ++I G+++T + GTG VHTAPGHG ED++   +YGLP++
Sbjct: 291 YKGFELERVECGHPFMDR-ISLLILGEHVTLDQGTGCVHTAPGHGMEDFIVGRQYGLPVI 349

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD +G+FT E G F+G   L D N ++++ LD +  L+      H+YP+ WR KKP  
Sbjct: 350 SPVDGKGRFTGEGGIFAGQFYL-DANRSIIEELDRRGHLMKCSTILHQYPHCWRCKKPVF 408

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFAS++GFRQAA+DAI +V+W+P
Sbjct: 409 FRATEQWFASIDGFRQAALDAIRKVRWIP 437



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/329 (37%), Positives = 189/329 (57%), Gaps = 22/329 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+   G+ + Y  
Sbjct: 621 GADILRLWVSSADYRGDLAVSQNILKQMTESYRKIRNTCRFLLGNLYDFDPAGDRVEYGQ 680

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++AL +L+ +++ +  +Y +Y++  ++  +  F +VD+S  Y D+ KDRLYT   
Sbjct: 681 MHEVDRWALVRLQKLIQKVIAAYRNYEYHVVYHAVHGFCVVDMSALYLDIIKDRLYTAPA 740

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L+++VR+IAP+L   +E++WQ +P      D   A  V  +  P 
Sbjct: 741 RSTARRAAQTVLYEVLVALVRLIAPVLAFTSEEIWQYVP-----GDKGGAISVQLTDMP- 794

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + K           W ++L +R EV + LE AR  KLIG+SLEA V L+  +  L + L
Sbjct: 795 -EVKEEFLDDELEERWERLLAVRGEVTRALEAARREKLIGNSLEAAVELYAGE-ELHNFL 852

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             M      A  L  +FI+S+V +      G +   P +  +  +   ++ I V +A+G 
Sbjct: 853 ESM------AAELATVFIVSEVVL------GRLDGAPEAA-WKSDSIPELAIFVRQAKGK 899

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW Y   VG    HP +C RC EVL
Sbjct: 900 KCERCWMYHEGVGIDSGHPAVCPRCAEVL 928


>gi|349612334|ref|ZP_08891555.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
 gi|348608930|gb|EGY58897.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
          Length = 928

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 200/330 (60%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++               +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDGKDVLD------TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 167/335 (49%), Gaps = 40/335 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
               RRS QTV+   L+ + +++ PILPH  E++W  L     F    +      F  E+
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLKEPEKFVQLTDMPEVQHFANEN 792

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDA 571
              V+   W+ F           + LR++V K LE AR  K+IG S EA V L+   D A
Sbjct: 793 ---VILSNWKRF-----------MTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTA 838

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
            L   L        +AD  Q I I+S + +   T   + +N+    E+   G     I V
Sbjct: 839 ELLESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVV 879

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             A+G  C RC   +           LCSRC +++
Sbjct: 880 EHAQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 921

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 200/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P+L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPSLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T ++GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATADAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY +
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYKN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPKHPTLCGRCADIV 915


>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 928

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 200/330 (60%), Gaps = 37/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKGKKPVYWSWSSESTLAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   + SI+  F+++               +  L +WTTTPWT+PAN A+ VN K  
Sbjct: 199 EYKDVE-ANSIFVAFKLIDGKDVLD------TDNTYLIIWTTTPWTIPANEAICVNPKFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y++V++                       D+K    +VA+ L+  +  E  W    V+ K
Sbjct: 252 YSLVQVN----------------------DKK---FVVATGLLEKVAQEIGWDEYHVV-K 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  GS++E  +  HP+ +++  +VI G ++T + GTGLVHTAPG G +D+   LKY LPI
Sbjct: 286 SFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHTAPGFGADDFNVGLKYNLPI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVD +G +T+E  + +G+    D +  +++ L    +L+  + + H YP+DWRTKKP 
Sbjct: 345 FSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALLKLKVFTHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 404 IFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 36/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+   L+ + +++ PILPH  E++W  L            +FV  +  P 
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYLK--------EPEKFVQLTNMPE 784

Query: 518 LDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF--TDDASL 573
           +    + F    +    W + + LR++V K LE AR  K+IG S EA V L+   D A L
Sbjct: 785 V----QHFANENVILSNWKRFMTLRSDVLKALEDARNKKVIGKSFEAHVILYPKADTAEL 840

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
              L        +AD  Q I I+S + +   T   + +N+    E+   G     I V  
Sbjct: 841 LESL--------NADVRQ-ILIVSDLTIENETK--MPQNVE---EFATAG-----IVVEH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  C RC   +           LCSRC +++
Sbjct: 882 AQGDVCPRCRRTTNDFCKNGSLSNLCSRCADIV 914


>gi|158256300|dbj|BAF84121.1| unnamed protein product [Homo sapiens]
          Length = 940

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 125 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 184

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 185 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 243

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 244 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 281 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 340

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 341 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 400

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 401 VVIRASKQWFINITDIKTAAKELLKKVKFIP 431



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 174/352 (49%), Gaps = 50/352 (14%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 617 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 676

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 677 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 736

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 737 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 790

Query: 515 W---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W         P L+E   +       F G I        KV+ V   G L     E    
Sbjct: 791 WISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLL----FEIIEM 846

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--E 622
           L +++ S  S+L E+  A             S+  +L   P  +  + I   G++L+  E
Sbjct: 847 LQSEETSSTSQLNELMMA-------------SESTLLAQEPREMTADVIELKGKFLINLE 893

Query: 623 GKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G D       KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 894 GGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 938


>gi|291402374|ref|XP_002717549.1| PREDICTED: mitochondrial isoleucine tRNA synthetase [Oryctolagus
           cuniculus]
          Length = 1012

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 191/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTYDAKYEAKQLRIFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP  + L++   P +    WTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPPPKLASLIDTSSP-VSFLAWTTQPWTIPANQAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V               K S+ G++         I+A + V ++ +   T   I  
Sbjct: 316 SKYALV---------------KCSKSGDLY--------ILAEEKVASVASTLETTFEIIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFPGGDLENGSCSHPLIPDKVSPLLPANHVTMAKGTGLVHTAPAHGLEDYSVASQHKLPV 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FTE AG +     VL +G  AV+K L     L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGIFTEGAGPELQNKAVLDEGTDAVIKMLQTTKHLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + +  VK++P
Sbjct: 473 VVIRASKQWFINISDIKTTAKELLKTVKFIP 503



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 171/344 (49%), Gaps = 36/344 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689  PPYGADVLRWWVAESNVFTEVTIGPSALSAARDDISKLRNTLRFLLGNLAGFNPETDSVP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             D++ +IDQY L  L+++   I ESY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749  VDNMYVIDQYMLHLLQDLASKISESYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EDENDPKRRSCQTALAKILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P     + I  +G +L+  EG D    
Sbjct: 913  FEIIEMLQAEETSSTSQLNELMMASQTTLLAQEPREKSTDVIELNGTFLINLEGGDIHEE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               KV +  +  E  KC RCW Y+++        TLC RC EV+
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTSESSD-----TLCPRCAEVV 1009


>gi|114325408|gb|AAH40376.2| IARS2 protein [Homo sapiens]
          Length = 957

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 142 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 201

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 202 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 260

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 261 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 297

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 298 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 357

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 358 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 417

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 418 VVIRASKQWFINITDIKTAAKELLKKVKFIP 448



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 174/352 (49%), Gaps = 50/352 (14%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 634 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 693

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 694 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 753

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 754 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 807

Query: 515 W---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W         P L+E   +       F G I        KV+ V   G L     E    
Sbjct: 808 WISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLL----FEIIEM 863

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--E 622
           L +++ S  S+L E+  A             S+  +L   P  +  + I   G++L+  E
Sbjct: 864 LQSEETSSTSQLNELMMA-------------SESTLLAQEPREMTADVIELKGKFLINLE 910

Query: 623 GKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G D       KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 911 GGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 955


>gi|259503041|ref|ZP_05745943.1| isoleucine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168907|gb|EEW53402.1| isoleucine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 931

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 201/331 (60%), Gaps = 35/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ KKPV+WS SS +ALAEAE
Sbjct: 138 DFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQAKKPVYWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + +A            G L++   +  L VWTTTPWTVPA+ AVAVNAK 
Sbjct: 198 VEYHDVVAKTAFFA-----EQVKDGKGRLDD---NTYLVVWTTTPWTVPASEAVAVNAKF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            Y+VV+           PAN   +             +VA+DL+  +  K G     +  
Sbjct: 250 DYSVVK-----------PANDDRQ------------FVVATDLLDGVADKLGWEDFEVVD 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G+ L+     HP  +R   +V   DY+T ++GTGLVHTAPG+G +DY   L++ LPI
Sbjct: 287 HFSGAALDGMVTKHPYLDRDI-LVGTADYVTADAGTGLVHTAPGYGDDDYHFGLEHNLPI 345

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            +P++D+G  ++E G  F+G+    D +   +K L+E  SL++EEP +H YP+DWRTKKP
Sbjct: 346 FAPINDQGVLSKENGADFAGV-FYQDADDISLKKLEETGSLLLEEPLKHSYPFDWRTKKP 404

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT+QWF S++  RQ  +DA+  VK+ P
Sbjct: 405 IIFRATDQWFVSIDKMRQDILDALEDVKYQP 435



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 179/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++   +++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFKPTDDTVSYEK 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LNSVDQYMLVKLNHFLKQMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAKDVLYIEPA 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV    LL++V+++ PILPH AE+VW+ +            +FV  ++ P 
Sbjct: 735 DSHARRSMQTVFYNILLTMVKLLTPILPHTAEEVWEYM--------DEPEDFVQLTEIP- 785

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D +        +  W + +++R+ V K LE AR  K IG SLEA+V L+ DD       
Sbjct: 786 -DPQNFANEAALLEQWDRFMDVRSHVLKGLEEARNAKQIGKSLEAQVDLYLDDQQ----- 839

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +++ T     D  + + ++  V  L   P   +   P + ++  +G   V + V+ A G 
Sbjct: 840 QQLLT-----DLDEDVALLLGVSALHVHP---LDEAPEAADHYDDG---VAVQVAPAAGE 888

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC      VGS   +P LC+RC +++
Sbjct: 889 TCARCRMVKEDVGSDDAYPMLCARCAKIV 917


>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 921

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L    P   + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+  L  K G +  ++ KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLAGLREKLGFEDAIVLKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRIVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGI-FYDTANKMVTERLEEVGALLKLEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   ++A+  V W P
Sbjct: 404 FRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 192/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L+++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLDDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLPE 784

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           + +   +  +     W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 785 VKDLAGSEEI--TAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P +   +    ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPENALKV----NQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG    HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPNHPTLCGRCADIV 915


>gi|126307099|ref|XP_001375630.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Monodelphis
           domestica]
          Length = 1017

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 189/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+++F QM  +  IYR  KPV WSPS+RTALAEA
Sbjct: 202 SAFIRWGIMADWNNCYHTFDGKYEAQQLKIFYQMYAKDMIYRAYKPVFWSPSARTALAEA 261

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   H+SRS+Y  F +V  PP  + +L+   P +   +WTT PWT+PAN AV    +
Sbjct: 262 ELEYNPKHISRSVYVKFPLVKPPPLLASVLDGLSP-VSAIIWTTQPWTIPANQAVCYMPE 320

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y++++  +  E                       F IV +D V +     GT+  +  
Sbjct: 321 AKYSIIKCANSGE-----------------------FYIVGADKVQSTATALGTQFEVIS 357

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+DLE+    HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP 
Sbjct: 358 TFLGADLESASCAHPTIADKVSPLLPANHVTMSKGTGLVHTAPAHGMEDYSVASMHKLPT 417

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG+     +VL +G   V+K L+   +L+ EE   H YPYDWRTKKP
Sbjct: 418 DCLVDENGIFTEAAGRELQNKNVLEEGVDIVIKMLESTKNLLKEEQVTHSYPYDWRTKKP 477

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I R + QWF  +E    +A +++ +VK++P
Sbjct: 478 VIIRPSMQWFIKIENMFASAQESLKKVKFLP 508



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 165/342 (48%), Gaps = 32/342 (9%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YG D+LR W++  +   +V IGP++L    D   KLR TLR+LLGNL D+    +++S
Sbjct: 694  PPYGVDILRWWIAESNIFNEVKIGPRILNAARDDINKLRNTLRFLLGNLADFNPETDAVS 753

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  L++    I E+Y  + F K+ +++Q F    LSNFYF + KDRLY 
Sbjct: 754  IKNMYIIDQYMLHLLQDFGNKITEAYRQFDFGKVVRLLQAFYPSQLSNFYFSIVKDRLYC 813

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR IAPILPHLAE+V+Q++P+          + VF S 
Sbjct: 814  EKEDDPKRRSCQTALAEILDVMVRSIAPILPHLAEEVYQHIPYE------KEPKSVFRSG 867

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  A  G + G +  A   +   +  L 
Sbjct: 868  WISTSSLWKK----------PGLEEAVESACSMRDAFLGSIPGQNPVAFEIIIVLEPGLL 917

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM   +  ++T  L  + + S+  +L   P  +  +     G YL+  EG D    
Sbjct: 918  FEIFEMLHPEDVSETSELNELMMASKTTLLTQDPIAIPADATELRGNYLINLEGGDIREE 977

Query: 626  -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                + V  A   KC RCW Y++           C RC +VL
Sbjct: 978  TSYKVIVVPATKEKCPRCWKYTSDSPD-----QTCPRCTKVL 1014


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
          Length = 928

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 192/336 (57%), Gaps = 42/336 (12%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV  DW++PY+TL+P YEA QI VFG+M+ +GYIY+G KPV+W PS  TALAEA
Sbjct: 138 GQFKRLGVRGDWDHPYMTLEPGYEAVQIRVFGEMAKKGYIYQGLKPVYWCPSCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSA-----PPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAV 116
           E+EY +  VS SIY  F +V       P  TS           + +WTTTPWT+ AN AV
Sbjct: 198 EIEYRD-KVSPSIYVKFPVVDGQGVVDPAGTS-----------VVIWTTTPWTLVANQAV 245

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 176
           A+    +Y +VE+       S      K R  +VLK   +             +   G  
Sbjct: 246 ALGPDFRYVLVEV------GSERWVVAKDRLTHVLKAAGR-------------DPDAGRV 286

Query: 177 LVIKKTLAGSDLENCRYVHPVDN-RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           L   K  AG  LE     HP    R+ PVV+G D++T ++GTG VHTAPGHG EDY+  L
Sbjct: 287 L---KEFAGRALEGAILQHPFHKGRRAPVVLG-DHVTLDAGTGAVHTAPGHGMEDYLVGL 342

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           KY LPI +P+DD G+FT EAG+          N  +   L  + S++ E    H+YP+ W
Sbjct: 343 KYHLPIEAPIDDRGRFT-EAGQPVAGQFYAKANDVLCDLLRREGSMVAEGEIRHQYPHCW 401

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFAS++ FRQ  +D I +V+W+P
Sbjct: 402 RCKNPVIFRATEQWFASIDKFRQEMLDEIEKVQWIP 437



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 191/334 (57%), Gaps = 27/334 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWV+SVDY  D  +   +L+Q++++YRK+R T R+LLGNL+ +    +  SY+ 
Sbjct: 617 GADILRLWVASVDYRSDARVSDAILKQVAEVYRKIRNTFRFLLGNLNGFDPAAHRTSYEH 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++AL QL+ +V+    +Y +Y+F  +F  +  F  V +S FY DV KDRLY    
Sbjct: 677 MTELDRWALDQLQRLVERTSAAYRNYEFHLVFHAVHNFCAVQMSAFYLDVLKDRLYCSRE 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QT +   L+++V+++API+ H A++VW  +P       G +A+      WP 
Sbjct: 737 ADPIRRSAQTAMYEILVTLVKLVAPIISHTADEVWGYIPGV----KGPSAQL---EDWPQ 789

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +  +W+   +  +  W +ILE R EV K LE AR  K+IG+SL A V ++     L  R 
Sbjct: 790 VRSEWKDDAL--MRKWERILEFRYEVAKGLETARQQKVIGNSLGAAVEVW-----LGPRF 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            ++   +  A+ L +I I+SQV V     +G    +P S     EG   V + V+ A+G 
Sbjct: 843 EDI---RGMAEELPQILIVSQVSV-----HGPEETVP-SDALEFEG---VSVRVTPAQGE 890

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI 671
           KC+RCW    +VG+   HP LC RC EV+   P+
Sbjct: 891 KCQRCWMVLPEVGTVEGHPDLCRRCAEVVDELPL 924


>gi|7678804|dbj|BAA95147.1| mitochondrial isoleucine tRNA synthetase [Homo sapiens]
          Length = 993

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 178 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 237

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 238 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 296

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 297 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 333

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 334 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 393

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 394 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 453

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 454 VVIRASKQWFINITDIKTAAKELLKKVKFIP 484



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 173/352 (49%), Gaps = 50/352 (14%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 670 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 729

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 730 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 789

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P+          + VF + 
Sbjct: 790 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYI------KEPKSVFRTG 843

Query: 515 W---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           W         P L+E   +       F G I        KV+ V   G L     E    
Sbjct: 844 WISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLL----FEIIEM 899

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--E 622
           L +++ S  S+L E+  A             S+  +L   P  +  + I   G++L+  E
Sbjct: 900 LQSEETSSTSQLNELMMA-------------SESTLLAQEPREMTADVIELKGKFLINLE 946

Query: 623 GKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G D       KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 947 GGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 991


>gi|7022287|dbj|BAA91544.1| unnamed protein product [Homo sapiens]
          Length = 764

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 56  SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 115

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 116 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 174

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 175 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 211

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 212 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 271

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 272 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 331

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 332 VVIRASKQWFINITDIKTAAKELLKKVKFIP 362



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/207 (43%), Positives = 119/207 (57%), Gaps = 16/207 (7%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 548 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 607

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 608 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 667

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 668 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 721

Query: 515 W---------PVLDEKWRTFPVGEIYF 532
           W         P L+E WR     E +F
Sbjct: 722 WISTSSIWKKPGLEEAWRVRVQCETHF 748


>gi|326476748|gb|EGE00758.1| isoleucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326484807|gb|EGE08817.1| isoleucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 1012

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 144/344 (41%), Positives = 198/344 (57%), Gaps = 40/344 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + +  DW+N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 149 MEGFRNWAIMGDWDNAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSSTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY E H+S +    F + + P   S +L   L    D+   +WTTTPWT+PANAA+A
Sbjct: 209 AELEYKEDHISTAALVKFVLDNLP---SQVLEHPLLAGNDISAVIWTTTPWTLPANAALA 265

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           VN   +Y +V+                +R G +L  Q ++       L   LE  +    
Sbjct: 266 VNPDFEYTIVD---------------STRHGKLLVAQSRL-----QYLQELLEDDF---T 302

Query: 178 VIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           V+   + GS+L N  Y      P   +Q   VI  D++T ++G+G+VH APGHG EDY  
Sbjct: 303 VVIPAIMGSELLNSTYRSHFKGPESEKQ--RVIAADFVTADAGSGIVHCAPGHGMEDYEV 360

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+P  +PVD EG+FT+ A        +G  VLGDGN AV+KYL E+  LI +  Y+
Sbjct: 361 CLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKAVLGDGNHAVIKYLSEKGILIHKHAYK 420

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 421 HKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 464



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 170/342 (49%), Gaps = 36/342 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             ID+ +L QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKISLVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV---FESKW 515
             +RR+ QT L      I  ++ PI+P L E+ W++ P       GS   F+   F+  +
Sbjct: 798 GISRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP-------GSIKGFLKHPFQRTF 850

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLA 574
              D KW+   +   Y    ++   + +  + E AR+ K +GSSL++ V+L   +   ++
Sbjct: 851 KSPDSKWKNDILEHEY--SAMVAANSAIKAMQETARSKKQMGSSLQSFVHLVLPEGFEIS 908

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-----PYSGEYLVEGKD--KV 627
            +L+           L   F++S V  + S  + ++ +I      Y+ E+ +      K 
Sbjct: 909 EQLQS---------ELPDFFVVSSV-TIGSECDSVLDDITQAEWSYNSEFKLPNDQIGKA 958

Query: 628 WIGVSRAEGSKCERCWNYS---TQVGSFVEHPTLCSRCYEVL 666
           W  V     +KC RCW Y+   T+ G   E   LC RC EV+
Sbjct: 959 W--VYTPTQAKCPRCWRYAVQPTETGPKDEE-ELCHRCEEVV 997


>gi|296479298|tpg|DAA21413.1| TPA: isoleucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 919

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 190/331 (57%), Gaps = 27/331 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEAE
Sbjct: 105 SFIRWGIMADWNNCYYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAE 164

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   H+SRS+Y  F ++   P  + LL+   P +   VWTT PWT+PAN AV    + 
Sbjct: 165 LEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSP-VSFLVWTTQPWTIPANQAVCYMPES 223

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV+  S   GD                       I+ +D V ++ +  GT   +  T
Sbjct: 224 KYAVVKCSS--SGD---------------------LYILGADKVTSVASTLGTTFEVIST 260

Query: 183 LAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +G DLEN    HP +  R+ P ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 261 FSGVDLENGSCAHPLISERESP-LLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLST 319

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G  AV+  L    +L+ EE   H YPYDWRTKKP
Sbjct: 320 DCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKP 379

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 380 VVIRASKQWFVNITDIKTTAKELLKKVKFIP 410



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 596 PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 655

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 656 VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 715

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 716 ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 769

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 770 WIKTSSIWKK----------PGLEEAIESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 819

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
             + EM  A+  + T  L  + + SQ  +L   P G+  ++    G +L+  EG D    
Sbjct: 820 FEIMEMLQAEETSSTSQLNELMMASQTTLLSQEPRGISEDVTELKGTFLINLEGGDIREE 879

Query: 626 ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              KV +  +  E  KC RCW Y+ +        TLC RC EV+
Sbjct: 880 SSYKVIVMTTTKE--KCPRCWKYTAESSD-----TLCPRCAEVV 916


>gi|327298613|ref|XP_003234000.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464178|gb|EGD89631.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1012

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 197/344 (57%), Gaps = 40/344 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 149 MEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY E H+S +    F + + P   S +L   L    D+   +WTTTPWT+PANAA+A
Sbjct: 209 AELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGSDISAVIWTTTPWTLPANAALA 265

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           VN   +Y +V+                +R G +L  Q ++       L   LE  +    
Sbjct: 266 VNPDFEYTIVD---------------STRHGKLLVAQSRL-----QYLQELLEDDF---T 302

Query: 178 VIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           V+   + GS+L N  Y      P   +Q   +I  D++T ++G+G+VH APGHG EDY  
Sbjct: 303 VVIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAADFVTADAGSGIVHCAPGHGMEDYEA 360

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+P  +PVD EG+FT+ A        +G +VLGDGN AV+KYL E   LI +  Y+
Sbjct: 361 CLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKYLSETGILIHKHDYK 420

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 421 HKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 464



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 32/340 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
             +RR+ QT L      I  ++ PI+P L E+ W++ P           +  F+      
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTPGNIK----GCLKHPFQRTIKSP 853

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRL 577
           D KW+   + + Y    ++   + +  + E AR+ K +GSSL++ V+L   +   ++ +L
Sbjct: 854 DSKWKNNLLEDEY--SAMVAANSAIKAMQETARSKKQMGSSLQSFVHLVLPEGFEISEQL 911

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-----PYSGEYLVEGKD---KVWI 629
           +           L   F++S V  + S  + ++  I      Y+ E+ +  KD   K W 
Sbjct: 912 QS---------ELPDFFVVSSV-TIGSECDSVLNEITQAEWSYNSEFKLP-KDQIGKAW- 959

Query: 630 GVSRAEGSKCERCWNYS---TQVGSFVEHPTLCSRCYEVL 666
            V     +KC RCW Y+   T+ GS  E   LC RC EV+
Sbjct: 960 -VYTPTQAKCLRCWRYAVQPTETGSKGEE-DLCHRCEEVV 997


>gi|344996023|ref|YP_004798366.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|343964242|gb|AEM73389.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 42/336 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLAVWTTTPWTVPANAAVAV 118
           +EY E   + SIY  F ++       GL +  LP     + + +WTTT WT+P N A+A+
Sbjct: 199 IEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIVIWTTTTWTLPGNLAIAL 252

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA   Y++V+I                  GN +       ++VAS+LV  +      K+ 
Sbjct: 253 NADFDYSLVDI------------------GNEI-------LVVASELVERVMK--TNKIE 285

Query: 179 IKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
             + +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    
Sbjct: 286 QYQEIARFKGKDLEYVKCKHPFLDRS-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQ 344

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ W
Sbjct: 345 RYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEASGHLLGVEKITHQYPHCW 403

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 404 RCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 200/333 (60%), Gaps = 38/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I  ++++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKEIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 DLKEIDRWALQRLYMLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++ ++IAPIL   AE+VWQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEVWQNI--AFKEED---AESVFLTSWP 793

Query: 517 VLDE---KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            ++E   K  T        W KI+E++  V K LE+AR  KLIGSSL++KV +F     +
Sbjct: 794 KVNEGILKDETLREK----WNKIIEIKDIVAKQLEIARNEKLIGSSLDSKVKIFA--KGI 847

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             +  E      + D +Q + I+SQ+EV     N                  ++ + V +
Sbjct: 848 DKKFIE-----ENKDIIQEVLIVSQLEVEEGDEN------------------QIKVEVYK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+GSKCERCW + T VG   E   +C RCYEV+
Sbjct: 885 ADGSKCERCWKFDTMVGKNEESLNVCPRCYEVV 917


>gi|114572728|ref|XP_514209.2| PREDICTED: isoleucine--tRNA ligase, mitochondrial isoform 3 [Pan
           troglodytes]
 gi|410224418|gb|JAA09428.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410259032|gb|JAA17482.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410308538|gb|JAA32869.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410330099|gb|JAA33996.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
          Length = 1012

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|259485657|tpe|CBF82864.1| TPA: hypothetical protein similar to isoleucine/valine tRNA
           synthetase (Broad) [Aspergillus nidulans FGSC A4]
          Length = 1000

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 143/343 (41%), Positives = 201/343 (58%), Gaps = 39/343 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MNGFRSFVVMADWENHWKTMDKDFEKRQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY + HVS + +  F +V+ P   S L  + L    D+   +WTTTPWT+PANAA+A
Sbjct: 207 AELEYKDDHVSTAAFVKFPLVTVP---SHLKRDPLLQGKDISAVIWTTTPWTLPANAAIA 263

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           ++   QY +VE        SAA                  +++VA   +  LE      L
Sbjct: 264 IHPLFQYTIVE--------SAAHG----------------YLLVAQSRLEYLEFVLKEDL 299

Query: 178 -VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
            VI  ++ GS+L +     P+    N +   +I  D++T +SGTGLVH APGHG EDY  
Sbjct: 300 SVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTADSGTGLVHCAPGHGMEDYEA 359

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+   +PVDD GKFT+ A      + SG  VL DGNVAV++Y++ Q  L+ +  Y 
Sbjct: 360 CLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYG 419

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           H+YPYDWR+K+P I RATEQWFA V   + +A+ A+  V++VP
Sbjct: 420 HRYPYDWRSKQPIIIRATEQWFADVADIQSSALKALDDVQFVP 462



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 9/328 (2%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +S DYT DV++G QVL+ +     K R T + LLG L D+R  N + YD L
Sbjct: 675 GPDALRLWAASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKVQYDQL 734

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
            ++D+ AL  L  +    R + E ++F+K    + R+  ++ S FY +  KDRLYT    
Sbjct: 735 LLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLYTYAEN 794

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +  V+ PI P L E+ W++ P A      +A E          
Sbjct: 795 SPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTPEALK----AAFEHPLRRTVSKP 850

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
           D +W+   +   Y   +I+ + + +  +LE AR  K  GSSL++ V++   + +  S L+
Sbjct: 851 DPQWQDPSLSGDY--QEIVTVHSAIKSMLEKARGNKQTGSSLQSFVHIQLPNTATQSVLQ 908

Query: 579 EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSK 638
                  D   +  + +    E LP T            E  + GK +V++   +A  SK
Sbjct: 909 RKLEELPDIFVVSSVTLTGSEEALPDTIASADWQYSEEFELPIGGKGRVYVYSPQA--SK 966

Query: 639 CERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           C RCW Y             C+RC EV+
Sbjct: 967 CPRCWRYVIPQAEAAADKA-CNRCEEVV 993


>gi|46852147|ref|NP_060530.3| isoleucine--tRNA ligase, mitochondrial precursor [Homo sapiens]
 gi|94730583|sp|Q9NSE4.2|SYIM_HUMAN RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|33112162|gb|AAP94033.1| isoleucine tRNA synthetase [Homo sapiens]
 gi|119613711|gb|EAW93305.1| isoleucine-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|187952611|gb|AAI37439.1| Isoleucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 1012

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 174/352 (49%), Gaps = 50/352 (14%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  W---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            W         P L+E   +       F G I        KV+ V   G L     E    
Sbjct: 863  WISTSSIWKKPGLEEAVESACAMRDSFLGSIPGKNAAEYKVITVIEPGLL----FEIIEM 918

Query: 566  LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--E 622
            L +++ S  S+L E+  A             S+  +L   P  +  + I   G++L+  E
Sbjct: 919  LQSEETSSTSQLNELMMA-------------SESTLLAQEPREMTADVIELKGKFLINLE 965

Query: 623  GKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            G D       KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 966  GGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 206/336 (61%), Gaps = 42/336 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA Q+ VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQVRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLAVWTTTPWTVPANAAVAV 118
           +EY E   + SIY  F ++       GL +  LP     + + +WTTT WT+P N A+A+
Sbjct: 199 IEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIVIWTTTTWTLPGNLAIAL 252

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA   Y++++I                  GN +       ++VAS+LV  +      K+ 
Sbjct: 253 NADFDYSLIDI------------------GNEI-------LVVASELVERVMK--TNKIE 285

Query: 179 IKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
               +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    
Sbjct: 286 QYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQ 344

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           KY +P++ PVD++G  T+EAGKF+GL    D N  + K L+   +L+  E   H+YP+ W
Sbjct: 345 KYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELENSGNLLGVEKITHQYPHCW 403

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 404 RCKNPVIFRATEQWFASVKGFREEALKAVDSVKWVP 439



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/333 (38%), Positives = 198/333 (59%), Gaps = 38/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RR+ QTV+   L+++ ++IAPIL   AE++WQN+  AY  E+    E VF + WP
Sbjct: 739 SESLDRRAAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AYKEEN---VESVFLTSWP 793

Query: 517 VLDE---KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            ++E   K  T        W KI+E++  V K LE+AR  KLIGSSL++KV +F     +
Sbjct: 794 KVNEGILKDETLREK----WDKIIEIKDIVAKQLEIARNEKLIGSSLDSKVKIFA--KGI 847

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             R  E      + D +Q + I+SQ+EV                       D++ + V +
Sbjct: 848 NKRFIE-----ENKDIIQEVLIVSQLEVEEGDS------------------DQMKVEVYK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+GSKCERCW + T VG   E   +C RCYEVL
Sbjct: 885 ADGSKCERCWKFDTMVGKNEESLNVCPRCYEVL 917


>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466497|sp|A0AKC5.1|SYI_LISW6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 921

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L+E      + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+P L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLPNLREKLGFEDATVVKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L IL
Sbjct: 286 VRGSELDRIVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEIL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FT+EA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTDEAPGFEGV-FYDTANKMVTEKLEEVGALLKMEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   + A+  V W P
Sbjct: 404 FRATAQWFASIDAFRDDLLKAVKGVNWTP 432



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 189/333 (56%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV     +++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSNDRRAMQTVFYEAAVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLP- 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K           W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 784 -DVKVLADSEEITAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P S        ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPESA----FKSNQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG   +HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVDPKHPTLCGRCADIV 915


>gi|355558756|gb|EHH15536.1| hypothetical protein EGK_01641 [Macaca mulatta]
          Length = 941

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 192/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 125 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 184

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  S  L+   P +   VWTT PWT+PAN AV    +
Sbjct: 185 ELEYNPEHVSRSIYVKFPLLKPSPKLSSFLDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 243

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 244 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 281 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 340

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 341 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 400

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 401 VVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK-LRGTLRYLLGNLHDWR-VGNSI 393
           P YGAD      S +       + P     + D + K LR TLR+LLGN+ D+    +SI
Sbjct: 617 PPYGADQSAHPCSMLPEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSI 676

Query: 394 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY
Sbjct: 677 PVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLY 736

Query: 454 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF +
Sbjct: 737 CEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRT 790

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            W      W+             LE   E    +  +  G + G +      +   +  L
Sbjct: 791 GWISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGL 840

Query: 574 ASRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD--- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D   
Sbjct: 841 LFEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIRE 900

Query: 626 ----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 901 ESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 939


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 205/333 (61%), Gaps = 36/333 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           +EY E   + SIY  F ++      S L + +    + + +WTTT WT+P N A+A+NA 
Sbjct: 199 IEYQEDR-TYSIYVKFEVIDDKRLFSNLPIGD--KKVYIVIWTTTTWTLPGNLAIALNAD 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y++++I                  GN +       ++VAS+LV  +      K+    
Sbjct: 256 FDYSLIDI------------------GNEI-------LVVASELVERVMK--TNKIEQYH 288

Query: 182 TLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    KY 
Sbjct: 289 EIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQKYN 347

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           +P++ PVD++G  T+EAGKF+GL    D N  + K L+   +L+  E   H+YP+ WR K
Sbjct: 348 IPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELENSGNLLGVEKITHQYPHCWRCK 406

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 407 NPVIFRATEQWFASVKGFREEALKAVDSVKWVP 439



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 127/333 (38%), Positives = 197/333 (59%), Gaps = 38/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLFDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RR+ QTV+   L+++ ++IAPIL   AE++WQN+  AY  E+    E VF + WP
Sbjct: 739 SESLDRRAAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AYKEEN---VESVFLTSWP 793

Query: 517 VLDE---KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            ++E   K  T        W KI+E++  V K LE+AR  KLIGSSL++KV +F     +
Sbjct: 794 KVNEGILKDETLREK----WDKIIEIKDIVAKQLEIARNEKLIGSSLDSKVKIFA--KGI 847

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             R       K + D +Q + I+SQ+EV                       D++ + V +
Sbjct: 848 DKRF-----IKENKDIIQEVLIVSQLEVEEGDS------------------DQMKVEVYK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+GSKCERCW + T VG   E   +C RCYEVL
Sbjct: 885 ADGSKCERCWKFDTMVGKNEESLNVCPRCYEVL 917


>gi|291542661|emb|CBL15771.1| Isoleucyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 921

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 195/333 (58%), Gaps = 37/333 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+ PY+TL+ E+EA QI VF +M+ +GYIY+G KPV+W P  +TALAEAE+
Sbjct: 143 FKRLGVIGEWDKPYITLNHEFEAEQIRVFAEMATKGYIYKGLKPVYWCPECKTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVAVNA 120
           EY E     SIY  F +        G+ +    D   +   +WTTT WT+PAN A+ V  
Sbjct: 203 EYAEDPC-HSIYVKFNVT----DDKGVFSNMGIDPSKVKFVIWTTTTWTLPANVAICVGP 257

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
           + +Y+V++      GD                     ++++AS+L  +   + G T   +
Sbjct: 258 RFEYSVIKT-----GDE--------------------YLVMASELYKSALDEAGITDFEV 292

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY-G 238
             T+ GS+LE  +  HP  +R+  +VI G+++T ESGTG VHTAPGHG +DY     Y  
Sbjct: 293 VATVKGSELEYIKTAHPFLDRE-SLVIVGEHVTLESGTGCVHTAPGHGVDDYNVCQNYPE 351

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           +PI+ PVD  G  TEEAG+F+GL    + N  +  YL+E  SL   +   H+YP+ WR K
Sbjct: 352 IPIICPVDSNGVLTEEAGQFAGL-TTDEANKKIAAYLEENGSLFALKKIVHQYPHCWRCK 410

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            P +FRAT+QWF SV+ F+  A+DAI  VKW+P
Sbjct: 411 TPILFRATDQWFCSVDDFKDEAVDAINTVKWIP 443



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/347 (37%), Positives = 192/347 (55%), Gaps = 50/347 (14%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + PQ+    YGADVLRLWV+S DY  DV I   +L+Q+S+ YRK+R T RY+LGN+ D+ 
Sbjct: 614 ISPQDVIKQYGADVLRLWVASTDYQTDVHISKDILKQISESYRKIRNTARYILGNISDFN 673

Query: 389 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + + +D +  ID++AL +L +++  +R SY++Y+F  ++  I  F +VD+SNFY DV
Sbjct: 674 PDTDMVDFDKVLPIDKWALAKLNDLITKVRTSYDNYEFHIVYHSIHNFCVVDMSNFYLDV 733

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLYT    S +RR+ QTV+   L ++ R+IAP+L + ++++W+ +P +        A
Sbjct: 734 LKDRLYTEKADSLSRRAAQTVIYVILDAMTRMIAPLLAYTSDEIWKYMPHS----SNENA 789

Query: 508 EFVFESKWPV-----LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA 562
           E V  ++ P      +D+K+       + FW +I ELR  V K LE     K I  SLEA
Sbjct: 790 EHVIFNEIPENIAIDVDDKF-------MAFWDRIHELRDNVKKSLESLIKDKTIKGSLEA 842

Query: 563 KVYLFTDDASLASRLR---EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
           KV L     +L    +   E+C A          FI+S+VE+                  
Sbjct: 843 KVTLCAGGETLEFLKKAEPELCAA----------FIVSKVEI------------------ 874

Query: 620 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V+   ++ I   +AEG KCERCW  S  VG   EHPT+C RC + L
Sbjct: 875 -VDNGGELEIKPEKAEGEKCERCWAISKTVGQCAEHPTICFRCVQNL 920


>gi|291460834|ref|ZP_06600215.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380424|gb|EFE87942.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 398

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 211/339 (62%), Gaps = 26/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+   
Sbjct: 82  PSDVIKVYGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPK 141

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + ++Y D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 142 TDKVAYKDMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIK 201

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RR+ QTV+   L+++ +++APIL   AE++W+++P A T E    AE 
Sbjct: 202 DRLYTEKKDSIARRAAQTVMYEILMTLTKMVAPILSFTAEEIWESIP-AETRE----AES 256

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           +F + W V ++++    + E   W +I++LR EVNK LE AR G  K+IG+SL+AKV L+
Sbjct: 257 IFLADWYVNNDEYLNPELDEK--WQQIIKLRKEVNKKLEKARQGENKIIGNSLDAKVSLY 314

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T+D +L   ++E      + + L+ +FI+S +EV+ S+ +              E  + +
Sbjct: 315 TEDNALKEFIKE------NLELLETVFIVSDIEVVDSSDDNFT---------AAEEIENL 359

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I ++ A+G KCERCW Y   +G+  EHPTLC RC  VL
Sbjct: 360 KIKITHADGEKCERCWKYD-DLGTDPEHPTLCPRCTGVL 397


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/334 (44%), Positives = 205/334 (61%), Gaps = 38/334 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVWTTTPWTVPANAAVAVNA 120
           +EY E   + SIY  F ++         LN  + D  + + +WTTT WT+P N A+A+NA
Sbjct: 199 IEYQEDR-TYSIYVKFEVID---DKGLFLNLPIGDKKVYIVIWTTTTWTLPGNLAIALNA 254

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
              Y++V+I                  GN +       ++VAS+LV  +      K+   
Sbjct: 255 DFDYSLVDI------------------GNEI-------LVVASELVERVMK--TNKIEQY 287

Query: 181 KTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
           + +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    +Y
Sbjct: 288 QEIARFKGKDLEYIKCKHPFLDRS-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQRY 346

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            +P++ PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ WR 
Sbjct: 347 NIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEASGHLLGVEKITHQYPHCWRC 405

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 406 KNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 200/333 (60%), Gaps = 38/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I  ++++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKEIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 DLKEIDRWALQRLYMLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AFKEED---AESVFLTSWP 793

Query: 517 VLDE---KWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            +DE   K  T        W KI+E++  V K LE+AR  KLIGSSL++KV +F     +
Sbjct: 794 KVDEGILKDETLREK----WNKIIEIKDIVAKQLEIARNEKLIGSSLDSKVKIFA--KGI 847

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             R  E      + D +Q + I+SQ+EV     N                  ++ + V +
Sbjct: 848 DKRFIE-----ENKDIIQEVLIVSQLEVEEGDEN------------------QIKVEVYK 884

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+GSKCERCW + T VG   E   +C RCYEV+
Sbjct: 885 ADGSKCERCWKFDTMVGKNEESLNVCPRCYEVV 917


>gi|410925971|ref|XP_003976452.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Takifugu
           rubripes]
          Length = 1001

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 196/331 (59%), Gaps = 26/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F+R+GV ADW+N Y T    YEAAQ++VF +M  +G+IY+  KPV WSPSSRTALAEA
Sbjct: 186 AAFQRWGVMADWDNCYYTHHGVYEAAQLQVFQEMHSKGFIYQDHKPVFWSPSSRTALAEA 245

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSR+IYA F + +APP+    ++  L  + + VWTT PWT+PAN AV    K
Sbjct: 246 ELEYNAHHVSRAIYATFPLTTAPPNIGSDVD--LDGVSVLVWTTQPWTIPANQAVCYMPK 303

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            QY+VV+       DSA               QK   +++A++   +L +  GT+L    
Sbjct: 304 AQYSVVK-----RADSA---------------QK---LLLATERTASLSSLLGTELETVG 340

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL GS LE     HP+       ++  +++T   GTGLVHTAP HG +DY  +  + L +
Sbjct: 341 TLTGSQLEGGICRHPLVPDSFVPLLPANHVTMVKGTGLVHTAPAHGMDDYSVASNFNLSV 400

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G+FTE AG +   L V+ +G   V+  L +  +L+ EEP  H YPYDWRTK+P
Sbjct: 401 ECLVDEDGRFTELAGAELQDLAVMSEGTDKVISMLRDCGALVKEEPCVHSYPYDWRTKQP 460

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I R + QWF +    +  A +A+ +V  +P
Sbjct: 461 VIIRPSRQWFINTASLKDKAKEALQKVHILP 491



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 155/345 (44%), Gaps = 38/345 (11%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 394
           P YGADVLR W +  +   ++ IG  VL    D   KLR +LR+LLGNLH +     +++
Sbjct: 677 PPYGADVLRWWAAESNMFSEIHIGANVLNSARDSINKLRNSLRFLLGNLHGFNPQVQAVA 736

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             D+  IDQY L  L      + ++Y  +   ++ +++Q FI  DLS+FYF + KDRLY 
Sbjct: 737 PADMHYIDQYMLHLLHKYSIKVTDAYSEFDAGRVIRVLQAFITSDLSSFYFSIIKDRLYC 796

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
               S  RRSCQTVL   L  + R +AP+LPHLAE+V+ + P          A+ +F S 
Sbjct: 797 DPDDSLGRRSCQTVLEKVLDGVTRSMAPVLPHLAEEVYLHSP------GHEEAQSLFRSG 850

Query: 515 WPVLDEKWRTFPV-----GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           W      W    V     G        L      N V          G   E    L  +
Sbjct: 851 WIQSTSVWLRPGVEEMVEGACAIRDSFLSSIPGKNPVTYDVTIAIQPGLLFELMECLQAE 910

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEV-LPSTPNGLIRNIPYSGEYLVEGKDKVW 628
             S +S+L E+  A        R+ + SQ+   LP  P+ L+ +    G +L+  +  V 
Sbjct: 911 ATSTSSQLAELMMAA-------RVNLTSQLPCDLP--PDALLSH----GTFLINLEGGVI 957

Query: 629 -------IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                  +      GS+C RC   + +        +LC RC  VL
Sbjct: 958 RENSAYSVAAVPTSGSRCPRCRRCTAESVD-----SLCPRCRTVL 997


>gi|366086109|ref|ZP_09452594.1| isoleucyl-tRNA synthetase [Lactobacillus zeae KCTC 3804]
          Length = 928

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 194/329 (58%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMGDWEHPYITLHHAYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       GLL++   D  L +WTTTPWT+PAN  +AVN +  
Sbjct: 199 EYHDDK-SPSIYVAFPVVDG----KGLLDQ---DTSLVIWTTTPWTIPANYGIAVNPRFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  V++     GD                       +VA++L+  +  + G  +  I KT
Sbjct: 251 YVQVQV-----GDHK--------------------YVVAAELLDRVAEEIGWDQPKILKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+ ++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP++
Sbjct: 286 FKGTAMDKMTAKHPLYDRTS-LVMEADHVTLDAGTGLVHTAPGHGEDDYKVGMKYGLPVI 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           S VD +G   E A  F G+    D N  + K L E+ +L+  + + H YP+DWRTKKP I
Sbjct: 345 SVVDAKGYMNENAPGFEGV-FYDDANKLITKALTEKGALLKLDFFTHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFASVE FR   + AI  V + P
Sbjct: 404 FRATTQWFASVEAFRDQILKAIDTVDFKP 432



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 181/342 (52%), Gaps = 35/342 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R TLR+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I+YDDL  +D+Y + +L  ++  ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 QKDAIAYDDLGSVDRYLMVRLNQVIAKVKAAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW----QNLPFAYTLEDG 504
           KD +Y        RRS QTV+   LL + +++ PILPH AE+VW    Q+  +A   +  
Sbjct: 723 KDVVYIEAQNDPKRRSMQTVMYTALLDLTKLLTPILPHTAEEVWPYLKQDTAYAALSDMP 782

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
               F  E +  +LD             W   ++ R+EV K LEVAR  K+IG S+EA V
Sbjct: 783 DVTHFDDEDQ--LLD------------IWSAFMDFRSEVQKALEVARDNKVIGKSMEAAV 828

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++      +  +R+M     +A+ +Q + I S  EV PS         P + E      
Sbjct: 829 TVYP-----SGPVRDMLD-DVEANVMQ-LLITSHFEVAPSDAKA-----PANAEQF---- 872

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + + + V+ A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 873 EDMAVVVTHAKGEVCPRCRMVRTDIGTDPKLPELCSRCAAIV 914


>gi|332164770|ref|NP_001193724.1| isoleucyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 1012

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 190/331 (57%), Gaps = 27/331 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEAE
Sbjct: 198 SFIRWGIMADWNNCYYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAE 257

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   H+SRS+Y  F ++   P  + LL+   P +   VWTT PWT+PAN AV    + 
Sbjct: 258 LEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSP-VSFLVWTTQPWTIPANQAVCYMPES 316

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV+  S   GD                       I+ +D V ++ +  GT   +  T
Sbjct: 317 KYAVVKCSS--SGD---------------------LYILGADKVTSVASTLGTTFEVIST 353

Query: 183 LAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +G DLEN    HP +  R+ P ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 354 FSGVDLENGSCAHPLISERESP-LLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLST 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G  AV+  L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 473 VVIRASKQWFVNITDIKTTAKELLKKVKFIP 503



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 169/344 (49%), Gaps = 36/344 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
            P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 689  PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749  VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+          + VF + 
Sbjct: 809  ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIPYI------KEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WIKTSSIWKK----------PGLEEAIESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P G+  ++    G +L+  EG D    
Sbjct: 913  FEIMEMLQAEETSSTSQLNELMMASQTTLLSQEPRGISEDVTELKGTFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               KV +  +  E  KC RCW Y+ +        TLC RC EV+
Sbjct: 973  SSYKVIVMTTTKE--KCPRCWKYTAESSD-----TLCPRCAEVV 1009


>gi|408790499|ref|ZP_11202118.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
 gi|408520223|gb|EKK20311.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
          Length = 933

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 196/332 (59%), Gaps = 33/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW++PYLTL PEYEAA+I VFG+M+ QG IY+G KPV WS SS +ALAEA
Sbjct: 137 AEFKRLGVTGDWDHPYLTLQPEYEAAEIRVFGKMAAQGLIYKGLKPVIWSWSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +     + +A   +        G+L+E  PD  + VWTTTPWT+PA+  V +   
Sbjct: 197 EIEYHDVESPSAFFAEKVL-----DGKGVLDE--PDTYMIVWTTTPWTIPASEGVTIAPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK- 180
            +Y+VV+                        D      ++A++L+      +G K V   
Sbjct: 250 FEYSVVQ-----------------------HDDDPNRYVLATELLQKDAELFGWKNVQTI 286

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT+ G  L+    +HP D  +  V + GD++T ++GTG+VHTAPG+G++DY+   +YGLP
Sbjct: 287 KTVPGRALDRITALHPFDENKQLVTMLGDFVTADAGTGMVHTAPGYGEDDYLIGKQYGLP 346

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +PVD++G  T+ AG  F+G+    D N   +  L +Q  LI   PY+H YP+DWRTKK
Sbjct: 347 IFAPVDNKGYLTKAAGPDFAGV-FYEDANQVALDKLKQQGQLIHYMPYKHSYPFDWRTKK 405

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I+RAT QWFASV+  R   + AI  V + P
Sbjct: 406 PVIYRATPQWFASVDQIRDQILAAIETVTFRP 437



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 180/333 (54%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD++RLWV+SVD   DV +  +  +++SD Y+K+R T+RYLL N  D+    +++SY+ 
Sbjct: 617 GADIVRLWVTSVDTDSDVRVSMENFKKVSDGYKKIRNTIRYLLANTSDFEPDEDAVSYEQ 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQ+ + +L  ++  +R +Y+ Y F  + + + +FI  DLS FY D AKD LY    
Sbjct: 677 LNPVDQFIMIKLNQLITEVRTAYDQYDFMTVNKKLFQFITGDLSAFYLDFAKDILYIDSA 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYT--LEDGSAAEFVFES 513
            S  RRS QTVL   L+ + +++ PI+PH  E++WQ L  P +Y    E  +A  F  E 
Sbjct: 737 NSQRRRSMQTVLYQSLVVLTKLLTPIIPHTTEEIWQFLAEPASYVQLTEMPTAEHFTNEE 796

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +               +  + + L+LR  V K +E AR  K+IG   EAK+ L+  +A  
Sbjct: 797 EC--------------LAQFDEFLKLRKAVLKAMENARNDKVIGKPSEAKLILYLTEADQ 842

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            +    +   K D   + +I ++SQ+         +I+ +  + E +    D++ I V  
Sbjct: 843 QA----LSNLKID---VAQILMVSQL---------VIKPVVSANEDVTSFGDRLAIEVQH 886

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A+G  CERC    T VGS  ++P  C+RC +++
Sbjct: 887 ADGETCERCRLIKTDVGSDPDYPDFCARCAKIV 919


>gi|355745904|gb|EHH50529.1| hypothetical protein EGM_01376 [Macaca fascicularis]
          Length = 941

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 125 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 184

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 185 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 243

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 244 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 281 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 340

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 341 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 400

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 401 VVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 164/346 (47%), Gaps = 37/346 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK-LRGTLRYLLGNLHDWR-VGNSI 393
           P YGAD      S +       + P     + D + K LR TLR+LLGN+ D+    +SI
Sbjct: 617 PPYGADQSAHPCSMLPEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSI 676

Query: 394 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY
Sbjct: 677 PVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLY 736

Query: 454 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF +
Sbjct: 737 CEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRT 790

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            W      W+             LE   E    +  +  G + G +      +   +  L
Sbjct: 791 GWISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGL 840

Query: 574 ASRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD--- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D   
Sbjct: 841 LFEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIRE 900

Query: 626 ----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 901 ESSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 939


>gi|422422735|ref|ZP_16499688.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
 gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 921

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 198/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L    P   + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+  L  K G +   I KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLAGLREKLGFEDATILKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDCVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGI-FYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   ++A+  V W P
Sbjct: 404 FRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLPE 784

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           + +   +  +     W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 785 VKDLADSEEI--TAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P +   +    ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPENALKV----NQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG    HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPNHPTLCGRCADIV 915


>gi|426333832|ref|XP_004028473.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Gorilla gorilla
           gorilla]
          Length = 1012

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLAPLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNMADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/328 (42%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV ADW+  Y+TL P +EA QI VFG+M+ +GYIY+G KPV+W  S  TALAEAE+
Sbjct: 140 FIRLGVRADWDRSYVTLMPHFEARQIGVFGEMAKRGYIYKGLKPVYWCASCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +      + GL      +  L +WTTTPWT+P N A++++ +  
Sbjct: 200 EYQDKK-SPSIYVRFPVA----DSKGLFPS--ENTYLVIWTTTPWTIPGNVAISLHPEYF 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y +V+I                          +V  IVA +L+ +     G +  + +  
Sbjct: 253 YVLVQI-------------------------GEVKYIVAKELLASFLELLGAQGTVLQEF 287

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
           AG++LE     HP+ +R   +VI G+++T E GTG VHTAPGHGQED+  + KYGLP++S
Sbjct: 288 AGAELERVVCRHPLLDRD-SLVILGEHVTLEQGTGCVHTAPGHGQEDFEAAKKYGLPVIS 346

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PV+ +G FT+E G FSG   L   N +V+  L E+  L+ +   +H+YP+ WR K    F
Sbjct: 347 PVNGKGVFTDEGGIFSGQFYL-KANQSVLDALTERGHLLFQAEIDHQYPHCWRCKSSIFF 405

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RATEQWFAS+EGFR+ A++ I +V+WVP
Sbjct: 406 RATEQWFASIEGFRRQALEEIRKVQWVP 433



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 192/329 (58%), Gaps = 21/329 (6%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSS DY  D+ +   +L+Q+S+ YRK+R T R+LL N++D+    + ++Y+ 
Sbjct: 617 GADILRLWVSSADYKSDLAVSQNILKQLSEAYRKIRNTCRFLLSNIYDFDPSADQVAYEK 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++AL +L  +++ +  +Y  Y+F  ++  I  F  VD+SN Y D+ KDRLYT   
Sbjct: 677 MVELDRWALLKLHRLIEKVLNAYHDYEFHVVYHAIHNFCTVDMSNRYLDIIKDRLYTSPA 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTVL   L ++VR++ P+L   +E++W+++P        S  E V  +  PV
Sbjct: 737 ESPDRRAAQTVLYLILDALVRLLTPVLAFTSEEIWKHMPRV-----ESRPESVQLADMPV 791

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E +    + +   W +I+ +R EV ++LE AR  K+IG+SLEA+V L+  +  L   L
Sbjct: 792 VNEAYLDLELEDK--WQRIMAVRNEVIRILEGARQEKVIGNSLEAQVDLYC-EKELHDFL 848

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
             +       D L  IFI+S   +  +     +  +   G  +V G   + + VSRA G 
Sbjct: 849 EPL------KDDLAAIFIVSVARLSNAGSEVPVHAV---GSEIVSG---LHVAVSRAPGG 896

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW Y   VG+ +EHP+LC RC  VL
Sbjct: 897 KCERCWMYHIAVGNDLEHPSLCPRCAGVL 925


>gi|332231893|ref|XP_003265129.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Nomascus
           leucogenys]
          Length = 1012

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 194/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETMS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAARELLKKVKFIP 503



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/344 (34%), Positives = 171/344 (49%), Gaps = 36/344 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVVIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               KV +  +  E  KC RCW Y+ +        TLC RC EV+
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVV 1009


>gi|422419644|ref|ZP_16496599.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
 gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
          Length = 921

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 198/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F++        G+L    P   + +WTTTPWT+PAN  + VN  L 
Sbjct: 199 EYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWTTTPWTIPANMGITVNPDLD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y V+E            A +K               +VA  L+  L  K G +   + KT
Sbjct: 251 YVVIE-----------SAGEK--------------YVVAEALLAGLREKLGFEDATLLKT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP  +R   +V+ G++ T E+GTG VHTAPGHG++D++   KY L +L
Sbjct: 286 VRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAPGHGEDDFLVGKKYNLEVL 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+DD G FTEEA  F G+      N  V + L+E  +L+  E   H YP+DWRTKKP I
Sbjct: 345 APLDDRGVFTEEAPGFEGI-FYDTANKMVTEKLEEVGALLKLEFITHSYPHDWRTKKPVI 403

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   ++A+  V W P
Sbjct: 404 FRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 191/333 (57%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV    ++++ +++APILPH  E+VW +L        G  AE +     P 
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSLI-------GEGAESIHLQDLPE 784

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           + +   +  +     W   +++R  V K LE AR  KLIG S+ AKV L+ D        
Sbjct: 785 VKDLAGSEEI--TAKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVD-------- 834

Query: 578 REMCTAKHDADTLQ----RIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                AK   D+L+    ++FI+S  E++       + N P +   +    ++V + ++ 
Sbjct: 835 ---GEAKTLFDSLEGDFAQLFIVSDFELVEG-----LENAPENALKV----NQVAVQITV 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG    HPTLC RC +++
Sbjct: 883 AEGETCERCRVVKKDVGVNPNHPTLCGRCADIV 915


>gi|67970170|dbj|BAE01429.1| unnamed protein product [Macaca fascicularis]
          Length = 940

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 125 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 184

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 185 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 243

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 244 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 281 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 340

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 341 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 400

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 401 VVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 617 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 676

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 677 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 736

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 737 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 790

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 791 WISTSSIWKK----------PGLEEAVESVCAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 840

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
             + EM  ++  + T  L  + + S+  +L   P  L  + I   G++L+  EG D    
Sbjct: 841 FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPRELTADVIELKGKFLINLEGGDIREE 900

Query: 626 ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 901 SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 938


>gi|397471288|ref|XP_003807228.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pan paniscus]
          Length = 1012

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 194/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V +  +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASAASTLETTFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL+G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TLSGIDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 171/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +    + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLRSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|384948138|gb|AFI37674.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
          Length = 1012

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         I+A+D V T+ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------ILAADKVETVASTLETAFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|423682086|ref|ZP_17656925.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
 gi|383438860|gb|EID46635.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
          Length = 922

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 207/331 (62%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEA
Sbjct: 138 AQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  +AV+ +
Sbjct: 198 EIEYHDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTTTPWTIPANLGIAVHPE 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
           L+Y+VV             A   +R             ++AS L+ ++    G +   + 
Sbjct: 250 LEYSVV-------------ATGGAR------------YVMASALIESVAKAIGFEDHEVV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL 
Sbjct: 285 QTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD++G  T EA  F GL      N  + + L+E+ +L+  +   H YP+DWRTKKP
Sbjct: 344 VLCPVDEKGHMTSEAPGFEGL-FYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 403 TIFRATAQWFASIKDFRDELLEAVKKTKWVP 433



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 192/338 (56%), Gaps = 34/338 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I+ +DL  +DQY L +L ++++ ++++YE Y F  I+  +  F  ++LS+FY D A
Sbjct: 664 AKDAIAVEDLREVDQYILIKLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD +Y        RRS QTV    LL++V++IAPILPH A+++W +  F    +  L D 
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLLALVKLIAPILPHTADEMWSHFTFVSEKSVQLTDM 783

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
                +  +K    +EK+ +F           ++LR +V K LE AR  K+IG S  A +
Sbjct: 784 PETRDIPNAK--ETEEKFDSF-----------MKLRDDVLKALETARNEKIIGKSSVASL 830

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+ ++ + A     + + K D   ++++FI+S++ +      G   + P   +    GK
Sbjct: 831 TLYPNEEAKAL----LSSIKED---VKQLFIVSELAI-----GGTEADAPEDAQSFETGK 878

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
               I V++AEG  CERC   S ++G   +HP LC RC
Sbjct: 879 ----IVVAQAEGETCERCRMVSKEIGEDPDHPELCPRC 912


>gi|145245972|ref|XP_001395235.1| isoleucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134079947|emb|CAK48431.1| unnamed protein product [Aspergillus niger]
          Length = 1005

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/345 (42%), Positives = 197/345 (57%), Gaps = 43/345 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 149 MKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E HVS +    + + S P   +   LL +   ++   +WTTTPWT+PANAA++V
Sbjct: 209 AELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISAVIWTTTPWTLPANAAISV 266

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI---IVASDLVPTLEAKWGT 175
           +  L Y +VE  +                G +L  Q ++     I+  DL   + A  G+
Sbjct: 267 HPSLDYTIVESDTQ---------------GYLLIAQSRLEYLEGILKEDLSVIVPAIPGS 311

Query: 176 KLVIKKT----LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY 231
           KL  + T      GSD E      P+        I  D++T +SG+GLVH APGHG EDY
Sbjct: 312 KLADQTTYRPLFKGSDAEP----QPI--------IAADFVTADSGSGLVHCAPGHGMEDY 359

Query: 232 VTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 286
              L  G+P  +PVDD GKFT++A      + SG  VL DGN AV++Y++ Q  LI +  
Sbjct: 360 EACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHR 419

Query: 287 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YEHKYPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 420 YEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 464



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 176/353 (49%), Gaps = 27/353 (7%)

Query: 325 GQVKWVPPQEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           G+ K     +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LL
Sbjct: 662 GKGKKQAENQAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLL 721

Query: 382 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
           G L D+R+ + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S
Sbjct: 722 GALSDFRLEDRLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFS 781

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 501
            FY +  KDRLYT    S +RR+ QT L      +  V+API P L E+ W++ P A   
Sbjct: 782 AFYMEAIKDRLYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEAIK- 840

Query: 502 EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
              +  E   +        +W+   +   Y    I+ + + V  + E AR  K +GSSL+
Sbjct: 841 ---THCEHPLKRIVSAPASEWQNQALEADY--QDIVAVNSVVKAIQEKARGQKQMGSSLQ 895

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQV------EVLPSTPNGLIRNIP- 614
           + V++     + +    E   A+  ++ L  +F++S V      E +P      IRN   
Sbjct: 896 SFVHIVLPHGATS----ESVFARLQSE-LPDVFVVSSVSLGAHEEPIPED----IRNAEW 946

Query: 615 -YSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            YS EY +    +  + V   + SKC RCW Y        E  T+C RC EV+
Sbjct: 947 QYSEEYELPSGGRGTVHVYTPQASKCPRCWRYVVPETEAAEE-TVCGRCEEVV 998


>gi|297661948|ref|XP_002809485.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pongo abelii]
          Length = 1012

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 194/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P + + VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLTSLIDGSSP-VSILVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V ++ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP +L    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSMLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749  INDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPKRRSCQTALIEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREITADVIELQGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3.1|SYI_THETN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 201/330 (60%), Gaps = 30/330 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW  PYLTLDPEYEA QIEVFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVRGDWEKPYLTLDPEYEAKQIEVFGEMAKRGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  FR+        G++ E L ++   +WTTT WT+PAN A+A+N + 
Sbjct: 199 IEYFD-ETSDSIYVKFRVRDDLGKFKGIV-EDLSNVYFVIWTTTTWTIPANLAIALNPEF 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKK 181
            Y++ +      GD                       I+A D++  +  + G     I  
Sbjct: 257 DYSLTKF-----GDEV--------------------YIIAKDMIEEVRKETGLGDYEILA 291

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G +LE  + VHP+ NR   VV+ G+++T ++GTG VHTAPGHG+ED++   +YGL  
Sbjct: 292 TFKGKELEGMKAVHPIYNRDSIVVL-GEHVTLDAGTGCVHTAPGHGEEDFLVGQEYGLEA 350

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+P+D++G FT++A  + GL    + N  + + L +  +L+ E+   H YP+ WR K P 
Sbjct: 351 LNPIDEKGYFTDKAPGYEGL-YYAEANKVIKEDLRKANALLAEKKITHSYPHCWRCKSPI 409

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 410 LFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/352 (37%), Positives = 211/352 (59%), Gaps = 25/352 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  V P E    YGADVLRLWV S DYT D+   P++L+Q++++YR
Sbjct: 594 VDGEGRKMSKSLGNV--VDPAEVIQEYGADVLRLWVVSADYTADMRTSPEILKQIAEVYR 651

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL+D+    + + Y++L  ID++AL++L  +VK + ES++ Y+F+  F 
Sbjct: 652 KIRNTARFLLGNLYDFDPDKDMLPYEELLEIDKWALYRLNRLVKQLTESFDKYEFYDFFH 711

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F +VD+S+ Y D+ KDRLYT    S  R++ QT L   L ++V+++AP+L   +E+
Sbjct: 712 PVHNFCVVDMSSLYLDILKDRLYTYPAKSKERKAAQTTLYIILDTLVKLMAPVLAFTSEE 771

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           +W ++      +  +  E V  + WP + E++    +  I  W K+ ++R +++K LE+A
Sbjct: 772 IWWHMKH----DRNNNFESVQLADWPQVKEEYDNPYI--IEKWEKLFDIRKDISKALEIA 825

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R+ K IG SL+A+V ++      +S L E      D   LQ +FI+S+V VL        
Sbjct: 826 RSEKKIGHSLDAQVDIYP-----SSELYEFFKGFED---LQYVFIVSKV-VLHDPQEVAP 876

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            N   S +Y ++      I V+RA G KCERCW YS  VG+  EHPT+C+RC
Sbjct: 877 ENAYVSEDYDLK------ITVTRAPGEKCERCWMYSETVGTIKEHPTICARC 922


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|404489033|ref|YP_006713139.1| isoleucyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|81825316|sp|Q65JV7.1|SYI_BACLD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|52348023|gb|AAU40657.1| isoleucyl-tRNA ligase IleS [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 207/331 (62%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEA
Sbjct: 138 AQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F +        G+L        + +WTTTPWT+PAN  +AV+ +
Sbjct: 198 EIEYHDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTTTPWTIPANLGIAVHPE 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
           L+Y+VV         +A  A                  ++AS L+ ++    G +   + 
Sbjct: 250 LEYSVV---------AAGGAR----------------YVMASALIESVAKAIGFEDHEVV 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAPGHG++D++   KYGL 
Sbjct: 285 QTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +L PVD++G  T EA  F GL      N  + + L+E+ +L+  +   H YP+DWRTKKP
Sbjct: 344 VLCPVDEKGHMTSEAPGFEGL-FYDQANKPITEQLEEKGALLKLDFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           TIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 403 TIFRATAQWFASIKDFRDELLEAVKKTKWVP 433



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 192/338 (56%), Gaps = 34/338 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I+ +DL  +DQY L +L ++++ ++++YE Y F  I+  +  F  ++LS+FY D A
Sbjct: 664 AKDAIAVEDLREVDQYILIKLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMDFA 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 504
           KD +Y        RRS QTV    LL++V++IAPILPH A+++W +  F    +  L D 
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLLALVKLIAPILPHTADEMWSHFTFVSEKSVQLTDM 783

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
                +  +K    +EK+ +F           ++LR +V K LE AR  K+IG S  A +
Sbjct: 784 PETRDIPNAK--ETEEKFDSF-----------MKLRDDVLKALETARNEKIIGKSSVASL 830

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+ ++ + A     + + K D   ++++FI+S++ +      G   + P   +    GK
Sbjct: 831 TLYPNEEAKAL----LSSIKED---VKQLFIVSELAI-----GGTEADAPEDAQSFETGK 878

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
               I V++AEG  CERC   S ++G   +HP LC RC
Sbjct: 879 ----IVVAQAEGETCERCRMVSKEIGEDPDHPELCPRC 912


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|352684220|ref|YP_004896205.1| isoleucyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|350278875|gb|AEQ22065.1| isoleucyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
          Length = 934

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/395 (38%), Positives = 216/395 (54%), Gaps = 61/395 (15%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PY+T+ P +EA QI VFG+M+ +GYIY+GKK V+W P   TALAEAE+
Sbjct: 145 FKRLGVQGDWDHPYITMKPAFEAEQIRVFGEMAHKGYIYKGKKTVYWCPHCETALAEAEI 204

Query: 64  EYPEGHVSRSIYAVFRMVSA----PPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           EY +   + +IY    +V A    P    G          + +WTTTPWT+PAN AV VN
Sbjct: 205 EYAD-QKTPTIYVKIPLVDAKDKAPEGAQG------KKTSMVIWTTTPWTIPANVAVTVN 257

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
              +YA VE      GD                      +I+AS+LV  +  + G  ++ 
Sbjct: 258 PDFEYAWVEY-----GDEV--------------------LIMASELVGKVAEECG--IIF 290

Query: 180 KKTLA---GSDLE--NCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
            K L    G D+E   C +  P  N +  +V  GDY+  E+GTG VHTAPGHG  DY+T 
Sbjct: 291 GKVLGTTKGRDMEFMECEHPFPEYNHRKSLVCLGDYVDLETGTGCVHTAPGHGDVDYLTG 350

Query: 235 LKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           LKY L IL PVD++G +T+EAG+ F G  V  D N  V+K+L E   L+ ++   H+Y +
Sbjct: 351 LKYHLDILCPVDEKGCYTDEAGEAFKGHFVF-DSNGLVIKHLAETGHLLGKKSIHHQYAH 409

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP----------QEAPGYGADV 342
            WR K P I+RA+EQWF SV+GFR+ A+ AI   V+W+P           ++   +    
Sbjct: 410 CWRCKNPIIYRASEQWFCSVDGFREDALKAIDNDVQWIPSWGKARIHNMVRDRHDWCISR 469

Query: 343 LRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 372
            R+W     +   +  G+ +I P  +  ++ I+ K
Sbjct: 470 QRVWGVPIPIFYCEDCGEPLITPDTISHLAAIFEK 504



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 200/367 (54%), Gaps = 29/367 (7%)

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQ 361
           +RA      +++G  +    ++G    V PQ+    YGAD++RLWVSS DY GDV +  +
Sbjct: 594 YRAVLTHGYTLDGEGRKMSKSLGNT--VAPQDIIKDYGADIVRLWVSSTDYKGDVRVSKE 651

Query: 362 VLRQMSDIYRKLRGTLRYLLGNLHDWRVGN-SISYDDLPMIDQYALFQLENIVKNIRESY 420
           +++ +S++YRK+R T+RY+LGN  D+      + + ++  +DQ+AL +L+ + K++ ++Y
Sbjct: 652 IIKHVSEVYRKIRNTIRYILGNTSDFDAETMKVPFAEMEELDQWALMRLQELKKDVEKAY 711

Query: 421 ESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVI 480
           E+Y F  +   I  F  VD+S+FY D+ KDRLY        RRS QT +   L  ++ ++
Sbjct: 712 ENYDFHVVHHAIHDFCTVDMSSFYLDIIKDRLYASKKDDKKRRSAQTAMYEILSDLIVML 771

Query: 481 APILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELR 540
           APIL    E+V+Q     +  +   A E V   +WP L E++      ++  W   + +R
Sbjct: 772 APILSFTMEEVYQ-----FMKKPAGAPESVLMLEWPKLHEEY--LDKAKMEKWEHFIAIR 824

Query: 541 TEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVE 600
            E+ KVLE AR  K IG SL+AKV L+    +    L+ +         L  + I+SQ  
Sbjct: 825 GEITKVLENARREKTIGHSLDAKVDLYATGEAY-ELLKPL------EKDLPTLLIVSQAA 877

Query: 601 VLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCS 660
           +   T +G+              +D + + V+ AEG KCERCWNY   VG   +HPTLC 
Sbjct: 878 IHEGTDSGMKTE-----------RDDLTVAVAAAEGEKCERCWNYDPTVGKDPDHPTLCH 926

Query: 661 RCYEVLA 667
           RC EVL+
Sbjct: 927 RCIEVLS 933


>gi|301063341|ref|ZP_07203880.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442504|gb|EFK06730.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 932

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 188/332 (56%), Gaps = 30/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  +W+ PYLT++  YEA  +  FG+ +L G + R KKP++W  S +TALAEA
Sbjct: 138 AEFKRLGVLGEWDRPYLTMNYPYEATIVREFGKFALNGSLVRSKKPIYWCTSCKTALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY E H S SI+  F M+S       +       + + +WTTTPWT+PAN A+A++  
Sbjct: 198 EVEYDE-HSSPSIFVKFPMISDLAEVDPVFKG--KQVSVVIWTTTPWTLPANLAIALHPD 254

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y  VE                         + +V I+    L   +E        I K
Sbjct: 255 FPYVAVETA-----------------------ENQVMILAEGLLTECMETFGIASYEILK 291

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T   ++LEN    HP+  R   V++   Y+T ESGTG VHTAPGHG+EDY T LKYGL +
Sbjct: 292 TFHATELENLEARHPIYERPS-VIVLAPYVTLESGTGCVHTAPGHGREDYETGLKYGLEV 350

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            SPVDD G+FT +   FSG++V  + N +V+  L     L+ E+   H+YP+ WR KKP 
Sbjct: 351 YSPVDDAGRFTPDVEHFSGMEVF-EANRSVIDKLISLGVLVKEQKIAHEYPHCWRCKKPV 409

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFR+TEQWF S++  G R AA+ AI +V W+P
Sbjct: 410 IFRSTEQWFISMDKTGLRDAALKAINEVNWIP 441



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 195/359 (54%), Gaps = 33/359 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +A   + G V  +PP+     YGA++LRLWV+  DY  ++ +  ++L++++D YR
Sbjct: 597 VDGKGKAMHKSAGNV--IPPESLIKSYGAEILRLWVAGEDYRDNIRLSKEILQRLTDAYR 654

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           ++R T RYLLGNL D+    + + Y  +  +DQ+AL QL+ +   I  +YES++F  ++ 
Sbjct: 655 RIRNTCRYLLGNLQDYDPETDVVPYGQMDELDQWALHQLQGLNDRIMSAYESFEFHLVYH 714

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F ++DLS+FY D+ KDRLYT   T+ +RRS Q  ++  L ++VR++AP+L   A++
Sbjct: 715 HLHNFCVLDLSSFYLDIIKDRLYTSPQTAISRRSAQFAMNEILETLVRLMAPVLSFTADE 774

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKW---PVLDEKWRTFPVGEIYFWGKILELRTEVNKVL 547
           +WQ +          A  FV   K    P L  +W             I+ +R EV K L
Sbjct: 775 IWQYMGGKDRAPSVHADLFVPTKKEFVNPELANRWE-----------DIISVRKEVTKAL 823

Query: 548 EVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN 607
           E+AR  K+IG  L A V L      L+  LRE        D L+ IFI+S VE++     
Sbjct: 824 ELARKEKIIGHPLSAAVTL-----GLSKALREKLADY--VDRLKTIFIVSSVELVDVAE- 875

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            L + I        E    + + V+ +  +KCERCW + + VG   EHPT+C RC  VL
Sbjct: 876 -LEQGIE------SETVPGLKVLVAPSADTKCERCWIHDSSVGEDSEHPTICGRCRNVL 927


>gi|435853597|ref|YP_007314916.1| isoleucyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
 gi|433670008|gb|AGB40823.1| isoleucyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
          Length = 930

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 187/334 (55%), Gaps = 37/334 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GVW DW+NPY+TL PEYEA QI+VFG+M+L G ++RG KPVHW  +  TALAEA
Sbjct: 139 GQFKRLGVWGDWDNPYITLQPEYEAKQIDVFGKMALDGLLFRGLKPVHWCTNCETALAEA 198

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLL---NEFLPDLGLAVWTTTPWTVPANAAVAV 118
           E+EY E     SI+  F      P   G +    E   D  + +WTTTPWT+PAN A+++
Sbjct: 199 EIEY-EDINGPSIFVKF------PVKEGKVLGGEELTSDDYVVIWTTTPWTIPANQAISI 251

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKL 177
           +   +Y + E ++              R            ++ A +LV   +E       
Sbjct: 252 HPDFEYVIAETET-------------GR------------LVAAKELVAEMMEICDIEDY 286

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I     G +LE     HP  +R+ P+++G D++T E G+G VHTAPGHG EDYV   +Y
Sbjct: 287 KIAAEFKGEELEGVICNHPFFDRESPLILG-DHVTLEQGSGCVHTAPGHGHEDYVIGQEY 345

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            L + +P+DD+G FTEEAG+          N+ V + L E   L+     +H YP+ WR 
Sbjct: 346 DLDVYAPMDDKGVFTEEAGEDFVGKHYDKANIKVTELLKEDDLLMNLNFIDHSYPHCWRC 405

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           K P IFRATEQWFASVE  +  A+DA+ +V W P
Sbjct: 406 KNPVIFRATEQWFASVEDIKDEALDAVKEVDWYP 439



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/349 (36%), Positives = 208/349 (59%), Gaps = 32/349 (9%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           ++G V  V P E    YGAD+LRLWV+S ++  DV I  ++L + S++YR++R T RY+L
Sbjct: 605 SVGNV--VSPHEVIDQYGADILRLWVASSNFKEDVRISDKILSENSEVYRRIRNTARYIL 662

Query: 382 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
           GNL D+    ++++ ++L  IDQ+AL +L+ ++K   ++YESY+F K++  +  F  V++
Sbjct: 663 GNLSDFNPQEDAVASEELTEIDQWALMKLQELLKVAEDAYESYEFHKVYHAVHNFCTVEM 722

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
           S+FY DV KDRLYT       RRS QT +   L+++ +++APIL H AE++WQNLP    
Sbjct: 723 SSFYMDVLKDRLYTLAKDDRVRRSGQTAMYEILITLTKIVAPILVHTAEEIWQNLP---- 778

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
             +G  A+ +F + WP ++E++    + E   W K LE+R +++K +E+AR  K++G SL
Sbjct: 779 --EGKEAKSIFLTDWPEVNEEYLNDELAEK--WSKFLEIRKDISKAIELAREEKVVGHSL 834

Query: 561 EAKVYLF--TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGE 618
           +A V L+   D   L                L  + I+S + +  +TPN        + E
Sbjct: 835 DAAVKLYPTEDQHQLLDHF----------GNLAELLIVSDLTL--ATPNA-----EANEE 877

Query: 619 YLVEGKD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            L  G++  + + V++A G KC+RCWNYS  VG   EH  +C+ C EV+
Sbjct: 878 NLYTGQNTDIKVAVTQAPGEKCDRCWNYSPTVGQNEEHSDICAECLEVV 926


>gi|350637532|gb|EHA25889.1| hypothetical protein ASPNIDRAFT_212883 [Aspergillus niger ATCC
           1015]
          Length = 1524

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/342 (41%), Positives = 195/342 (57%), Gaps = 37/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 668 MKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 727

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E HVS +    + + S P   +   LL +   ++   +WTTTPWT+PANAA++V
Sbjct: 728 AELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISAVIWTTTPWTLPANAAISV 785

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL- 177
           +  L Y +VE  +                        + ++++A   +  LE      L 
Sbjct: 786 HPSLDYTIVESDT------------------------QGYLLIAQSRLEYLEGILKEDLS 821

Query: 178 VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           VI   + GS L +     P+    + +   +I  D++T +SG+GLVH APGHG EDY   
Sbjct: 822 VIVPAIPGSKLADQTTYRPLFKGSDAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEAC 881

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           L  G+P  +PVDD GKFT++A      + SG  VL DGN AV++Y++ Q  LI +  YEH
Sbjct: 882 LSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAVLEYVESQGLLITKHRYEH 941

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 942 KYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 983



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 175/353 (49%), Gaps = 27/353 (7%)

Query: 325  GQVKWVPPQEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
            G+ K     +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LL
Sbjct: 1181 GKGKKQAENQAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLL 1240

Query: 382  GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
            G L D+R+ + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S
Sbjct: 1241 GALSDFRLEDRLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFS 1300

Query: 442  NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 501
             FY +  KDRLYT    S +RR+ QT L      +  V+API P L E+ W++ P A   
Sbjct: 1301 AFYMEAIKDRLYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEAIK- 1359

Query: 502  EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
               +  E   +        +W+   +   Y    I+ + + V  + E AR  K +GSSL+
Sbjct: 1360 ---THCEHPLKRIVSAPASEWQNQALEADY--QDIVAVNSVVKAIQEKARGQKQMGSSLQ 1414

Query: 562  AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQV------EVLPSTPNGLIRNIP- 614
            + V++     +      E   A+  ++ L  +F++S V      E +P      IRN   
Sbjct: 1415 SFVHIVLPHGATG----ESVFARLQSE-LPDVFVVSSVSLGAHEEPIPED----IRNAEW 1465

Query: 615  -YSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             YS EY +    +  + V   + SKC RCW Y        E  T+C RC EV+
Sbjct: 1466 QYSEEYELPSGGRGTVHVYTPQASKCPRCWRYVVPESEAAEE-TVCGRCEEVV 1517


>gi|109018264|ref|XP_001099877.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 986

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 36/313 (11%)

Query: 368 DIYRKLRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFF 426
           D   KLR TLR+LLGN+ D+    +SI  +D+ +IDQY L  L+++   I E Y+ Y F 
Sbjct: 695 DDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLANKITELYKQYDFG 754

Query: 427 KIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPH 486
           K+ ++++ F   +LS+FYF + KDRLY        RRSCQT L   L  IVR  APILPH
Sbjct: 755 KVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPH 814

Query: 487 LAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           LAE+V+Q++P  Y  E  S    VF + W      W+             LE   E    
Sbjct: 815 LAEEVFQHIP--YIKEPKS----VFRTGWISTSSIWKK----------PGLEEAVESACA 858

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADT--LQRIFIISQVEVLPS 604
           +  +  G + G +      +   +  L   + EM  ++  + T  L  + + S+  +L  
Sbjct: 859 MRDSFLGSIPGKNAAEYKVIIVIEPGLLFEIIEMLQSEETSSTSQLNELMMASESTLLAQ 918

Query: 605 TPNGLIRN-IPYSGEYLV--EGKD-------KVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
            P  +  + I   G++L+  EG D       KV +  +  E  KC RCW Y+ +      
Sbjct: 919 EPREMTADVIELKGKFLINLEGGDIREESSYKVIVMPTTKE--KCPRCWKYTAESSD--- 973

Query: 655 HPTLCSRCYEVLA 667
             TLC RC EV++
Sbjct: 974 --TLCPRCAEVVS 984


>gi|380814548|gb|AFE79148.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
          Length = 1012

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 473 VVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809  EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1010


>gi|196008044|ref|XP_002113888.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
 gi|190584292|gb|EDV24362.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
          Length = 850

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/334 (43%), Positives = 192/334 (57%), Gaps = 27/334 (8%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SFKR+GV A+WN+ Y T D +YEA Q++VF +M  +GYIYRG KPV WSPSS+TALAE
Sbjct: 165 MKSFKRWGVMANWNDVYKTTDKDYEANQLQVFYEMYKKGYIYRGYKPVFWSPSSKTALAE 224

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE-FLPDLGLA-VWTTTPWTVPANAAVAV 118
           AELEY + + SR++Y  F + + P    G+  + FL +L  A VWTTTPWT+P N AV  
Sbjct: 225 AELEYKD-YTSRAVYVKFPVNTLPGGVFGIDGKAFLTNLTYALVWTTTPWTIPFNEAVCY 283

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +  L+Y   E     E                          V +DL+P +E    TKL 
Sbjct: 284 HPSLKYCFAENPKTAE-----------------------VYCVCTDLLPKVEDILNTKLT 320

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
              +  G +L+     HP+   +   ++ G ++T ESGTGLVHTAP HG +DY  S  Y 
Sbjct: 321 RFLSNIGQELDGMVCGHPLYRDKISPLLPGIHVTKESGTGLVHTAPAHGIDDYNISRIYE 380

Query: 239 LPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           L +   VD +G +TE+AG +  G  VLGDGN A ++ L +  +L+ E  Y H+YP+DWRT
Sbjct: 381 LSLDCAVDKDGLYTEDAGSELEGKYVLGDGNNAALELLRDSGNLLHESDYVHRYPHDWRT 440

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KKP I RAT+QWF    G  Q A   I  +K  P
Sbjct: 441 KKPVILRATKQWFTMTSGLMQQAKANIFSLKMYP 474



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 2/161 (1%)

Query: 337 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISY 395
           G GADVLRLWV++  Y  D+     +L +  +  RK+R + R+LLGNL+D+ +  N + +
Sbjct: 656 GLGADVLRLWVAASGYAADLSCSNSILERFGESLRKVRNSARFLLGNLYDFNIASNEVEH 715

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           + +  IDQY L +     ++   SY++ QF    + I  F+  DL+  YF+  KDRLY  
Sbjct: 716 NQMLEIDQYVLHRTLKFYEDTISSYDNMQFAPATRHIMNFVNTDLAT-YFEAIKDRLYAE 774

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 496
            +    RRS QT L   L  + R I P+ PHLAE++    P
Sbjct: 775 SSNGILRRSAQTSLFHILDVLTRAIGPVTPHLAEEICTFAP 815


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0.1|SYI_BACHD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/330 (46%), Positives = 202/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPY+TLD  +EA Q++VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FMRLGVRGDWWNPYVTLDKGFEAQQVKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F      P   G  N    D  + +WTTTPWT+PAN  +AV+ +L+
Sbjct: 199 EYHDKR-SPSIYVAF------PVKDG-KNVLQQDEKIVIWTTTPWTIPANLGIAVHPELE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y+VV +                      K +K V   VAS LV TLE+  +W    ++ +
Sbjct: 251 YSVVAV----------------------KGEKYV---VASGLVETLESALEWENPEIL-R 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G DLE     HP+  R   VV+ GD++T ++GTG VHTAPGHG+EDY+   KYGL +
Sbjct: 285 TIKGVDLEYVVAEHPIYGRDSLVVL-GDHVTLDAGTGCVHTAPGHGEEDYIVGQKYGLDV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL    + N  + + LDE  +L+      H Y +DWRTKKP 
Sbjct: 344 LCPVDDKGYMTAEAPGFEGL-FYDEANKPITQKLDECGALLKLTFITHSYAHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFAS+E FR   + AI +VKWVP
Sbjct: 403 IYRATAQWFASIENFRDELLRAIQEVKWVP 432



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 201/358 (56%), Gaps = 30/358 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  +P       GAD+LRLWV+SVDY  DV +  ++L+Q+S++YR
Sbjct: 586 TLDGEGKKMSKSLGNVV-IPNDVMKQLGADILRLWVASVDYQADVRVSDKILKQVSEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNLHD+    + ++ D L  +D+Y L +L +++  ++++Y+ YQF  ++ 
Sbjct: 645 KIRNTYRFLLGNLHDFHPATHRVAIDQLNGLDRYMLAKLNDVINRVKKAYDEYQFSTVYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  ++LS+FY D+AKD LY        RR+ QTV+   L+++ ++++PI+PH A++
Sbjct: 705 ELHNFCTIELSSFYMDIAKDTLYVKHADHPDRRATQTVMYDVLVALAKLLSPIIPHTADE 764

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI-YFWGKILELRTEVNKVLEV 549
           VW+++P       G   E V  +  P   E      V E+   W   + +R +V K LE 
Sbjct: 765 VWKHIP-------GVEEESVQLTDMP---EPIELGDVSELKQKWDAFINVRDDVLKALEN 814

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K+IG SL A + L+  D  +   L E+         L ++FI+S V+V      G 
Sbjct: 815 ARNEKVIGKSLTAAITLYA-DGDVRQLLEELG-------PLDKLFIVSAVKVA-----GS 861

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           + + P       E  D + I V +A G  CERCW  S  VG+  EHPTLC+ C E +A
Sbjct: 862 VADAPKEA----ESYDDLAIVVEKAVGETCERCWVVSPTVGTNNEHPTLCADCAETVA 915


>gi|385799639|ref|YP_005836043.1| isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
 gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 931

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 192/330 (58%), Gaps = 32/330 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GVW +W+NPYLTL+ EYE  QIEVFG+M+ +   YRGKKPVHW P   TALAEAE+
Sbjct: 141 FKRLGVWGEWDNPYLTLNKEYEVKQIEVFGEMAKKDLFYRGKKPVHWCPHCETALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           E+ E     SIY  F ++         L+    D  + +WTTTPWT+P+N A+  + +  
Sbjct: 201 EHGEDRAP-SIYVKFPLIDEFEVGGVELSS--EDSYIVIWTTTPWTIPSNMAITFHPEFP 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK--LVIKK 181
           Y VVE     EGD                      +++A DLV T+ A    +   +I +
Sbjct: 258 YVVVEA----EGDK---------------------LVMAKDLVETVMANSEIEDYEIISE 292

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +   LEN +  HP+ +R+  ++I G+++T + G+G VHTAPGHG +DY+   +YGL I
Sbjct: 293 EFSAKKLENKKAKHPIIDRE-SLLILGEHVTLDQGSGCVHTAPGHGHDDYIVGQEYGLEI 351

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            +P+D++G FTEEAG F+G     + N+ V   L E+  L+     +H+YP+ WR K   
Sbjct: 352 YAPMDNKGYFTEEAGDFAG-KYYDEANIMVTDKLKEKDLLMNLNFIDHQYPHCWRCKGNL 410

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT+QWFAS++  ++  + AI  V W P
Sbjct: 411 IFRATDQWFASIDAIKEETLAAIADVDWYP 440



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 198/337 (58%), Gaps = 23/337 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWV+S D+  D+ +   +L+Q S+ YR++R T R++LGN+ D+   
Sbjct: 613 PHKVIDQYGADILRLWVASSDFKNDIRVSDNILKQSSEAYRRIRNTYRFILGNISDFDSD 672

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N + Y+D   +D++ + +L++++K I  +YESY++ +++  +  F  V++S+ Y D+ K
Sbjct: 673 QNYVEYEDRRELDRWIMIRLQDLIKKITSAYESYEYHRVYHDVHNFCTVEMSSLYMDITK 732

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT GT S +RRS Q+ L   L++++  +API+PH +E+VWQ LP     E   A E 
Sbjct: 733 DRLYTDGTDSLSRRSAQSTLYDILMALMVTLAPIVPHTSEEVWQFLP-----EKMKAEES 787

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           VF + WP + + +  +    I  W K+L +R +V+K LE+AR  K IG+SLEA V L   
Sbjct: 788 VFLTDWPEVKKNY--YDQELIAKWDKLLAIRKDVSKALELARADKKIGNSLEAMVELKGS 845

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
             S    L      K + + L  +FI+SQ E+     + L  +  + GE     +  V +
Sbjct: 846 SESQEQLL------KSEIEQLADLFIVSQAEL----NDNLTADNTHQGE-----ESSVLV 890

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            VS A+G KC+RCW Y   VG   EH  +C RC +V+
Sbjct: 891 KVSEAKGEKCDRCWKYDQTVGEIEEHEDICHRCADVI 927


>gi|94730584|sp|Q4R646.2|SYIM_MACFA RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
          Length = 993

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 178 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 237

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 238 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 296

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +   T      
Sbjct: 297 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLETAFETIS 333

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 334 TFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 393

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 394 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 453

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 454 VVIRASKQWFINIADIKIAAKELLKKVKFIP 484



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 670 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 729

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 730 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 789

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 790 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 843

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 844 WISTSSIWKK----------PGLEEAVESVCAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 893

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
             + EM  ++  + T  L  + + S+  +L   P  L  + I   G++L+  EG D    
Sbjct: 894 FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPRELTADVIELKGKFLINLEGGDIREE 953

Query: 626 ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 954 SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 991


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 205/336 (61%), Gaps = 42/336 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLAVWTTTPWTVPANAAVAV 118
           +EY E   + SIY  F +     +  GL +  LP     + + +WTTT WT+P N A+A+
Sbjct: 199 IEYQEDR-TYSIYVKFEV----ENDKGLFSN-LPIGDKKVYIVIWTTTTWTLPGNLAIAL 252

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA   Y++V++                  GN +       +IVAS+LV  +      K+ 
Sbjct: 253 NADFDYSLVDV------------------GNEI-------LIVASELVERVMK--TNKIE 285

Query: 179 IKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
               +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    
Sbjct: 286 QYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQ 344

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ W
Sbjct: 345 RYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELESSGHLLGVEKITHQYPHCW 403

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 404 RCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 200/331 (60%), Gaps = 34/331 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFDPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTKLIAPILSFTAEEIWQNI--AFKEED---AESVFLTSWP 793

Query: 517 VLDEK-WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            ++E   R   + E   W KI+E++  V K LE+AR  KLIGSSL++KV +F     +  
Sbjct: 794 SINEGILRDEALREK--WDKIIEIKDTVAKQLEIARNEKLIGSSLDSKVKIFA-KGDIKR 850

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            + E      + D +Q + I+SQ+EV                       D++ + V +A+
Sbjct: 851 FIEE------NKDIIQEVLIVSQLEVEEGDS------------------DQIKVEVYKAD 886

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           GSKCERCW + T VG   E   +C RCYEV+
Sbjct: 887 GSKCERCWKFDTMVGKNEESLNVCPRCYEVV 917


>gi|67525809|ref|XP_660966.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
 gi|40744150|gb|EAA63330.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
          Length = 1518

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/343 (41%), Positives = 201/343 (58%), Gaps = 39/343 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 665 MNGFRSFVVMADWENHWKTMDKDFEKRQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAE 724

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY + HVS + +  F +V+ P   S L  + L    D+   +WTTTPWT+PANAA+A
Sbjct: 725 AELEYKDDHVSTAAFVKFPLVTVP---SHLKRDPLLQGKDISAVIWTTTPWTLPANAAIA 781

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           ++   QY +VE        SAA                  +++VA   +  LE      L
Sbjct: 782 IHPLFQYTIVE--------SAAHG----------------YLLVAQSRLEYLEFVLKEDL 817

Query: 178 -VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
            VI  ++ GS+L +     P+    N +   +I  D++T +SGTGLVH APGHG EDY  
Sbjct: 818 SVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTADSGTGLVHCAPGHGMEDYEA 877

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+   +PVDD GKFT+ A      + SG  VL DGNVAV++Y++ Q  L+ +  Y 
Sbjct: 878 CLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNVAVLEYIESQGQLLFQHRYG 937

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           H+YPYDWR+K+P I RATEQWFA V   + +A+ A+  V++VP
Sbjct: 938 HRYPYDWRSKQPIIIRATEQWFADVADIQSSALKALDDVQFVP 980



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 9/328 (2%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLW +S DYT DV++G QVL+ +     K R T + LLG L D+R  N + YD L
Sbjct: 1193 GPDALRLWAASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKVQYDQL 1252

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             ++D+ AL  L  +    R + E ++F+K    + R+  ++ S FY +  KDRLYT    
Sbjct: 1253 LLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLYTYAEN 1312

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            S +RR+ QT L      +  V+ PI P L E+ W++ P A      +A E          
Sbjct: 1313 SPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTPEALK----AAFEHPLRRTVSKP 1368

Query: 519  DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
            D +W+   +   Y   +I+ + + +  +LE AR  K  GSSL++ V++   + +  S L+
Sbjct: 1369 DPQWQDPSLSGDY--QEIVTVHSAIKSMLEKARGNKQTGSSLQSFVHIQLPNTATQSVLQ 1426

Query: 579  EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSK 638
                   D   +  + +    E LP T            E  + GK +V++   +A  SK
Sbjct: 1427 RKLEELPDIFVVSSVTLTGSEEALPDTIASADWQYSEEFELPIGGKGRVYVYSPQA--SK 1484

Query: 639  CERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RCW Y             C+RC EV+
Sbjct: 1485 CPRCWRYVIPQAEAAAD-KACNRCEEVV 1511


>gi|365903046|ref|ZP_09440869.1| isoleucyl-tRNA synthetase [Lactobacillus malefermentans KCTC 3548]
          Length = 933

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 195/330 (59%), Gaps = 33/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EA +I VFG+M+ +G IY+GKKPV WS SS +A+AEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAQEIRVFGEMAKKGLIYKGKKPVFWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y   ++V       G+L+  +    L VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDVTSPSAFYGE-KVVDG----KGILDNEV--TYLVVWTTTPWTIPASEGITVDANFD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKKT 182
           Y+VV+                        D+ +   ++A++LV     K+G K +   KT
Sbjct: 252 YSVVK-----------------------HDEDERQFVIATELVSEAAEKFGWKDIQTVKT 288

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L GS L+     HP    +  V + G+++T E+GTGLVHTAPG G +D+   +KYGL +L
Sbjct: 289 LKGSQLDRVLCQHPFYPERKLVTMLGNFVTLEAGTGLVHTAPGFGMDDWQVGMKYGLDVL 348

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G  T EAGK F G+    D N   +  L EQ  L+   PYEH YP+DWRTKKP 
Sbjct: 349 VPVDDKGFMTAEAGKDFEGV-FYDDANQIALDKLKEQNLLLDYMPYEHSYPFDWRTKKPV 407

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  +   + AI  V++ P
Sbjct: 408 IFRATPQWFASVDKIKDEILGAIDDVEFFP 437



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 176/337 (52%), Gaps = 27/337 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +     GA+++RLWVSSVD + DV +      ++SD Y+KLR TLRYLL N  D+   
Sbjct: 609 PAEVIKRMGAEIIRLWVSSVDSSADVRVSMDAFAKISDSYKKLRNTLRYLLANTSDFDPK 668

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N+++ DDL   D++ L +L + +  +   YE + F  I++ +  F+I DLS FY D AK
Sbjct: 669 TNAVADDDLESADKFMLIKLNDFISEVEADYEKFDFLNIYKKLMNFVITDLSAFYLDFAK 728

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D LY     S TRRS QTV    L+S+V+++ PILPH  E++W+ L       D S A F
Sbjct: 729 DLLYIDSVDSQTRRSMQTVFYKVLVSLVKLLTPILPHTTEEIWEFL-------DESEA-F 780

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  S+ P          V     W + ++LR  V KVLE AR  KLIG SL+A + ++  
Sbjct: 781 VQLSEMPEPTHLSNEETVKSN--WEQFMKLRGHVLKVLEEARDQKLIGKSLDASLTIYAS 838

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           + +   RL +      D D  Q I ++S++ V         +N+  +        +++ +
Sbjct: 839 EGT--KRLFDEL----DTDVRQ-ILMVSELNV---------KNLDEAPADAENFNNEISL 882

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V  A G  C+RC    T VG   ++P  C RC  ++
Sbjct: 883 TVKPAPGDVCDRCRLTKTDVGQDPDYPHFCERCAAIV 919


>gi|402297356|ref|ZP_10817128.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
 gi|401727406|gb|EJT00596.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
          Length = 924

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 202/330 (61%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPY+TLD  YEA QI+VFG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 141 FLRLGVRGDWWNPYITLDKAYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V    +  G       D    +WTTTPWT+PAN A++V+  L+
Sbjct: 201 EYHDKR-SPSIYVAFDVVDGKKALEG-------DEKFIIWTTTPWTIPANLAISVHPDLE 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VV +++          NK                +VAS L+ TL  E  W T  V+ K
Sbjct: 253 YSVVLVEN----------NK---------------YVVASGLLETLVKELDWATHEVL-K 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LE     HP+  R   VVI G+++T ++GTG VHTAPGHG++DY+   KYGL +
Sbjct: 287 TVKGSELEFVLTQHPIYER-TSVVILGEHVTLDAGTGCVHTAPGHGEDDYLVGQKYGLDV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T+EA  F GL      N  + + L+E  +L+      H Y +DWRTKKP 
Sbjct: 346 LCPVDDKGYLTDEAPGFEGL-FYDAANKPIGEKLEEVGALLKLSFITHSYAHDWRTKKPV 404

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFAS+E FR   + AI +V+W+P
Sbjct: 405 IYRATAQWFASIENFRSELLKAIEEVEWIP 434



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 189/338 (55%), Gaps = 35/338 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P       GAD+LRLWV+SVDY  DV +  ++L+Q+S+ YRK+R T R+LLGNLHD+  
Sbjct: 605 IPNDVMKQLGADILRLWVASVDYQADVRVSDEILKQVSESYRKIRNTFRFLLGNLHDFNP 664

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++ + L  ++ + L +L  +V+ ++ +YE Y F  ++ I+  F  ++LS+FY D+A
Sbjct: 665 TTDQVADEQLDGVNLFMLVKLNEVVEKVKTAYEEYNFSGVYHILHNFCTIELSSFYMDLA 724

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY   +    RR+ QTV+   ++ + ++I+PILPH A++VW+N+P           E
Sbjct: 725 KDTLYIEHSDHPARRAIQTVMYETVVKLSKLISPILPHTADEVWENIP-------NVDVE 777

Query: 509 FVFESKWPVLDEKWRTFPVGEI----YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
            V  +  P    + RTF  GE+      W + +++R++V K LE AR  K IG SL A +
Sbjct: 778 SVQLTDMP----EARTF--GEVEQLKATWNQFMDIRSDVLKALEQARNEKTIGKSLAAAL 831

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            ++           E     +    L+++FI+S+VE++        + +P+         
Sbjct: 832 TIYASG--------EKYELLNGISGLEKLFIVSKVELVNGVAEASEKAVPF--------- 874

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           + + + V+ AEG  CERCW  ST VG   +HP LC+ C
Sbjct: 875 EDLAVFVTAAEGETCERCWTVSTTVGEEADHPGLCTSC 912


>gi|347727024|gb|AEP19870.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. 11-28]
          Length = 908

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 193/329 (58%), Gaps = 37/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGLLADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F++V          + F+      +WTTTPWT+PAN  +AV+ +L 
Sbjct: 199 EYYDKK-SPAIYVAFQVVDG-KDVLATTDHFV------IWTTTPWTIPANLGIAVSDELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  +E                        D K    IVA  LV  +    G T   +  +
Sbjct: 251 YTRIE-----------------------HDGKGY--IVAETLVEDVTTALGWTDYTVSGS 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G + E+    HP+ +R   V+I GD++T ++ TGLVHTAPGHG++DY     YGL +L
Sbjct: 286 WNGREFEHMTAQHPLYDRTSLVMI-GDHVTADA-TGLVHTAPGHGEDDYRVGQAYGLDVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD G  TEEA  F GL    D N  +   L+E   L+  +  +H YP+DWRTKKP I
Sbjct: 344 CPVDDRGYMTEEAPGFEGL-FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVI 402

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +  I +V WVP
Sbjct: 403 FRATPQWFASIKDFRDDMLREIKEVNWVP 431



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 182/333 (54%), Gaps = 37/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQSDVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-- 515
               RR+ QTV+   ++++ +++APILPH A++VWQ +P          A+ VF +    
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP-------AKQADSVFLTDLDE 782

Query: 516 -PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
              L E  +      +  W K L  R +V K +E+AR  KLIG  LEAK+        L 
Sbjct: 783 VAALSEDEKAL----LAKWSKFLTFRDDVLKAIEIARGEKLIGKPLEAKL--------LV 830

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           +   E        D ++++  +SQ++ + S       ++ Y+            I V +A
Sbjct: 831 APKGETKQLLETIDNVRQLLQVSQLDYVESA------DVDYA---------TAEISVLKA 875

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +G+ C RCW YST++G   EHP LC RC EV+A
Sbjct: 876 DGAACARCWTYSTELGQNTEHPELCPRCTEVIA 908


>gi|212526158|ref|XP_002143236.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
           18224]
 gi|210072634|gb|EEA26721.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
           18224]
          Length = 1001

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 199/336 (59%), Gaps = 25/336 (7%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV ADW   Y TLD ++E +Q+ +F +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 142 MRGFQGWGVMADWEGHYKTLDKKFEMSQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAE 201

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S + +  F +V  P             L   +WTTTPWT+PANAA+A++ 
Sbjct: 202 AELEYNENHISTTAFVRFPLVKVPEQIRSNPLVDTDSLSAVIWTTTPWTLPANAAIAISE 261

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L Y +V  +S   G      ++ +   ++LK+  +V       LVP+++   G++L  +
Sbjct: 262 SLNYLIV--KSSNHGQLLIAESRLTYFQDMLKEDLQV-------LVPSIQ---GSELCQE 309

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T         R + P D  +   ++  D++T +SG+GLVH APGHG +DY   L  G+ 
Sbjct: 310 TTY--------RPLFPRDGIEEQPIVAADFVTADSGSGLVHCAPGHGMDDYEVCLAQGIR 361

Query: 241 ILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
             +PV+DEG+FT+EA        SG  VL +GN  V++Y++    L+ +  YEHKYPYDW
Sbjct: 362 AFAPVNDEGRFTDEAMPHKPSFLSGKSVLDEGNTLVLQYVESTNQLLNQHKYEHKYPYDW 421

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R+KKP I RATEQWFA V   R++A+ ++  V +VP
Sbjct: 422 RSKKPIIIRATEQWFADVANIRESALASLEDVTFVP 457



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 163/341 (47%), Gaps = 32/341 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           G D LRLWV+S DYT DV+IG QVL+ ++    K R T + LLG L D+    N   Y+D
Sbjct: 674 GPDALRLWVASSDYTRDVVIGQQVLQTVNTSLHKFRVTFKLLLGALGDFDPKVNMRQYED 733

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID+ AL QL  +V   R ++++++F+K    + R+  ++ S FY +  KDRLYT   
Sbjct: 734 LHKIDRQALMQLTRLVDTCRNAFDNFEFYKAVNALNRWANLEFSAFYMETLKDRLYTEAE 793

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RR+ QT L      +  V+API P L E+ W++ P           E V       
Sbjct: 794 NSASRRAAQTTLFYIYTYLQEVLAPITPLLVEESWEHTP-----------ELVKAQLEHP 842

Query: 518 LDEKWRTFP---VGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDA 571
           L    RT P   V E     +  ++   T V  + E AR+ K +GSSL++ V+    D+A
Sbjct: 843 LQRIARTTPTEWVDETISIDFIDLMAANTAVKVIQESARSKKQMGSSLQSFVHFELPDNA 902

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP-----YSGEY-LVEGKD 625
           S     R +         L  +F++S V +     N L   I      Y+ E+ L     
Sbjct: 903 SHDIFQRYLSE-------LPDLFVVSSVSLGVRGSNSLPSGIASAEWTYAEEFELPNSGK 955

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           K  + V     +KC RCW Y       VE   LC RC +V+
Sbjct: 956 KATVHVYAPNQAKCPRCWRY-VAPEPVVEEAPLCKRCDDVI 995


>gi|169785575|ref|XP_001827248.1| isoleucyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83775996|dbj|BAE66115.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391866160|gb|EIT75432.1| Isoleucyl-tRNA synthetase [Aspergillus oryzae 3.042]
          Length = 1006

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 196/338 (57%), Gaps = 29/338 (8%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V  DW N + T+D E+E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKGFRSFAVMGDWENHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS +    F ++S P   +      + DL   +WTTTPWT+PANA +AV+ 
Sbjct: 207 AELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANAVIAVHP 266

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVASDLVPTLEAKWGTKLV 178
            L+Y +V  QS   G      ++     ++LK+   V I  ++ S+L          +  
Sbjct: 267 DLEYTIV--QSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLGSEL--------ADRTT 316

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            +    G+D E      P+        I  D++T +SG+GLVH APGHG EDY   L  G
Sbjct: 317 YRPLFKGADAEP----QPI--------IAADFVTADSGSGLVHCAPGHGMEDYEACLSRG 364

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +   +PVDD G+FT++A      + SG  VL +GN  +++YL+ Q  L+ +  YEHKYPY
Sbjct: 365 ITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPY 424

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K+P I RATEQWFA V   R++A+ A+  +++VP
Sbjct: 425 DWRSKRPIIIRATEQWFADVGDIRESAVKALEDIRFVP 462



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 10/329 (3%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ N + Y+ L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLDNQVPYNQL 733

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              D+ AL  L  ++ + +++ E+++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 734 QQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYMEAIKDRLYTYGEN 793

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +   +API P L E+ W++ P A      S  E   +      
Sbjct: 794 SASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTPEAIK----SQCEHPLKRVVSTP 849

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
             +W+   +   Y    ++ + + +    E AR  K +GSSL++ V++        S  +
Sbjct: 850 ASEWQDDSLETDY--QDLVAVHSVIKNAQETARGKKEMGSSLQSFVHIVLPQGVNNSVFQ 907

Query: 579 EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSK 638
              T   D   +  + + +  E +P+T         YS EY +    K  + V   +  K
Sbjct: 908 RSLTELPDIFVVSSVTLGTSGEPIPATIAEA--EWQYSEEYELPSGQKGTVYVYTPQADK 965

Query: 639 CERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           C RCW Y        E  ++C RC +V++
Sbjct: 966 CPRCWRYVVPESQAEE--SVCDRCEDVVS 992


>gi|238506599|ref|XP_002384501.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220689214|gb|EED45565.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 1006

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 196/338 (57%), Gaps = 29/338 (8%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V  DW N + T+D E+E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKGFRSFAVMGDWENHWKTMDKEFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS +    F ++S P   +      + DL   +WTTTPWT+PANA +AV+ 
Sbjct: 207 AELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWTTTPWTLPANAVIAVHP 266

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVASDLVPTLEAKWGTKLV 178
            L+Y +V  QS   G      ++     ++LK+   V I  ++ S+L          +  
Sbjct: 267 DLEYTIV--QSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLGSEL--------ADRTT 316

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            +    G+D E      P+        I  D++T +SG+GLVH APGHG EDY   L  G
Sbjct: 317 YRPLFKGADAEP----QPI--------IAADFVTADSGSGLVHCAPGHGMEDYEACLSRG 364

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +   +PVDD G+FT++A      + SG  VL +GN  +++YL+ Q  L+ +  YEHKYPY
Sbjct: 365 ITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLESQGHLLSKHRYEHKYPY 424

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K+P I RATEQWFA V   R++A+ A+  +++VP
Sbjct: 425 DWRSKRPIIIRATEQWFADVGDIRESAVKALEDIRFVP 462



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 10/329 (3%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ N + Y+ L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLDNQVPYNQL 733

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              D+ AL  L  ++ + +++ E+++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 734 QQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYMEAIKDRLYTYGEN 793

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +   +API P L E+ W++ P A      S  E   +      
Sbjct: 794 SASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTPEAIK----SQCEHPLKRVVSTP 849

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
             +W+   +   Y    ++ + + +    E AR  K +GSSL++ V++        S  +
Sbjct: 850 ASEWQDDSLETDY--QDLVAVHSVIKNAQETARGKKEMGSSLQSFVHIVLPQGVNNSVFQ 907

Query: 579 EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSK 638
              T   D   +  + + +  E +P+T         YS EY +    K  + V   +  K
Sbjct: 908 RSLTELPDIFVVSSVTLGTSGEPIPATIAEA--EWQYSEEYELPSGQKGTVYVYTPQADK 965

Query: 639 CERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           C RCW Y        E  ++C RC +V++
Sbjct: 966 CPRCWRYVVPESQAEE--SVCDRCEDVVS 992


>gi|340517198|gb|EGR47443.1| hypothetical protein TRIREDRAFT_63935 [Trichoderma reesei QM6a]
          Length = 952

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 195/339 (57%), Gaps = 36/339 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FK + V A+W+N + T+D  +E  Q+ VF +M   G IYR  KPV+WSPSSRTALAE
Sbjct: 135 MKGFKSFAVMAEWDNKWTTMDRAFEIRQLRVFQKMVRSGLIYRKHKPVYWSPSSRTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS + Y  F ++S   S  G LNEF   L  A+WTTTPWT+PAN A+A++ 
Sbjct: 195 AELEYRDDHVSTAAYVRFPVMSDWSSVPG-LNEFKGRLYAAIWTTTPWTLPANKAIAMHD 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           +L YAV+++     GD                      ++VA   V  L+    +  VI 
Sbjct: 254 ELDYAVLQV-----GDDG--------------------LLVAESRVEVLQKNMPSAAVIA 288

Query: 181 KTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           K++ GS L+   Y + +      +  ++  D+++ +SGTGLVH APGHGQEDY     +G
Sbjct: 289 KSIPGSQLKGLMYRNKLRGSSSSLQPIVHADFVSADSGTGLVHMAPGHGQEDYQACSAFG 348

Query: 239 LPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           +   +P+ DEG FT EA         S   +L  G+ AV+  + E   ++     EHKYP
Sbjct: 349 IEAFAPITDEGHFTAEAYPDDPEKLTSAPSILEGGSQAVLDLVGED--VLWTHKLEHKYP 406

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTKKP + RAT QWFA VE  ++ A+ A+ +V++VP
Sbjct: 407 YDWRTKKPVVIRATAQWFADVESIKEDALQALSKVRFVP 445



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 178/361 (49%), Gaps = 44/361 (12%)

Query: 324 IGQVKWVPPQEAPG---------YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLR 374
           I + K +PP +  G          GAD +RLW +S D+T D+++G  +L+ + +   K R
Sbjct: 618 IMEGKLLPPLKTKGNDTTKRFDALGADAMRLWAASSDFTSDILVGASILQPIHNALIKYR 677

Query: 375 GTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQR 434
            TL+ LLG+LH      S     L  +DQ A+ QL++++  + E+Y +Y+F K   +I R
Sbjct: 678 TTLKMLLGSLH-----QSALQAPLTKLDQIAILQLQDVMAQVWEAYGNYEFHKATGLINR 732

Query: 435 FIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 494
           +I  DLS FY +  KDRLY G            VL   L   +R++API P L E+ W +
Sbjct: 733 WIATDLSAFYLEALKDRLYCGDGGG--------VLVPILYGFLRMLAPITPMLVEEAWSH 784

Query: 495 LPFAYTLEDGS---AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE-LRTEVNKVLEVA 550
            P ++  ED S    A  ++ S  PV+D    T    ++     +L  +   V   LE  
Sbjct: 785 RP-SWMAEDASFEHPARQLYNS--PVIDPARLTLDQAQLRRDLPVLSAVHDAVKAGLEQG 841

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K +GSSL+  V +   D  LA+ L          D L  +F++S VE+  +T   L 
Sbjct: 842 RESKALGSSLQCSVSISVTDGRLANVLERYL------DELDAMFVVSSVEL--NTSLSLE 893

Query: 611 R-NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           R +  YS E+ V+G   V + V   + SKC RCW Y+       E   LC RC +V+A  
Sbjct: 894 RPDWCYSKEFTVDGVQGV-VHVLPPKQSKCSRCWRYAAD-----EEEGLCGRCEDVVAAH 947

Query: 670 P 670
           P
Sbjct: 948 P 948


>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 932

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGENRK------------FVLAAELLDENAKRFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H    ++++ ++S +++        + + P   E      D + I V  A+G 
Sbjct: 843 ----FLDHLNTNVRQMLMVSALDL------HALSDAPADAETF---GDTLAIKVGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|448821700|ref|YP_007414862.1| Isoleucine--tRNA ligase [Lactobacillus plantarum ZJ316]
 gi|448275197|gb|AGE39716.1| Isoleucine--tRNA ligase [Lactobacillus plantarum ZJ316]
          Length = 932

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGENRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 180/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H +  ++++ ++S +++        + + P   E      D + I V  A+G 
Sbjct: 843 ----FLDHLSTNVRQMLMVSALDL------HALSDAPADAETF---GDTLAIKVGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|418275726|ref|ZP_12891049.1| isoleucine-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum NC8]
 gi|376009277|gb|EHS82606.1| isoleucine-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum NC8]
          Length = 932

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGENRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H    ++++ ++S +++        + + P   E      D + I V  A+G 
Sbjct: 843 ----FLDHLNTNVRQMLMVSALDL------HALSDAPADAETF---GDTLAIKVGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|377809541|ref|YP_005004762.1| isoleucine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
 gi|361056282|gb|AEV95086.1| isoleucine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
          Length = 929

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 200/330 (60%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ A+W+NPYLTL PE+EA +I+ FG+M+ QG IYRGKKPV WS SS +A+AEAE+
Sbjct: 139 FKRLGISAEWDNPYLTLMPEFEAEEIKTFGKMAEQGLIYRGKKPVFWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA  +++               D  + VWTTTPWT+PA+  V ++A   
Sbjct: 199 EYHDVTSPSAFYAE-KVIDGKDVLDN-------DTYVVVWTTTPWTIPASEGVTIDANFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YAVV+     EG+S                      +VA++L+ ++  K+G T +   K 
Sbjct: 251 YAVVQP----EGESRK-------------------FVVANELLSSVSEKFGWTNVKTIKL 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+L+     HP    +  VV+ G+++T ++GTGLVHTAPG G++D+  S +YGL I+
Sbjct: 288 VKGSELDRILVQHPFIEDRKLVVMLGNFVTLDAGTGLVHTAPGFGEDDFWVSKEYGLDIV 347

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G  T EAG  F G+    D N   +  L +   L++E PYEH YP+DWRTKKP 
Sbjct: 348 VPVDDKGVMTAEAGSDFEGV-FYEDANQIALDKLKDLNLLLLEMPYEHSYPFDWRTKKPV 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R + +DAI  VK+ P
Sbjct: 407 IFRATPQWFASVDKIRDSILDAITDVKFKP 436



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 174/345 (50%), Gaps = 42/345 (12%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV S+D + DV +  +   ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPEEIIQKMGAEIIRLWVLSIDSSSDVRVSQENFVKISDSYKKIRNTIRYLLANTSDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++  +L   D+Y L +   ++  + +SYE+Y F  +F+ +  F+I DLS FY D A
Sbjct: 667 KEDRVAVSELNTEDKYMLNRFNQVIGELNQSYEAYDFINVFKTLMNFMINDLSAFYLDFA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYT-LEDGS 505
           KD +Y     S  RRS QTV    L+ + + + P+LPH  E++W+ L  P  +  L D  
Sbjct: 727 KDVVYIEPAKSLKRRSMQTVFYDILVGLTKWMTPVLPHTTEEIWEYLKEPEEFVQLADLD 786

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           A + V E+                +  W K+ ++R++V K LE AR  KLIG S+EA++ 
Sbjct: 787 APQDVDETL---------------LKKWNKVRDIRSDVMKSLEEARDRKLIGKSMEAQLD 831

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           L+  D +       M   K     L+ I I+SQ+ +             +S E   E  D
Sbjct: 832 LYLSDEN-------MNLVKELGVDLRLILIVSQINL-------------HSLEEANESSD 871

Query: 626 K---VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           K   V + V  A G  C+RC    T VG       LC+ C ++++
Sbjct: 872 KYDGVSVLVQAAAGKVCDRCRMTKTDVGEDKNFENLCASCAKIVS 916


>gi|380032930|ref|YP_004889921.1| isoleucine-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|81631129|sp|Q88V89.1|SYI_LACPL RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|342242173|emb|CCC79407.1| isoleucine-tRNA synthetase [Lactobacillus plantarum WCFS1]
          Length = 932

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGENRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKANRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H    ++++ ++S +++        + + P   E      D + I V  A+G 
Sbjct: 843 ----FLDHLNTNVRQMLMVSALDL------HALSDAPEDAETF---GDTLAIKVGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|308180989|ref|YP_003925117.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046480|gb|ADN99023.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 932

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVVVQ-----------PAGENRK------------FVLAAELLDENAERFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 178/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKANRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H    ++++ ++S +++        + + P   E      D + I    A+G 
Sbjct: 843 ----FLDHLNTNVRQMLMVSALDL------HALSDAPEDAETF---GDTLAIKAGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|347726977|gb|AEP19847.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 908

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 193/329 (58%), Gaps = 37/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGLMADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F++V          + F+      +WTTTPWT+PAN  +AV+ +L 
Sbjct: 199 EYYDKK-SPAIYVAFQVVDG-KGVLATTDHFV------IWTTTPWTIPANLGIAVSDELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  +E                        D K    IVA  LV  +    G T   +  +
Sbjct: 251 YTRIE-----------------------HDGKGY--IVAETLVEDVTTALGWTDYTVSGS 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G + E+    HP+ +R   V+I GD++T ++ TGLVHTAPGHG++DY     YGL +L
Sbjct: 286 WNGREFEHMTAQHPLYDRTSLVMI-GDHVTADA-TGLVHTAPGHGEDDYRVGQAYGLDVL 343

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD G  TEEA  F GL    D N  +   L+E   L+  +  +H YP+DWRTKKP I
Sbjct: 344 CPVDDRGYMTEEAPGFEGL-FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPVI 402

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++ FR   +  I +V WVP
Sbjct: 403 FRATPQWFASIKDFRADMLREIEEVNWVP 431



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 185/334 (55%), Gaps = 39/334 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQADVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF----ES 513
               RR+ QTV+   ++++ +++APILPH A++VWQ +P          A+ VF    E+
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP-------AKTADSVFLTDLEA 782

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
             P+ +++        +  W K L  R +V K +E+AR  KLIG  LEAK+        L
Sbjct: 783 VAPLTEDE-----TALLAKWSKFLTFRDDVLKAIEIARGEKLIGKPLEAKL--------L 829

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            +   E        D ++++  +SQ++ + S       ++ Y+            I V++
Sbjct: 830 VAPKGETKQLLETIDNVRQLLQVSQLDYVDSA------DVDYA---------TAEISVAK 874

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           A+G+ C RCW YST++G    HP LC RC EV+A
Sbjct: 875 ADGAACARCWTYSTELGHDEAHPELCPRCTEVIA 908


>gi|348027410|ref|YP_004767215.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
 gi|341823464|emb|CCC74388.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
          Length = 931

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/335 (43%), Positives = 195/335 (58%), Gaps = 37/335 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F R GV  DW++PYLTL    E AQI VFG+M+ +GYIY+G K V+W P   TALAEAE
Sbjct: 139 DFIRLGVLGDWDHPYLTLRKPVEVAQIGVFGEMAKKGYIYKGLKTVYWCPHCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-VWTTTPWTVPANAAVAVNAK 121
           +EY +   S SIY  F+ V        +     PD   A +WTTTPWT+P N A++ N  
Sbjct: 199 IEYKDDK-SFSIYVKFKSVDL---NCHMPKGADPDKVFALIWTTTPWTIPCNVAISANEN 254

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV-PTLEA-KWGTKLVI 179
            +Y  V I     GD                     ++++A DLV PT++A K     V+
Sbjct: 255 FEYVWVRI-----GDE--------------------YLLMAKDLVEPTMKAGKVEDYEVL 289

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY-- 237
              + G  LE   + HP  +R+ P+++G D++T E+GTGLVHTAP HGQ+D+    KY  
Sbjct: 290 PDVMTGKQLEGLVFKHPFYDRKVPIILG-DHVTLEAGTGLVHTAPDHGQDDFDVCKKYAA 348

Query: 238 -GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
            GL  L  VD  G++T++   F G  V  D NV V+K L E  +L  +  + H+YP+ WR
Sbjct: 349 WGLKPLGTVDGTGRYTDKVPGFEGQFVF-DTNVPVIKKLAELGALFAKSTFRHQYPHCWR 407

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            K+P I+RATEQWFASV+GFRQ A+DAI  VKW+P
Sbjct: 408 CKEPIIYRATEQWFASVDGFRQKALDAIDTVKWIP 442



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/360 (37%), Positives = 202/360 (56%), Gaps = 30/360 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G    V PQE    YGADVLRLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVLRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           RK+R T RYLLGNL D+    + I+Y D+  +D++AL +LE + + + ++YE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGNLADFDPAKDMIAYQDMTDLDKWALLRLEQVFEEVTDAYENYQFHVMY 714

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
             I  F  VDLS  Y DV KDRLYT    S  RRS Q+ +   L ++V+++AP+L   AE
Sbjct: 715 HAIHNFCTVDLSAMYLDVIKDRLYTEKADSQIRRSAQSAMYVILDTLVKIVAPVLSFTAE 774

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           +VWQN+P     E     E V  + WP   +++    +     W + L  R ++ +VLE 
Sbjct: 775 EVWQNMPAVEGKE-----ESVLLTDWPKAHKEYLDADLDA--RWAQFLSYRRDLTRVLEG 827

Query: 550 ARTGKLIGSSLEAKVYLFTD--DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPN 607
           AR    IG +L+A V ++ D  D    S+ +         D L  + I+S+ +++     
Sbjct: 828 ARKEHKIGHALDAAVTIYADGEDYDFLSQWQ---------DQLATLLIVSEAKLV----K 874

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           G       +GE   + K    + V  +   KCERCW +S  VGS   HPTLC+RC  VL+
Sbjct: 875 GEAPADAVAGEDHADMK----VVVVPSTAEKCERCWIHSDTVGSDPNHPTLCARCAAVLS 930


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|424738824|ref|ZP_18167253.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|422947308|gb|EKU41705.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
          Length = 922

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 193/329 (58%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R G+  DW NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FRRLGIRGDWENPYITLKPEFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +  A             D    +WTTTPWT+PAN  +++N +  
Sbjct: 200 EYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFIIWTTTPWTLPANLGISLNPEFI 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV           A ANKK               I+A +L+ ++    G     + + 
Sbjct: 252 YVVV-----------AVANKK--------------FIIAKELLESVATTLGWVDYEVVQE 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  L+     HP  +R+  +++ G+++T E+GTG VHTAPGHG++DY    +YGL IL
Sbjct: 287 VKGEALDRIVAQHPFYDRESLIMV-GEHVTAEAGTGCVHTAPGHGEDDYHIGKQYGLGIL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP+D+ G +T+EA  F G+    D N  V + L E  +L   + + H YP+DWRTKKP I
Sbjct: 346 SPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVGALEKLDFFTHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFASVE FR   ++A+    + P
Sbjct: 405 YRATPQWFASVEAFRGELLEAVKATAFTP 433



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 189/343 (55%), Gaps = 34/343 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 603 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNIADFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +SY +L  +DQY   +L++++K +R +Y+ Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 663 KKDRVSYAELREMDQYVYMRLQDVLKTVRAAYDRYDFAAVYHVVNNFVAVELSSFYLDIA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA- 507
           KD +Y  G  +  RR+ QTV+   L+++V+++ PI+PH  +++W  L     +E+ S   
Sbjct: 723 KDVVYIEGHDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYLHAQGIVEEVSVQL 782

Query: 508 ----EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
               E   ++ +  L  KW            KI+++R ++ K LE AR  K IG SLEAK
Sbjct: 783 TDFPEVDVQANFDSLRTKWE-----------KIIDVRDDILKALEEARNAKTIGKSLEAK 831

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           V ++  +  +A     +  A  D   L  +       +  +    L              
Sbjct: 832 VTVYAKEDVVAL----LNDANIDFAQLSIVSAFEVAAIEEAPAEALTL------------ 875

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V I V +A G KCERCW+ S  VGS    PT+C+RC EV+
Sbjct: 876 -EHVSIVVEKATGEKCERCWSISETVGSNQAQPTVCARCAEVV 917


>gi|410986531|ref|XP_003999563.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
           mitochondrial [Felis catus]
          Length = 1012

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 190/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEA
Sbjct: 196 SAFIRWGIMADWNNCYYTFDGKYEAKQLRLFYQMYEKGLIYRSYKPVFWSPSSRTALAEA 255

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P    L++   P +   VWTT PWT+PAN AV     
Sbjct: 256 ELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSP-VSFLVWTTQPWTIPANQAVCYMPD 314

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         I+A+D V ++ +   T L +  
Sbjct: 315 SKYAVV---------------KCSKSGDLY--------ILAADKVTSIASVLETTLEVIS 351

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 352 TFSGVDLENGTCTHPLIPGKASPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLST 411

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FTE AG +     VL +G   V+K L     L+ EE   H YPYDWRTKKP
Sbjct: 412 DCLVDEDGVFTEVAGPELENKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKP 471

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 472 VVIRASKQWFVNITDIKATAKELLKKVKFIP 502



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 167/345 (48%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGN+  +    ++I 
Sbjct: 688  PPYGADVLRWWVAESNVFTEVTIGPAALNAARDDINKLRNTLRFLLGNVSGFNPETDAIP 747

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 748  VNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 807

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+ +Q++P+          + VF + 
Sbjct: 808  ESAGDPGRRSCQTALAEILDVMVRSFAPILPHLAEEAFQHIPYV------KEPKSVFRTG 861

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +          +  L 
Sbjct: 862  WIRTSSIWKK----------PGLEEAIEGACAMRDSFLGSIPGKNAAEYQVTIVIEPGLL 911

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +LP  P  L  + I   G +L+  EG D    
Sbjct: 912  FEIIEMLQAEETSSTSQLNELMMASQTTLLPEEPRTLTTDVIERKGTFLINLEGGDIREE 971

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+           LC RC +V+A
Sbjct: 972  SSYKVIVMPTTKE--KCPRCWKYTADSSD-----ALCPRCTQVVA 1009


>gi|358375898|dbj|GAA92473.1| isoleucyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
          Length = 1005

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 197/341 (57%), Gaps = 35/341 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 149 MKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIYRRFKPVYWSPSTGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E HVS +    + + S P   +   LL +   ++   +WTTTPWT+PANAA++V
Sbjct: 209 AELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISAVIWTTTPWTLPANAAISV 266

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI---IVASDLVPTLEAKWGT 175
           +  L Y +V+  +                G +L  Q ++     I+  DL   + A  G+
Sbjct: 267 HPSLDYTIVDSDTQ---------------GYLLIAQSRLEYLEGILKEDLSVIVPAIPGS 311

Query: 176 KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           KL        +D    R +    + +   +I  D++T +SG+GLVH APGHG EDY   L
Sbjct: 312 KL--------ADQTTYRSLFKGPDAEPQPIIAADFVTADSGSGLVHCAPGHGMEDYEACL 363

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
             G+P  +PVDD GKFT++A      + SG  VLGDGN AV++Y++ +  LI +  YEHK
Sbjct: 364 SRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLGDGNAAVLEYVESKGLLITKHRYEHK 423

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 424 YPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 464



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 169/348 (48%), Gaps = 17/348 (4%)

Query: 325 GQVKWVPPQEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           G+ K     +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LL
Sbjct: 662 GKGKKQAENQAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLL 721

Query: 382 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
           G L D+R  + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S
Sbjct: 722 GALSDFRPEDRLPYDQLQQVDRIALKHLSDTVVACQKACENFEFYKAVNAINRWANLEFS 781

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 501
            FY +  KDRLYT    S +RR+ QT L      +  V+API P L E+ W++ P A   
Sbjct: 782 AFYMEAIKDRLYTYAENSSSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEAIK- 840

Query: 502 EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
              +  E   +        +W+   +   Y    I+ + + V  + E AR  K +GSSL+
Sbjct: 841 ---THCEHPLKRIVSAPASEWQNQALEADY--QDIVAVNSVVKAIQEKARGQKQMGSSLQ 895

Query: 562 AKVYL-FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP--YSGE 618
           + V++    DA+  S    + +   D   +  +   +  E +P      IRN    YS  
Sbjct: 896 SFVHIVLPKDATSESVFARLQSELPDVFVVSSVSFGAHEEPIPED----IRNAEWQYSEV 951

Query: 619 YLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           Y +       + V   + SKC RCW Y        E  T+C RC EV+
Sbjct: 952 YELPSGGTGTVYVYTPQASKCPRCWRYVVPETEAAEE-TVCGRCEEVV 998


>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 921

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 147/329 (44%), Positives = 201/329 (61%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPY+TLD EYEA QI+VFG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 140 FMRLGVRGDWWNPYVTLDKEYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +       +G       D  + +WTTTPWT+PAN  ++V+ +L 
Sbjct: 200 EYHDKR-SPSIYVAFNIKDGKNVLAG-------DEKIIIWTTTPWTIPANLGISVHPELD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y VV++                       D+K V   VA+ L+  L+A++  + V ++KT
Sbjct: 252 YNVVKVN----------------------DEKYV---VAAGLLEKLQAEFEWEQVEVEKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LE+    HP+  R   +V+ GD++T ++GTG VHTAPGHG+EDY+   KYGL +L
Sbjct: 287 VKGQELEHVVATHPLYGRDS-LVMCGDHVTLDAGTGCVHTAPGHGEEDYLVGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            PVDD+G  TEEA  F G+      N  + + LDE  +L+      H Y +DWRTKKP I
Sbjct: 346 CPVDDKGNMTEEAPGFEGM-FYDQANKPITEKLDEVGALMKLTFITHSYAHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +RAT QWFAS+  FR   + AI  V+W+P
Sbjct: 405 YRATAQWFASIADFRDELLQAINDVEWIP 433



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 189/363 (52%), Gaps = 36/363 (9%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP       GAD+LRLWV+SVDY  DV +  ++L+Q+S+ YR
Sbjct: 587 ALDGQGRKMSKSVGNVV-VPNDVMKQLGADILRLWVASVDYQSDVRVSDKILKQVSESYR 645

Query: 372 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNLHD+    N +  +DL  +  + L +L  +++ ++++Y+ YQF  ++ 
Sbjct: 646 KIRNTFRFLLGNLHDFDPAVNRVKNEDLDGVHLFMLVKLNEVIEKVKDAYDQYQFSTVYH 705

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F  ++LS+FY D+AKD LY        RR  QTV+   +L++ ++++PIL H A++
Sbjct: 706 TIHNFCTIELSSFYMDLAKDTLYIEHADHAERRKIQTVMYESVLTLTKLVSPILSHTADE 765

Query: 491 VWQNLP----FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW+ +P     +  L D   AE   + +   L  KW+ F           + +R +V K 
Sbjct: 766 VWEEIPAVSEASVQLTDMPEAESFGDVE--QLKAKWQHF-----------MAVRDDVLKA 812

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTP 606
           LE AR  K IG SL A V L+ D   L     E+         L+++FI+S V +     
Sbjct: 813 LEQARNDKKIGKSLTAAVTLYADGNVL-----ELLNT---TPNLEKLFIVSAVRIKAGVE 864

Query: 607 NGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                 + +         D + I V +AEG  CERCW  +  VG+   HP LC  C E +
Sbjct: 865 AAPEDAMSF---------DTLRIVVEKAEGETCERCWVVTPTVGTNDSHPGLCKSCAETV 915

Query: 667 AVQ 669
              
Sbjct: 916 ETH 918


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R G+  +W NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 140 FRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +  A             D    +WTTTPWT+PAN  +++N +  
Sbjct: 200 EYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFVIWTTTPWTLPANLGISLNPEFM 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y VV           A ANKK               I+A DL+ T+    +W    VI++
Sbjct: 252 YVVV-----------AVANKK--------------FIIAKDLLETVATALEWEAYEVIQE 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G  L+     HP  +R   V++ G+++T ++GTG VHTAPGHG++DY  S +YGL I
Sbjct: 287 -VKGEVLDRIVAQHPFYDRDSLVMV-GEHVTADAGTGCVHTAPGHGEDDYHISKQYGLDI 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D+ G +T+EA  F G+    D N  V + L E  +L       H YP+DWRTKKP 
Sbjct: 345 LSPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPV 403

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFASVE FR   ++A+    + P
Sbjct: 404 IYRATPQWFASVEAFRGELLEAVKATAFTP 433



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 199/344 (57%), Gaps = 36/344 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 603 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNIADFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y +L  +DQY   +L++++K +R +Y+ Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 663 TKDRVAYAELREMDQYVYMRLQDVLKTVRTAYDRYDFAAVYHVVNNFVAVELSSFYLDIA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y  G+ +  RR+ QTV+   L+++V+++ PI+PH  +++W  L    T+E+ S   
Sbjct: 723 KDVVYIEGSDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYLHAQGTVEEASVQL 782

Query: 509 FVF-----ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
             F     ++ +  L  KW            KI+++R ++ K LE AR  K IG SLEAK
Sbjct: 783 TDFPEEDVQANFENLRAKWE-----------KIIDVRDDILKALEEARNAKTIGKSLEAK 831

Query: 564 VYLFTDDASLASRLREMCTAKHDADT-LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           V ++  +        ++    +DA+    ++ I+S  EV        I  +P     L  
Sbjct: 832 VTVYAKE--------DVVALLNDANIDFAQLSIVSAFEV------ATIEEVPADALVL-- 875

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V I V +A G KCERCW+ S  VG+   HPT+C+RC EV+
Sbjct: 876 --EHVSIVVEKATGEKCERCWSISETVGANAAHPTVCARCAEVV 917


>gi|313673045|ref|YP_004051156.1| isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939801|gb|ADR18993.1| Isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 931

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 213/387 (55%), Gaps = 41/387 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+T+D +YEA  ++   +    G IY+G KPV+W     TALAEAE+
Sbjct: 140 FKRLGVVGDWDNPYITMDYQYEAITLKELYKFFNNGGIYKGSKPVYWCIDCVTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F +        G+      DL + +WTTTPWT+PAN  VA + + +
Sbjct: 200 EY-DDHTSYSIYVKFPVYEETKLKLGVQG----DLNVVIWTTTPWTLPANLGVAFHPEFK 254

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK-KT 182
           Y+++ I            NK  + G +L        I+AS+LV  L  ++G     + K 
Sbjct: 255 YSIIRILD--------TNNKNLKKGEML--------IIASELVEKLMGQFGVDSYEEVKQ 298

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G + EN +  HP  +R+  ++I G+++T + GTG+VHTAPGHGQEDY   LKYGL I 
Sbjct: 299 ILGVEFENGKCKHPFYDRE-SLMILGEHVTLDQGTGIVHTAPGHGQEDYEVGLKYGLDIY 357

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G F ++   F+GL+V    N  +V+++D   +LI+    +H YP+ WR KKP I
Sbjct: 358 NPVDDHGNFKKDVELFAGLNV-NKANKIIVEHIDNNGTLILSGNIQHSYPHCWRCKKPVI 416

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW---- 346
           +RAT QWF S+E    R  A+  I +V+W P           +  P +     R W    
Sbjct: 417 YRATPQWFISMEANDLRTKALSEIKKVRWTPSWGENRITAMIENRPDWCISRQRSWGVPI 476

Query: 347 -VSSVDYTGDVMIGPQVLRQMSDIYRK 372
            V S    G+++I  ++  ++ D + K
Sbjct: 477 AVFSCTECGEIIINEEIQNKVLDAFMK 503



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 203/362 (56%), Gaps = 41/362 (11%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  V PQE    YGA++LRLWV++ DYT DV I   +++++ + YR
Sbjct: 603 VDGKGRKMSKSLGNV--VKPQEIIEKYGAEILRLWVAAEDYTEDVRISEDIIKRLVESYR 660

Query: 372 KLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T RYLLGNL+D+      + +D L  +D+Y L++ + +   I ++ ++YQF   + 
Sbjct: 661 KIRNTARYLLGNLYDFSHNKDYVEFDKLMELDKYILYKWQLVKDRIYKANQNYQFHIFYH 720

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F I DLS FY D+ KDR+Y+    S+ RRS QT +   +  +  V++PIL   A++
Sbjct: 721 TLINFCINDLSAFYLDIIKDRVYSYRADSYQRRSAQTAMFQLIKEMAIVMSPILSFTADE 780

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWP----VLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           +W+ +P     +     EFVF   +P    V D   R           +I++++ EVNK 
Sbjct: 781 IWEYMP-----DFSGKKEFVFLETFPSVMKVDDNLLRKI--------DRIIDIKKEVNKA 827

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ--VEVLPS 604
           +E+AR  K++G  L+A+V L+ D++ LA      C      + L+++FI+S+  V+ + +
Sbjct: 828 IEIARNEKIVGHPLDARVELYIDESDLA-----YCKID---EGLEKVFIVSELYVDNIDN 879

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
           +P+ +     Y+ +   +G  KV +  S+    KCERCW +S  +G   EHP LC RC E
Sbjct: 880 SPSDV-----YTSD---DGNVKVKVSASKL--PKCERCWVHSETIGESKEHPALCRRCVE 929

Query: 665 VL 666
            L
Sbjct: 930 NL 931


>gi|301095723|ref|XP_002896961.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108608|gb|EEY66660.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1052

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 197/332 (59%), Gaps = 45/332 (13%)

Query: 4   FKRYGVWADW----NNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 59
           F+R+GV ADW    ++ YLT+ P YEA Q +V  +M   G I+RG KPV+WSPSSRTALA
Sbjct: 149 FERWGVLADWSGAEDSVYLTMSPSYEARQYDVLKKMVHDGLIFRGFKPVYWSPSSRTALA 208

Query: 60  EAELEYPEGHVSRSIYAVFRMVSAPPSTS----GLLNEFLPDLGLAVWTTTPWTVPANAA 115
           EAELEY + HVS + Y  F   S   +TS     +L ++   L   VWTTTPWT+P+N A
Sbjct: 209 EAELEYQDDHVSHAAYVKFHFASMGSNTSEQAASVLAKYGDRLSAVVWTTTPWTIPSNQA 268

Query: 116 VAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL------ 169
           + VNA L+Y +V                  RP N          ++AS L  +       
Sbjct: 269 LCVNADLEYVIV------------------RPRNAYS-----CYLIASALQESFATVLKG 305

Query: 170 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 229
           +A+   +L + +TL GSDLE   + HP+ +R+  VV+ G+++TT++GTG+VHTAPGHGQ+
Sbjct: 306 DAEEEVELEVLETLNGSDLEGAHFTHPLVDREA-VVLAGEHVTTDAGTGVVHTAPGHGQD 364

Query: 230 DYVTSLKYGLP------ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 282
           DY   + +         I+ PVD +G FT +AG+   GL VL +GN+AV+  L    +L+
Sbjct: 365 DYFAWMAHHSKPGEHPDIICPVDADGCFTSDAGRGLEGLCVLDEGNMAVIDQLKYSGNLL 424

Query: 283 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE 314
               Y H+YPYDWRTKKP I RAT QWFA ++
Sbjct: 425 SIGEYHHRYPYDWRTKKPVILRATAQWFARLD 456



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 185/350 (52%), Gaps = 17/350 (4%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
            P YGADVLR WV++ DYTGDV IGP V+ + SD  RK+R T R+LLGNL D+    +++ 
Sbjct: 703  PAYGADVLRFWVATTDYTGDVSIGPGVVGKASDALRKVRNTARFLLGNLQDFDPAHDAVP 762

Query: 395  YDDLPM-IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
            Y  +P  +D+Y L ++  +  ++  +Y+++ F +    +  FI  DLS FY +  KDRLY
Sbjct: 763  YSKMPFSLDRYMLHEVNALAASVTAAYDAFAFNRAQHALSHFISTDLSAFYMEATKDRLY 822

Query: 454  TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV---WQ-NLPFAYTLEDGSAAEF 509
                 S TRRS QTVL   L ++ R +AP++PH AED+   W+  L     LED   + F
Sbjct: 823  CDAADSPTRRSAQTVLWLSLQALTRALAPVVPHTAEDIRLHWEAQLQGDIPLEDVPGSVF 882

Query: 510  VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
            + E  W    E+W+   +     W  + +LR EVN+V+E  R    +GS LE  VY+   
Sbjct: 883  L-EQGWMPSAEEWKDDDLARD--WTAVRQLRFEVNRVVEQMRQAGRVGSQLECNVYVVAS 939

Query: 570  DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            ++    R+ E+ +       L+ + + S V+V+ S           +   L  G +   I
Sbjct: 940  ESD--PRVAELLSPLTHTSELEDVLLCSSVDVVASETEIESAEQFKATCQLAMGSNDAPI 997

Query: 630  GV----SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
             V    + A+G KC RCW Y+ +V +      LC RC +   ++ +  +A
Sbjct: 998  DVKLVLTPAKGHKCPRCWKYAPEVDA--AETQLCLRCAQATDLRSVTDLA 1045


>gi|350589265|ref|XP_003482824.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 1055

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 194/331 (58%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADW+N Y T D +YEA Q+ +F QM  +G IYR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWDNCYYTFDGKYEARQLRIFYQMYDKGLIYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRS+Y  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSVYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANQAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G+        F I+A+D V ++ +  GT   +  
Sbjct: 316 SKYAVV---------------KCSKSGD--------FYILAADKVTSVASTLGTTFEVIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE+    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 353 TFSGVDLESGTCTHPLIAERASPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHSLST 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVNEDGVFTDAAGPELQNKAVLEEGTEVVIKMLQAANNLLKEEELVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A D + +VK++P
Sbjct: 473 VVIRASKQWFVNITDVKTTAKDLLKKVKFIP 503


>gi|115402377|ref|XP_001217265.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
 gi|114189111|gb|EAU30811.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
          Length = 1519

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/342 (41%), Positives = 197/342 (57%), Gaps = 37/342 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW + + T+D ++E  Q+ VF +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 668 MKGFRGFAVMADWESHWKTMDKDFEKRQLGVFREMVEKGLIYRRFKPVYWSPSTGTALAE 727

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAV 118
           AELEY + HVS +    F +VS P  T    N  L    L   +WTTTPWT+PANA +AV
Sbjct: 728 AELEYKDDHVSTAALVKFPLVSIP--THLAQNPLLQGKKLSAVIWTTTPWTLPANAVIAV 785

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL- 177
           +A LQY VV+                         ++   +++A   +  LE+     L 
Sbjct: 786 HADLQYTVVQ------------------------SEEHGHLLIAQSRLEYLESMLKEDLS 821

Query: 178 VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           VI  ++ GS+L +     P+      +   +I  D++T +SG+GLVH APGHG +DY   
Sbjct: 822 VIVPSILGSELADQTTYRPIFKGSKAEDQPIIAADFVTADSGSGLVHCAPGHGMDDYDAC 881

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           +  G+P L+PVDD G+FT+ A      + SG  VLG+GN A ++Y++ Q  L+ +  YEH
Sbjct: 882 VSRGIPALAPVDDHGRFTDLAMPDDPARLSGKSVLGEGNDAALEYVESQGYLLAKHQYEH 941

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KYPYDWR+K P I RATEQWFA V   R AA+ A+  V +VP
Sbjct: 942 KYPYDWRSKLPIIIRATEQWFADVADIRGAAVKALEDVNFVP 983



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 168/336 (50%), Gaps = 25/336 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+RV + + Y+ L
Sbjct: 1194 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRVESQVPYEQL 1253

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
               D+ AL  L  +V+  +++  +++F+K    I R+  ++ S FY +  KDRLYT    
Sbjct: 1254 QQSDRIALMHLAEMVRTCQKACANFEFYKAVNAINRWANLEFSAFYMETIKDRLYTYSEN 1313

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLE-----DGSAAEFVFES 513
            S +RR+ QT L      +  V+API P L E+ W++ P A             +E V E 
Sbjct: 1314 STSRRAAQTTLFHIYHYLQEVLAPITPMLVEETWEHTPEAIKTHCEHPLQRIVSEPVSEW 1373

Query: 514  KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
            + P L+  ++            ++ + + +  + E AR  K +GSSL++ V++   +   
Sbjct: 1374 QNPSLETDYQ-----------DLIAVHSAIKTLQEQARGQKQMGSSLQSFVHIVLPEGVA 1422

Query: 574  ASRLREMCTAKHDADTLQRIFIISQVEVLP-STPNGLIRNIP--YSGEYLVEGKDKVWIG 630
            A+ +     A+     L  +F++S V +      +  + ++   YS EY +    K  + 
Sbjct: 1423 AASVFHRNLAE-----LPDLFVVSSVTLAAHGEESSALADVEWQYSQEYELPNGQKGTVY 1477

Query: 631  VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V   + +KC RCW Y        E P LC RC +V+
Sbjct: 1478 VYAPQDTKCPRCWRYVVPESQGAEEP-LCGRCEDVV 1512


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5.1|SYI_ANATD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 204/336 (60%), Gaps = 42/336 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLAVWTTTPWTVPANAAVAV 118
           +EY E   + SIY  F ++       GL +  LP     + + +WTTT WT+P N A+A+
Sbjct: 199 IEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIVIWTTTTWTLPGNLAIAL 252

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           NA   Y++++I                  GN +       ++VAS+LV  +      K+ 
Sbjct: 253 NADFDYSLIDI------------------GNEI-------LVVASELVERVMK--TNKIE 285

Query: 179 IKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
             K +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    
Sbjct: 286 QYKEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCQ 344

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +Y + ++ PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ W
Sbjct: 345 RYNIHVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEASGHLLGVEKITHQYPHCW 403

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R K P IFRATEQWFASV+GFR  A+ A+  VKWVP
Sbjct: 404 RCKNPVIFRATEQWFASVKGFRDQALKAVDDVKWVP 439



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 199/331 (60%), Gaps = 34/331 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++  +IAPIL   AE++WQN+ F         AE VF ++WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTILIAPILSFTAEEIWQNIIFK-----EEDAESVFLTRWP 793

Query: 517 VLDEK-WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            ++E   R   + E   W KI+E++  V+K LE+AR  KLIGSSL++KV +F     +  
Sbjct: 794 SINEDILRDEALREK--WDKIIEIKDIVSKQLEIARNEKLIGSSLDSKVKIFA-KCDIKR 850

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            + E      + D +Q + I+SQ++V  S                    D++ + V +A+
Sbjct: 851 FIEE------NKDIIQEVLIVSQLDVEESDS------------------DQIKVEVYKAD 886

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           GSKCERCW + T VG   E   +C RCYEV+
Sbjct: 887 GSKCERCWKFDTMVGKNEESLNVCPRCYEVV 917


>gi|226289429|gb|EEH44937.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1002

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 195/340 (57%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+++ V ADWNN + T+D  +E  Q++VF +M  +G I R  KPV+WSPSSRTALAE
Sbjct: 134 MKGFRQWAVMADWNNSWKTMDKNFEKQQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAE 193

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H S +    F + S P     +L    P++   +WTTTPWT+PANAA+AV+ 
Sbjct: 194 AELEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAAIAVSP 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLV 178
            L+Y+VV                        K +   ++++ S  +  L+   + G   V
Sbjct: 254 TLEYSVV------------------------KSENHGYLLIGSLRLEYLQTLLQEGEIAV 289

Query: 179 IKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           +   L G +L +     P+  D      +I  D++T ++G+GLVH APGHG EDY   L 
Sbjct: 290 VGSPLLGYELGSHATYRPLFKDESVSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLA 349

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
           +G+   +PV+DEG FT+EA        SG  VLG+G   V+KY++ +  L+ +  YEHKY
Sbjct: 350 HGITAHAPVNDEGLFTDEAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKY 409

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTK P I RATEQWFA V   R  A+ A+  V+++P
Sbjct: 410 PYDWRTKLPVIVRATEQWFADVGDIRHDALRALKDVQFIP 449



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 175/346 (50%), Gaps = 29/346 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S DYT D++IG  VL+ ++    K R T R LLG+L D+   ++I Y+ L
Sbjct: 664 GPDSLRLWVASSDYTKDIIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFDPKSAIPYESL 723

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
            +ID+ AL QL N+V   +++Y +++F+K    I ++  ++ S FY +  KDRLY     
Sbjct: 724 HIIDKIALLQLRNLVNKCQDAYLNFEFYKAVTAINKWANLEFSAFYIESLKDRLYADSVN 783

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF---ESKW 515
           S +RR+ QT L         ++ P++P L E+ W++ P A   E G   + V     ++W
Sbjct: 784 SLSRRAAQTTLCHIYYHFQGILGPVVPLLVEESWEHTPEAIKAEFGHPLQRVMTEPAAEW 843

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
              DE  R+F +        ++ + T +N + E AR  K +GSSL++ VY+     SL  
Sbjct: 844 QD-DELERSFLL--------LMAVNTAINTMQENARNKKEMGSSLQSFVYI-----SLPC 889

Query: 576 RLREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEG---KDKVW 628
              E          LQ +F++S V V     P  P        Y  ++   G      VW
Sbjct: 890 GAAEAPVFAQFGAELQDLFVVSSVTVGYNNAPVPPEIEASAWKYRSDFQFPGDVQSGSVW 949

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSM 674
           I   +A  +KC RCW Y+  +    ++P LC RC  V+AV  +  M
Sbjct: 950 IYTPQA--NKCGRCWRYAVPLECKKDNP-LCHRC--VVAVGELLKM 990


>gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|254782388|sp|B1I4A3.1|SYI_DESAP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 930

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 147/361 (40%), Positives = 204/361 (56%), Gaps = 43/361 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV  +W+NPYLTL P +E  QIEVFG+M+ +GYIY+G K V+W     TALAEA
Sbjct: 138 AEFKRLGVRGEWHNPYLTLQPHFETRQIEVFGEMAKRGYIYKGLKSVYWCADCETALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY E   S SI+  F +V+      GLL +   D  + +WTTTPWT+P+N A+ V+  
Sbjct: 198 EVEYAEKE-SPSIHVAFPVVNG----RGLLPD--QDAAIVIWTTTPWTIPSNVAICVHP- 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
            +YA V ++S   G  A                     +VA DL        G     ++
Sbjct: 250 -EYAYVLLRS---GGRA--------------------YLVARDLAGNFRELLGDPGAGVE 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +   G +LE     HP   R   VV+  DY+T E GTG VH APGHG+ED+    +Y LP
Sbjct: 286 REYRGEELEGVVCRHPFVERDS-VVVLADYVTLEQGTGCVHIAPGHGEEDFALGQRYNLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++SP++ +G FT EAG   G+  L D N  VV+ L+ + +L+      H+YP+ WR K P
Sbjct: 345 VISPINGKGYFTAEAGNLDGIFYL-DANPVVVRELEARGALVGYSRMRHQYPHCWRCKHP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGP 360
             +RATEQWFAS++GFR+  ++AI +V+W+     PG+G D +R  V+     GD  I  
Sbjct: 404 VFYRATEQWFASIDGFRRHLLEAIDRVQWI-----PGWGRDRIRGMVAG---RGDWCISR 455

Query: 361 Q 361
           Q
Sbjct: 456 Q 456



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/331 (37%), Positives = 179/331 (54%), Gaps = 25/331 (7%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD+LRLWV S DY GD+ + P +L+QMS+ YRK+R T R+LLGNL D+    ++++Y +
Sbjct: 619 GADILRLWVCSADYRGDLAVSPGILKQMSEAYRKIRNTFRFLLGNLQDFDPDRDTVAYTE 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D+YAL +L  +   +  +Y  Y+F +++  +  + + DLS FY +V KDRLY    
Sbjct: 679 LTELDRYALLKLHRVTDRVLRAYREYEFHQVYHTLYNYCVTDLSAFYLNVIKDRLYCEPA 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR  QTVL A L S+VR++ P+L +  E+VW + P             + E     
Sbjct: 739 RSVNRRGAQTVLYAVLDSLVRLLVPVLAYTTEEVWGHFPANGKKPPSVQLLEMPEPNPEY 798

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           LD++           W ++L +R +V + LE AR  KLI  +LEA+  L+  +  L   L
Sbjct: 799 LDDELER-------RWERLLAVRQDVLRALEAARQEKLIRDALEAEAVLYA-EPELLEFL 850

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-DKVWIGVSRAEG 636
           RE      +   L  IF+ S V VLP+   G        GE  V G    + + V RA G
Sbjct: 851 RE------NTVQLPVIFVTSSVRVLPAAEAG--------GEEAVSGTVAGLKVAVRRAPG 896

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +KC RCW Y  + G   EHP +C RC  VL+
Sbjct: 897 TKCVRCWTYG-ETGVDPEHPEICPRCATVLS 926


>gi|254556997|ref|YP_003063414.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254045924|gb|ACT62717.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 932

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 195/330 (59%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG+KPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRGQKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITIDASFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y +V+           PA +  +             ++A++L+     ++G + V + KT
Sbjct: 251 YVLVQ-----------PAGENRK------------FVLAAELLDENAKRFGWEDVQVLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LEN    HP DN +  V + GD++T +SGTGLVHTAPG+G++DY    +Y LPI 
Sbjct: 288 VKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTAPGYGEDDYRIGKQYDLPIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T EAG  F+G+    D N   +  L     L+   PYEH YP+DWRTKKP 
Sbjct: 348 APVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLLKYMPYEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV   R   + ++  V++ P
Sbjct: 407 IFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 179/329 (54%), Gaps = 27/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV    L+++ ++  P+LPH  E++W   PF    E     EF   ++ P 
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW---PFLKEPE-----EFAQLAEMPA 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +     +  +  +  W + ++LR+ V K LE AR  KLIG SLEA + L+ DD + A   
Sbjct: 788 VQNYANSDEL--MAQWTRFMDLRSNVLKALEEARDAKLIGKSLEAHLDLYVDDDTQA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                  H    ++++ ++S +++        + + P   E      D + I V  A+G 
Sbjct: 843 ----FLDHLNTNVRQMLMVSALDL------HALSDAPADAETF---GDTLAIKVGHADGD 889

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VGS   +P LC+RC  ++
Sbjct: 890 VCDRCRMVKTDVGSDEAYPMLCARCAAIV 918


>gi|295657888|ref|XP_002789508.1| isoleucyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283263|gb|EEH38829.1| isoleucyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1024

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 195/340 (57%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+++ V ADWNN + T+D  +E  Q++VF +M  +G I R  KPV+WSPSSRTALAE
Sbjct: 159 MKGFRQWAVMADWNNSWKTMDKNFEYKQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAE 218

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H S +    F + S P     +L     ++   VWTTTPWT+PANAA+AVN 
Sbjct: 219 AELEYREDHKSIAALVKFPLTSMPSKLRDMLPGDTSEVFAVVWTTTPWTLPANAAIAVNP 278

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLV 178
            L+Y+VV                        K +   ++++ S  +  L+   +     V
Sbjct: 279 TLEYSVV------------------------KSENHGYLLIGSLRLEYLQTLLQEVEIAV 314

Query: 179 IKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           +   L G +LE+     P+  D      +I  D++T ++G+GLVH APGHG EDY   L 
Sbjct: 315 VGSPLLGYELESETTYRPLFKDESVSKPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLA 374

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
           +G+   +PV+DEG FT+EA        SG  VLG+GN  V+KY++ +  L+ +  YEHKY
Sbjct: 375 HGITAYAPVNDEGLFTDEAIPSNPSLLSGKPVLGEGNKDVLKYVESKGQLLAKHIYEHKY 434

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTK P I RATEQWFA V   R  A+ A+  V+++P
Sbjct: 435 PYDWRTKLPVIVRATEQWFADVGDIRHDALRALKDVQFIP 474



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 176/347 (50%), Gaps = 29/347 (8%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++IG  VL+ ++    K R T R LLG+L D+   ++I Y+ L
Sbjct: 689  GPDSLRLWVASSDYTKDIIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFDPKSAIPYESL 748

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL N+V   +++Y +++F+K    I ++  ++ S FY +  KDRLY     
Sbjct: 749  HVIDKIALLQLRNLVNTCQDAYLNFEFYKAVTAINKWANLEFSAFYIESLKDRLYADSVN 808

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF---ESKW 515
            S +RR+ QT L         ++ P++P L E+ W++ P A   E     + V     ++W
Sbjct: 809  SLSRRAAQTTLCHIYYHFQVILGPVVPLLVEESWEHTPEAIKAEFAHPLQRVMTEPAAEW 868

Query: 516  PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
               DE  ++F +        ++ + T +N + E AR  K +GSSL++ VY+     SL  
Sbjct: 869  QD-DELEKSFML--------LMAVNTAINTMQENARNKKEMGSSLQSFVYI-----SLPC 914

Query: 576  RLREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEGKDK---VW 628
               E          LQ +F++S V V     P  P        Y  ++   G  K   VW
Sbjct: 915  GAAEAPVFAQFGAELQDLFVVSSVTVGYNNAPVPPEVEASAWKYRSDFQFPGDVKSGSVW 974

Query: 629  IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            I   +A  +KC RCW Y+  +    ++P LC RC  V+AV  +  M+
Sbjct: 975  IYTPQA--NKCGRCWRYAVPLECKKDNP-LCHRC--VVAVGELLEMS 1016


>gi|373114059|ref|ZP_09528276.1| hypothetical protein HMPREF9466_02309 [Fusobacterium necrophorum
           subsp. funduliforme 1_1_36S]
 gi|371652946|gb|EHO18352.1| hypothetical protein HMPREF9466_02309 [Fusobacterium necrophorum
           subsp. funduliforme 1_1_36S]
          Length = 430

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 209/339 (61%), Gaps = 25/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 113 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 172

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 173 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 232

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 233 DRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 287

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           V  + W V+ E+     V E   W KI ++R + NK+LE AR G  ++IG+SL+AK+  +
Sbjct: 288 VLLTDWYVMKEEHINEKVEEK--WAKIQKIRKDANKLLEKARQGENRIIGNSLDAKLQCY 345

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T++  L + L+E      + + L+   I+SQ+EVL             +GE   E KD +
Sbjct: 346 TENTDLKTFLQE------NQEVLETALIVSQIEVLTEKTEAF-----SAGE---EYKD-L 390

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++ V  A+G KC+RCW YST++GS   HP +C RC  V+
Sbjct: 391 FLQVLHADGEKCDRCWKYSTELGSVEGHPHICPRCSSVV 429


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2.1|SYI_CALS8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|145410493|gb|ABP67497.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 200/330 (60%), Gaps = 30/330 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV+ +W +PY+TLDP++EA QI VFG+M+ +GYIY+G KPV+W PS  TALAEAE
Sbjct: 139 QFKRLGVFGEWEDPYMTLDPKFEARQIRVFGEMAKKGYIYKGLKPVYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   + SIY  F ++      +  LN     + + +WTTT WT+P N A+A+N   
Sbjct: 199 IEYQEDK-TYSIYVKFEVIDDKGLFAN-LNLSGKKVYIVIWTTTTWTLPGNLAIALNTDF 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP-TLEAKWGTKLVIKK 181
            Y++V++                  GN +       +IVAS+LV   ++     +     
Sbjct: 257 DYSLVDV------------------GNEI-------LIVASELVERVMKTNKIDQYHEIA 291

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G DLE  +  HP  +R   +VI G+++T E+GTG VHTAPGHG+ED+    +Y +P+
Sbjct: 292 RFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHTAPGHGEEDFEVCERYNIPV 350

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           + PVD++G  T+EAGKF+GL    D N  + K L+    L+  E   H+YP+ WR K P 
Sbjct: 351 IVPVDNKGYLTQEAGKFAGL-FYEDSNKEIAKELEASDHLLGVEKITHQYPHCWRCKNPV 409

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 410 IFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/333 (37%), Positives = 199/333 (59%), Gaps = 32/333 (9%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + +  +
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGCE 678

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+ F    ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEIWQNIIFKE--ED---AESVFLTSWP 793

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++E        E   W KI+E++  V K LE+AR  KLIGSSL++KV +F    ++   
Sbjct: 794 KVNENILKDETLEEK-WNKIIEIKDIVAKQLEIARNEKLIGSSLDSKVKIFA-KGNIKRF 851

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           + E      + D +Q + I+SQ+EV                       D++ + V +A+G
Sbjct: 852 IEE------NKDIIQEVLIVSQLEVEEGDS------------------DQIKVEVYKADG 887

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
            KCERCW + T VG   E+  +C RCYEV+ V+
Sbjct: 888 LKCERCWKFDTMVGKNEENLNVCPRCYEVVKVK 920


>gi|347727138|gb|AEP19927.1| isoleucyl-tRNA synthetase [Bacillus aquimaris]
          Length = 923

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 201/330 (60%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK+ GV  DW+NPY+TL PEYEA QI+VFG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKQLGVRGDWDNPYITLKPEYEAQQIKVFGDMAKKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L E      + +WTTTPWT+PAN  +AV+  L 
Sbjct: 199 EYQDKR-SPSIYVGFDITDG----KGVLAE---GTQMIIWTTTPWTIPANLGIAVHKDLS 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y VV                          +K+   +VA DL+  +    +W    V KK
Sbjct: 251 YVVVS-------------------------EKEKQYVVAEDLLEEVAKNLEWEDYSVSKK 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G +LE+    HP+ +R+  +VI GD++TT+SGTG VHTAPGHG++D++   KYGL +
Sbjct: 286 -VKGEELEHLVAKHPLYDRKS-LVILGDHVTTDSGTGCVHTAPGHGEDDFLVGKKYGLDV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD+G  T EA  F GL      N  + + L E  +L+      H YP+DWRTKKP 
Sbjct: 344 LCPVDDKGVMTAEAPGFEGL-FYDKANKPITEKLQEVGALLKLTFITHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR+  ++A+ + KW+P
Sbjct: 403 IFRATAQWFASIDKFRKELLEAVNETKWIP 432



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/362 (38%), Positives = 203/362 (56%), Gaps = 39/362 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGDGRKMSKSLGNV-MVPEKVMKQLGADILRLWVASVDYQSDVRVSDPILKQVAEVYR 644

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL D+    NS+ YD L  +DQ+ L +L ++VKN++ SY+ Y+F  I+ 
Sbjct: 645 KIRNTYRFLLGNLADFDPKSNSVPYDQLREVDQFMLVKLNDLVKNVKSSYDKYEFASIYH 704

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  +DLS+FY D AKD LY     +  RR+ QTVL   L+++ ++++PIL H A++
Sbjct: 705 AVNNFCTLDLSSFYLDFAKDVLYIESENNEERRAMQTVLYECLVALTKLMSPILSHTADE 764

Query: 491 VWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKV 546
           VW  LP     +  L D   A+ +  +    L  KW  F           LELR +V K 
Sbjct: 765 VWSYLPGVEGDSVQLTDMPEAKDIQNAD--ELKRKWNAF-----------LELRDDVLKA 811

Query: 547 LEVARTGKLIGSSLEAKVYLFTDD--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPS 604
           LE AR  K+IG SL AKV LF +D   SL   + E          L+++FI+S +E+   
Sbjct: 812 LEEARNQKMIGKSLTAKVTLFVNDETKSLLDSINE---------DLKQLFIVSAIEI--- 859

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
              G     P     + E     +I V +AEG  CERCW  +T VG   +HPTLC+RC  
Sbjct: 860 --GGKADEAPEHALNVGES----YIVVEKAEGETCERCWVVTTTVGEDKDHPTLCTRCAS 913

Query: 665 VL 666
           V+
Sbjct: 914 VV 915


>gi|348520728|ref|XP_003447879.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Oreochromis niloticus]
          Length = 1014

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 195/332 (58%), Gaps = 28/332 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F+R+GV ADW+  Y T D  YEAAQ++VF +M  +G IY+  KPV WSPSS TALAEA
Sbjct: 199 AAFQRWGVMADWDQCYYTFDGTYEAAQLKVFQEMHSKGLIYQDYKPVFWSPSSGTALAEA 258

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSR+IYA F +V+ PP  +    + L  + + VWTT PWT+PAN AV     
Sbjct: 259 ELEYNPEHVSRAIYATFPLVTLPPKIAS--QKGLESVSVLVWTTQPWTIPANQAVCYMPN 316

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            QY+VV+                 R  N  K       +VA++   ++ A  GT L    
Sbjct: 317 AQYSVVK-----------------RVDNSEK------FLVATERTASIAALLGTDLQTVG 353

Query: 182 TLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           T  GS LE     HP + ++Q P ++  +++T   GTGLVHTAP HG EDY  + ++ LP
Sbjct: 354 TFTGSLLEGGICKHPTIPDKQVP-LLPANHVTMVKGTGLVHTAPAHGMEDYSVASQFKLP 412

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           +   VD++GKF E AG +   L V+ +GN  V+  L +  +L+ EE   H YPYDWRTK+
Sbjct: 413 VECMVDEDGKFNELAGAELQKLSVVTEGNDKVISMLKQCNALLKEEQCVHSYPYDWRTKQ 472

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P + R ++QWF + E  +  A +A+ +V+ +P
Sbjct: 473 PVVIRPSKQWFINTETLKDKAKEALQKVRVLP 504



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 153/346 (44%), Gaps = 38/346 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWRVGNSI 393
            P YGADVLR WV+  +   +V IGP VL    D   KLR TL++LLGNL   D R+  ++
Sbjct: 690  PAYGADVLRWWVAESNVFSEVQIGPSVLNSARDSISKLRNTLKFLLGNLQGFDPRL-QAV 748

Query: 394  SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
                +  IDQY L  L      + ++Y  +   ++ +++Q FI  +LS+FYF + KDRLY
Sbjct: 749  DPKQMHYIDQYMLHLLREYSIKVTDAYSEFDAGRVIRVLQAFITRELSSFYFSIIKDRLY 808

Query: 454  TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                 S  RRSCQTVL   L  + R IAPILPH+AE+V+ + P           E +F+S
Sbjct: 809  CDAEDSLGRRSCQTVLEEILDGVTRSIAPILPHMAEEVYLHAP------GHDEGETLFKS 862

Query: 514  KWPVLDEKWRTFPVGEIY---------FWGKI---LELRTEVNKVLEVARTGKLIGSSLE 561
             W      WR   + E           F   I      R ++   +E     +L+ S  E
Sbjct: 863  GWIKSSSVWRRPGLEEAVEGACAIRDCFLSSIPGKNAARYDLTVAIEPGLLFELMESLQE 922

Query: 562  AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
                  +  A L    R     K   D L    +++    L +   G+IR          
Sbjct: 923  EPTSTTSQLAELMMAARVNLATKMPRD-LDPEALLNHGTFLINLEGGVIRE--------- 972

Query: 622  EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              +    I V+    ++C RC  Y+           LC RC  V++
Sbjct: 973  --ESAYSIAVTPTSAARCPRCRRYTANSAD-----CLCPRCQSVIS 1011


>gi|426240262|ref|XP_004014031.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Ovis aries]
          Length = 951

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 189/331 (57%), Gaps = 27/331 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEAE
Sbjct: 137 AFIRWGIMADWNNCYYTFDGRYEARQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAE 196

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   HVSRS+Y  F ++   P  + LL+   P +   VWTT PWT+PAN AV    + 
Sbjct: 197 LEYNPEHVSRSVYVKFPLLKPSPKLASLLDGSSP-VSFLVWTTQPWTIPANQAVCYMPES 255

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV+  S   GD                       I+ +D V ++ +  GT   +  T
Sbjct: 256 KYAVVKCSS--SGD---------------------LYILGADKVTSVASTLGTTFEVIST 292

Query: 183 LAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +G DL N    HP +  R+ P ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 293 FSGVDLGNGTCAHPLISERESP-LLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLST 351

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G  AV+  L    +L+ EE   H YPYDWRTKKP
Sbjct: 352 DCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEELVHSYPYDWRTKKP 411

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 412 VVIRASKQWFVNITDIKTTAKELLKKVKFIP 442



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 171/347 (49%), Gaps = 36/347 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 628 PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 687

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 688 VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 747

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 748 ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 801

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 802 WIKTSSIWKK----------PGLEEAIESACAMRDSFLGSIPGKNAAEYEVIVVIEPGLL 851

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIP-YSGEYLV--EGKD---- 625
             + EM  A+  + T  L  + + SQ  +L   P G+  ++    G +L+  EG D    
Sbjct: 852 FEIMEMLQAEETSSTSQLNELMMASQTTLLSQEPRGISEDVTELKGTFLINLEGGDIREE 911

Query: 626 ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
              KV +  +  E  KC RCW Y+ +        TLC RC EV+  +
Sbjct: 912 SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVKAK 951


>gi|367051837|ref|XP_003656297.1| hypothetical protein THITE_2120730 [Thielavia terrestris NRRL 8126]
 gi|347003562|gb|AEO69961.1| hypothetical protein THITE_2120730 [Thielavia terrestris NRRL 8126]
          Length = 897

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/339 (42%), Positives = 197/339 (58%), Gaps = 34/339 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V ADW+  + T+D  YE  Q+ +F +M+ +G +YR  KPV+WSPSS TALAE
Sbjct: 60  MQSFRTYAVMADWDARWTTMDTAYEIRQLRLFQRMARRGLVYRRYKPVYWSPSSGTALAE 119

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVSR+ Y  FR+V    +  G +  F   L   VWTTTPWT+PAN A+AV+ 
Sbjct: 120 AELEYNEAHVSRAAYVRFRVVDGYGALPG-MEGFEGRLFAVVWTTTPWTLPANRAIAVHE 178

Query: 121 KLQYAVVEIQSLLEGDSAAPA-NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 179
            L Y +V + +    D+   A N   R   VL  +     +V                  
Sbjct: 179 DLAYHIVRVGA----DAFLVAENCLERVAKVLGGETAAPEVVG----------------- 217

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
             T+ GS L   RYV+ +  +   +   I G ++T  SG+GLVH APGHG +DY+  L  
Sbjct: 218 --TVKGSQLTQLRYVNLLRGKSAELQPFIHGSFVTEGSGSGLVHCAPGHGFDDYLACLSL 275

Query: 238 GLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           G+P+ +PVD++G FTEEA      +  G+ VL  G+ AV++ L + +  + E  Y HKYP
Sbjct: 276 GIPVSAPVDNDGLFTEEAYPDQPDRLKGISVLDGGSAAVLELLGDDVLDVHE--YRHKYP 333

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTK+P I RAT QWFA V+  +Q A+ AI +V++VP
Sbjct: 334 YDWRTKQPIIIRATAQWFADVDTIKQEALAAIDEVRFVP 372



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 56/354 (15%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S DYTGD+++G  VL+ +     K R T++ L G++H      S     L
Sbjct: 577 GPDALRLWVASSDYTGDIVLGEPVLKTIHQALLKYRTTIKMLTGSMH-----ASARTAPL 631

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQ AL QL +++  +   Y++Y+F K F  + R++  DLS FY +  KDRLY     
Sbjct: 632 TAVDQIALLQLRDVMAEVGAHYDAYEFNKAFGCLNRWLTNDLSAFYLEALKDRLYCADGG 691

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-------------------FAY 499
                     L    + ++R++AP+ P L E+ W++ P                     +
Sbjct: 692 G--------ALEPIFVGLLRMLAPLTPVLVEEAWEHRPAWMKEEEEKGENGGAAQQQQQH 743

Query: 500 TLEDGSAAEFVFESKWPVLDEKWR-TFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGS 558
            L     A  V  ++  + + + R   PV        ++ +   +   LE AR  KL+GS
Sbjct: 744 PLRQLYDAPLVDPARLTIDEAELRGAVPV--------LMRVHAAIKAALETARADKLLGS 795

Query: 559 SLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGE 618
           SL+  V L   +       R + T +  +D L+ +F++S VE+  + P G         E
Sbjct: 796 SLQCAVVLQVPEGG-----RVLRTLRRFSDELEAMFVVSSVELNGAVPEGEGAQWKRCEE 850

Query: 619 YLVEGKD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL--AVQ 669
           + ++G+  K W+   +   +KC RCW +        +   LC+RC EV+  AVQ
Sbjct: 851 FELDGEACKAWVLPPKQ--AKCPRCWRFVAP-----QEDQLCARCEEVVGEAVQ 897


>gi|366088730|ref|ZP_09455203.1| isoleucyl-tRNA synthetase [Lactobacillus acidipiscis KCTC 13900]
          Length = 932

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 199/331 (60%), Gaps = 33/331 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV A+WN PY++LDP +EA +I VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAAEWNRPYVSLDPSFEAHEIRVFGKMAEKGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y   +++       G+L+E   +  + VWTTTPWT+P +  + ++A  
Sbjct: 198 VEYHDVTSPSAFYGE-KVIDG----RGVLDE--DETYMVVWTTTPWTIPGSEGITIDAGF 250

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YAVV+ +                      D+KK   ++A++LV      +G  K+ + K
Sbjct: 251 DYAVVQPEG---------------------DEKK--YVLAAELVDQNAELFGWQKVQVLK 287

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ GS+LEN    HP    +  V + GD++T ++GTGLVHTAPG G++D+    +YGL I
Sbjct: 288 TVKGSELENVLTEHPFYPERKLVTMLGDFVTLDAGTGLVHTAPGFGEDDFNVGQQYGLDI 347

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           + PVDD+G  T EAG  F G+    D N   +  L++   L+ E  YEH YP+DWRTKKP
Sbjct: 348 VVPVDDKGYLTAEAGPDFEGV-FYDDANQISLDKLEKAGLLLREMDYEHSYPFDWRTKKP 406

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  RQ  +D I  VK+ P
Sbjct: 407 IIFRATPQWFASVDKIRQQILDQIDGVKFFP 437



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 178/343 (51%), Gaps = 36/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWVSSVD + DV +     +Q+S+ YRK+R T+R+LL N  D+  
Sbjct: 608 VPEKVIKQMGAEIIRLWVSSVDSSADVRVSMGSFQQISESYRKIRNTIRFLLANTTDFDP 667

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + + Y +L  ID+Y   ++ +  K++ + Y  Y F  I++ +  FI +DLS FY DVA
Sbjct: 668 ETDQVPYQELESIDKYMQVRINHFTKDVLDDYAKYDFMNIYKRLINFITIDLSAFYLDVA 727

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL    + + +++ PI+PH  E++W+ L            E
Sbjct: 728 KDIVYIEAADSHKRRSMQTVLYDVAVRLTKLLTPIIPHTTEEIWKYLK--------EPEE 779

Query: 509 FVFESKWPVLDEKWRTFPVGEIYF---WGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
           FV  ++ P +D     F  GE      W + +++R+ V K LEVAR  KLIG S EA V 
Sbjct: 780 FVQLAEMPAVDH----FD-GEAKLLANWEEFMKIRSHVFKSLEVARDQKLIGKSFEAHVD 834

Query: 566 LFTDDASLASRLREMCTAKHDADT-LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
           L+  D+     +R++     D DT +++  I+S ++         +++   + E   +  
Sbjct: 835 LYVTDS-----VRQLLD---DLDTDVRQALIVSGLD---------LKDFSKASE-TADKF 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           DKV + V+ A G  C RC      VG     P LC  C  ++ 
Sbjct: 877 DKVAVQVTHAAGEVCPRCRMIKKDVGQDAHFPELCQNCASIVT 919


>gi|301066333|ref|YP_003788356.1| isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438740|gb|ADK18506.1| Isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 948

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 158 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 217

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 218 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 269

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 270 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 303

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 304 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 362

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 363 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 421

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 422 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDAKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 803 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 849

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 850 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 893

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 894 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 934


>gi|385823183|ref|YP_005859525.1| isoleucyl-tRNA synthetase [Lactobacillus casei BD-II]
 gi|327385510|gb|AEA56984.1| Isoleucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 948

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 158 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 217

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 218 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 269

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 270 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 303

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 304 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 362

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 363 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 421

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 422 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 803 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 849

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 850 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 893

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 894 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 934


>gi|227535231|ref|ZP_03965280.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227187115|gb|EEI67182.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 948

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 158 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 217

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 218 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 269

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 270 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 303

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 304 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 362

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 363 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 421

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 422 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K I+ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQIKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 803 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 849

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 850 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PANAEQF----D 893

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 894 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 934


>gi|417989540|ref|ZP_12630044.1| isoleucyl-tRNA synthetase [Lactobacillus casei A2-362]
 gi|410537927|gb|EKQ12489.1| isoleucyl-tRNA synthetase [Lactobacillus casei A2-362]
          Length = 928

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|418007883|ref|ZP_12647755.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW4]
 gi|410547968|gb|EKQ22189.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW4]
          Length = 928

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 185/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTLAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+   LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFVALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|191638284|ref|YP_001987450.1| isoleucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|409997146|ref|YP_006751547.1| isoleucine--tRNA ligase [Lactobacillus casei W56]
 gi|254782413|sp|B3WDZ1.1|SYI_LACCB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|190712586|emb|CAQ66592.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus casei BL23]
 gi|406358158|emb|CCK22428.1| Isoleucine--tRNA ligase [Lactobacillus casei W56]
          Length = 928

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|418004993|ref|ZP_12644994.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW1]
 gi|410548121|gb|EKQ22337.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW1]
          Length = 928

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 184/341 (53%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV+ VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVAMVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+   LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFVALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|239631632|ref|ZP_04674663.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|417980578|ref|ZP_12621258.1| isoleucyl-tRNA synthetase [Lactobacillus casei 12A]
 gi|239526097|gb|EEQ65098.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|410524901|gb|EKP99808.1| isoleucyl-tRNA synthetase [Lactobacillus casei 12A]
          Length = 928

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDAKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|417992794|ref|ZP_12633146.1| isoleucyl-tRNA synthetase [Lactobacillus casei CRF28]
 gi|410532585|gb|EKQ07287.1| isoleucyl-tRNA synthetase [Lactobacillus casei CRF28]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 185/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVTTVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++Y++L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYNELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G   + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGIDPKLPQLCSRCAAIV 914


>gi|403277474|ref|XP_003930385.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Saimiri
           boliviensis boliviensis]
          Length = 1012

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 191/330 (57%), Gaps = 25/330 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEAE
Sbjct: 198 AFIRWGIMADWNNCYFTFDGKYEAKQLRTFYQMYEKGLVYRSYKPVFWSPSSRTALAEAE 257

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   HVSRSIY  F ++   P  + L++   P +   +WTT PWT+PAN AV    + 
Sbjct: 258 LEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLIWTTQPWTIPANQAVCYMPES 316

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV               K S+ G++         ++A+D V ++ +   T      T
Sbjct: 317 KYAVV---------------KCSKSGDLY--------VLAADKVASVASTLETTFETIST 353

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G +LEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+ 
Sbjct: 354 FSGVELENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMD 413

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP 
Sbjct: 414 CLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPV 473

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           + RA++QWF ++   +  A + + +VK++P
Sbjct: 474 VIRASKQWFINISDIKTTAKELLKKVKFIP 503



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 170/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689  PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLQTFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++PF          + VF + 
Sbjct: 809  EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPFI------KEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYRVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 913  FEIIEMLQSEETSSTSQLNELMMASETTLLAQEPREMTADVIELKGKFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC E ++
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCTEAVS 1010


>gi|417998986|ref|ZP_12639199.1| isoleucyl-tRNA synthetase [Lactobacillus casei T71499]
 gi|410539926|gb|EKQ14448.1| isoleucyl-tRNA synthetase [Lactobacillus casei T71499]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTQA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|116494771|ref|YP_806505.1| isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263811|sp|Q039Q9.1|SYI_LACC3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116104921|gb|ABJ70063.1| Isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 195/330 (59%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE+
Sbjct: 139 FKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN +  
Sbjct: 199 EYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y  V++            +KK               +VA++L+  +  E  W    ++ K
Sbjct: 251 YVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL-K 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP+
Sbjct: 285 TFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLPV 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP 
Sbjct: 344 VSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 403 IFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTQA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|418010739|ref|ZP_12650510.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lc-10]
 gi|410553318|gb|EKQ27321.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lc-10]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|417983354|ref|ZP_12623992.1| isoleucyl-tRNA synthetase [Lactobacillus casei 21/1]
 gi|417996143|ref|ZP_12636426.1| isoleucyl-tRNA synthetase [Lactobacillus casei M36]
 gi|418014872|ref|ZP_12654461.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lpc-37]
 gi|410528300|gb|EKQ03153.1| isoleucyl-tRNA synthetase [Lactobacillus casei 21/1]
 gi|410535852|gb|EKQ10462.1| isoleucyl-tRNA synthetase [Lactobacillus casei M36]
 gi|410552694|gb|EKQ26709.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lpc-37]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++Y++L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYNELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P   E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTKA-----PADAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 194/330 (58%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R G+  +W NPY+TL PE+EA QIEVFG+M+ +GYIY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKGYIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +  A             D    +WTTTPWT+PAN  +++N +  
Sbjct: 199 EYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFVIWTTTPWTLPANLGISLNPEFV 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           Y VV           A ANKK               I+A DL+ T+    +W    V+++
Sbjct: 251 YVVV-----------AVANKK--------------FIIAKDLLETVATALEWEAYEVVQE 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G  L+     HP  +R   V++ G+++T ++GTG VHTAPGHG++DY  S +YGL I
Sbjct: 286 -VKGEVLDRIVAQHPFYDRDSLVMV-GEHVTADAGTGCVHTAPGHGEDDYHISKQYGLDI 343

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+D+ G +T+EA  F G+    D N  V + L E  +L       H YP+DWRTKKP 
Sbjct: 344 LSPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVDALESLGFISHSYPHDWRTKKPV 402

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RAT QWFASVE FR   ++A+    + P
Sbjct: 403 IYRATPQWFASVEAFRGELLEAVKATAFTP 432



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 198/344 (57%), Gaps = 36/344 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 602 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNITDFDP 661

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++Y +L  +DQY   +L++++K +R +Y  Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 662 TKDRVAYAELREMDQYVYMRLQDVLKTVRAAYNRYDFAAVYHVVNNFVAVELSSFYLDIA 721

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA-- 506
           KD +Y  G+ +  RR+ QTV+   L+++V+++ PI+PH  +++W  L     +E+ S   
Sbjct: 722 KDVVYIEGSDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYLHAQGIVEEASVQL 781

Query: 507 AEFVFE---SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
            +F  E   + +  L  KW            KI+++R ++ K LE AR  K IG SLEAK
Sbjct: 782 TDFPMENVQANFENLRAKWE-----------KIIDVRDDILKALEEARNAKTIGKSLEAK 830

Query: 564 VYLFTDDASLASRLREMCTAKHDADT-LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE 622
           V ++  +        ++ +  +DA+    ++ I+S  EV        I   P     L  
Sbjct: 831 VTVYAKE--------DIVSLLNDANIDFAQLSIVSAFEV------ATIEEAPADALVL-- 874

Query: 623 GKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V I V +A G KCERCW+ +  VG+   HPT+C+RC EV+
Sbjct: 875 --EHVSIVVEKATGEKCERCWSITETVGANEAHPTVCARCAEVV 916


>gi|418001914|ref|ZP_12642042.1| isoleucyl-tRNA synthetase [Lactobacillus casei UCD174]
 gi|410545359|gb|EKQ19659.1| isoleucyl-tRNA synthetase [Lactobacillus casei UCD174]
          Length = 928

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 187/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTQA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|374340808|ref|YP_005097544.1| isoleucyl-tRNA synthetase [Marinitoga piezophila KA3]
 gi|372102342|gb|AEX86246.1| isoleucyl-tRNA synthetase [Marinitoga piezophila KA3]
          Length = 917

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/388 (37%), Positives = 205/388 (52%), Gaps = 58/388 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL+P YEA  + +  +++  G I+R KKP++W PS  TALAEAE
Sbjct: 139 EFKRLGVRGDWEHPYVTLEPAYEAKVLGIVKKLTEDGNIFRSKKPIYWCPSCETALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F M   P +             + +WTTTPWT+PAN A+A++ + 
Sbjct: 199 IEYHD-HTSPSIYVKFEMEDEPGTY------------IVIWTTTPWTLPANVAIALHPEY 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKK 181
            Y  + +     G+                       I+A  LV  L    G  K  + +
Sbjct: 246 DYVKISV-----GEEKW--------------------ILAEALVENLMKVAGIEKYEVLE 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G DLE  +  HP  +R+  +V+  DY+T E GTG VHTAPGHG +DY T L+Y LP+
Sbjct: 281 KFKGKDLEYKKAKHPFMDRESLIVLA-DYVTLEDGTGCVHTAPGHGADDYQTGLRYKLPV 339

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSPV+ EG FT EAGK++GL +    N  +++ L E   LI      H YP+ WR K P 
Sbjct: 340 LSPVNHEGVFTNEAGKYAGLHIW-KANKIIIEDLKESGHLIARADITHSYPHCWRCKNPV 398

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSS 349
           IFRATEQWF SV+    RQ A+D I  V+W+P           Q+ P +     R W   
Sbjct: 399 IFRATEQWFISVDSNNLRQKALDEIKNVEWIPEWGENRITAMVQDRPDWCISRQRAWGIP 458

Query: 350 V-----DYTGDVMIGPQVLRQMSDIYRK 372
           +     +  G+  + P+VL ++ +I  K
Sbjct: 459 IPALYCEDCGETFLDPEVLDKVIEIVEK 486



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 187/330 (56%), Gaps = 29/330 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DY GD+ +  ++L+Q +++YRK R T+R+LLGN  D+    +++ Y+
Sbjct: 611 YGADILRLWVASSDYRGDIKVSFEILKQQTEVYRKYRNTIRFLLGNTSDFDPEVDAVPYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  +D++A+ ++  ++K + E+YE+Y+FF++  +I  F  V++S+ Y D+ KDR+YT  
Sbjct: 671 EMEELDKWAMMKIHQLIKKVTEAYENYEFFRVHHLINNFCTVEMSSMYLDIIKDRIYTEL 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QTV+   L+++ +++ P+L    E+++  LP           E V   +WP
Sbjct: 731 PKSRLRRSAQTVMYEALVALTKLMVPLLAFTTEEIYSYLP-------TKKYETVQLEEWP 783

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++EK+    + E   W KI +LR +V K LE  R  K IG  L+AK+ +      L   
Sbjct: 784 EVNEKYFDKELEEK--WNKIFQLREDVTKALEEKRREKFIGHPLDAKIIVEPKSEELKEI 841

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L     A +D   +  +FI SQ E L S   G      Y GE+         + V +AEG
Sbjct: 842 L-----ASYDPYFVADLFITSQFE-LGSVDEG------YEGEFAK-------VKVVKAEG 882

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCW    +VG+  ++P  C RC  VL
Sbjct: 883 KKCERCWKIHPEVGNNEKYPDACPRCIAVL 912


>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 932

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 196/333 (58%), Gaps = 38/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G KP++WSPSS ++LAEA
Sbjct: 137 SDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKGAKPIYWSPSSESSLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S S+Y  F+        + +  +   D    +WTTT WT P+N  + V+  
Sbjct: 197 EIEYQDVK-SPSLYVAFK-------ANDVQGKVPADTEFVIWTTTAWTFPSNRGIFVHPD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLVI 179
             Y VV+++           N+K               ++A DL+ T+  K  W    V+
Sbjct: 249 YDYIVVQVE-----------NRK--------------FLIAKDLLETVSEKIGWENPQVL 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            +T+ GS+LE     HP  +R   V++ GDY++ +SGTGLVHT+P HG++DY  S KY L
Sbjct: 284 -QTIKGSELEYMTAKHPFYDRDSLVMV-GDYVSLDSGTGLVHTSPNHGEDDYQYSRKYKL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P++  +D +G FT EA  F G     +    V++ +     L+  E + H YP+DWRTKK
Sbjct: 342 PVIEDIDAQGYFTAEAEGFEG-QFYDNVEELVLEKMRATDRLLHIEHFVHSYPHDWRTKK 400

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           P I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 401 PVIYRATPQWFASIDQFRQNILDEVERVDWVIP 433



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 177/350 (50%), Gaps = 41/350 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           +P      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 LPKDVTKKFGADILRLWVASIDAESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 503
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 504 GSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLE 561
             AAE                 P  E     W + L+ R ++ K LE AR  KLIG SLE
Sbjct: 783 PEAAE----------------IPGSEELLGNWQEFLDFRDKILKALESAREAKLIGKSLE 826

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
           A V ++ ++      +R + TA    + + ++ I+S   V     N  + N P S     
Sbjct: 827 ATVTIYPNEV-----VRTLLTAID--ENVAQLLIVSNFVV----ANEPVNNAPESAMKF- 874

Query: 622 EGKDKVWIGVSRAEGSKCERCWNYSTQVGSFV-EH-PTLCSRCYEVLAVQ 669
              D + + V  A G  C+RC      VG    EH   LC  C  ++  +
Sbjct: 875 ---DDLAVLVEHAAGEVCDRCRRTDETVGHNANEHLKMLCEHCAHIVETE 921


>gi|302507938|ref|XP_003015930.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
 gi|291179498|gb|EFE35285.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
          Length = 1012

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 197/344 (57%), Gaps = 40/344 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 149 MEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY E H+S +    F + + P   S +L   L    D+   +WTTTPWT+PANAA+A
Sbjct: 209 AELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGNDISAVIWTTTPWTLPANAALA 265

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           VN   +Y +V+                +R G +L  Q ++       L   LE  +    
Sbjct: 266 VNPDFEYTIVD---------------STRHGKLLVAQSRL-----QYLQELLEDDF---T 302

Query: 178 VIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           V+   + GS+L N  Y      P   +Q   +I  +++T ++G+G+VH APGHG EDY  
Sbjct: 303 VVIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAAEFVTADAGSGIVHCAPGHGMEDYEA 360

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+P  +PVD EG+FT+ A        +G +VLGDGN AV+K+L E   LI +  Y+
Sbjct: 361 CLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYK 420

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 421 HKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 464



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 30/339 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
             +RR+ QT L      I  ++ PI+P L E+ W++ P           +  F+  +   
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTPGNIK----RCLKHPFQRTFKSP 853

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRL 577
           D +W+   +   Y    ++   + +  + E AR+ K +GSSL++ V+L   +   ++ +L
Sbjct: 854 DSQWKNDTLEHEY--SAMVAANSAIKAMQETARSKKQMGSSLQSFVHLVLPEGFEISEQL 911

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-----PYSGEYLVEGKD--KVWIG 630
           +           L   F++S V + P   + ++ +I      YS E+ +      K W  
Sbjct: 912 QS---------ELPDFFVVSSVTIGPEC-DSVLNDITQAEWSYSSEFKLPNDQIGKAW-- 959

Query: 631 VSRAEGSKCERCWNYSTQ---VGSFVEHPTLCSRCYEVL 666
           V     +KC RCW Y+ Q    GS  E   LC RC EV+
Sbjct: 960 VYTPTQAKCPRCWRYAVQPAETGSKDEE-DLCHRCEEVV 997


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/344 (41%), Positives = 189/344 (54%), Gaps = 44/344 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV   W  PYLT+D  YEAA    F    L G + R +KPVHW  S RTALAEAE+
Sbjct: 140 FQRLGVLGHWQQPYLTIDYRYEAAIAREFNNFLLNGLVSRSRKPVHWCASCRTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPST-----SGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           EY +   S SIY  F +  A           L  +  P+L L +WTTTPWT+PAN AVA+
Sbjct: 200 EYAD-QTSPSIYVKFPLQPAAAKALAEKHPNLSPDLFPNLFLVIWTTTPWTLPANVAVAL 258

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KL 177
           +    YA VE+     G++                     +I+A +LV  + A  G  + 
Sbjct: 259 HPDFTYAAVEVN----GET---------------------LIMAEELVEQVAAACGLGEY 293

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            +  TLA +DL     +HP   R    +I  DY+T E+GTG VHTAPGHG+EDY++ LK+
Sbjct: 294 RVVTTLAAADLLGHSCLHPFMGRDS-RIIAADYVTLEAGTGCVHTAPGHGREDYLSGLKH 352

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            LP+LSPVDD G FT E G ++G+ +L  GN  ++  L +  +L+ E+   H YP+ WR 
Sbjct: 353 DLPVLSPVDDRGHFTAEGGPYAGMFIL-KGNKQIIADLQQSGALLGEQKISHSYPHCWRC 411

Query: 298 KKPTIFRATEQWF------ASVEG----FRQAAMDAIGQVKWVP 331
           KKP IFRATEQWF      A + G     R+ A+ AI    W+P
Sbjct: 412 KKPVIFRATEQWFIGMDIPAGIAGEQTTLREKALKAINNADWIP 455



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 188/357 (52%), Gaps = 22/357 (6%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    +IG V   P Q    +GA++LRLW +S DY  D+ I   +L+Q++D YRK
Sbjct: 610 VDGKGKKMSKSIGNVI-APGQIIEKHGAEILRLWAASEDYRDDIRISDNILKQLADAYRK 668

Query: 373 LRGTLRYLLGNLHDW--RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           +R T+R+LLGNLHD+      +    ++  +D++ L + E + +  R  Y+S++F +++ 
Sbjct: 669 IRNTVRFLLGNLHDFDPTAPGAPPEAEMDELDRWILARFEQLKEKTRTGYDSFEFHQVYH 728

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  V LS  Y D+ KDRLYT       RR+ Q V+      ++R++APIL  LA +
Sbjct: 729 GLYNFCTVSLSALYLDIVKDRLYTMPADHPQRRAAQAVMYEICDGLLRLLAPILSFLAAE 788

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
            W+ LP      D      VF + +P    + R      +  W KIL LR+E  + LE+A
Sbjct: 789 AWEYLPV-----DQEREASVFLASFPEARPQ-RLADQELLAKWDKILALRSEFTRALEIA 842

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K+IG SL+A+V +     +   +  E   A  + DTLQ + I+S +    + P G  
Sbjct: 843 RRDKVIGHSLDAEVVV-----AAQGQWAEFIAA--NWDTLQLVTIVSAMRREEALPAG-A 894

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            NI Y GE + +    + + V  A G KCERCW  +  VG    HP +C RC E + 
Sbjct: 895 ENI-YHGEEIAD----LQVLVRPAPGEKCERCWMRAESVGDNTNHPGICYRCSEAIG 946


>gi|320101891|ref|YP_004177482.1| isoleucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749173|gb|ADV60933.1| isoleucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 972

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 187/332 (56%), Gaps = 25/332 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R GV  DW  PYLTLD  YEA  ++V   +  +GY++R KK +HW    RTALAEA
Sbjct: 143 AQFQRLGVLGDWQRPYLTLDHRYEAGIVDVLADLVEKGYVFRQKKAIHWDIHDRTALAEA 202

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY +   S SIY +F M S  PS  G   E   D    +WTTTPWT+PAN A+AV+ +
Sbjct: 203 ELEY-QDITSPSIYVLFPMTSGVPSCWGGQPE---DWSAMIWTTTPWTLPANLAIAVHPR 258

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L YA V  +     D    A ++     VL  Q  V  ++A   V        ++  I  
Sbjct: 259 LDYAGVRYR-----DPETGAERR-----VLLCQSLVAKVMAERSV--------SQYDIVG 300

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G+DLE   Y H   +R    V+  DY+  E GTGLVHTAPGHG EDY T L YGLP 
Sbjct: 301 VCKGADLEIATYRHVFLDRTGRFVL-ADYVAAEDGTGLVHTAPGHGAEDYRTGLAYGLPA 359

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             PVD+ G++T++A  +     + + N  VV+ L E  +L    P  H YP+ WR+KKP 
Sbjct: 360 YCPVDESGRYTDDAPDWLRGKGVFEANPLVVQRLKEDGTLFHSAPVRHSYPHGWRSKKPI 419

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRATEQWF  V+  G RQ  ++ IGQV W+P
Sbjct: 420 IFRATEQWFIKVDHNGLRQRVLEQIGQVTWLP 451



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 177/347 (51%), Gaps = 39/347 (11%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP  E   YGADVLRL+V+S+DY  DV +G   +++ S+ YRK+R T R+LL NL D++ 
Sbjct: 639 VPATET--YGADVLRLYVASMDYADDVRVGETGIKEASEAYRKIRNTFRFLLANLEDYQR 696

Query: 390 GNSISY----DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYF 445
            +   +     DL  +D++ L +L  ++++   SY +++F+++ Q I +F+ VDLS+FY 
Sbjct: 697 FDPERHAPQPSDLVELDRWILGRLNALIRDCEASYNAFEFYRVVQKITQFVNVDLSSFYL 756

Query: 446 DVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 505
           D  KDRLY        RRS Q  L      + R+++PIL H  E++W+ LP       GS
Sbjct: 757 DAIKDRLYAELPEGPERRSAQFALFRLHDVLTRLLSPILVHTCEELWERLP-------GS 809

Query: 506 AA----EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLE 561
           AA    E V  +  P  D ++    + +   W  +  +R++  + LE  R  K+IGSS +
Sbjct: 810 AATAKPESVHLALAPQPDPRFDDQTLADK--WTTLRAVRSDCLRELERLRQSKIIGSSQQ 867

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
            ++ + T D  L                  R  + S  + L +        +       V
Sbjct: 868 GRLAIATADPQL------------------RGLLESSRDALATVCVVSEVEVVADHPEAV 909

Query: 622 EGKD--KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            G D  ++ +  +++   +CERCWN+   VGS   HP LC+RC  V+
Sbjct: 910 PGVDEPRIRVFAAKSPHRRCERCWNHYASVGSDPRHPDLCARCVRVV 956


>gi|449270246|gb|EMC80942.1| Isoleucyl-tRNA synthetase, mitochondrial, partial [Columba livia]
          Length = 926

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 190/335 (56%), Gaps = 25/335 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADW+N Y T DP+YEA Q+ VF +M  +G IY+  KPV WSPS++TALAEA
Sbjct: 108 SAFIRWGVMADWDNCYRTSDPKYEANQLRVFYKMYDKGLIYQDYKPVFWSPSTKTALAEA 167

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E HVSR++Y  F ++ +PP  + +++   P   + VWTT PWTVPAN AV     
Sbjct: 168 ELEYNEKHVSRAVYVKFPLLKSPPKLASVIDGSSP-ASVLVWTTQPWTVPANQAVCYMPD 226

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y++V+  +  E                         I+A+D V +  A   T+  +  
Sbjct: 227 SAYSIVKCTTTGEQ-----------------------FILAADRVESTAAILDTQFEVMS 263

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G DL +    HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + L  
Sbjct: 264 TCKGVDLADGSCAHPTIPGRVSPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHHQLST 323

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FTE AG +    +VL +GN AV++ L    SL+ EE Y H YPYDWRTKKP
Sbjct: 324 DCLVDEGGFFTEAAGPQLKNKNVLEEGNEAVIQMLQAAGSLLKEEKYVHSYPYDWRTKKP 383

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 335
            I RA++QWF +    + AA + + +VK +P   A
Sbjct: 384 MIIRASKQWFVNTASVKAAAQEVLKKVKVIPTSAA 418



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 167/346 (48%), Gaps = 38/346 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGNL  +    +SI 
Sbjct: 600 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNLAGFSPETDSIP 659

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 660 ASEMYIVDQYMLHLLQDYGSKVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFTIIKDRLYC 719

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q LP+         +E VF + 
Sbjct: 720 EEEKDPKRRSCQTVLAQALDIVVRSFAPILPHLAEEVFQYLPYK------KDSEGVFRTG 773

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+   + E            E    +  +  G + G +      +   +  L 
Sbjct: 774 WINASSAWKKPGIEEA----------IEGACAMRDSFLGSISGQNALEYEAVIVIEPGLL 823

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIPYS-GEYLV--EGKD---- 625
             L E   A+  +    L  I + SQ  +L   P     +   + G +L+  EG D    
Sbjct: 824 FELMEALQAEETSSVSQLNEIMMASQTTLLSELPKETPADANITKGTFLINLEGGDIREE 883

Query: 626 ----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                + + +++A   KC RC  Y++   S       C RC +V+A
Sbjct: 884 SSYKVIALPIAKA---KCPRCRRYTSDSSS-----APCPRCLKVIA 921


>gi|225680312|gb|EEH18596.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1027

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 195/340 (57%), Gaps = 33/340 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+++ V ADWNN + T+D  +E  Q++VF +M  +G I R  KPV+WSPSSRTALAE
Sbjct: 159 MKGFRQWAVMADWNNSWKTMDKNFEKQQLDVFLKMVEKGLINRRFKPVYWSPSSRTALAE 218

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H S +    F + S P     +L    P++   +WTTTPWT+PANAA+AV+ 
Sbjct: 219 AELEYREDHKSIAALVKFPLTSIPSKLRDMLPGDTPEISAVIWTTTPWTLPANAAIAVSP 278

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLV 178
            L+Y+VV                        K +   ++++ S  +  L+   + G   V
Sbjct: 279 TLEYSVV------------------------KSENHGYLLIGSLRLEYLQTLLQEGEIAV 314

Query: 179 IKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           +   L G +L +     P+  D      +I  D++T ++G+GLVH APGHG EDY   L 
Sbjct: 315 VGSPLLGYELGSQATYRPLFKDESVSQPIIVADFVTADTGSGLVHCAPGHGMEDYEVCLA 374

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
           +G+   +PV+DEG FT+EA        SG  VLG+G   V+KY++ +  L+ +  YEHKY
Sbjct: 375 HGIAAHAPVNDEGLFTDEAIPSNPSLLSGKPVLGEGYKDVLKYVENKGQLLAKHIYEHKY 434

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTK P I RAT+QWFA V   R  A+ A+  V+++P
Sbjct: 435 PYDWRTKLPVIVRATKQWFADVGDIRHDALRALKDVQFIP 474



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 169/334 (50%), Gaps = 27/334 (8%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++IG  VL+ ++    K R T R LLG+L D+   ++I Y+ L
Sbjct: 689  GPDSLRLWVASSDYTKDIIIGEPVLKAVNTSLHKYRMTFRLLLGSLQDFDPKSAIPYESL 748

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL N+V   +++Y +++F+K    I ++  ++ S FY +  KDRLY     
Sbjct: 749  HIIDKIALLQLRNLVNKCQDAYLNFEFYKAVTAINKWANLEFSAFYIESLKDRLYADSVN 808

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF---ESKW 515
            S +RR+ QT L         ++ P++P L E+ W++ P A   E G   + V     ++W
Sbjct: 809  SLSRRAAQTTLCHIYYHFQGILGPVVPLLVEESWEHTPEAIKAEFGHPLQRVMTEPAAEW 868

Query: 516  PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
               DE  R+F +        ++ + T +N + E AR  K +GSSL++ VY+     SL  
Sbjct: 869  QD-DELERSFLL--------LMAVNTAINTMQENARNKKEMGSSLQSFVYI-----SLPC 914

Query: 576  RLREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEG---KDKVW 628
               E          LQ +F++S V V     P  P        Y  ++   G      VW
Sbjct: 915  GAAEAPVFAQFGAELQDLFVVSSVTVGYNNAPVPPEIEASAWKYRSDFQFPGDVQSGSVW 974

Query: 629  IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            I   +A  +KC RCW Y+  +    ++P LC RC
Sbjct: 975  IYTPQA--NKCGRCWRYAVPLECKKDNP-LCHRC 1005


>gi|320585805|gb|EFW98484.1| isoleucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 979

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/343 (40%), Positives = 197/343 (57%), Gaps = 33/343 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+R+GV ADW+  + T+D  YE  Q+ +F Q+  +G IYR  KPV+WSPSSRTALAE
Sbjct: 134 MREFRRFGVMADWDGRWRTMDAAYEVRQLRLFQQLVHKGLIYRRYKPVYWSPSSRTALAE 193

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + H+S + +  F +V        L       L   +WTTTPWT+PAN A+AV+ 
Sbjct: 194 AELEYSDRHLSTAAFVQFPIVGGVGRLDCLAGLRPGPLSAVIWTTTPWTLPANEAIAVHR 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL--- 177
            L YAVV I++     S AP                 +++VA   + T  +    +    
Sbjct: 254 DLDYAVVRIRT---DSSDAPE----------------YLLVAEACLETFSSMCCREPDML 294

Query: 178 --VIKKTLAGSDLENCRYVHPVDNR--QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
             V+ + + GSDL   +YV+ +  R  Q   +I   ++T  SG+GLVH APGHG EDY  
Sbjct: 295 SDVVARAIPGSDLLGLQYVNSLRGRSAQPQPIIHASFVTAGSGSGLVHIAPGHGFEDYEV 354

Query: 234 SLKYGLPILSPVDDEGKFT-----EEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            + +GLP+ +PVD EG+FT     +E  + +GL V G+G  AV+  L    +++    Y+
Sbjct: 355 GMSHGLPVPAPVDGEGRFTDAAFPDEPARLTGLSVQGEGGTAVLALLGS--AVLATHRYQ 412

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWRTKKP I RAT QWFA V   + AA+ ++  V++VP
Sbjct: 413 HKYPYDWRTKKPIIVRATAQWFADVAEIKAAAVASLQTVQFVP 455



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 51/349 (14%)

Query: 335 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 391
           AP Y   G D LRLWV++ DYTGDV++   VL+ +     + R  ++ LLG++H+     
Sbjct: 664 APVYDALGPDALRLWVATSDYTGDVVLSQAVLQAVHTTLTRYRTMIKMLLGSMHE----- 718

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           S     L  +D  A+ QL + + ++  ++  ++F+K    I R++  DLS FY + AKDR
Sbjct: 719 SARIAPLTTLDHMAVLQLRDAMADVAAAFARFEFYKGMAGINRWLANDLSAFYLEAAKDR 778

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY              VL    L ++R++AP++P L E+ W + P            ++ 
Sbjct: 779 LYCADGGG--------VLEPIFLGLMRMLAPVVPMLVEEAWDHAP-----------AWLT 819

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVL----------EVARTGKLIGSSLE 561
           ES    L E ++   +      G   +LR  +  V+          E ART K++GSSL+
Sbjct: 820 ESTLHPLRELYKAPLIDVARLPGDEAQLRQAIPVVMAAHAAVKAASERARTDKVLGSSLQ 879

Query: 562 AKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV 621
             V L    +S A  L E+         L  +F++S V V  + P+       Y+  + V
Sbjct: 880 CSVVLEVPVSSAAELLNEL------GAELDAMFVVSSVAVNAAVPDHDSVAWRYAAPFEV 933

Query: 622 EGKD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
            G +   W+   R   +KC RCW Y  +     E   LC RC +V+  Q
Sbjct: 934 AGDNCTAWVLPPRQ--AKCPRCWRYVAE-----EEDQLCGRCADVVNHQ 975


>gi|296230059|ref|XP_002760545.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Callithrix
           jacchus]
          Length = 1009

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 190/330 (57%), Gaps = 25/330 (7%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEAE
Sbjct: 198 AFIRWGIMADWNNCYFTFDGKYEAKQLRNFYQMYEKGLVYRSYKPVFWSPSSRTALAEAE 257

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   HVSRSIY  F ++      + L++   P +   VWTT PWT+PAN AV    + 
Sbjct: 258 LEYNPEHVSRSIYVKFPLLKPSSKLASLIDSSSP-VSFLVWTTQPWTIPANQAVCYMPES 316

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV               K S+ G+        F I+A+D V ++ +   T      T
Sbjct: 317 KYAVV---------------KCSKSGD--------FYILAADKVASVASALETTFETIST 353

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+ 
Sbjct: 354 FSGVDLENGTCRHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMD 413

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             V+++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP 
Sbjct: 414 CLVNEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKPV 473

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           + RA++QWF ++   +  A + + +VK++P
Sbjct: 474 VIRASKQWFINIADIKTTAKELLKKVKFIP 503



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 166/343 (48%), Gaps = 32/343 (9%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 686  PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 745

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ +++Q F   +LSNFYF V KDRLY 
Sbjct: 746  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLQTFYTRELSNFYFSVIKDRLYC 805

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+ +Q++P  Y  E  S    VF + 
Sbjct: 806  EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEAFQHIP--YITEPKS----VFRTG 859

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +          +  L 
Sbjct: 860  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVTVVIEPGLL 909

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 910  FEIIEMLQSEETSSTSQLNELMMASETTLLAQEPREMTADVIELKGKFLINLEGGDIREE 969

Query: 626  -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                + V      KC RCW Y+ +        TLC RC E ++
Sbjct: 970  SSYKVIVMPTTKGKCPRCWKYTAESSD-----TLCPRCAEAVS 1007


>gi|417986649|ref|ZP_12627216.1| isoleucyl-tRNA synthetase [Lactobacillus casei 32G]
 gi|410525235|gb|EKQ00139.1| isoleucyl-tRNA synthetase [Lactobacillus casei 32G]
          Length = 928

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 194/331 (58%), Gaps = 38/331 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G KPV+WS SS + LAEAE
Sbjct: 138 DFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S SIY  F++V       GLL+    D  L +WTTTPWT+PAN  + VN + 
Sbjct: 198 IEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWTTTPWTIPANYGITVNPRF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIK 180
            Y  V++            +KK               +VA++L+  +  E  W    ++ 
Sbjct: 250 DYVQVQV-----------GDKK--------------YVVAAELLDRVAEEIGWENPKIL- 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  G D++     HP+ +R   +V+  D++T ++GTGLVHTAPGHG++DY   +KYGLP
Sbjct: 284 KTFKGMDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ++S VD +G   E A  F G+    D N  + + L ++ +L+  + + H YP+DWRTKKP
Sbjct: 343 VVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 402 VIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 186/341 (54%), Gaps = 33/341 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 505
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 506 AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            AE  F+ +  +LD             W   ++ R+EV K LE+AR  K+IG SLEA V 
Sbjct: 783 EAE-QFDDESQLLD------------IWSGFMDFRSEVQKALELARDNKVIGKSLEAAVT 829

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           ++  +      +R+M     DA+ +Q + I S  E+ P+T        P + E      D
Sbjct: 830 VYPSEP-----VRDMLD-DVDANVMQ-LLITSHFEIAPATTQA-----PANAEQF----D 873

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + + V  A+G  C RC    T +G+  + P LCSRC  ++
Sbjct: 874 DMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIV 914


>gi|340755474|ref|ZP_08692158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|421499743|ref|ZP_15946777.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme Fnf 1007]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|402269374|gb|EJU18708.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme Fnf 1007]
          Length = 931

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 209/339 (61%), Gaps = 25/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           V  + W V+ E+     V E   W KI ++R + NK+LE AR G  ++IG+SL+AK+  +
Sbjct: 789 VLLTDWYVMKEEHINEKVEEK--WAKIQKIRKDANKLLEKARQGENRIIGNSLDAKLQCY 846

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T++  L + L+E      + + L+   I+SQ+E+L             +GE   E KD +
Sbjct: 847 TENTDLKTFLQE------NQEVLETALIVSQIEILTEKTEAF-----SAGE---EYKD-L 891

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++ V  A+G KC+RCW YST++GS   HP +C RC  V+
Sbjct: 892 FLQVLHADGEKCDRCWKYSTELGSVEGHPHICPRCSSVV 930



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 199/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV   W +PYLTL P++EA Q+++FG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   +      + + LL +  F  +  + +WTTTPWT+PAN A+++N +
Sbjct: 201 EYHD-HTSPSIYVKMK------ANADLLEKISFPEEAYVVIWTTTPWTLPANVAISLNPE 253

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
            +Y V                 K+  GN         +I+  +L  T  A+ G +   + 
Sbjct: 254 FEYGVY----------------KTEKGN---------LILGKELAETAFAEMGIEAPELL 288

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   GS LE   Y HP  +R   +++ G ++T ++GTG VHTAPGHGQEDYV   +Y +P
Sbjct: 289 KEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMP 347

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I+SP++ +G  TEEAG  F+GL      N A++++L E   L+  +   H YP+DWR+K 
Sbjct: 348 IVSPINYKGYLTEEAGPLFAGL-FYEKANKAIIEHLTEIGLLLKMKEITHSYPHDWRSKT 406

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 407 PVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440


>gi|419840444|ref|ZP_14363834.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme ATCC 51357]
 gi|386907833|gb|EIJ72534.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme ATCC 51357]
          Length = 931

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 209/339 (61%), Gaps = 25/339 (7%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTG--KLIGSSLEAKVYLF 567
           V  + W V+ E+     V E   W KI ++R + NK+LE AR G  ++IG+SL+AK+  +
Sbjct: 789 VLLTDWYVMKEEHINEKVEEK--WAKIQKIRKDANKLLEKARQGENRIIGNSLDAKLQCY 846

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
           T++  L + L+E      + + L+   I+SQ+E+L             +GE   E KD +
Sbjct: 847 TENTDLKTFLQE------NQEVLETALIVSQIEILTEKTEAF-----SAGE---EYKD-L 891

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++ V  A+G KC+RCW YST++GS   HP +C RC  V+
Sbjct: 892 FLQVLHADGEKCDRCWKYSTELGSVEGHPHICPRCSSVV 930



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV   W +PYLTL P++EA Q+++FG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   +      + + LL +  F  +  + +WTTTPWT+PAN A+++N +
Sbjct: 201 EYHD-HTSPSIYVKMK------ANADLLEKISFPEEAYVVIWTTTPWTLPANVAISLNPE 253

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
            +Y V                 K+  GN         +I+  +L  T  A+ G +   + 
Sbjct: 254 FEYGVY----------------KTEKGN---------LILGKELAETAFAEMGIEAPELL 288

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   GS LE   Y HP  +R   +++ G ++T ++GTG VHTAPGHGQEDYV   +Y +P
Sbjct: 289 KEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMP 347

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I+SP++ +G  TEEAG  F+GL      N  ++++L E   L+  +   H YP+DWR+K 
Sbjct: 348 IVSPINYKGYLTEEAGPLFAGL-FYEKANKTIIEHLTEIGLLLKMKEITHSYPHDWRSKT 406

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 407 PVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440


>gi|344236435|gb|EGV92538.1| Isoleucyl-tRNA synthetase, mitochondrial [Cricetulus griseus]
          Length = 835

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 187/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 20  SAFARWGVMADWNNCYYTFDAKYEAKQLRLFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 79

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP  + L +   P +   +WTT PWT+PAN AV    +
Sbjct: 80  ELEYNPEHVSRSIYVRFPLLQPPPKLASLTDGSSP-VSFLIWTTQPWTIPANQAVCYMPE 138

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV+  S   GD    A  K  P             VAS L  T E        +  
Sbjct: 139 AKYAVVKCSS--SGDIYILAEDKISP-------------VASALETTFE--------VIS 175

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 176 TFSGVDLEGGTCSHPLIPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPM 235

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L     L+ EE   H YP DWRTKKP
Sbjct: 236 DCLVDEDGVFTDAAGPELENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKP 295

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF +++  +  A + +  VK++P
Sbjct: 296 VVIRASKQWFINIKDIKATAKELLKTVKFIP 326



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 168/350 (48%), Gaps = 34/350 (9%)

Query: 332 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-G 390
           P + P YGAD LR W++  +   +V IGP  L    D   KLR TLR+LLGN+  +    
Sbjct: 508 PSKEPPYGADALRWWIAESNVFTEVAIGPSALSAARDDISKLRNTLRFLLGNVAGFNPET 567

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +S+   D+ +IDQY L  +++    + +SY+ Y F K+ ++++ F   +LS+FYF + KD
Sbjct: 568 DSVPVKDMYVIDQYMLHLIQDFSTKVTDSYKQYDFGKVIRLLKAFYTRELSSFYFSIVKD 627

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY        RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    V
Sbjct: 628 RLYCESEKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP--YVKEPKS----V 681

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKI-LELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           F + W           +     W K  LE   E    +  +  G + G +          
Sbjct: 682 FRTGW-----------INTSSIWKKPGLEEAVESTCAMRDSFLGSIPGKNAAEYEVTIVI 730

Query: 570 DASLASRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGK 624
           +  L   + EM  A+  + T  L  + + SQ  +L   P     + I  +G +L+  EG 
Sbjct: 731 EPGLLFEIMEMLQAEEISSTSQLNELMMASQTTLLTQEPRERAEDGIELTGSFLINLEGG 790

Query: 625 D-----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           D        + V  A   KC RCW ++ +        TLC RC EV+  +
Sbjct: 791 DIREESSYKVIVVPAAREKCPRCWKHTAETAD-----TLCPRCAEVIGAK 835


>gi|302666831|ref|XP_003025011.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
 gi|291189091|gb|EFE44400.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
          Length = 1012

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 196/344 (56%), Gaps = 40/344 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 149 MEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLAVWTTTPWTVPANAAVA 117
           AELEY E H+S +    F + + P   S +L   L    D+   +WT TPWT+PANAA+A
Sbjct: 209 AELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGNDISAVIWTMTPWTLPANAALA 265

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           VN   +Y +V+                +R G +L  Q ++       L   LE  +    
Sbjct: 266 VNPDFEYTIVD---------------STRHGKLLVAQSRL-----QYLQELLEEDF---T 302

Query: 178 VIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           VI   + GS+L N  Y      P   +Q   +I  +++T ++G+G+VH APGHG EDY  
Sbjct: 303 VIIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAAEFVTADAGSGIVHCAPGHGMEDYEA 360

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
            L  G+P  +PVD EG+FT+ A        +G +VLGDGN AV+K+L E   LI +  Y+
Sbjct: 361 CLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNHAVIKHLSETGILIHKHDYK 420

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 421 HKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 464



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 169/339 (49%), Gaps = 30/339 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
             +RR+ QT L      I  ++ PI+P L E+ W++ P           +  F+  +   
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTPGNIK----RCLKHPFQRTFKSP 853

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLASRL 577
           D +W+   +   Y    ++   + +  + E AR+ K +GSSL++ V+L   +   ++ +L
Sbjct: 854 DSQWKNDILEHEY--SAMVAANSAIKAMQETARSKKQMGSSLQSFVHLVLPEGFEISEQL 911

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-----PYSGEYLVEGKD--KVWIG 630
           +           L   F++S V + P   + ++ +I      YS E+ +      K W  
Sbjct: 912 QT---------ELPDFFVVSSVTIGPEC-DSVLNDITQAEWSYSSEFKLPNDQIGKAW-- 959

Query: 631 VSRAEGSKCERCWNYS---TQVGSFVEHPTLCSRCYEVL 666
           V     +KC RCW Y+   T+ GS  E   LC RC EV+
Sbjct: 960 VYTPTQAKCPRCWRYAVQPTETGSKDEE-DLCHRCEEVV 997


>gi|406983150|gb|EKE04397.1| hypothetical protein ACD_20C00084G0017 [uncultured bacterium]
          Length = 945

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 191/334 (57%), Gaps = 31/334 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           +FKR GVW +W +PY+T+ P++EA Q+ +FG++  +GY+Y+G KPV+W     TALAEAE
Sbjct: 146 NFKRLGVWGNWEHPYVTISPDFEAEQVRIFGEIHKKGYVYKGLKPVYWCADCETALAEAE 205

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVWTTTPWTVPANAAVAVNA 120
           +EY + H S S+Y  F   +     +    E   D  L + +WTTTPWT+PAN A+ ++ 
Sbjct: 206 VEYAD-HKSHSVYVKFTFENEEAKKAYQTAELNIDNPLSMVIWTTTPWTLPANLAICLHP 264

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTK-L 177
           +LQYA V+                       K+ ++   I+A DL+ +      W     
Sbjct: 265 RLQYAFVQ-----------------------KEGEQEVYIIAVDLMESFATNVSWEENGF 301

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I  T  G   E     HP+ +R   ++I G+++TTE+GTG VHTAPGHG EDY    +Y
Sbjct: 302 KILGTSTGDKFEYLNAKHPLFDRN-SLIILGEHVTTEAGTGAVHTAPGHGLEDYEVGTRY 360

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            + +LSP+ ++G FTE+AG+F G+      N  +V+ L ++ +L+      H YP+ WR 
Sbjct: 361 RIGVLSPLTNKGIFTEDAGQFQGMR-YDKANEVIVQELRDKNALLGYGEILHSYPHCWRC 419

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           K P I+RATEQWF  V  FR  A+ AI  VKW+P
Sbjct: 420 KHPVIYRATEQWFIDVNAFRADALKAINDVKWIP 453



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/357 (37%), Positives = 197/357 (55%), Gaps = 25/357 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           ++G  +    ++G V  V PQ     YGADVLRLW +SVDYT DV I   +++Q+ ++YR
Sbjct: 611 LDGSGRKMSKSLGNV--VEPQTIINKYGADVLRLWTASVDYTNDVRISENIIQQLVEVYR 668

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R+LLGNL+D+    N + Y +L  ID+YAL +L+ +V+++  +++ Y+F++ +Q
Sbjct: 669 KVRNTSRFLLGNLYDFDPAANCVEYANLSDIDKYALHKLQKLVESVSTAFDKYEFYRYYQ 728

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
           +IQ F   D S+FY D+ KDRLYT G  S  RRS QTVL   L  + R++ P+ PHLAED
Sbjct: 729 LIQNF-TSDFSSFYLDIVKDRLYTAGKDSLARRSSQTVLFETLHVLARLLVPVTPHLAED 787

Query: 491 VWQNLPFAYTL-EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           VW      Y L       E +  S WP +  ++    V +   W  I ELR  V K +E 
Sbjct: 788 VW-----LYVLPSQKGNIESILLSDWPRVKPEYLNNEVNDK--WNAIAELREIVTKAIEP 840

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
            R  K +GSSLE  V +   +      + +    +     L  +FI SQ  +L +  N +
Sbjct: 841 VRAEKKVGSSLETAVAIRVINKPDVEEMLKTVQGE-----LANVFITSQAVILKN--NEV 893

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             NI    E     +D   + V+ A G KC+RCW +S  VG+  EH TLC  C + +
Sbjct: 894 PENILNQYE-----EDSYHVYVTHAMGEKCDRCWKFSDTVGTEKEHETLCLDCIKAI 945


>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 928

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 188/329 (57%), Gaps = 34/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R G+  DWNNPY+TL+ E+EA ++ VF  +   GY+Y+G KPV+WSP++ TALAEAE+
Sbjct: 144 FIRLGILGDWNNPYITLNKEFEAEELRVFRDIYENGYVYKGLKPVYWSPTTETALAEAEI 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY    +        G+ N       + +WTTTPWT+PAN A+++N    
Sbjct: 204 EYKDVE-SDSIYVKMNLTDETNEKLGVEN-----AAVIIWTTTPWTIPANLAISLNENFV 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y V                 K+  GN         +I++  L      +      + K +
Sbjct: 258 YGVY----------------KTEKGN---------LILSKSLAEKAFNEMNLSFELIKEI 292

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G D E   Y HP+ +R   ++I GD++T ++GTG VHTAPGHG +DY  SLKYG+ ILS
Sbjct: 293 QGKDFERLTYKHPIYDR-VSMLILGDHVTEDAGTGCVHTAPGHGVDDYNVSLKYGIGILS 351

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G  T EA ++ GL      N A++  L+    L+  +   H YP+DWR+KKP IF
Sbjct: 352 PVDDKGHMTSEAPRYEGL-FYKKANSAIMADLENSGHLLGHKKLVHSYPHDWRSKKPVIF 410

Query: 304 RATEQWFASVEG-FRQAAMDAIGQVKWVP 331
           RATEQWF  V+G  R+  ++ + +V++VP
Sbjct: 411 RATEQWFIKVDGEVRENTLEKLEEVEFVP 439



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 188/335 (56%), Gaps = 34/335 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           +GAD+LRLWVSSVDY  DV I   +++QM+D YRK+R T RYLLGN++D+   N ++YDD
Sbjct: 620 HGADILRLWVSSVDYREDVRISDNIIQQMTDSYRKIRNTARYLLGNINDFDRSNKVAYDD 679

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  ID++A+ +LE + + + + YE+Y+F+ +FQ I  F  V++S+FY D+ KDRLY    
Sbjct: 680 MLEIDKWAMHKLEELKEKVTKHYENYEFYSLFQEILYFCSVEMSSFYLDIIKDRLYCEYK 739

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF---ESK 514
            S  RRS Q+VL   L  +VR+I+P+L   AE++W+ L +    E    A ++    E  
Sbjct: 740 DSLERRSAQSVLVDILDVLVRIISPVLSFTAEEIWERLDYEGKEESVHLASWIKAKPEHM 799

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDASL 573
              L +KW+              ELR EVNK +E  R    IG SL+A+V +  T+D   
Sbjct: 800 NEELAKKWQILG-----------ELRKEVNKKIEKERQNGSIGLSLDARVLIKVTNDKY- 847

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
                E      + D +  IF++SQVE           N        +EG +   + + R
Sbjct: 848 -----EFIKEYSNWD-ISDIFLVSQVE---------FTNTEELESTDLEGFE---VKIVR 889

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           A G KCERCW YS +VG  +E+P +  R  +VL +
Sbjct: 890 ALGKKCERCWKYSEEVGQDLEYPDVTLRDAKVLKM 924


>gi|347727088|gb|AEP19902.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. N39]
          Length = 908

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 193/330 (58%), Gaps = 39/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 139 FKRLGLLADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGKKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F++V          + F+      +WTTTPWT+PAN  +AV+ +L 
Sbjct: 199 EYYDKK-SPAIYVAFQVVDG-KDVLQTTDHFV------IWTTTPWTIPANLGIAVSDELT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVP--TLEAKWGTKLVIKK 181
           Y  +E                        D K    IVA  LV   T   KW T   +  
Sbjct: 251 YTRIE-----------------------HDGKG--YIVAESLVEEVTTALKW-TDYTVSG 284

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           +  G + E     HP+ +R   V+I GD++T ++ TGLVHTAPGHG++DY     YGL +
Sbjct: 285 SWNGREFEYMTAQHPLYDRTSLVMI-GDHVTADA-TGLVHTAPGHGEDDYRVGQAYGLDV 342

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD G  T+EA  F GL    D N  +   L+E   L+  +  +H YP+DWRTKKP 
Sbjct: 343 LCPVDDRGYMTDEAPGFEGL-FYEDANKQIGMKLEENGYLLNLKFIKHSYPHDWRTKKPV 401

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS++ FR   +  I +V WVP
Sbjct: 402 IFRATPQWFASIKDFRADMLREIEEVNWVP 431



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 182/333 (54%), Gaps = 37/333 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQSDVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQAKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-- 515
               RR+ QTV+   ++++ +++APILPH A++VWQ +P          A+ VF +    
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP-------AKQADSVFLTDLDE 782

Query: 516 -PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
              L E  +      +  W K L  R +V K +E+AR  KLIG  LEAK+        L 
Sbjct: 783 VAALSEDEKAL----LAKWSKFLTFRDDVLKAIEIARGEKLIGKPLEAKL--------LV 830

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           +   E        D ++++  +SQ++ + S       ++ Y+            I V +A
Sbjct: 831 APKGETKQLLETIDNVRQLLQVSQLDYVDSA------DVDYA---------TAEISVLKA 875

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +G+ C RCW YST++G   +HP LC RC EV+A
Sbjct: 876 DGAACARCWTYSTELGQDEQHPELCPRCTEVIA 908


>gi|433448685|ref|ZP_20411551.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
 gi|429539612|gb|ELA07648.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
          Length = 930

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 196/330 (59%), Gaps = 33/330 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G+ ADW+NPYLT D E+EAA++ VFG+M  +  IYRGKKPV WS SS +ALA AE
Sbjct: 138 DFKRLGISADWDNPYLTKDQEFEAAEVRVFGKMVARDLIYRGKKPVLWSWSSESALAMAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +   S S+    R+V       G+L+    D    VWTTTPWT+PA+ A+AVN   
Sbjct: 198 IEYHDV-TSTSVSFSERVVDG----KGVLDN---DTYFVVWTTTPWTIPASQAIAVNPNF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y VV+           PAN            KK  +  A       +  W    +I KT
Sbjct: 250 EYVVVK-----------PANS----------DKKFVVANARLATAAADFGWEEYEII-KT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GSD++     HP  +R+  +VI GD++T E+GTGLVHTAPG G++D+  + KY LP++
Sbjct: 288 VKGSDIDRVTAQHPYLDREV-LVINGDHVTDEAGTGLVHTAPGFGEDDFYAAQKYDLPVI 346

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             VD +GK T+E G+ F+G+    D N   ++ L E  +L+  +   H YP+DWRTKKP 
Sbjct: 347 MNVDGQGKLTDETGEDFAGV-FYEDANEISLQKLTENDALVKAQEITHSYPFDWRTKKPV 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           I+RA  QWFAS+E FRQ  +D++  V++ P
Sbjct: 406 IYRAVPQWFASIEPFRQEILDSLDDVEFQP 435



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 199/392 (50%), Gaps = 46/392 (11%)

Query: 280 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYG 339
           SLI      HK PY          R   Q FA ++G       +IG    VP +     G
Sbjct: 567 SLITSVAVNHKAPYK---------RVISQGFA-LDGNGDKMSKSIGNT-IVPEEIVKDMG 615

Query: 340 ADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDL 398
           A+++RLWV+SVD + DV +  ++L + SD YRK+R T+R+LL N+ D+    +++++ D+
Sbjct: 616 AEIIRLWVTSVDSSADVRVSKEILAKTSDTYRKIRNTMRFLLSNVDDFNPETDAVAFADM 675

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQY   +    V++++ +Y++Y F  I ++I  FI VDLS FY D AKD LY     
Sbjct: 676 TPVDQYFYARFNEFVRDVKAAYDAYDFQAINKLIINFINVDLSAFYLDFAKDILYVEAPK 735

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
              RRS QTVL   L+ + +++ PILPH AE++++ +PF         AEF + ++   +
Sbjct: 736 GELRRSLQTVLYKILVDMNKMLLPILPHTAEEIFEYMPF-------ETAEFAYLTEMAEV 788

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA--KVYLFTDDASLASR 576
           ++   T  +  I  W + + LR   NK LEVAR  KLIG   EA   VYL  + A L S 
Sbjct: 789 EDLGDTTTL--IANWQQFMTLRDAANKALEVARDAKLIGKPAEAALTVYLTAEQAELLSA 846

Query: 577 LREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           L +          ++ + ++SQ+ +  +   P     + P   EY         I V+ A
Sbjct: 847 LGQ---------DVRVLLLVSQLHLADIADAP----ADTPVFDEYT--------IAVAHA 885

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG    R   Y T +G+  + P L +   +++
Sbjct: 886 EGEVSPRDRMYHTDLGTDADFPMLSAHEAQIV 917


>gi|336323063|ref|YP_004603030.1| isoleucyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
 gi|336106644|gb|AEI14462.1| Isoleucyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
          Length = 933

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 193/331 (58%), Gaps = 25/331 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+T+D EYEA  +    +    G +Y+G KPVHW  S  TALAEAE+
Sbjct: 140 FKRLGVLGDWDNPYVTMDFEYEAVTLGELYKFFNNGGVYKGLKPVHWCTSCVTALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SI+  F + +      G+  E    + + +WTTTPWT+PAN AVA + +L+
Sbjct: 200 EYAQ-HTSDSIFVKFEVDAKTAEEFGIEGE---KISVIIWTTTPWTLPANLAVAFHPELE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK-KT 182
           Y+ V I+S             S  GN+   +    I+VA  LV  L  ++G     + KT
Sbjct: 256 YSFVRIKS-------------SENGNLKAGE---IIVVAKKLVEDLMQEFGVNDYEEIKT 299

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G D EN    HP  +R+  ++I G+++TTE G+G+VHTAPGHGQEDY    +YGL +L
Sbjct: 300 AFGIDFENKYAHHPFYDRK-SLMILGEHVTTEQGSGIVHTAPGHGQEDYEVGREYGLEVL 358

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G F      F G ++    N  +V+++ E  SLI     EH YP+ WR KKP +
Sbjct: 359 NPVDDYGIFKGSLPVFGGKNIF-KANPEIVEHMRENGSLIKSSKVEHSYPHCWRCKKPVV 417

Query: 303 FRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           FRAT QWF S+E    R+ A+  I +VKW+P
Sbjct: 418 FRATPQWFISMENNDLRKNALSEIKKVKWIP 448



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 193/354 (54%), Gaps = 33/354 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    ++G V   P +    YGA++LRLWVS+ DY+ DV I   +++++ + YRK
Sbjct: 604 VDGEGRKMSKSVGNV-ITPDEIVNKYGAEILRLWVSAEDYSEDVRISADIIKRLVESYRK 662

Query: 373 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R T RYLLGNL D++   + +SYD L  +D+Y L + E     I  +++ YQF   +  
Sbjct: 663 IRNTSRYLLGNLSDFQPDEDMVSYDHLLDLDRYILIKWEKAKNRILTAFDKYQFHTFYHT 722

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
              F I  LS+FY D+ KDRLYT    S  R+S QTV+   +  +  +++PIL   A+++
Sbjct: 723 FINFCINTLSSFYLDILKDRLYTYKADSHYRKSAQTVVFTLMKEMCIIMSPILSFTADEI 782

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF---WGKILELRTEVNKVLE 548
           W+ LP     E  S +EFVFE  +P + E        E+     W KI  +R EVNK LE
Sbjct: 783 WEYLP-----EYESKSEFVFEEIFPKIQEH------NEVQLEEKWDKITAVRKEVNKALE 831

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
           +AR  KLIG  L+A+V L + +      L+++ TA    + + RIFIIS++         
Sbjct: 832 LARAEKLIGHPLDARVTLGSKE-----NLKDVLTAD---EGINRIFIISEL--------- 874

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           +I++     +        + I + +A   KCERCW  S  +G   EHP +CSRC
Sbjct: 875 IIKDYEEISDGFESENMPLKIFIEQAPYEKCERCWVRSDSIGEDEEHPGICSRC 928


>gi|240276584|gb|EER40095.1| isoleucyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325095370|gb|EGC48680.1| isoleucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 1020

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/343 (40%), Positives = 192/343 (55%), Gaps = 39/343 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F ++ V ADW N + T+D  +E  Q++VF +M  +G I+R  KPV+WSPSSRTALAE
Sbjct: 151 MKGFHKWAVMADWENAWKTMDKSFEKRQLDVFLKMVEKGLIHRRFKPVYWSPSSRTALAE 210

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H S +    F +VS P     +L     ++   +WTTTPWT+PANAA+AV+ 
Sbjct: 211 AELEYKEDHKSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAAIAVSP 270

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L+Y+VV                        K +K  +++V S     ++     + V  
Sbjct: 271 TLEYSVV------------------------KSEKHGYLVVGSSRREYVQTLLQGEEV-- 304

Query: 181 KTLAGSDLENCRYVH-----PV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
            T+ GS +  C  V      P+  D      VI  D++T +SG+GLVH APGHG EDY  
Sbjct: 305 -TVMGSPMLGCELVSESTYLPLFKDGSVPQPVIAADFVTADSGSGLVHCAPGHGMEDYEV 363

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
              +G+   +PVDD G FT+ A        SG  VLGDGN  V++Y++ +  L+ +  YE
Sbjct: 364 CQAHGIASHTPVDDAGLFTDAAMPLNPSMLSGKSVLGDGNREVLRYVESKGQLLAKHTYE 423

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++P
Sbjct: 424 HKYPYDWRSKLPVIVRATEQWFADVSDIRYYALQALEDVQFIP 466



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 168/341 (49%), Gaps = 25/341 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++I   VL+ +     K R T + LLG+L D+    ++ ++ L
Sbjct: 682  GTDALRLWVASSDYTKDIVISQPVLKTVHTNLHKYRVTFKLLLGSLQDFDPSCTVPHESL 741

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL  ++   +++Y S++F++    I ++  +D S FY +  KDRLY     
Sbjct: 742  RIIDKIALLQLRKLINICQDAYSSFEFYRAITAINKWANLDFSAFYIESLKDRLYADCPN 801

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            S +RR+ QT L         ++AP++P+L E+ W++ P     +       +     P  
Sbjct: 802  SLSRRAAQTTLCHIYYHFQNLLAPLVPNLVEESWEHTPELIKTKFDPPLHRIMAKPPP-- 859

Query: 519  DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
              +W+   + EI+    ++ + T V  + E AR  K +GSSL+  V++     S++    
Sbjct: 860  --EWQNDELEEIF--PLLMAINTAVKTMQENARNRKEMGSSLQTFVHI-----SVSCSAA 910

Query: 579  EMCTAKHDADTLQRIFIISQVEV------LPSTPNGLIRNIPYSGEYLVEG---KDKVWI 629
            E    +     LQ +F++S V V      LP  P        YS ++   G   +  VWI
Sbjct: 911  EASIFEKFGYELQDLFVVSSVTVGYNNAALP--PEIEAAEWKYSSDFEFPGGSARGHVWI 968

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
               +A   KC RCW Y+  +    + P LC RC +V+   P
Sbjct: 969  YTPQA--IKCGRCWRYAVPLEPKQDDP-LCQRCIDVVGELP 1006


>gi|255955271|ref|XP_002568388.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590099|emb|CAP96268.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 995

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 198/338 (58%), Gaps = 29/338 (8%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 147 MKGFRGFAVMADWENHWKTMDKQFEMRQLGIFREMVDRGLIYRKFKPVYWSPSSGTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E H S +    F +V  P     L N  L   DL   +WTTTPWT+PANAA+AV
Sbjct: 207 AELEYKEDHTSTAALVKFPLVDIPKYL--LENPLLRGKDLSAVIWTTTPWTLPANAAIAV 264

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +  L+Y +V   S   G      ++     N+LK+   V       +VP++    G++L 
Sbjct: 265 SESLEYTIV--LSEKHGHLLIAQSRFEYLQNMLKEDLSV-------IVPSI---LGSELA 312

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            K T         R +      Q   +   D++T +SG+G+VH APGHG +DY   L  G
Sbjct: 313 EKTTY--------RPLFKGPEAQPQPIFAADFVTADSGSGMVHCAPGHGMDDYEACLARG 364

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +P+ +PV+DEGKFT++A      + +G  VLG+GN AV+++++    L+ +  YEHKYPY
Sbjct: 365 IPVFAPVNDEGKFTDKAMPLDPTRLTGKPVLGEGNTAVLEWVESCDQLLAQHKYEHKYPY 424

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 425 DWRSKLPVIVRATEQWFADVADIRSSALRALEDVRFVP 462



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 15/329 (4%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y  L
Sbjct: 676 GPDALRMWAASSDYTRDVVIGRQVLQTVNTSLHKFRVTFKLLLGALADFHPENVVPYGQL 735

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
            ++D+ AL  L ++V   +++ ++++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 736 QLVDRIALKHLSDMVLTSQKACDNFEFYKGVSTMNRWANLEFSAFYMEAIKDRLYTLGED 795

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
           S +RR+ QT L      +   +API P L E+ W+  P +   +     + V  +  P  
Sbjct: 796 STSRRAAQTTLFYVYNHLQEALAPITPVLVEETWEYTPESIRTKSQHPLQRVISAPAP-- 853

Query: 519 DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
             +W+   +   Y   ++  + + +  + E AR+ K +GSSL++ V++      L    +
Sbjct: 854 --EWQDSALDTSY--QELTVVHSAIKNLQEQARSKKQLGSSLQSFVHIVVPSTGL---FQ 906

Query: 579 EMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE-GKDKVWIGVSRAEGS 637
           +  +   D   +  I + S  E LP+     I++  +  E   E G     + V   + S
Sbjct: 907 QYLSELPDLFVVSSITLSSHGEALPTE----IKDAEWQYEETFELGGQPGKVYVYAPQAS 962

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC RCW Y+      VE+ T+C RC  V+
Sbjct: 963 KCPRCWRYAIPEPVAVEN-TICDRCETVM 990


>gi|365873669|ref|ZP_09413202.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
 gi|363983756|gb|EHM09963.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
          Length = 928

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 189/330 (57%), Gaps = 32/330 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPYLTL PEYEAAQIE F  M  +G +Y+G+KPV W    +TALA AE+
Sbjct: 143 FKRLGVLGDWDNPYLTLRPEYEAAQIEAFADMVEKGLVYKGQKPVFWCTDCQTALAAAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S SIY  + M     S   +    + DL + +WTTTPWT+PA+ AVAV+ + Q
Sbjct: 203 EY-EDEASPSIYVAYPMRKLSESMGQMP---MDDLFVVIWTTTPWTLPASMAVAVHPQYQ 258

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIKKT 182
           Y V              A+  SR            +I+A +     EA+ G  L    + 
Sbjct: 259 YGVF------------CASNGSR------------LIMAVERKEAFEAESGISLGEAIRV 294

Query: 183 LAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             G+ LE     HP   +R  P+V+  DY+  +SGTG VHTAPGHG ED+ T ++YGL I
Sbjct: 295 FPGAGLEGAIAGHPFYADRDIPLVL-ADYVVLDSGTGCVHTAPGHGVEDFETGVRYGLEI 353

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+PVD++G F ++     G+ +  DG   V+  L E   L+     +H YP+ WR K+P 
Sbjct: 354 LNPVDNKGFFVKDTPLVGGMSI-SDGAKLVMSTLAESGRLLFSGKIKHSYPHCWRCKRPV 412

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFR+T+QWF SV+ FR+ AM AI  VKWVP
Sbjct: 413 IFRSTDQWFVSVQAFREDAMGAIESVKWVP 442



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 198/374 (52%), Gaps = 33/374 (8%)

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTG 354
           R K P  FR        V+G  +    ++G V    PQE    YGAD+LRLWV+S DY G
Sbjct: 583 RGKAP--FRQVLTHGFIVDGHGRKMSKSLGNV--TSPQEVIDKYGADILRLWVASTDYRG 638

Query: 355 DVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIV 413
           DV I  ++L+ + + YR++R T R++LGNL D+    + +S  DL   D++AL +L+++V
Sbjct: 639 DVRISDRILKNLVESYRRIRNTARFILGNLSDFDPSKHMVSRHDLMPFDKWALSRLQDLV 698

Query: 414 KNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHL 473
           + + + YE Y+F   +  + +F   D+S+ Y DV KDRLY       +RRS Q+ +   L
Sbjct: 699 EKVTKGYEEYEFHVPYFAVHQFCDNDMSSLYLDVCKDRLYADHCDGLSRRSAQSAMWEIL 758

Query: 474 LSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFW 533
           +S+ +++APIL    E++WQ   FA  + D S  E VF S WP +D         E+  W
Sbjct: 759 ISLTKILAPILSFTCEEIWQ---FARQM-DPSLEESVFLSAWPSVDRT--GLDDVEMKNW 812

Query: 534 GKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRI 593
            ++ E+R  V + LE AR   +IG+SLEA+V +  D A  A  L          + L+ +
Sbjct: 813 SRLFEVRGAVLRALEQARLNGMIGNSLEAQVEM--DLAGYADLLNYFSL-----EFLEDL 865

Query: 594 FIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFV 653
           F++S          GL+ +   S +  V+ +  V + VS +   KC RCW +  +V    
Sbjct: 866 FMVS----------GLVVSGAMSSDAHVDEETGVRLAVSHSPYQKCPRCWKWKQEVKDL- 914

Query: 654 EHPTLCSRCYEVLA 667
               +C RC EVL+
Sbjct: 915 ---GVCGRCGEVLS 925


>gi|38490690|ref|NP_941055.1| isoleucine--tRNA ligase, mitochondrial precursor [Mus musculus]
 gi|81896262|sp|Q8BIJ6.1|SYIM_MOUSE RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|26339478|dbj|BAC33410.1| unnamed protein product [Mus musculus]
 gi|30931090|gb|AAH52403.1| Isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1012

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP    L +   P + + VWTT PWT+PAN A+    +
Sbjct: 257 ELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVLVWTTQPWTIPANQAICYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  G++         I+A D +  + +   T   +  
Sbjct: 316 AKYAVV---------------KCSASGHLY--------ILAEDKIAPVASALETTFDVVA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 AFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT+ AG +     VL +G   V+K L    +++ EE   H YP DWRTK P
Sbjct: 413 DCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA +++  VK++P
Sbjct: 473 VLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 170/347 (48%), Gaps = 36/347 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689  PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809  ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIR-NIPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P      +I  +G +++  EG D    
Sbjct: 913  FEIMEMLQAEETSSTSQLNELMMASQTTLLAQEPRERTAGDIELTGTFVINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
               KV +  +  E  KC RCW ++++         LC RC EV+  +
Sbjct: 973  SSYKVIVVPTARE--KCPRCWKHTSETAD-----ALCPRCAEVIGAK 1012


>gi|26331214|dbj|BAC29337.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP    L +   P + + VWTT PWT+PAN A+    +
Sbjct: 257 ELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVLVWTTQPWTIPANQAICYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  G++         I+A D +  + +   T   +  
Sbjct: 316 AKYAVV---------------KCSASGHLY--------ILAEDKIAPVASALETTFDVVA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 AFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT+ AG +     VL +G   V+K L    +++ EE   H YP DWRTK P
Sbjct: 413 DCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA +++  VK++P
Sbjct: 473 VLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 170/347 (48%), Gaps = 36/347 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689  PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809  ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIR-NIPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P      +I  +G +++  EG D    
Sbjct: 913  FEIMEMLQAEETSSTSQLNELMMASQTTLLAQEPRERTAGDIELTGTFVINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
               KV +  +  E  KC RCW ++++         LC RC EV+  +
Sbjct: 973  SSYKVIVVPTARE--KCPRCWKHTSETAD-----ALCPRCAEVIGAK 1012


>gi|418069447|ref|ZP_12706725.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
 gi|357536916|gb|EHJ20944.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
          Length = 933

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRGKKPV WS SS +A+AEAE+
Sbjct: 139 FKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA    VS      G+L++   D    VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA           D +K   ++A+D +     ++G + V   KT
Sbjct: 251 YSVVK-----------PAG----------DDRK--FVIATDRLSYATEQFGWQDVETIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL I 
Sbjct: 288 VRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKKP 
Sbjct: 348 VPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 407 IFRATPQWFASVDKIRDQILDALKDVKFLP 436



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 181/338 (53%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 667 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L            E
Sbjct: 727 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL--------SEPEE 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           FV  ++ P + E   +     +  W  + +LRT V K LE AR  K+IG S+EAK  L+ 
Sbjct: 779 FVQLAEMPEVQE--LSGAADLLAKWQTVKKLRTHVLKALEEARDQKMIGKSMEAKATLYL 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           D+A+      +    + + D L+ I I+SQ+EV         R++  + E       +V 
Sbjct: 837 DEAT------KQVVDELNVD-LRLILIVSQLEV---------RDLAEAPEDAASFDGQVA 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + ++ AEG  CERC    T VGS    PTLC+ C  ++
Sbjct: 881 VQITPAEGEVCERCRMTKTDVGSDEHFPTLCASCAAIV 918


>gi|374301254|ref|YP_005052893.1| isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554190|gb|EGJ51234.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 939

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 194/336 (57%), Gaps = 41/336 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+  W+NPYLT+ P YEAA     G+    G +YRGKKP+HW     TALAEAE+
Sbjct: 142 FKRLGVFGTWSNPYLTMLPTYEAATARELGRFMANGSVYRGKKPIHWCICCETALAEAEV 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG----LAVWTTTPWTVPANAAVAVN 119
           EY + H S SIY  F     P   +    +F    G    L +WTTTPWT+P+N AVAV+
Sbjct: 202 EYAD-HASPSIYVRF-----PVDDAAFSQKFSVASGKKAYLVIWTTTPWTIPSNMAVAVH 255

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV- 178
            + +Y +  +Q  +                          +VAS+ +  L+ K+  + V 
Sbjct: 256 PEYEYVLALVQGEVH-------------------------VVASERLTALQKKFKWQDVE 290

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           +   + G DLE  +  HP  +R  PVV+  DY+T ++GTGLVHTAPGHG+EDY T L+YG
Sbjct: 291 VLAVVTGKDLEGIKARHPFIDRVSPVVL-ADYVTLDTGTGLVHTAPGHGREDYETGLRYG 349

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +LSP+DD+G+F     + +G  V+ + N  V++ L E+ +L+ EE   H YP+ WR K
Sbjct: 350 LEVLSPLDDKGRFLPVVNELAGKTVI-EANPEVIRILRERGALLAEEKLSHSYPHCWRCK 408

Query: 299 KPTIFRATEQWFASVE--GFRQAAMDAIGQ-VKWVP 331
           +P IFRAT QWF S+E    R  A+ AI + V+W+P
Sbjct: 409 QPVIFRATTQWFISMEKNDLRAKALRAIEKDVRWIP 444



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 23/355 (6%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  V PQE    YGA+VLRLWVS+V+Y  DV I  ++L ++ D YR
Sbjct: 602 VDGEGRKMSKSLGNV--VAPQEIIDKYGAEVLRLWVSAVNYQEDVRISSEILDRLVDAYR 659

Query: 372 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           ++R T R++LGNL D+    ++ + ++  +D+YAL       + +RE+Y+ ++F K+F  
Sbjct: 660 RIRNTCRFILGNLSDFSPDKAVPFAEMGPVDRYALDLFRLNFEKVREAYQDFEFHKVFHT 719

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +    + DLS FY DV KDRLY  G  S  RR+ QTV+   LL++++ +APIL   AE+V
Sbjct: 720 LHNLCVTDLSAFYLDVIKDRLYVSGKDSKERRAAQTVIWKTLLTLMQEMAPILCFTAEEV 779

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           +++LP           + VFES++    E+       E      +  LR EVNK  E  R
Sbjct: 780 FRSLPEVLR----PKGQTVFESRFTFDTEE--RLDAEERANLKLLPVLRAEVNKAAEPIR 833

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
               IG SL+  V ++  D+ LA         K     L+ +FI+S+V +  +       
Sbjct: 834 KSGTIGHSLDTHVTIYAPDSLLAD-------LKVIGADLRELFIVSKVSLAAAEHAPADA 886

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                 E L        I V +A G KCERCW Y  + G   + P  C RC  +L
Sbjct: 887 YRSVETEGLA-------IKVEKASGVKCERCWVYDERTGEAGDFPGTCPRCARIL 934


>gi|26341092|dbj|BAC34208.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP    L +   P + + VWTT PWT+PAN A+    +
Sbjct: 257 ELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVLVWTTQPWTIPANQAICYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  G++         I+A D +  + +   T   +  
Sbjct: 316 AKYAVV---------------KCSASGHLY--------ILAEDKIAPVASALETTFDVVA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 AFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT+ AG +     VL +G   V+K L    +++ EE   H YP DWRTK P
Sbjct: 413 DCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA +++  VK++P
Sbjct: 473 VLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 170/347 (48%), Gaps = 36/347 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGAD+LR W++  +   ++ IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689  PPYGADILRWWIAESNVFTEMTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809  ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIR-NIPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P      +I  +G +++  EG D    
Sbjct: 913  FEIMEMLQAEETSSTSQLNELMMASQTTLLAQEPRERTAGDIELTGTFVINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
               KV +  +  E  KC RCW ++++         LC RC EV+  +
Sbjct: 973  SSYKVIVVPTARE--KCPRCWKHTSETAD-----ALCPRCAEVIGAK 1012


>gi|227524054|ref|ZP_03954103.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088793|gb|EEI24105.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 942

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 197/333 (59%), Gaps = 33/333 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+GKKPV+WS SS +ALAE
Sbjct: 143 MDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAE 202

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +     + Y             G+L E   +  + VWTTTPWT+PA+  + V+A
Sbjct: 203 AEVEYHDVTSPSAFYG-----EKVTDGKGVLEE--DNTFMVVWTTTPWTIPASEGITVDA 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
              YAVV+ +                      D++K   ++AS+L+   E+ +G K V I
Sbjct: 256 DFDYAVVQPED---------------------DERK--FVIASELLEKDESLFGWKNVKI 292

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTAPG+G++D+    KYGL
Sbjct: 293 VKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTAPGYGEDDFNIGRKYGL 352

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
            I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+   P  H YP+DWRTK
Sbjct: 353 DIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLLDYMPLNHSYPFDWRTK 411

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 412 KPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 167/331 (50%), Gaps = 30/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYTLEDGSAAEFVFESKW 515
               RRS QTV+   + ++ +++ P+LPH AE++W  L  P  +        +  F+++ 
Sbjct: 744 DGHKRRSMQTVMYHTVTTLTKLMTPVLPHTAEEIWGFLKEPEDFVQLTDIPKQQHFDNEA 803

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +L+E            W K +  R +V KVLE AR  K IG + EA + ++    +   
Sbjct: 804 DILEE------------WTKFMTYRDDVLKVLEEARDAKEIGKASEASLTIYA--TTEVK 849

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E          L  + ++SQ+ V   T      + P +        D + + V  A+
Sbjct: 850 DLFESLNVD-----LATVLLVSQLTVKDFT------DAPDNATKF--DSDGLALLVEPAK 896

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G  CERC    T VGS  ++PT C  C E++
Sbjct: 897 GKTCERCRLVRTDVGSDSDYPTFCHSCAEIV 927


>gi|427439868|ref|ZP_18924432.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
 gi|425788000|dbj|GAC45220.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
          Length = 936

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRGKKPV WS SS +A+AEAE+
Sbjct: 142 FKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEV 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA    VS      G+L++   D    VWTTTPWT+PA+  + ++A   
Sbjct: 202 EYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFD 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA           D +K   ++A+D +     ++G + V   KT
Sbjct: 254 YSVVK-----------PAG----------DDRK--FVIATDRLSYAAEQFGWQDVETIKT 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL I 
Sbjct: 291 VRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIF 350

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKKP 
Sbjct: 351 VPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPI 409

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 410 IFRATPQWFASVDKIRDQILDALKDVKFLP 439



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 610 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 669

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 670 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 729

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L            E
Sbjct: 730 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL--------SEPEE 781

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           FV  ++ P + E   +     +  W  + +LR+ V K LE AR  K+IG S+EAK  L+ 
Sbjct: 782 FVQLAEMPEVQE--LSGAADLLAKWQTVKKLRSHVLKALEEARDQKMIGKSMEAKATLYL 839

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           D+A+      +    + + D L+ I I+SQ+EV         R++  + +       +V 
Sbjct: 840 DEAT------KQVVDELNVD-LRLILIVSQLEV---------RDLAEAPDDAASFDGQVA 883

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + ++ A+G  CERC    T VGS    PTLC+ C  ++
Sbjct: 884 VQITPADGEVCERCRMTKTDVGSDEHFPTLCASCAAIV 921


>gi|227512214|ref|ZP_03942263.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084608|gb|EEI19920.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 942

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 200/333 (60%), Gaps = 33/333 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+GKKPV+WS SS +ALAE
Sbjct: 143 MDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAE 202

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +     + Y   +++       G+L E   +  + VWTTTPWT+PA+  + V+A
Sbjct: 203 AEVEYHDVTSPSAFYGE-KVIDG----KGVLEE--DNTFMVVWTTTPWTIPASEGITVDA 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
              YAVV+ +                      D++K   ++AS+L+   E+ +G K V I
Sbjct: 256 DFDYAVVQPED---------------------DERK--FVIASELLEKDESLFGWKNVKI 292

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTAPG+G++D+    KYGL
Sbjct: 293 VKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTAPGYGEDDFNIGRKYGL 352

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
            I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+   P  H YP+DWRTK
Sbjct: 353 DIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLLDYMPLNHSYPFDWRTK 411

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 412 KPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 167/331 (50%), Gaps = 30/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYTLEDGSAAEFVFESKW 515
               RRS QTV+   + ++ +++ P+LPH AE++W  L  P  +        +  F+++ 
Sbjct: 744 DGHKRRSMQTVMYHTVTTLTKLMTPVLPHTAEEIWGFLKEPEDFVQLTDIPKQQHFDNEA 803

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +L+E            W K +  R +V KVLE AR  K IG + EA + ++    +   
Sbjct: 804 DILEE------------WTKFMTYRDDVLKVLEEARDAKEIGKASEASLTIYA--TTEVK 849

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E          L  + ++SQ+ V   T      + P +        D + + V  A+
Sbjct: 850 DLFESLNVD-----LATVLLVSQLTVKDFT------DAPDNATKF--DSDGLALLVEPAK 896

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G  CERC    T VGS  ++PT C  C E++
Sbjct: 897 GKTCERCRLVRTDVGSDSDYPTFCHSCAEIV 927


>gi|270291450|ref|ZP_06197672.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280296|gb|EFA26132.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 933

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRGKKPV WS SS +A+AEAE+
Sbjct: 139 FKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA    VS      G+L++   D    VWTTTPWT+PA+  + ++A   
Sbjct: 199 EYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA           D +K   ++A+D +     ++G + V   KT
Sbjct: 251 YSVVK-----------PAG----------DDRK--FVIATDRLSYATEQFGWQDVETIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL I 
Sbjct: 288 VRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDIF 347

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKKP 
Sbjct: 348 VPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 407 IFRATPQWFASVDKIRDQILDALKDVKFLP 436



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 181/340 (53%), Gaps = 31/340 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 667 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L            E
Sbjct: 727 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL--------SEPEE 778

Query: 509 FVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           FV  ++ P + E     P     +  W  + +LR+ V K LE AR  K+IG S+EAK  L
Sbjct: 779 FVQLAEMPEVQE----LPGAADLLAKWQTVKKLRSHVLKALEEARDQKMIGKSMEAKATL 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           + D+A+      +    + + D L+ I I+SQ+EV         R++  + E       +
Sbjct: 835 YLDEAT------KQVVDELNVD-LRLILIVSQLEV---------RDLAEAPEDAASFDGQ 878

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V + ++ AEG  CERC    T VGS    PTLC+ C  ++
Sbjct: 879 VAVQITPAEGEVCERCRMTKTDVGSDEHFPTLCASCAAIV 918


>gi|354465154|ref|XP_003495045.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Cricetulus griseus]
          Length = 1136

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 186/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 321 SAFARWGVMADWNNCYYTFDAKYEAKQLRLFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 380

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP  + L +   P +   +WTT PWT+PAN AV    +
Sbjct: 381 ELEYNPEHVSRSIYVRFPLLQPPPKLASLTDGSSP-VSFLIWTTQPWTIPANQAVCYMPE 439

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV+  S   GD                       I+A D +  + +   T   +  
Sbjct: 440 AKYAVVKCSS--SGD---------------------IYILAEDKISPVASALETTFEVIS 476

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 477 TFSGVDLEGGTCSHPLIPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPM 536

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L     L+ EE   H YP DWRTKKP
Sbjct: 537 DCLVDEDGVFTDAAGPELENKAVLEEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKP 596

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF +++  +  A + +  VK++P
Sbjct: 597 VVIRASKQWFINIKDIKATAKELLKTVKFIP 627



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 32/349 (9%)

Query: 332  PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-G 390
            P + P YGAD LR W++  +   +V IGP  L    D   KLR TLR+LLGN+  +    
Sbjct: 809  PSKEPPYGADALRWWIAESNVFTEVAIGPSALSAARDDISKLRNTLRFLLGNVAGFNPET 868

Query: 391  NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            +S+   D+ +IDQY L  +++    + +SY+ Y F K+ ++++ F   +LS+FYF + KD
Sbjct: 869  DSVPVKDMYVIDQYMLHLIQDFSTKVTDSYKQYDFGKVIRLLKAFYTRELSSFYFSIVKD 928

Query: 451  RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            RLY        RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    V
Sbjct: 929  RLYCESEKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP--YVKEPKS----V 982

Query: 511  FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
            F + W      W+             LE   E    +  +  G + G +          +
Sbjct: 983  FRTGWINTSSIWKK----------PGLEEAVESTCAMRDSFLGSIPGKNAAEYEVTIVIE 1032

Query: 571  ASLASRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD 625
              L   + EM  A+  + T  L  + + SQ  +L   P     + I  +G +L+  EG D
Sbjct: 1033 PGLLFEIMEMLQAEEISSTSQLNELMMASQTTLLTQEPRERAEDGIELTGSFLINLEGGD 1092

Query: 626  -----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
                    + V  A   KC RCW ++ +        TLC RC EV+  +
Sbjct: 1093 IREESSYKVIVVPAAREKCPRCWKHTAETAD-----TLCPRCAEVIGAK 1136


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 187/336 (55%), Gaps = 37/336 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK  GV  DW +PYLT  P YEA  IEVF ++   GY+YR +KP+HW     TALAEAEL
Sbjct: 140 FKALGVLGDWEHPYLTFTPAYEAGVIEVFAKLVENGYVYRSRKPIHWCTRCATALAEAEL 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVAV 118
           EY +   S S+Y  F++          L  F PD G     L +WTTTPWT+PAN A+A+
Sbjct: 200 EYHDK-TSPSVYVHFKI-------KDTLKNFFPDDGNEGVSLMIWTTTPWTLPANLAIAL 251

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +    Y  +               +   P    K  KK   ++A   +  +    G K  
Sbjct: 252 HPGYDYTAI---------------RYFHP----KTNKKEVSLLADGRIDEVLQSLGIKDF 292

Query: 179 IK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            K  T+ G +LE  +Y H   +R   VV+  DY+T   GTG VH APGHGQED++T +KY
Sbjct: 293 KKLGTVKGIELEGVKYQHAFMDRTGFVVMA-DYVTLSDGTGCVHIAPGHGQEDFITGIKY 351

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            LP+LSPV+ EG FT EAG+F+G +++ +GN +++  LD   +L+ +    H YP+ WR 
Sbjct: 352 HLPVLSPVNAEGVFTGEAGEFAGQNII-EGNTSIINKLDAVGALLQKTNITHSYPHCWRC 410

Query: 298 KKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           K P IFRATEQWF +++    R   +  I  VKW+P
Sbjct: 411 KNPVIFRATEQWFVNLDHNNLRSTVLKEIKNVKWIP 446



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 192/331 (58%), Gaps = 22/331 (6%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           +GAD+LRLW SS+DY  D+ +   ++ + SD YR++R T RYLL NL+D+    N+I +D
Sbjct: 626 FGADILRLWTSSMDYQHDMGVSRNLINRCSDAYRRIRNTFRYLLSNLYDFNPHENAIPHD 685

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  ID++A+ + + ++K I  +YE+ QF K+F  I  F  V++S+FY D+ KDRLYT  
Sbjct: 686 ALLEIDRWAIHKTQELIKQITVNYETLQFHKVFHSIHNFCAVEMSSFYLDILKDRLYTFA 745

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QT L   LL++V++ API+ H AE+VW N+ F    ED  +      + +P
Sbjct: 746 KDSRERRAAQTALHTILLTLVKLSAPIIVHTAEEVWSNIEFKD--EDLWSIHL---TTFP 800

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             +  W    + +   W  ++ +RT+V K LE  R  K IG+SLEA V LFT++      
Sbjct: 801 KCNPAWTDASLNQN--WENLINIRTDVAKELEKMRAAKAIGNSLEASVSLFTENED---- 854

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
            R     K++ D L  +FI+S+V+V     NG+ +N    GE   +    +WI    ++ 
Sbjct: 855 -RYKFLIKYEND-LPALFIVSEVKV---RRNGIGKN-AVKGELTQD----IWIECGVSQH 904

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            KCERCWNY   VG+  E  TLC RC +VL 
Sbjct: 905 KKCERCWNYRESVGTVEEFQTLCGRCADVLT 935


>gi|74184865|dbj|BAE39055.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP    L +   P + + VWTT PWT+PAN A+    +
Sbjct: 257 ELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVLVWTTQPWTIPANQAICYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  G++         I+A D +  + +   T   +  
Sbjct: 316 AKYAVV---------------KCSASGHLY--------ILAEDKIAPVASALETTFDVVA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 AFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT+ AG +     VL +G   V+K L    +++ EE   H YP DWRTK P
Sbjct: 413 DCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA +++  VK++P
Sbjct: 473 VLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 36/347 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689  PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749  VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRS QT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809  ENEKDPKRRSYQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIR-NIPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P      +I  +G +++  EG D    
Sbjct: 913  FEIMEMLQAEETSSTSQLNELMMASQTTLLAQEPRERTAGDIELTGTFVINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
               KV +  +  E  KC RCW ++++         LC RC EV+  +
Sbjct: 973  SSYKVIVVPTARE--KCPRCWKHTSETAD-----ALCPRCAEVIGAK 1012


>gi|365925130|ref|ZP_09447893.1| isoleucyl-tRNA synthetase [Lactobacillus mali KCTC 3596 = DSM
           20444]
 gi|420266445|ref|ZP_14768911.1| isoleucyl-tRNA ligase [Lactobacillus mali KCTC 3596 = DSM 20444]
 gi|394425359|gb|EJE98343.1| isoleucyl-tRNA ligase [Lactobacillus mali KCTC 3596 = DSM 20444]
          Length = 932

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/330 (42%), Positives = 192/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPY+TLDP +EA ++ VFG+M+ +G IY+GKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDNPYVTLDPTFEAQEVRVFGKMAERGLIYKGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L+    D  + VWTTTPWT+P +  + V+    
Sbjct: 199 EYHDVTSPSAFYGEHVV-----DGKGVLDN---DTYMVVWTTTPWTIPGSEGITVDKDFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV+           PA           D++K   ++A+DLV     ++G  K    KT
Sbjct: 251 YSVVQ-----------PAG----------DERK--FVIATDLVEVNAERFGWEKFETLKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + GS+LE     HP +  +  V + GD++T +SGTGLVHTAPG G++D+   ++Y L I 
Sbjct: 288 VKGSELEYVLTEHPFNPERKLVTMIGDFVTLDSGTGLVHTAPGFGEDDFNVGMQYNLDIF 347

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD+G  T EAGK F G+    D N   +  L     L+   P EH YP+DWRTKKP 
Sbjct: 348 VPVDDKGYLTAEAGKDFEGV-FYEDANQISLDKLKAAGLLLKYMPLEHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +DAI  V++ P
Sbjct: 407 IFRATPQWFASVDKIRSEILDAIDDVQFFP 436



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 177/338 (52%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWV SVD + DV +     +Q+S+ YRK+R T+R+LL N  D+  
Sbjct: 607 VPEKVIKQMGAEIIRLWVLSVDTSADVRVSMDSFKQISESYRKIRNTVRFLLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++++DD+  +DQY   ++    K + ++Y +Y F  I++ +  F+ VDLS FY DVA
Sbjct: 667 AKNTVAFDDMEALDQYMEIRINKFTKEVLDAYATYSFMDIYKKLINFVTVDLSAFYLDVA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E++W  L            +
Sbjct: 727 KDVVYIESEDSRKRRSMQTVLYDVAVRLTKLLTPVLPHTTEEIWGYLK--------EPED 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           F   ++ P ++         + +     L++R+EV K LE AR  KLIG S EA+V L+ 
Sbjct: 779 FAQLAEMPAVNHYNNELETSKNF--ADFLDIRSEVFKALEKARNEKLIGKSFEAQVVLYA 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
            D ++   L ++ T       +++  I+S +EV        + + P   E      D++ 
Sbjct: 837 SD-NVIQLLEKLHT------DVRQALIVSALEVKS------LNDAPAEAERYT---DELS 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V  A+G  C RC      VGS  + PTLC+ C  ++
Sbjct: 881 IVVRHAKGEVCPRCRMIKEDVGSDNDFPTLCASCAAIV 918


>gi|319937141|ref|ZP_08011548.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807507|gb|EFW04100.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 910

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 194/332 (58%), Gaps = 37/332 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M    R G +AD+ +PYLTL PE+EA QI+VF +M+++G IY+G KPV+WSPSS +ALAE
Sbjct: 136 MEQCIRVGTFADYKHPYLTLMPEFEANQIDVFAKMAMEGLIYKGLKPVYWSPSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN A+ +NA
Sbjct: 196 AEVEYHDVK-SPTIFVKF----AVKDGKGILDN---DTSFVIWTTTPWTIPANLAICLNA 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG--TKLV 178
              YA+V+                          +K  +IV  +LV +L  K+G   K V
Sbjct: 248 DYTYALVQ-------------------------SEKGKLIVLDELVDSLWEKFGLEEKEV 282

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           +++   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAPG G +D+V   KYG
Sbjct: 283 LQR-FKGSELEMVTCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAPGFGMDDFVVGQKYG 340

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L I   VD  GK  E+ G++     + D N  V   LDE   L+  E   H YP+DWRTK
Sbjct: 341 LDIYCNVDAHGKMMEDCGEWLAGQYVDDANKTVTMKLDELGVLLKLEFITHSYPHDWRTK 400

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           KP IFRAT+QWF S++  R+  +  I +V W+
Sbjct: 401 KPIIFRATDQWFCSIDKIREKLLSEIDKVNWL 432



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 172/337 (51%), Gaps = 33/337 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLW +S+ Y  DV I  ++++Q+++ YRK+R T+R++LGNL D++  
Sbjct: 604 PIKMVNQYGADILRLWATSIAYQSDVRISDEIMKQVAENYRKMRNTMRFVLGNLSDFKSC 663

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + +    L  +DQY L +L  +VK  +E+   Y F +  Q+I       LS FY D  KD
Sbjct: 664 DVVETSKLEGVDQYMLVELNQLVKGYKEALNQYDFSEANQLILNCFTNTLSAFYMDFTKD 723

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY        RR  QTVL  +  +++++++P+L   AE++  +        D + AE V
Sbjct: 724 ILYIEKADGLRRRQVQTVLYHYAKTMMKLLSPVLVFTAEELHDHFHC-----DENKAESV 778

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTD 569
           F    P L        +   Y   + L +R +V K LE  R  K+I S++EAK+ + F D
Sbjct: 779 FLEPKPELLNIDNAESIKAYY--DRFLMVRKDVMKALEDLRNEKVIKSNMEAKLTICFKD 836

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +    ++L          + L+++FI+++VE+     +            LVE  D  ++
Sbjct: 837 EYEDMAQL---------VNDLKQLFIVAKVELTDDLTD------------LVEF-DTAYM 874

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              +  G +C RCWNY  +     E   LC RC++V+
Sbjct: 875 KAEKFNGIQCPRCWNYYDEDEMEGE---LCHRCHDVM 908


>gi|304385164|ref|ZP_07367510.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329358|gb|EFL96578.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 936

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRGKKPV WS SS +A+AEAE+
Sbjct: 142 FKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRGKKPVFWSWSSESAMAEAEV 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + YA    VS      G+L++   D    VWTTTPWT+PA+  + ++A   
Sbjct: 202 EYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWTTTPWTIPASEGITIDAGFD 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKT 182
           Y+VV+           PA           D +K   ++A+D +     ++G + V   KT
Sbjct: 254 YSVVK-----------PAG----------DDRK--FVIATDRLSYATEQFGWQDVETIKT 290

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL I 
Sbjct: 291 VRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTAPGFGEDDFGVGKEYGLDIF 350

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKKP 
Sbjct: 351 VPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALLKQMDYTHSYPFDWRTKKPI 409

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 410 IFRATPQWFASVDKIRDQILDALKDVKFLP 439



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 181/338 (53%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 610 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 669

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 670 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 729

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L            E
Sbjct: 730 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL--------SEPEE 781

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           FV  ++ P + E   +     +  W  + +LRT V K LE AR  K+IG S+EAK  L+ 
Sbjct: 782 FVQLAEMPEVQE--LSGAADLLAKWQTVKKLRTHVLKALEEARDQKMIGKSMEAKATLYL 839

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           D+A+      +    + + D L+ I I+SQ+EV         R++  + E       +V 
Sbjct: 840 DEAT------KQVVDELNVD-LRLILIVSQLEV---------RDLAEAPEDAASFDGQVA 883

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + ++ AEG  CERC    T VGS    PTLC+ C  ++
Sbjct: 884 VQITPAEGEVCERCRMTKTDVGSDEHFPTLCASCAAIV 921


>gi|26335861|dbj|BAC31631.1| unnamed protein product [Mus musculus]
          Length = 560

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 197 SAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLVYRSYKPVYWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++  PP    L +   P + + VWTT PWT+PAN A+    +
Sbjct: 257 ELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVLVWTTQPWTIPANQAICYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S  G++         I+A D +  + +   T   +  
Sbjct: 316 AKYAVV---------------KCSASGHLY--------ILAEDKIAPVASALETTFDVVA 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             +G DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 353 AFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVHTAPAHGMEDYSVASQHSLPM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD+ G FT+ AG +     VL +G   V+K L    +++ EE   H YP DWRTK P
Sbjct: 413 DCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKNVLKEENIVHSYPCDWRTKTP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA +++  VK++P
Sbjct: 473 VLIRASKQWFVNITDIKAAAKESLKTVKFIP 503


>gi|187734702|ref|YP_001876814.1| isoleucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424754|gb|ACD04033.1| isoleucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 909

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 135/387 (34%), Positives = 208/387 (53%), Gaps = 50/387 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF+R GV+ DW NPYLT+ P YEA  + VF ++   G +Y+ +KPV WS  + TALAEAE
Sbjct: 142 SFRRLGVFGDWENPYLTMKPAYEANILRVFAKLVEDGAVYQSRKPVQWSYGAYTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           ++Y E  VS S++  F ++  P               + +WTTTPWT+PAN  +A++ + 
Sbjct: 202 IDYKE-KVSSSVFVRFPLLDNPLGLKA---------SMVIWTTTPWTLPANVGLALHPRF 251

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKK 181
            Y                       G  +K+ +   +I+  DL+     K G  L    +
Sbjct: 252 TYVA---------------------GRFMKNGQTENLIIVKDLLDAFAQKTGWALAETIR 290

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G++LENC   HP  +R   +++  D++TT++GTG+VH APGHG +DY    +YGLP+
Sbjct: 291 EFKGAELENCEARHPFLSRTSTIILA-DFVTTDTGTGIVHIAPGHGADDYNVGRQYGLPV 349

Query: 242 LSPVDDEGKFTEEAG--KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           LSPVDD+GK+TEE G     G  V  D N  ++  L++  +L   E Y H+YP+ WR+K 
Sbjct: 350 LSPVDDDGKYTEEVGVPSLVGKHVF-DANKDIISMLEQGNNLFGVEEYRHQYPHCWRSKT 408

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSS 349
           P IFRA EQ+F S++  R  A++ I +V+W+P           +  P +     R W   
Sbjct: 409 PIIFRAVEQFFISMDKLRPQALEEIDKVQWLPAWGRNRIYGTVEARPDWCISRQRTWGVP 468

Query: 350 V----DYTGDVMIGPQVLRQMSDIYRK 372
           +    D  G  ++   ++R+++D+  K
Sbjct: 469 LPVFFDENGKAVLDAALVRKIADMVEK 495



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 163/336 (48%), Gaps = 50/336 (14%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD++RLW +SVD+  +V  G  + +Q+++ YR+LR TLR LLGN+  +     +++ +
Sbjct: 618 YGADIVRLWAASVDWQNEVPFGEDLFKQVTEPYRRLRNTLRILLGNISGFDFAAQAVAPE 677

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            +P++D++ L +L  +++   ++YE+Y F K F  I +F   DLS  Y D  KDRLY   
Sbjct: 678 HMPILDRWILERLNAVIRETLKAYEAYDFRKAFSAINQFCTSDLSALYVDTTKDRLYCDA 737

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
           ++S  RR+ QT ++    ++ R++APIL   A++ W+     Y   +GS  E  F +  P
Sbjct: 738 SSSVRRRATQTAMTIIFKALCRLLAPILAFTADEAWE-----YAGYEGSVHEQDFPAPMP 792

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA-- 574
             D +  +           ++    E+  V++VA     I   ++AKV+   ++AS+   
Sbjct: 793 EYDTQEAS----------SVISRLQEIRSVIQVA-----IEEQVKAKVFSKNNEASITLT 837

Query: 575 ---SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
              +   ++     D       FII+ ++V              +G  L           
Sbjct: 838 VPVNESEDVVALLEDRAFATEFFIIADLDV-------------KTGPELA-------ASA 877

Query: 632 SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           ++ E + C RC  Y        E   +C RC EVL+
Sbjct: 878 AKTEHAMCPRCRRYEPA----AEGGDVCERCAEVLS 909


>gi|301769279|ref|XP_002920059.1| PREDICTED: LOW QUALITY PROTEIN: isoleucyl-tRNA synthetase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 1059

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 187/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADW N Y T D +YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEA
Sbjct: 244 SAFIRWGIMADWTNCYHTFDRKYEAKQLRIFYQMYEKGLIYRSYKPVFWSPSSRTALAEA 303

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRS+Y  F ++   P    +++   P +   VWTT PWT+PAN AV     
Sbjct: 304 ELEYNPEHVSRSVYVKFPVLKPSPKLVSIIDGSSP-VSFLVWTTQPWTIPANQAVCYMPD 362

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             YAVV               K SR G++         I+A+D V ++ +   T   +  
Sbjct: 363 ANYAVV---------------KCSRSGDLY--------ILAADKVTSVASALETTFEVIS 399

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG ED+  + ++ LP 
Sbjct: 400 TFSGVDLENGTCAHPLIPDKASPLLPANHVTMTKGTGLVHTAPAHGMEDFSVASQHNLPT 459

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L     L+ EE   H YPYDWRTKKP
Sbjct: 460 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKP 519

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF  +   +  A + + +VK++P
Sbjct: 520 VVIRASKQWFVHITDIKATAKELLKKVKFIP 550



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 168/343 (48%), Gaps = 32/343 (9%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V + P VL    D   KLR TLR+ LGN+  +    +S+ 
Sbjct: 736  PPYGADVLRWWVAESNVFTEVTVSPSVLNAARDDISKLRNTLRFFLGNVAGFNPETDSVP 795

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 796  VNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 855

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR +APILPHLAE+V+Q++P  Y+ E  S    VF + 
Sbjct: 856  EHAGGPKRRSCQTALAEILDVVVRSLAPILPHLAEEVFQHIP--YSKEPRS----VFRTG 909

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 910  WIRTSSIWKK----------PGLEEAIESTCAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 959

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + SQ  +L   P  +  + I   G +L+  EG D    
Sbjct: 960  FEIVEMLQAEETSSTSQLNELMMASQTTLLSQEPPSVTTDVIERKGTFLINLEGGDIREE 1019

Query: 626  -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                + V+     KC RCW Y+ +         LC RC EV+ 
Sbjct: 1020 SSYKVIVTPTTKEKCPRCWKYTAESSD-----ALCPRCAEVVG 1057


>gi|432940699|ref|XP_004082722.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Oryzias
           latipes]
          Length = 1007

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 138/332 (41%), Positives = 192/332 (57%), Gaps = 28/332 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F+R+GV ADW   Y T D  YEAAQ++VF +M  +G +Y+  KPV WSPSSRTALAEA
Sbjct: 189 AAFQRWGVMADWEQCYYTFDGPYEAAQLKVFQEMYSKGLVYQDYKPVFWSPSSRTALAEA 248

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSR++YA F + + PP       E L D+ L VWTT PWT+PAN AV     
Sbjct: 249 ELEYNPEHVSRAVYATFALTTPPPGLPA--EEGLDDVSLLVWTTQPWTLPANQAVCYMPN 306

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y+VV+                       +      ++VA++    L A  GT+L    
Sbjct: 307 AEYSVVK-----------------------RADTSQLLLVAAERAAGLAALLGTELRSVS 343

Query: 182 TLAGSDLENCRYVHPVD-NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           T  GS LE     HP++   Q P ++  +++T   GTGLVHTAP HG EDY  + ++ LP
Sbjct: 344 TFTGSQLEGGMCTHPMNPGVQVP-LLPANHVTMAKGTGLVHTAPAHGMEDYSVASQFKLP 402

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           +   VDD+G+FTE AG +  GL VL +G   V+  L E  +L++E+   H YPYDWRTK+
Sbjct: 403 VDCMVDDDGRFTELAGPQLQGLSVLTEGTEKVISMLRENGALVLEQQCVHSYPYDWRTKQ 462

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P + R ++QWF +    R  A + + +V+ +P
Sbjct: 463 PVLIRPSKQWFINTLSLRDKAKEVLQKVQVLP 494



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 166/353 (47%), Gaps = 44/353 (12%)

Query: 335  APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWRVGNS 392
            AP YGADVLR WV+  +   ++ IG   L    D   KLR TLR+LLGNL   D R   S
Sbjct: 678  APAYGADVLRWWVAESNIFSELQIGSNALNSARDSISKLRNTLRFLLGNLQGFDPRT-QS 736

Query: 393  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
            +    +  +DQY L  L      + ++Y  +   ++ +++Q F+  DLS+FYF + KDRL
Sbjct: 737  VDAKRMHYVDQYMLHLLRQFSMKVTDAYSEFDASRVIRLLQAFVTRDLSSFYFSIIKDRL 796

Query: 453  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
            Y     S  RRSCQT L   L  + R +APILPHLAE+V+Q  P           + +F 
Sbjct: 797  YCDPEDSPGRRSCQTALEEILDGVTRSVAPILPHLAEEVYQLAP------GHERGDTLFR 850

Query: 513  SKW---------PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
            S W         P L+E           F   I   +      L VA    L+   +E+ 
Sbjct: 851  SGWIKSSSVWQRPGLEEAVEGACAIRDSFLASIAS-KNAAQYDLTVAIQPGLLFELMES- 908

Query: 564  VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS--TPNGLIRN----IPYSG 617
              L  +  S +S+L E+  A        R+ ++++   LP    P  L+R+    I   G
Sbjct: 909  --LQEEPTSTSSQLVELMMAA-------RVNLVTE---LPRDLDPQALVRHGSFLINLEG 956

Query: 618  EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
             ++ E +    I V+ + G++C RC  Y+++         LCSRC  V++  P
Sbjct: 957  GFIRE-ESPFSIAVAPSAGARCPRCRRYTSESAD-----CLCSRCQAVVSQAP 1003


>gi|452851098|ref|YP_007492782.1| Isoleucyl-tRNA synthetase [Desulfovibrio piezophilus]
 gi|451894752|emb|CCH47631.1| Isoleucyl-tRNA synthetase [Desulfovibrio piezophilus]
          Length = 938

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 190/332 (57%), Gaps = 34/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W  PY+T++PEYEAA     G+   +  + RGKKP++W    RTALAEAE+
Sbjct: 141 FKRLGVLGVWETPYMTMNPEYEAATARELGKFMERDGVVRGKKPIYWCCDCRTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E H S SIY  F +  A  +   L N  +  L +A+WTTTPWT+P N  VAV+    
Sbjct: 201 EY-EDHTSPSIYVRFPL--ADENAQKLGNIDISRLYIAIWTTTPWTIPDNMGVAVHPDFD 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+V+                             F I+A  L+    AK+G     I KT
Sbjct: 258 YAIVK-------------------------SNNDFYILAEGLLEECSAKFGWESPEIIKT 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G++LE  +  HP+ NR  P+V+  DY+T E+GTG VHTAPGHG+ED+ T LKY L + 
Sbjct: 293 IRGAELEGLQAKHPIYNRPSPIVL-ADYVTLETGTGCVHTAPGHGREDFETGLKYRLEVY 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++D G+F  E   FSGL+V  + N AV+K L +  +L+  E   H YP+ WR KKP I
Sbjct: 352 SPMNDRGEFLPEVEFFSGLNVW-EANPAVIKKLTDIGNLLASEDISHSYPHCWRCKKPVI 410

Query: 303 FRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
           FRAT QWF  ++    R  ++DAI  +V W+P
Sbjct: 411 FRATTQWFVGMDENSLRDRSLDAIRNKVDWIP 442



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 182/348 (52%), Gaps = 27/348 (7%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           +IG V  + PQE    YGA++LR+WVS+ +Y  D+ I  + L ++ D YR++R T RYLL
Sbjct: 610 SIGNV--IAPQEIIDKYGAEILRMWVSASNYQEDIRISDETLNRLVDAYRRIRNTCRYLL 667

Query: 382 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 441
            NL+D+     ++ +DL  +D+YAL  +      I+ +Y+S++F K++  +    +VDLS
Sbjct: 668 SNLNDFDPQKKVAANDLLPLDKYALDMVSRHHAEIQNAYKSFEFHKVYHTLHNLCVVDLS 727

Query: 442 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT- 500
            FY D+ KDRLY    +   RRS QTVL   LL +++ +APIL   AE+ +Q++  A   
Sbjct: 728 AFYLDIIKDRLYVEEESGLKRRSAQTVLWQILLMLLQDMAPILSFTAEEAFQSMSDAIKG 787

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
             D +   F        +D K       E+  W K+  +R+ VNK +E  R   ++G SL
Sbjct: 788 ALDQTKTVFALRYSPDSVDLK-----ESELADWEKLTMIRSVVNKAIEPNRKNGVVGKSL 842

Query: 561 EAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGE 618
           +A+V L+  +     RL    T        Q  FI+S+V +  L   P        Y  E
Sbjct: 843 DAQVTLYASED--IHRLIYSETLDE-----QEFFIVSKVIMAHLEDAPTD-----AYEDE 890

Query: 619 YLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + E K    + V  A G KCERCW  + ++G+    P  C RC +VL
Sbjct: 891 EVPELK----VSVEAAPGGKCERCWRITEELGTDPSFPDACPRCSQVL 934


>gi|256850938|ref|ZP_05556327.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661152|ref|ZP_05862066.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256616000|gb|EEU21188.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548089|gb|EEX24065.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 930

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 191/331 (57%), Gaps = 32/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV ADWN+PY+TL P++EA +I VFG+M  +GYIY+G KPV+WSPSS + LAEA
Sbjct: 137 TDFKRLGVMADWNHPYITLQPKFEAEEIRVFGKMFEKGYIYKGLKPVYWSPSSESTLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +IY  F++        G+L+    D  + +WTTTPWT+P N  + VN K
Sbjct: 197 EVEYHDVK-SPAIYVAFQVEDG----KGILDN---DTYMVIWTTTPWTIPVNVGITVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y+++++                        +++ F+I  S L    E        +  
Sbjct: 249 FEYSLIKVAG----------------------EERKFVIGTSQLEKVAEDLDWQDYEVVD 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+D +     HP+ ++   +V+   Y+T E GTGLVH A G G++DY    KYGLP+
Sbjct: 287 TFKGTDFDRMTVKHPLYDK-TSLVMNDTYVTAEDGTGLVHNATGFGEDDYNVGKKYGLPV 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            SP+DD+G++T++    + + V   D N  V K L+E+ +L+    + H YP+DWRTKKP
Sbjct: 346 YSPMDDQGRYTKDIPDPNLVGVFYDDANKMVTKQLEEKRALLKLSFFTHSYPHDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 406 VIYRATTQWFASVDAFRDQILAEIEKTNFTP 436



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 177/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 616 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKANRVAYKD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  IDQY    L  +VK+   +Y  + F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 676 LRSIDQYMEVLLNKLVKDCLAAYNKFDFTNVYKMVFKFISNELSAFYLDFAKDVLYIEGE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV+   L+ I +V+ PILPH  E+ W     +Y  ED    E+V  S  P 
Sbjct: 736 DSLPRRAMQTVIYDALVKITKVMTPILPHTMEEAW-----SYLKED---REYVQLSDMPQ 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++       +  +  W + ++ R +V K LE AR  KLIG S EA V ++  + + A   
Sbjct: 788 VESFDNEAEL--LQNWSEFMKFRDDVLKALEEARNAKLIGKSFEACVDVYPTEHTKA--- 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                 K +AD +++I I+S++ VL S         P + E     K    + V  AEG+
Sbjct: 843 ---MFNKLNAD-MRQILIVSKLNVLDS-------EAPDNAEEFETAK----LVVKHAEGT 887

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VG+    P LC RC E++
Sbjct: 888 VCDRCRMTRTDVGNNANLPKLCGRCAEIV 916


>gi|345797961|ref|XP_536121.3| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial, partial [Canis
           lupus familiaris]
          Length = 963

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 186/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+GV ADWNN Y T D +YEA Q+ +F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 148 SAFIRWGVMADWNNCYYTFDGKYEAKQLRIFYQMYEKGLVYRSYKPVFWSPSSRTALAEA 207

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P    L++   P +   VWTT  WT+PAN AV     
Sbjct: 208 ELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSP-VSFLVWTTQAWTIPANQAVCYMPD 266

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V+  +   GD                       ++A+D V ++ +   T   +  
Sbjct: 267 SKYAIVKCST--SGD---------------------LYVLAADKVTSVASALETTFEVIS 303

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G+DLE     HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ LP 
Sbjct: 304 TFSGADLEGGTCAHPLIPDKASPLLPASHVTMTKGTGLVHTAPAHGMEDYSVASQHNLPT 363

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG K     VL +G   V+K L     L+ EE   H YPYDWRTKKP
Sbjct: 364 DCLVDEDGVFTDVAGPKLQNKAVLEEGTDVVIKMLQAAKHLLKEERLVHSYPYDWRTKKP 423

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 424 VVIRASKQWFVNITDIKATAKELLKKVKFIP 454



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGADVLR WV+  +   +V I P VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 640 PPYGADVLRWWVAESNVFTEVTISPSVLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 699

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
            +++ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 700 VNNMHVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 759

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+A         + VF + 
Sbjct: 760 EKAGDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHVPYA------KEPKSVFRTG 813

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 814 WIRTSSIWKK----------PGLEEAIESTCAMRDSFLGSIPGKNAAEYEVIIVIEPGLL 863

Query: 575 SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
             + EM  A+  + T  L  + + SQ  +L   P  +  + I   G +L+  EG D    
Sbjct: 864 FEIIEMLQAEETSSTSQLNELMMASQTTLLSQDPPLVTTDVIERQGTFLINLEGGDIREE 923

Query: 626 ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              KV +  +  E  KC RCW Y+ +        TLC RC EV+
Sbjct: 924 SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVV 960


>gi|355695425|gb|AES00006.1| isoleucyl-tRNA synthetase 2, mitochondrial [Mustela putorius furo]
          Length = 932

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEA
Sbjct: 122 SAFIRWGIMADWNNCYYTFDRKYEAKQLRLFYQMYEKGLIYRSYKPVFWSPSSRTALAEA 181

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSR+IY  F ++   P    L++   P +   +WTT PWT+PAN AV     
Sbjct: 182 ELEYNPEHVSRAIYVKFPLLKPSPQLVSLIDGSSP-VSFLIWTTQPWTIPANQAVCYMPD 240

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         I+A+D V  + +   T   +  
Sbjct: 241 TKYAVV---------------KCSKSGDLY--------ILAADKVTAVASALETTFEVIS 277

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE     HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP 
Sbjct: 278 TFSGVDLETGTCAHPLIPDKDSPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLPT 337

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L     L+ EE   H YPYDWRTKKP
Sbjct: 338 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQASKHLLKEEKLVHSYPYDWRTKKP 397

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 398 VVIRASKQWFVNLTDIKATAKELLKKVKFIP 428



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 170/346 (49%), Gaps = 35/346 (10%)

Query: 332 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VG 390
           P + P YGADVLR WV+  +   +V I P  L    D   KLR TLR+LLGN+  +    
Sbjct: 610 PNKEPPYGADVLRWWVAESNVFTEVTISPSALNAARDDISKLRNTLRFLLGNVAGFNPET 669

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +S+  +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LS+FYF + KD
Sbjct: 670 DSVPVNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSSFYFSIIKD 729

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY        RRSCQT  +  L  +VR +APILPHLAE+V+Q++P+A         + V
Sbjct: 730 RLYCENADDPKRRSCQTAFAEILDVVVRSVAPILPHLAEEVFQHIPYA------KEPKSV 783

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIG-SSLEAKVYLFTD 569
           F + W      W+             LE   E    +  +  G + G ++ E KV L   
Sbjct: 784 FRTGWIRTSSIWKK----------PGLEEAIESTCAMRDSFLGSIPGKNAAEYKVTLVI- 832

Query: 570 DASLASRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLV--EGKD 625
           +  L   + EM  A+  + T  L  + + SQ  +L   P      I   G +L+  EG D
Sbjct: 833 EPGLLFEIIEMLQAEETSSTSQLNELMMASQTTLLSQEPRSTTDVIERKGTFLINLEGGD 892

Query: 626 -----KVWIGVSRAEGSKCERCWNYSTQVGSFVEHP-TLCSRCYEV 665
                   + V+     KC RCW Y+       E P  LC RC EV
Sbjct: 893 IREESSYKVIVTPTTKEKCPRCWKYT------AESPDALCPRCSEV 932


>gi|297205818|ref|ZP_06923213.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148944|gb|EFH29242.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 960

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 191/331 (57%), Gaps = 32/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV ADWN+PY+TL P++EA +I VFG+M  +GYIY+G KPV+WSPSS + LAEA
Sbjct: 167 TDFKRLGVMADWNHPYITLQPKFEAEEIRVFGKMFEKGYIYKGLKPVYWSPSSESTLAEA 226

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +IY  F++        G+L+    D  + +WTTTPWT+P N  + VN K
Sbjct: 227 EVEYHDVK-SPAIYVAFQVEDG----KGILDN---DTYMVIWTTTPWTIPVNVGITVNPK 278

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y+++++                        +++ F+I  S L    E        +  
Sbjct: 279 FEYSLIKVAG----------------------EERKFVIGTSQLEKVAEDLDWQDYEVVD 316

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+D +     HP+ ++   +V+   Y+T E GTGLVH A G G++DY    KYGLP+
Sbjct: 317 TFKGTDFDRMTVKHPLYDK-TSLVMNDTYVTAEDGTGLVHNATGFGEDDYNVGKKYGLPV 375

Query: 242 LSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            SP+DD+G++T++    + + V   D N  V K L+E+ +L+    + H YP+DWRTKKP
Sbjct: 376 YSPMDDQGRYTKDIPDPNLVGVFYDDANKMVTKQLEEKRALLKLSFFTHSYPHDWRTKKP 435

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 436 VIYRATTQWFASVDAFRDQILAEIEKTNFTP 466



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 177/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 646 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKANRVAYKD 705

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  IDQY    L  +VK+   +Y  + F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 706 LRSIDQYMEVLLNKLVKDCLAAYNKFDFTNVYKMVFKFISNELSAFYLDFAKDVLYIEGE 765

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV+   L+ I +V+ PILPH  E+ W     +Y  ED    E+V  S  P 
Sbjct: 766 DSLPRRAMQTVIYDALVKITKVMTPILPHTMEEAW-----SYLKED---REYVQLSDMPQ 817

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++       +  +  W + ++ R +V K LE AR  KLIG S EA V ++  + + A   
Sbjct: 818 VESFDNEAEL--LQNWSEFMKFRDDVLKALEEARNAKLIGKSFEACVDVYPTEHTKA--- 872

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                 K +AD +++I I+S++ VL S         P + E     K    + V  AEG+
Sbjct: 873 ---MFNKLNAD-MRQILIVSKLNVLDS-------EAPDNAEEFETAK----LVVKHAEGT 917

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C+RC    T VG+    P LC RC E++
Sbjct: 918 VCDRCRMTRTDVGNNANLPKLCGRCAEIV 946


>gi|410667639|ref|YP_006920010.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
 gi|409105386|gb|AFV11511.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
          Length = 935

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/359 (40%), Positives = 203/359 (56%), Gaps = 42/359 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PYLTL P YEA QI +FG+M+ +GYIY+G KPV+W     TALAEAE+
Sbjct: 141 FKRLGVQGDWDHPYLTLHPTYEAVQIGIFGEMAKRGYIYKGMKPVYWCTDCETALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E   S SIY +F     P      L        + +WTTTPWT+P N A++++   +
Sbjct: 201 EYQEDE-SDSIYVLF-----PIRDGKELINVDEKTYVLIWTTTPWTIPGNQAISLHPDYR 254

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EAKWGTKLVIKKT 182
           Y + E+                       D ++V  IVA +L+  + E K  T   I   
Sbjct: 255 YVLAEV-----------------------DGRRV--IVAEELLRQVAEIKGETHPPILGA 289

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE  R  HP  +R   ++I G+++T E GTG VHTAP HG ED+    KYG+P+L
Sbjct: 290 WQGRELEGIRCAHPFYDRDS-LLILGEHVTLEQGTGAVHTAPAHGTEDFEVCQKYGIPVL 348

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           S VD  G++  EAG F+G +V+ + N  V+  L+ +  L  +    H+YP+ WR K+P +
Sbjct: 349 SLVDGSGRYLPEAGIFAG-EVIWESNQKVIAELERRGLLYHKSKIVHQYPHCWRCKEPLM 407

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQ 361
           FRATEQWFAS++GFR+ A+ AI  V+W+     P +G + +R   S V   GD  I  Q
Sbjct: 408 FRATEQWFASIDGFRKEALKAIEGVRWI-----PAWGEERIR---SMVAERGDWCISRQ 458



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 196/337 (58%), Gaps = 26/337 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGADVLRLWV+S DY  D+ +   +++Q+++ YRK+R T R+LLGNL+D+    +S+ Y+
Sbjct: 616 YGADVLRLWVTSADYRNDMAVSLNIMKQLAEAYRKIRNTFRFLLGNLYDFDPEKDSLPYE 675

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L ++D++ LF+L  +++ +  +YE  +F  ++  I  F +VD+S+FY D+ KD LY G 
Sbjct: 676 QLSLLDKWILFRLHQLIQRVTRAYEDSEFHIVYHAISTFCVVDMSSFYLDITKDILYCGA 735

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR  QTVL      +VR++AP+L   AE++W  LP A        A  V  ++WP
Sbjct: 736 AESRERRGIQTVLYEAANVLVRLLAPVLCFTAEEIWSFLPGAR-----ERAVSVHLAEWP 790

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            ++ ++    + +   WGKIL LR +V++ LE+AR  KLIG S EA+V L+ ++      
Sbjct: 791 QVNRRYLDPELEKT--WGKILSLRDQVSRALELARQEKLIGPSTEAEVSLYPEEEETLRF 848

Query: 577 LREMCTAKHDADTLQRIFIISQV---EVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           LR +         L  +FI+S V   EV  + P G    +P   ++ ++      I + +
Sbjct: 849 LRRV------EQDLPALFIVSAVKVHEVWEAAPAG---AVPAEDDWSLK------IVIRK 893

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
           A G KC RCW Y   VG F +HP LC RCYEV+  QP
Sbjct: 894 APGKKCVRCWLYRESVGEFSDHPDLCERCYEVVRQQP 930


>gi|194227336|ref|XP_001488103.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Equus
           caballus]
          Length = 1012

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 191/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYCTFDGSYEARQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGS-PPVSFLVWTTQPWTIPANQAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V               K S+ G++         I+A+D V ++ +   T   +  
Sbjct: 316 SKYALV---------------KCSKSGDLY--------ILAADKVTSVASVLETTFEVIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G DLE+    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 353 TFSGVDLESGTCTHPLIPEKVSPLLPANHVTMTKGTGLVHTAPAHGMEDYSVASQHNLST 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 473 VVIRASKQWFVNLTDVKTTAKELLKKVKFIP 503



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 689  PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVTGFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +++ +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749  VNNMYVIDQYMLHLLQDLANKITDSYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L+  L  +VR  APILPHLAE+V+Q++P++         + VF + 
Sbjct: 809  ENAEDPKRRSCQTALAQILDVMVRSFAPILPHLAEEVFQHIPYS------KEPKSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +          +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAMESACAMRDSFLGSIPGKNAAEYKVTIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  A+  + T  L  + + S+  +L   P  +  + I   G +L+  EG D    
Sbjct: 913  FEIIEMLQAEETSSTSQLNELMMASETTLLSQEPRTIAGDVIELQGTFLINLEGGDIREE 972

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               KV +  +  E  KC RCW Y+ +        TLC RC EV+
Sbjct: 973  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVV 1009


>gi|312143927|ref|YP_003995373.1| isoleucyl-tRNA synthetase [Halanaerobium hydrogeniformans]
 gi|311904578|gb|ADQ15019.1| isoleucyl-tRNA synthetase [Halanaerobium hydrogeniformans]
          Length = 931

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/332 (41%), Positives = 192/332 (57%), Gaps = 35/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GVW +W++PYLTL PEYE  QIEVFG+M+  G  YRGKKPVHW P   TALAEAE+
Sbjct: 141 FKRLGVWGEWDDPYLTLSPEYEVKQIEVFGEMAKNGLFYRGKKPVHWCPHCETALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVWTTTPWTVPANAAVAVNAKL 122
           EY E     SIY  F +          LN+   D G + +WTTTPWT+P+N A+A +   
Sbjct: 201 EYGEDRAP-SIYVKFPLKDEFEVGGVSLNK---DNGYVVIWTTTPWTIPSNMAIAFHPDY 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK--LVIK 180
            Y VVE Q    G+                      +I+A +LV ++    G K   +I 
Sbjct: 257 PYVVVEAQ----GEK---------------------LIMAKELVSSVMEISGIKDYEIIS 291

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK-YGL 239
           +  +  +LEN +  HP  +R   ++I GD++T E GTG VHTAPGHG +D+V   + YGL
Sbjct: 292 EDFSAKELENKKCRHPFVDRD-SLLILGDHVTLEQGTGCVHTAPGHGHDDFVVGHQEYGL 350

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            + +P+D+ G FTE+AG F+G     + N+ V   L E+  L+     +H+YP+ WR K 
Sbjct: 351 EVYAPMDNRGYFTEKAGDFAGKST-DEVNIMVTDKLKEKNLLMDLSFIDHQYPHCWRCKG 409

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
             +FRAT+QWFAS++  +   + AI +V+W P
Sbjct: 410 NLLFRATDQWFASIDAIKDKTLKAISEVEWHP 441



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/337 (36%), Positives = 199/337 (59%), Gaps = 23/337 (6%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 389
           P +    YGAD+LRLWV+S D+  DV +   +L+Q S++YR++R T R++LGN+ D+ + 
Sbjct: 614 PHKVIDQYGADILRLWVASSDFKNDVKVSDNILKQNSEVYRRIRNTYRFVLGNVSDFDIE 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            N I Y+D   +D++ + +L++++K + ++YE Y++ +++  +  F  V++S+ Y D+ K
Sbjct: 674 KNYIKYEDRKELDRWIMIRLQDLIKKVTKAYEKYEYHRVYHDVHNFCTVEMSSLYMDITK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT GT S +RRS Q+ L   ++++V ++AP+LPH +E+VWQ L      +   A E 
Sbjct: 734 DRLYTDGTDSLSRRSAQSTLYDIMMALVVMLAPLLPHTSEEVWQFLG-----DKVKAKES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           VF S WP L E +    + +   W  +L++R +V+K LE+AR  K IG+SLEA V L   
Sbjct: 789 VFLSDWPELREDYYDQKLTDK--WEDLLKIRKDVSKALELARADKKIGNSLEAGVELKGA 846

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
             +    L +  T       L  +FI+SQVE+     + L  N  Y GE     +  V +
Sbjct: 847 SKNQIELLEDELT------QLADLFIVSQVEL----NDELSENEAYLGE-----ESSVLV 891

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            ++ A+G KC+RCW Y   VG   EH  +C RC  V+
Sbjct: 892 KINEAKGEKCDRCWKYDETVGHGEEHQDICDRCASVI 928


>gi|157960911|ref|YP_001500945.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082333|sp|A8H1H3.1|SYI_SHEPA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|157845911|gb|ABV86410.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 940

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 200/332 (60%), Gaps = 28/332 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV+ADW NPYLT+D   EA  +    ++   G++++G KPVHW     +ALAEAE+
Sbjct: 141 FIRLGVFADWQNPYLTMDYSTEANIVRSLSKVIDNGHLHKGVKPVHWCTDCGSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY E  +S +I   F +V  P   +   +NE+  ++ + +WTTTPWT+PAN A+AV A +
Sbjct: 201 EY-EDKMSPAIDVAFTVVDKPALLAKFGVNEYPHNISMVIWTTTPWTLPANRALAVGANV 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
           +Y +VE+  + EG + A                   +++A+DL  +   ++G +   +  
Sbjct: 260 EYTLVEM--VKEGQAQA-------------------LVLATDLYESCVERFGAESHTVLG 298

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+AGSDLE  R+ HP  +   PV++G D++T +SGTG+VHTAPGHGQ+D+V   KYGL +
Sbjct: 299 TVAGSDLELLRFNHPFYDFDVPVILG-DHVTVDSGTGVVHTAPGHGQDDFVVGQKYGLEV 357

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            +PV D G +  +   F+GL V    N  VV+ L+E+ +L+     +H YP+ WR K P 
Sbjct: 358 ANPVGDNGVYKPDTEIFAGLHVF-KANKNVVELLEEKGALLNHVQIKHSYPHCWRHKTPI 416

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRAT QWF S++  G RQ A+  I Q +W+P
Sbjct: 417 IFRATPQWFISMDQKGLRQQALGEIEQTQWIP 448



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 195/355 (54%), Gaps = 30/355 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  Q+L + +D Y
Sbjct: 598 TVDGQGRKMSKSVGNV--IAPQHVTNKLGADILRLWVAATDYSGEMTVSDQILNRSADAY 655

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R++R T R+LL N++ +    + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFNPETDMVAVEDMVALDRWVVRRAAALQQELLEAYDQYNFHLVT 715

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKEDSNARRSCQSALYLISEAMVRWIAPILSFTAD 775

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           ++W+ LP       G   E+VF   W    +           +W ++L +R EVNKV+E 
Sbjct: 776 EIWKLLP-------GERGEYVFTETWYQGLQSVALESDLSDEYWDQLLAVRAEVNKVIEN 828

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPN 607
           AR  K +G SLEA+V L+ D+A L + L  +       D L+ + + S+ EV  L   P+
Sbjct: 829 ARREKQVGGSLEAEVTLYADEA-LQAVLENL------GDELRFVLLTSKTEVVALAQAPS 881

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
             I     S          + + + ++E  KCERCW++   VG+  EHPTLC+RC
Sbjct: 882 DAIETELAS----------LKLSLKKSEAEKCERCWHHREDVGAVAEHPTLCTRC 926


>gi|225556374|gb|EEH04663.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1505

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/343 (40%), Positives = 192/343 (55%), Gaps = 39/343 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F ++ V ADW N + T+D  +E  Q++VF +M  +G I+R  KPV+WSPSSRTALAE
Sbjct: 645 MKGFHKWAVMADWENAWKTMDKSFEKRQLDVFLKMVEKGLIHRRFKPVYWSPSSRTALAE 704

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H S +    F +VS P     +L     ++   +WTTTPWT+PANAA+AV+ 
Sbjct: 705 AELEYKEDHKSTAGLVKFPLVSMPSKLRDMLPSNTTEISAVIWTTTPWTLPANAAIAVSP 764

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L+Y++V                        K +K  +++V S     ++     + V  
Sbjct: 765 TLEYSIV------------------------KSEKHGYLVVGSSRREYIQTLLQGEEV-- 798

Query: 181 KTLAGSDLENCRYVH-----PV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
            T+ GS +  C  V      P+  D      VI  D++T +SG+GLVH APGHG EDY  
Sbjct: 799 -TVIGSPILGCELVSESTYLPLFKDGSVPQPVIAADFVTADSGSGLVHCAPGHGMEDYEV 857

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
              +G+   +PVDD G FT+ A        SG  VLGDGN  V++Y++ +  L+ +  YE
Sbjct: 858 CQAHGIASHTPVDDAGLFTDAAMPLNPSMLSGKSVLGDGNREVLRYVESKGQLLAKHTYE 917

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++P
Sbjct: 918 HKYPYDWRSKLPVIVRATEQWFADVSDIRDYALRALEDVQFMP 960



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 165/341 (48%), Gaps = 34/341 (9%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++I   VL+ +     K R T + LLG+L D+    ++ ++ L
Sbjct: 1176 GTDALRLWVASSDYTKDIVISQPVLKTVHTNLHKYRVTFKLLLGSLQDFDPSCTVPHESL 1235

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL  ++   +++Y S++F++    I ++  +D S FY +  KDRL      
Sbjct: 1236 RIIDKIALLQLRKLINICQDAYSSFEFYRAITAINKWANLDFSAFYIESLKDRL------ 1289

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
               RR+ QT L         ++AP++P+L E+ W++ P     +       +     P  
Sbjct: 1290 ---RRAAQTTLCHIYYHFQNLLAPLVPNLVEESWEHTPELIKTKFDPPLHRIMTKPPP-- 1344

Query: 519  DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLR 578
              +W+   + EI+    ++ + T V  + E AR  K +GSSL+  V++     S++    
Sbjct: 1345 --EWQNDELEEIF--PLLMAINTAVKTMQENARNRKEMGSSLQTFVHI-----SVSCSAA 1395

Query: 579  EMCTAKHDADTLQRIFIISQVEV------LPSTPNGLIRNIPYSGEYLVEG---KDKVWI 629
            E    +     LQ +F++S V V      LP  P        YS ++   G   +  VWI
Sbjct: 1396 EASIFEKFGYELQDLFVVSSVTVGYNNAALP--PEIEAAEWKYSSDFEFPGGSARGHVWI 1453

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
               +A   KC RCW Y+  +    + P LC RC +V+   P
Sbjct: 1454 YTPQA--IKCGRCWRYAVPLEPKQDDP-LCQRCIDVVGELP 1491


>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|423317798|ref|ZP_17295695.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
 gi|423321135|ref|ZP_17299007.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
 gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|405596458|gb|EKB69794.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
 gi|405597734|gb|EKB70985.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
          Length = 933

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 193/340 (56%), Gaps = 45/340 (13%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+G KPV+WS SS + LAE
Sbjct: 136 MADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +    R IY  F +        G+L+    D+ L +WTTTPWT+P+N  + VN 
Sbjct: 196 AEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIWTTTPWTIPSNVGITVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           +  Y++VE+                       D KK   ++ SD +P +    G K   +
Sbjct: 248 RFDYSLVEV-----------------------DGKKY--VIGSDRLPAIAEDLGWKDYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
            K L G+D +   Y HP+  +    Q  +V+   Y+T + GTGLVH A G G++DY    
Sbjct: 283 LKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTGLVHNATGFGEDDYRVGQ 342

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKY 291
           KYG+P+ SP+D +G+FT++       D++G    D N  V   L +  +L+    + H Y
Sbjct: 343 KYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSY 399

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 400 PHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 175/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +++ PILPH  E++W  L            ++V  +  P 
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIWGFLK--------EPEDYVQLANMPE 790

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E      + E   WGK ++LR +V K LE AR  KLIG S EA V ++ D  + A  L
Sbjct: 791 VEEYANHDDLLE--NWGKFMKLRDDVLKALEDARNKKLIGKSFEATVTIYPDKETKA-ML 847

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +++     DAD  ++I I+S++ +            P + + L    +   + V  AEG 
Sbjct: 848 QDL-----DAD-FRQILIVSKLTIADG-------EAPDNAKQL----NNASVVVEHAEGE 890

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T +G   + P LC RC +++
Sbjct: 891 VCPRCRMIRTDIGVDPKLPMLCGRCAKIV 919


>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 933

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 193/340 (56%), Gaps = 45/340 (13%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+G KPV+WS SS + LAE
Sbjct: 136 MADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +    R IY  F +        G+L+    D+ L +WTTTPWT+P+N  + VN 
Sbjct: 196 AEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIWTTTPWTIPSNVGITVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           +  Y++VE+                       D KK   ++ SD +P +    G K   +
Sbjct: 248 RFDYSLVEV-----------------------DGKKY--VIGSDRLPAIAEDLGWKDYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
            K L G+D +   Y HP+  +    Q  +V+   Y+T + GTGLVH A G G++DY    
Sbjct: 283 LKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTGLVHNATGFGEDDYRVGQ 342

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKY 291
           KYG+P+ SP+D +G+FT++       D++G    D N  V   L +  +L+    + H Y
Sbjct: 343 KYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSY 399

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 400 PHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 175/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +++ PILPH  E++W  L            ++V  +  P 
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIWGFLK--------EPEDYVQLANMPE 790

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E      + E   WGK ++LR +V K LE AR  KLIG S EA V ++ D  + A  L
Sbjct: 791 VEEYANHDDLLE--NWGKFMKLRDDVLKALEDARNKKLIGKSFEATVTIYPDKETKA-ML 847

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +++     DAD  ++I I+S++ +            P + E L    +   + V  AEG 
Sbjct: 848 QDL-----DAD-FRQILIVSKLTIADG-------EAPDNAEQL----NNASVVVEHAEGE 890

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T +G   + P LC RC +++
Sbjct: 891 VCPRCRMIRTDIGVDPKLPMLCGRCAKIV 919


>gi|381183893|ref|ZP_09892585.1| isoleucyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
 gi|380316214|gb|EIA19641.1| isoleucyl-tRNA synthetase [Listeriaceae bacterium TTU M1-001]
          Length = 851

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 197/330 (59%), Gaps = 38/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  D++NPY+TL PEYEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 71  FKRLGVSGDFDNPYITLKPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 130

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +        G+L        + +WTTTPWT+PAN A+ VN +L 
Sbjct: 131 EY-QDKTSASIYVAFDVTDG----KGVLEN---GTKIVIWTTTPWTIPANMAITVNPELD 182

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA--KWGTKLVIKK 181
           YA+V+                               +VA+ LV +L+   +W    VI K
Sbjct: 183 YAIVKTNGQQ-------------------------YVVANALVDSLKEILEWADAEVI-K 216

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G +L+     HP  +R   +VI G++ T ++GTG VHTAPGHG++D++   KY L +
Sbjct: 217 TVRGKELDRVVAKHPFYDRDS-LVINGEHATADAGTGAVHTAPGHGEDDFIVGQKYELEV 275

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L+P+D  G FT+EA  F GL    D N  V + L E  +L+  +   H YP+DWRTKKP 
Sbjct: 276 LAPLDSRGVFTDEAPGFEGL-FYDDANKLVTEKLKEVGALLKMDFITHSYPHDWRTKKPV 334

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFAS+  FR   ++A+  V W P
Sbjct: 335 IFRATPQWFASINKFRGELLEAVQNVTWTP 364



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 186/333 (55%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWVSSVDY  DV I   +L+Q+S++YRK+R T+R+LLGN+ D+    +++++ +
Sbjct: 544 GADIVRLWVSSVDYQADVRISDDILKQVSEVYRKIRNTMRFLLGNVSDFNPETDTVAFGE 603

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQ+ L +L  +V+N+R SYE ++F  I+  I  F  V LS FY D AKD +Y    
Sbjct: 604 LREVDQFMLVKLNELVQNVRNSYEKFEFSTIYHQINNFCTVMLSQFYMDFAKDVVYIEAA 663

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT----LEDGSAAEFVFES 513
            S  RR+ QTV  A   S+ +++APILPH A++VW NL    T    LED    E     
Sbjct: 664 NSKDRRAMQTVFYAAATSLSKLLAPILPHTADEVWLNLNGDETTSIHLEDLPEVENY--D 721

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
               L +KW  F           L++R +V K LE AR  KLIG S+ AKV L+ D    
Sbjct: 722 DMADLVQKWDAF-----------LDVRDDVQKALEEARNEKLIGKSMLAKVTLYVD---- 766

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           A   +   + + D     ++FI+S  E++P         +  + E  V+G + V + V+ 
Sbjct: 767 AEGEKLFNSLQGD---FAQLFIVSDFELIPG--------LEKANENAVKG-EHVAVEVTV 814

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC      VG+   HPTLC RC  ++
Sbjct: 815 AEGETCERCRVVKKDVGTDPNHPTLCKRCATIV 847


>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 933

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 193/340 (56%), Gaps = 45/340 (13%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+G KPV+WS SS + LAE
Sbjct: 136 MADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYKGLKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +    R IY  F +        G+L+    D+ L +WTTTPWT+P+N  + VN 
Sbjct: 196 AEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIWTTTPWTIPSNVGITVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           +  Y++VE+                       D KK   ++ SD +P +    G K   +
Sbjct: 248 RFDYSLVEV-----------------------DGKKY--VIGSDRLPAIAEDLGWKDYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
            K L G+D +   Y HP+  +    Q  +V+   Y+T + GTGLVH A G G++DY    
Sbjct: 283 LKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTGLVHNATGFGEDDYRVGQ 342

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKY 291
           KYG+P+ SP+D +G+FT++       D++G    D N  V   L +  +L+    + H Y
Sbjct: 343 KYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADKLKKAGALLKLSFFTHSY 399

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 400 PHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 175/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +++ PILPH  E++W  L            ++V  +  P 
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIWGFLK--------EPEDYVQLANMPE 790

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E      + E   WGK ++LR +V K LE AR  KLIG S EA V ++ D  + A  L
Sbjct: 791 VEEYANHDDLLE--NWGKFMKLRDDVLKALEDARNKKLIGKSFEATVTIYPDKETKA-ML 847

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +++     DAD  ++I I+S++ +            P + + L    +   + V  AEG 
Sbjct: 848 QDL-----DAD-FRQILIVSKLTIADG-------EAPDNAKQL----NNASVVVEHAEGE 890

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T +G   + P LC RC +++
Sbjct: 891 VCPRCRMIRTDIGVDPKLPMLCGRCAKIV 919


>gi|315041789|ref|XP_003170271.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345305|gb|EFR04508.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1012

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/343 (41%), Positives = 192/343 (55%), Gaps = 38/343 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + +  DW+N Y T++ ++E  Q+ VF +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 149 MEGFRNWAIMGDWDNAYTTMNKDFERRQLAVFLEMVEKGLIYRRYKPVYWSPSSGTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E H+S +    F +   P       N  L   D+   +WTTTPWT+PANAA+AV
Sbjct: 209 AELEYKEDHISTAALVKFVLDDLPAQV--WENSLLVGNDISAVIWTTTPWTLPANAALAV 266

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           N   +Y +V                 +R G +L  Q ++       L   LE  +    V
Sbjct: 267 NPDFEYTIV---------------YSARHGKLLVAQSRL-----QYLEELLEDHF---TV 303

Query: 179 IKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTS 234
           +   + GS+L N  Y      P   +Q   +I  D++T ++G+G+VH APGHG EDY   
Sbjct: 304 VVPVVMGSELLNSTYRSLFKGPESEKQ--RIIAADFVTADAGSGIVHCAPGHGMEDYEAC 361

Query: 235 LKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 289
           L  G+P  +PVD EG++T  A        +G  VLGDGN AV+KYL E   LI +  Y+H
Sbjct: 362 LALGIPAYAPVDGEGRYTRFAMPSQPDLLTGKAVLGDGNHAVIKYLSENGILIHKHAYKH 421

Query: 290 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           KYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 422 KYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 464



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 36/338 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPKNEVPYESL 737

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              D+ AL QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HATDKIALVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSGS 797

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV---FESKW 515
             +RR+ QT L      +  ++ PI+P L E+ W++ P       G+   F+   F+  +
Sbjct: 798 GISRRAAQTTLFHIYTHVQGLLGPIVPLLIEETWEHTP-------GNIKGFLKHPFQRTF 850

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA-SLA 574
              D KW+   +   Y    ++   + +  + E AR+ K +GSSL++ V+L       L+
Sbjct: 851 KSPDSKWKNDTLEHEY--NAMVAANSAIKAMQETARSKKQMGSSLQSFVHLVLPRGFELS 908

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSG-EYLVEGK------DKV 627
            +L+           L   F++S V  + S  + ++ +I ++   Y  + K       K 
Sbjct: 909 EQLQS---------ELSDFFVVSSV-TIGSDCDPVLNDISHAEWSYCSDFKLPNDQIGKA 958

Query: 628 WIGVSRAEGSKCERCWNYS---TQVGSFVEHPTLCSRC 662
           W  V     +KC RCW Y+   T+ GS  +   LC RC
Sbjct: 959 W--VYTPSEAKCPRCWRYAVHPTETGS-EDREALCHRC 993


>gi|47212355|emb|CAF93909.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 933

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 190/331 (57%), Gaps = 26/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+F+R+GV ADW++ Y T    YEAAQ++VF +M  +G+IY+  KPV WSPSSRTALAEA
Sbjct: 136 AAFQRWGVMADWDHCYYTHHGVYEAAQLKVFQEMHGKGFIYQDHKPVFWSPSSRTALAEA 195

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSR+IYA F + + P + +  +   L ++ + VWTT PWT+PAN AV    K
Sbjct: 196 ELEYNPDHVSRAIYATFPLTTVPANIASEVG--LDNVSVLVWTTQPWTIPANQAVCYMPK 253

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            QY+VV+                       +      +++A++   +L +  GT+L    
Sbjct: 254 AQYSVVK-----------------------RTDSSQMLLIAAERTASLASLLGTELETVG 290

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  GS LE     HPV   +   ++  +++T   GTGLVHTAP HG +DY  +  + LP+
Sbjct: 291 TFTGSQLEGGICKHPVIPDKFVQLLPANHVTMAKGTGLVHTAPAHGMDDYSVASHFNLPV 350

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++GKFTE AG +   L V+ +G   V+  L +  +L+ EE   H YPYDWRTK+P
Sbjct: 351 ECMVDEDGKFTELAGPELHNLAVMTEGTDKVISMLKDCGALVNEERCVHSYPYDWRTKQP 410

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I R + QWF      +  A +A+ +V  +P
Sbjct: 411 VIIRPSRQWFIDTASLKDKAKEALKKVHILP 441


>gi|431902425|gb|ELK08925.1| Isoleucyl-tRNA synthetase, mitochondrial [Pteropus alecto]
          Length = 634

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 185/331 (55%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEA
Sbjct: 200 SAFIRWGIMADWNNSYYTFDGRYEAKQLRIFYQMFDKGLIYRSYKPVFWSPSSRTALAEA 259

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L+    P +   +WTT PWT+PAN AV     
Sbjct: 260 ELEYNPKHVSRSIYVKFPLLKPSPKLASLIEGSSP-VSFLIWTTQPWTIPANQAVCYMPD 318

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YA+V+  +                        +   I+A+D V  + +   T   +  
Sbjct: 319 AKYALVKCST-----------------------SEDLYILAADKVTPVASTLKTAFEVIS 355

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T +G+DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 356 TFSGADLENGTCTHPLTPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLST 415

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G F   AG +     VL +G  AV+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 416 DCLVDEDGVFKAAAGPELENKAVLEEGTDAVIKMLQAAKNLLKEEELLHSYPYDWRTKKP 475

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 476 VVIRASKQWFVNIADLKATAKELLKKVKFIP 506


>gi|375089436|ref|ZP_09735762.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
 gi|374566834|gb|EHR38068.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
          Length = 927

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 195/333 (58%), Gaps = 37/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A+FKR GV  DW++PYLTLDPEYEA Q+ VFG M+ +GYIY+G KP+ WS SS ++LAEA
Sbjct: 138 ATFKRLGVTGDWDHPYLTLDPEYEAQQLRVFGLMADKGYIYKGAKPIFWSWSSESSLAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S SIY  F++        G++ +   +    +WTTTPWT+PAN  ++V   
Sbjct: 198 EVEY-QDVTSPSIYVAFKVRDG----KGVVAD---NAEFIIWTTTPWTLPANLGISVKPD 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
            +Y  V +     GD                       I+A DL+ ++    G     ++
Sbjct: 250 AEYVQVAV-----GDR--------------------HFILAQDLLESVSQAIGWQDYQVE 284

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G   +     HP  +R+  +++ GD++T +SGTGLVHTAPGHG++DY   L+YGL 
Sbjct: 285 ATFRGDQFDRLTASHPFYDRESLLML-GDHVTLDSGTGLVHTAPGHGEDDYWIGLEYGLD 343

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVD  G +T++A    G+  L  G   +++ ++   SL+    + H YP+DWRTKKP
Sbjct: 344 ILSPVDSRGHYTDQAPGLEGVFYL-KGEKQILEMIEANGSLLHYSEFVHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 332
            I+RAT QWFAS++ FRQ  +D +   VKW  P
Sbjct: 403 VIYRATPQWFASIDRFRQELLDNVENSVKWHHP 435



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 175/339 (51%), Gaps = 46/339 (13%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD++RLWV+SVDY  DV +  ++L+Q+S+ YRK+R T+R++LG ++D+    + +  D 
Sbjct: 614 GADIIRLWVASVDYESDVRVSNEILKQVSESYRKIRNTIRFMLGLVNDFDPSQHQVDGDH 673

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L +IDQY          ++ + YESY++ ++++ +  F+  DLS FY DVAKD +Y    
Sbjct: 674 LALIDQYMHANFNQFKADMIQYYESYRYPELYKRLMNFVSTDLSAFYLDVAKDIVYIEAA 733

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA---YTLEDGSAAEFVFESK 514
            S  RRS QTV+   L  ++ ++ PIL H AE+ W++L        L+D    E +  S+
Sbjct: 734 DSPVRRSMQTVIYQILHDLLILVTPILVHTAEEAWKSLNGVDGFIQLQDMPDVEDLAGSQ 793

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKL--IGSSLEAKVYLF---TD 569
             V+D+ W+TF            ++R  +NK LE A+      I  S EA V L+    D
Sbjct: 794 -AVIDQ-WQTF-----------FKVRVGINKALEEAKNAPQDPIKKSFEASVILYLDADD 840

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQ--VEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            A+LA            AD L +   +SQ  VE L   P   +    Y            
Sbjct: 841 RAALAPF----------ADKLGQYLTVSQLKVEDLDQAPAEALDFETYQ----------- 879

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V  AEG+ C+RC     +VG   + P LC RCYE++
Sbjct: 880 -VQVHHAEGAICQRCRAVRPEVGRLDQAPDLCQRCYEIV 917


>gi|384500360|gb|EIE90851.1| hypothetical protein RO3G_15562 [Rhizopus delemar RA 99-880]
          Length = 942

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 214/404 (52%), Gaps = 49/404 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F  +G+  DW NPYLTL  ++E  Q+ V  +M  +GYIYR  KPV+WSPSS++ALAEAEL
Sbjct: 182 FMSWGIMGDWENPYLTLTKDFEMRQLVVLREMIKKGYIYRQLKPVYWSPSSKSALAEAEL 241

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E HVS S+Y  F     P       ++ +  L   +WTTTPWT+P+N A+ V+ +L 
Sbjct: 242 EYKENHVSTSLYVQF-----PIKVDCWKDKQVHAL---IWTTTPWTLPSNRAICVHPELD 293

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y +V+ Q+                            I+  D +  L+ +   +L +  T+
Sbjct: 294 YHLVQSQT------------------------GQHWIIGKDRLEALQEELDQRLTVLDTV 329

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS L    Y HP+   Q P V+ G ++T ESGT LVHTAPGHG EDY   L   +   S
Sbjct: 330 KGSALVGSSYQHPISKEQYP-VLAGKHVTAESGTALVHTAPGHGLEDYEVCLANNIQPFS 388

Query: 244 PVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            VD+EGKFT EAG +F G     +GN  V++ LD   S++ +  Y HKYPYDWRTK+P +
Sbjct: 389 WVDEEGKFTSEAGPQFEGKFAFREGNETVIELLD--ASIVKKSDYTHKYPYDWRTKQPVM 446

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQV 362
            RAT QWFA+VE  ++ A  +I  +  V  ++    G D    W    D    V + P+ 
Sbjct: 447 LRATAQWFANVEDLQKKAT-SINHIIQVLTEK----GTDA--WWEEEDDL---VFVAPEY 496

Query: 363 LRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL--PMIDQY 404
            RQ   IY++   T+     +   W +   +   DL  P+ D Y
Sbjct: 497 -RQDGKIYKRGYDTMDVWFDSGTSWTMLQGLFERDLSKPVADVY 539



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 154/270 (57%), Gaps = 12/270 (4%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 392
           ++ P YG+DVLRLWV++ DYT D+ IGP ++  +SD  RK+R T R+LLGNLHD+ + + 
Sbjct: 585 KKNPAYGSDVLRLWVANCDYTKDMTIGPSIIATISDHLRKIRTTARFLLGNLHDFDLKHY 644

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           + Y+ L  IDQY L +L     N+  + + Y F K  Q +Q F    LS+FYFDV KDRL
Sbjct: 645 VDYNHLQEIDQYMLHELYKYNHNVTTAMDDYSFNKAVQHVQNFTNNTLSSFYFDVIKDRL 704

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 512
           Y    ++ +RR  QTVL   L S    I+P + H AE++++N    Y     +    VF+
Sbjct: 705 YNESQSALSRRMAQTVLYEVLKSYTTSISPFVCHTAEEIYEN----YRQLTPAPQSSVFK 760

Query: 513 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
           + W   D+KW    + E   W  +L L++EVN+++E  R  K I +S E  V +  D+ +
Sbjct: 761 TGWLYSDDKWNNTVLNEK--WSMLLNLKSEVNQIIESIRQEKQIRTSQEVDVSIVLDNNT 818

Query: 573 -LASRLREMCTAKHDADTLQRIFIISQVEV 601
            LA  L+ +  ++     L  IF+ S V +
Sbjct: 819 RLAHALQSLQPSE-----LSDIFMTSHVYI 843


>gi|436842242|ref|YP_007326620.1| isoleucyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
 gi|432171148|emb|CCO24519.1| isoleucyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
          Length = 938

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/341 (41%), Positives = 192/341 (56%), Gaps = 46/341 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W NPYLT+ PEYEAA     G+    G + RGKKP+HW    RTALAEAE+
Sbjct: 141 FKRLGVMGNWENPYLTMKPEYEAATARELGRFMESGSVVRGKKPIHWCCDCRTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---------LAVWTTTPWTVPANA 114
           EY E H S SIY  F     P +   +L     D+          + +WTTTPWT+P N 
Sbjct: 201 EY-EDHTSPSIYVRF-----PLNDEKVLKALPEDVASKVDLSRTYVCIWTTTPWTIPDNM 254

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           AVAV+ +  Y V E+     GD                       I+A  L+P     +G
Sbjct: 255 AVAVHPEFDYCVAEVN----GD---------------------IYILAERLLPVCAETFG 289

Query: 175 -TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
             K  +  T+AG+ LE     HP  +R+ PVV+  DY+T +SGTG+VHTAPGHG+ED+ T
Sbjct: 290 WEKWNVLATVAGAKLEGAVAKHPFYDRESPVVL-ADYVTLDSGTGVVHTAPGHGREDFET 348

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
             +YGL + SP+++EG F ++   F+G+ V  D N  V++ L+E  +L+ ++   H YP+
Sbjct: 349 GNRYGLEVYSPMNNEGVFLKDVEFFAGMKVF-DANPKVIEKLEEVGNLLAKQNITHSYPH 407

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
            WR K+P IFRAT QWF S+E    R+ A+ AI   VKW+P
Sbjct: 408 CWRCKEPVIFRATTQWFISMEENDLRKKALKAIRDDVKWLP 448



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 191/349 (54%), Gaps = 34/349 (9%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           +IG V  + PQE    +GA++LR+WVS+V+Y  DV I  ++L +M D YR++R T RY+L
Sbjct: 616 SIGNV--IAPQEIIDQHGAEILRMWVSAVNYQEDVRISDEILSRMVDTYRRVRNTCRYIL 673

Query: 382 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
           GNL  +    ++++ D+L  ID +AL  ++   + I+++Y  ++F K++  +      +L
Sbjct: 674 GNLDGFNPEADAVAVDELLPIDHFALDLVKRQHEVIQKAYTDFEFHKVYHTLHNLCTTEL 733

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
           S+FY D+ KDRLY  G  S  RRS QT+L   +L +++ +APIL   AE+ + ++    +
Sbjct: 734 SSFYLDIIKDRLYVSGEKSLERRSAQTILWQTMLMLLKDMAPILSFTAEEAYSHM----S 789

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPV---GEIYFWGKILELRTEVNKVLEVARTGKLIG 557
            E    AE VF  +  +L+      PV    E   W  ++++R EV K +E  R  K+IG
Sbjct: 790 AEMKGDAETVFAFRPQLLE------PVISDDERSSWELLMDVRNEVTKAIEPLRREKVIG 843

Query: 558 SSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSG 617
            SL+ K+ LF D+  + +          +   L+  FI+S  E+ P +        P   
Sbjct: 844 HSLDTKITLFADETIIKAL---------ENVELREYFIVSGAEIKPLSEASDDAVKPEEL 894

Query: 618 EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           E L+       I V ++EG KC RCW Y T +G+  +HP LC RC  VL
Sbjct: 895 EGLL-------IKVEKSEGEKCSRCWRYDT-LGTNADHPELCPRCAAVL 935


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1.1|SYI_KOSOT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 186/330 (56%), Gaps = 41/330 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLT DP+YEA+ ++V  ++   G +YR  KP++W  S  TALAEAE+
Sbjct: 140 FKRLGVRGDWENPYLTFDPKYEASVLKVLSKLVKSGNVYRTLKPIYWCTSCETALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F+  + P       N F       +WTTTPWT+PAN A+A+N    
Sbjct: 200 EYHD-HKSYSIYVKFQDKNKP-------NRFF-----VIWTTTPWTLPANVAIALNPNFD 246

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  V+++                         +++I+    L   ++A       I  T 
Sbjct: 247 YCEVKVKD------------------------EIWILAEGLLEQAMKAMGIESYEIISTK 282

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+ E     HP  NR   V++  DY+  ++GTG VHTAPGHG+EDY T L+Y LP++S
Sbjct: 283 KGSEFEGEVAQHPFMNRDS-VIVMADYVALDAGTGCVHTAPGHGEEDYGTGLRYRLPVIS 341

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PV+D+G FT+EAGK++GL V  D N  +V+ L +   L+ E   EH YP+ WR K P IF
Sbjct: 342 PVNDQGIFTKEAGKYAGLFVF-DANPIIVEDLRKSGHLVGEGKIEHSYPHCWRCKNPVIF 400

Query: 304 RATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           RATEQWF  V+    RQ A+  I + +W P
Sbjct: 401 RATEQWFIDVDKNDLRQKALSEIEKTEWHP 430



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 202/338 (59%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           V PQE    YGA++LRLWV+S +Y  D+ I   +++Q  + Y+K+R TLRYLLGNL D+ 
Sbjct: 601 VDPQEINNKYGAEILRLWVASSNYQEDIRISMNIIQQQIENYKKIRNTLRYLLGNLSDYS 660

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +S+ Y++L  +D++A+ +L  +++++   Y+ Y+F+K+FQ I +FII D+S FY D+ 
Sbjct: 661 PQDSVPYEELLELDKWAIMKLHKLIRDVTRYYDRYEFYKVFQSILKFIITDMSAFYLDII 720

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY  G TS  RRS QTVL   L+++ +++APIL   +E+V+ +LP     E     +
Sbjct: 721 KDRLYVEGKTSPERRSAQTVLFEILVALNKMLAPILTFTSEEVYAHLP-----EAARNYK 775

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            +    WP   E++    + E   W K++ LR +V K LE+AR  KLIG+SL+AKV L  
Sbjct: 776 TIQVENWPEYKEEYIDSSLEE--RWEKLINLREDVLKALEIARAEKLIGNSLDAKVTL-- 831

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
               + S+  +    ++  + +  +FI+SQVE   S          ++GEY V       
Sbjct: 832 ---QIRSKDIDEIVRQYSREFIADLFIVSQVEFAESVEG-------FNGEYAV------- 874

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V RAEG KC+RCW YS + G+  E P +C RC  VL
Sbjct: 875 VKVDRAEGEKCQRCWKYSIETGADPELPDMCPRCVAVL 912


>gi|238855265|ref|ZP_04645584.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664624|ref|ZP_05865476.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|313471916|ref|ZP_07812408.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832157|gb|EEQ24475.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529158|gb|EEQ68159.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561689|gb|EEX27661.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
          Length = 930

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/332 (39%), Positives = 193/332 (58%), Gaps = 34/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GV ADW++PY+TL P++EA +I VFG+M  +GYIY+G KPV+WSPSS + LAEA
Sbjct: 137 TDFKRLGVMADWDHPYITLQPKFEAEEIRVFGKMFEKGYIYKGLKPVYWSPSSESTLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +IY  F++        G+L+    D  + +WTTTPWT+P N  + VN K
Sbjct: 197 EVEYHDVK-SPAIYVAFQVEDG----KGILDN---DTYMVIWTTTPWTIPVNVGITVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIK 180
            +Y+V+++                        + + F+I  S L    E  +W    V+ 
Sbjct: 249 FEYSVIKVAG----------------------EDRKFVIGTSQLEKVAEDLEWKDYEVV- 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G+D +     HP+ ++   +V+   Y+T E GTGLVH A G G++DY    KYGLP
Sbjct: 286 DTFKGTDFDRMTVKHPLYDK-TSLVMNDTYVTAEDGTGLVHNATGFGEDDYNVGKKYGLP 344

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           + SP+DD+G++T++    + + V   D N  + K L+E+ +L+    + H YP+DWRTKK
Sbjct: 345 VYSPMDDQGRYTKDIPDPNLVGVFYDDANKMITKQLEEKKALLKLSFFTHSYPHDWRTKK 404

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 405 PVIYRATTQWFASVDAFRDQILAEIEKANFTP 436



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/333 (34%), Positives = 177/333 (53%), Gaps = 37/333 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 616 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKTNRVAYSD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  IDQY    L  +VK+   +Y+ Y F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 676 LRSIDQYMEVLLNKLVKDCLAAYDRYDFTSVYKMVFKFISNELSAFYLDFAKDVLYIEGE 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RR+ QTV+   L+ + +++ PILPH  E+ W      Y  ED    ++V  S  P 
Sbjct: 736 DSLPRRAMQTVIYDALVKLTKIMTPILPHTMEEAW-----GYLKED---EDYVQLSDMPE 787

Query: 518 LDEKWRTF--PVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           ++    TF      +  W + ++ R +V K LE AR  KLIG S EA V ++   A   +
Sbjct: 788 VE----TFDNEAELVENWTEFMKFRDDVLKALEEARNDKLIGKSFEACVDVYP-TAETKA 842

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD--KVWIGVSR 633
              ++ T       +++I I+S++ +L              GE   + KD     + V R
Sbjct: 843 VFDKLNT------DMRQILIVSKLNIL-------------DGEAPADAKDFETAKLVVKR 883

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC      VG+  + PTLC RC E++
Sbjct: 884 AEGEVCQRCRMTRNDVGADAQLPTLCGRCAEIV 916


>gi|339445028|ref|YP_004711032.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
 gi|338904780|dbj|BAK44631.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
          Length = 950

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/352 (39%), Positives = 203/352 (57%), Gaps = 44/352 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLT  P YEA  +EVF +M L G +YRG+KP+HW     TALAEAE+
Sbjct: 143 FKRLGVNGDWEHPYLTFTPNYEAGNVEVFKKMYLDGSVYRGRKPIHWCKRCHTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SI+  F++ + P    T+G+      D  + +WTTTPWT+PAN AV++   
Sbjct: 203 EYSD-ETSPSIFVKFKLDTVPGMFETAGVTG----DAYILIWTTTPWTLPANTAVSLAPD 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVI 179
             Y +V+         A  +N                +I+A +LV  +   A W    ++
Sbjct: 258 ADYVMVQ---------ADGSN----------------MIMARELVEQVAEIAGWEDWSLV 292

Query: 180 KK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           ++      +L G +L    Y  PV       +I GD++T ++GTG VHTAPGHGQ+DY+ 
Sbjct: 293 EEATGTLVSLKGRELTGLTYTCPVRQDLKGTIIYGDHVTLDTGTGCVHTAPGHGQDDYLV 352

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +L++ +P+L PVDD G FT+EAG FSGLDV  + N  ++ +L E+ +L+ E+   H YP+
Sbjct: 353 ALEFDVPLLMPVDDNGCFTDEAGPFSGLDV-DEANPVIINWLRERGTLVAEKSILHSYPH 411

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVPPQEAPGYGADV 342
            WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P   A   G+ V
Sbjct: 412 CWRCHEPVIFRATDQWFVSMDKNSLREDALSAIENDVEWIPAWAANRIGSMV 463



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 39/337 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI--SYD 396
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+     +   +D
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDATDMVEDFD 694

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +DQ+ L +L +++ ++  +Y  Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ELEPMDQWMLVRLSHLLADVEAAYNDYKFHLVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A    +G        + WP
Sbjct: 755 PDSPRRRAVQTVLMDILEVLVRVLAPVLSFTTDEVWEHYPQAIREREGRPTNVQL-AGWP 813

Query: 517 VLDEKWRTFP-------VGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
            L +   T P       V E +  G +L +R  V K LE AR  K +  S EA V +   
Sbjct: 814 TLRDFVPTLPERAVADKVAEDF--GVVLGVREVVTKALEDARAEKTVNKSQEAAVVV--- 868

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
               A R     T K D +  + +FI++ V                      E  D++ +
Sbjct: 869 ---CAPRSVLEVTEKFDQEVFEELFIVASV--------------------AFEEADELAV 905

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +  A G KC RCWNY  ++G    HP +C RC +VL
Sbjct: 906 SIEPAAGEKCPRCWNYR-ELGGNANHPDVCERCGDVL 941


>gi|227509388|ref|ZP_03939437.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191100|gb|EEI71167.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 942

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 199/333 (59%), Gaps = 33/333 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+GKKPV+WS SS +ALAE
Sbjct: 143 MDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAE 202

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +     + Y   +++       G+L +   +  + VWTTTPWT+PA+  + V+A
Sbjct: 203 AEVEYHDVTSPSAFYGE-KVIDG----KGVLED--DNTFMVVWTTTPWTIPASEGITVDA 255

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-I 179
              YAVV+ +                      D++K   ++AS+L+   E  +G K V I
Sbjct: 256 DFDYAVVQPED---------------------DERK--FVIASELLEKDEGLFGWKNVKI 292

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTAPG+G++D+    KYGL
Sbjct: 293 VKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTAPGYGEDDFNIGRKYGL 352

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
            I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+   P  H YP+DWRTK
Sbjct: 353 DIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLLDYMPLNHSYPFDWRTK 411

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 412 KPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 30/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYTLEDGSAAEFVFESKW 515
               RRS QTV+   + ++ +++ P+LPH AE++W  L  P  +           F+++ 
Sbjct: 744 DGHKRRSMQTVMYHAVTTLTKLMTPVLPHTAEEIWGFLKEPEDFVQLTDIPKPQHFDNEA 803

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +L+E            W K +  R +V KVLE AR  K IG + EA + ++    +   
Sbjct: 804 DILEE------------WTKFMTYRDDVLKVLEEARDAKEIGKASEASLTIYA--TTEVK 849

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E          L  + ++SQ+ V   T      + P +        D + + V  A+
Sbjct: 850 DLFESLNVD-----LATVLLVSQLTVKDFT------DAPDNATKF--DSDGLALLVEPAK 896

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G  CERC    T VGS  ++PT C  C E++
Sbjct: 897 GKTCERCRLVRTDVGSDSDYPTFCHSCAEIV 927


>gi|242780148|ref|XP_002479535.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218719682|gb|EED19101.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1414

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 194/336 (57%), Gaps = 25/336 (7%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +G+ ADW   + TLD  +E  Q+ +F +M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 520 MRVFRGFGIMADWEGHWKTLDKGFEMKQLGIFREMVEKGLIYRRFKPVYWSPSTGTALAE 579

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + H+S +    F +   P          +  L   +WTTTPWT+PANAA+AV+ 
Sbjct: 580 AELEYNDNHISTAALVRFPLAKLPEQIRDKPLVDVTSLSAVIWTTTPWTLPANAAIAVHE 639

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L Y +V  QS   G      ++     ++LK++ +V       LVP+++   G++L  K
Sbjct: 640 SLNYLIV--QSSNHGQLLIAESRLGYFQDMLKEELQV-------LVPSIQ---GSELCQK 687

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T         R + P D  +   +I  D++T +SG+GLVH APGHG +DY   L  G+ 
Sbjct: 688 TTY--------RPLFPRDGVEEQPIIAADFVTADSGSGLVHCAPGHGMDDYEVCLAQGIQ 739

Query: 241 ILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
             +PV DEG FT+EA        SG  VL +GN  V++Y++    L+ +  YEHKYPYDW
Sbjct: 740 AFAPVTDEGCFTDEAMPRDPSFLSGKSVLDEGNTLVLQYVESMSQLLCQHKYEHKYPYDW 799

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           R+K+P I RATEQWFA V   R++A+ ++  V +VP
Sbjct: 800 RSKRPIIIRATEQWFADVANIRESALASLEDVTFVP 835



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 30/334 (8%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
            G D LRLWV+S DYT DV+IG QVL+ ++    K R T + LLG L D+    N   Y+D
Sbjct: 1052 GPDALRLWVASSDYTRDVVIGQQVLQTINTSLHKYRVTFKLLLGALGDFDPSVNLRQYED 1111

Query: 398  LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
            L  ID+ AL QL  +V   R +++S++F+K    + R+   + S FY +  KDRLYT   
Sbjct: 1112 LHKIDRLALMQLTRLVDTCRNAFDSFEFYKAVNALNRWANHEFSAFYMETLKDRLYTEAE 1171

Query: 458  TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               +RR+ QT L      +  ++API P L E+ W++          ++     + K P 
Sbjct: 1172 DGASRRAAQTTLFHIYTYLQELLAPITPLLVEESWEH----------TSERVKAQLKHP- 1220

Query: 518  LDEKWRTFPVGEI-----YFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
            L    R  P   +     + +  ++     V  + E AR+ K +GSSL++ VY    D S
Sbjct: 1221 LQRISRAAPAEWVDETTSHDFVDLMAANAAVKIIQESARSKKQMGSSLQSFVYFELRDES 1280

Query: 573  LASRLREMCTAKHDADTLQRIFIISQVE--VLPSTPNGLIRNI--PYSGEY-LVEGKDKV 627
            L +  R +         L  +F++S V   V  S   G I +    Y+ E+ L   K K 
Sbjct: 1281 LGTFQRYISE-------LPDLFVVSSVSLGVKGSDLPGEIASAKWSYTQEFELPNSKQKA 1333

Query: 628  WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSR 661
             + V     +KC RCW Y+    +  E P LC R
Sbjct: 1334 TVHVYAPTQAKCPRCWRYAAP-EAVAEEPPLCER 1366


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/352 (41%), Positives = 197/352 (55%), Gaps = 40/352 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV+  W  PY T+   YEA  +  F + + +G++YRGKKPV+W  + RTALAEAE
Sbjct: 142 SFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYRGKKPVYWCITDRTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVA 117
           +EY E H S SIY  F +VSA P          P L      L +WTTTPWT+PAN AVA
Sbjct: 202 VEY-EQHRSPSIYVAFDLVSALPD---------PKLAGRPARLVIWTTTPWTLPANLAVA 251

Query: 118 VNAKLQYAVVEIQS---LLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
            +    Y   ++     ++  D  A       PG +      V  + A    P  EA  G
Sbjct: 252 AHPDFTYVAYDLNGQVVVVAKDLLAAFLADVAPGEL-----SVSDVPAPHSPPAHEAATG 306

Query: 175 TKLVI--------KKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 223
               +        ++ LA   GS LE  RY HP  +R+  V++G D++T E+GTGLVHTA
Sbjct: 307 GGGTVLAPQLAHPERVLAHLDGSALEGLRYRHPFLDRESQVILG-DHVTLEAGTGLVHTA 365

Query: 224 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 283
           PGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++G  +  + N  +V  L     L+ 
Sbjct: 366 PGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYAGKKIF-EANPEIVADLHASGHLLS 424

Query: 284 E--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           +     EH YP+ WR   P +FRAT+QWF S+E    R+A +  I +V+W+P
Sbjct: 425 DPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIP 476



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 170/329 (51%), Gaps = 44/329 (13%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RRS QT L A    ++R++APIL   A + W  LP       G   E V+ +  P
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLP-------GRPTESVWLAGLP 826

Query: 517 VLDEKWRTFPVGEIYF---WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
                 R  P         +GK+ E+R  V   LE AR  KLIGS LEA V +  +    
Sbjct: 827 R-----RARPADADALEARYGKLFEVRGVVQSKLEEARRAKLIGSGLEAMVTVRAEGEQ- 880

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             RL E   A+     L  +FI+S+V         ++ + P S E            V+R
Sbjct: 881 -RRLLEEARAE-----LPTLFIVSKV---------VLADGPLSAE------------VAR 913

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           A G KCERCW Y+  VG    HPTLC++C
Sbjct: 914 APGVKCERCWIYAEDVGRDAAHPTLCAKC 942


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/352 (41%), Positives = 197/352 (55%), Gaps = 40/352 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV+  W  PY T+   YEA  +  F + + +G++YRGKKPV+W  + RTALAEAE
Sbjct: 142 SFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYRGKKPVYWCITDRTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVA 117
           +EY E H S SIY  F +VSA P          P L      L +WTTTPWT+PAN AVA
Sbjct: 202 VEY-EQHRSPSIYVAFDLVSALPD---------PKLAGRPARLVIWTTTPWTLPANLAVA 251

Query: 118 VNAKLQYAVVEIQS---LLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
            +    Y   ++     ++  D  A       PG +      V  + A    P  EA  G
Sbjct: 252 AHPDFTYVAYDLNGQVVVVAKDLLAAFLADVAPGEL-----SVSDVPAPHSPPAHEASTG 306

Query: 175 TKLVI--------KKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 223
               +        ++ LA   GS LE  RY HP  +R+  V++G D++T E+GTGLVHTA
Sbjct: 307 GGGTVLAPQLAHPERVLAHLDGSALEGLRYRHPFLDRESQVILG-DHVTLEAGTGLVHTA 365

Query: 224 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 283
           PGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++G  +  + N  +V  L     L+ 
Sbjct: 366 PGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYAGKKIF-EANPEIVADLHASGHLLS 424

Query: 284 E--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           +     EH YP+ WR   P +FRAT+QWF S+E    R+A +  I +V+W+P
Sbjct: 425 DPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIP 476



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 169/329 (51%), Gaps = 44/329 (13%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RRS QT L A    ++R++APIL   A + W  LP       G   E V+ +  P
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLP-------GRPTESVWLAGLP 826

Query: 517 VLDEKWRTFPVGEIYF---WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
                 R  P         +GK+ E+R  V   LE AR  KLIGS LEA V +  +    
Sbjct: 827 R-----RARPADADALEARYGKLFEVRGVVQSKLEEARRAKLIGSGLEAMVTVRAEGEQ- 880

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             RL E   A+     L  +FI+S+V         ++ + P S E            V+R
Sbjct: 881 -RRLLEEARAE-----LPTLFIVSKV---------VLADGPLSAE------------VAR 913

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           A G KCERCW Y+  VG    HPTLC +C
Sbjct: 914 APGVKCERCWIYAEDVGRDPAHPTLCGKC 942


>gi|293400858|ref|ZP_06645003.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305884|gb|EFE47128.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 908

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 191/331 (57%), Gaps = 35/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F   GV  D+++PY+TL  E+EA QIE+FG+M++ G IY+G KPV+WSPSS TALAEA
Sbjct: 137 AGFLSLGVVGDYDHPYITLTKEFEAHQIEIFGKMAMNGLIYKGLKPVYWSPSSETALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +I+  F +        G+L+    D    +WTTTPWT+PAN A+ +N  
Sbjct: 197 EIEYKDVK-SPTIFVKFPVKDG----KGILDS---DTSFVIWTTTPWTIPANLAICLNKD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             YA+V                         + +K  +IV  +LV  L  K+G +   + 
Sbjct: 249 YTYALV-------------------------NSEKGKLIVLEELVDALWEKFGLQEKQLL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GS+LE     HP+ +R+  +++G D++T ++GTG VHTAPG G +D+    KYGLP
Sbjct: 284 KTFKGSELEMITCQHPLYDRESLIILG-DHVTADAGTGCVHTAPGFGADDFFVGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
               VD+ G    +AG++     + D N  V + LDE  +L+  E   H YP+DWRTKKP
Sbjct: 343 AYCNVDEHGCMMSDAGEWLAGQYVDDANKTVTQKLDEIGALLKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++  R   ++ I  V W+P
Sbjct: 403 IIFRATTQWFASIDKIRDQLLEEIDNVDWIP 433



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL---HDW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R+LL N+   +D+
Sbjct: 604 PGEITKKYGADILRLWAASVDYQADCSMSDEILKQISENYRKVRNTFRFLLANIDGENDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +  + LP +D+Y L  L ++ + ++++Y  Y+F  +  ++   +  + S +Y D 
Sbjct: 664 TKADLVDVNTLPALDKYMLIMLADVCEKVKKAYGEYRFADVTSMLTNLMTNEFSAYYLDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     S  RR  QTVL   + ++VR+ APIL H AE+V     F +T E     
Sbjct: 724 TKDILYIEKKDSNRRRQVQTVLYYAVDTLVRLWAPILTHTAEEV---NDFFHTEE----- 775

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E +    +PV+        + E     +++ +R +V K LE AR  K+IG SLEA V + 
Sbjct: 776 ESIHLGAFPVVPVFENADEIKEKV--ARLMLIRADVFKALEEARAEKIIGKSLEAHVIIN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            +D   A  + E C  K       +  I+S+V               +S + L +  +  
Sbjct: 834 VNDEDRA-LIEEYCGNK-----FNQWLIVSRVS--------------FSVDEL-KAYEVC 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I V + EG  C RCWN +           LC RC  VL
Sbjct: 873 QIAVEKCEGKVCPRCWNITESNAE----DGLCQRCAAVL 907


>gi|373451746|ref|ZP_09543665.1| isoleucine-tRNA ligase [Eubacterium sp. 3_1_31]
 gi|371967967|gb|EHO85434.1| isoleucine-tRNA ligase [Eubacterium sp. 3_1_31]
          Length = 908

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 191/331 (57%), Gaps = 35/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F   GV  D+++PY+TL  E+EA QIE+FG+M++ G IY+G KPV+WSPSS TALAEA
Sbjct: 137 AGFLSLGVVGDYDHPYITLTKEFEAHQIEIFGKMAMNGLIYKGLKPVYWSPSSETALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +I+  F +        G+L+    D    +WTTTPWT+PAN A+ +N  
Sbjct: 197 EIEYKDVK-SPTIFVKFPVKDG----KGILD---TDTSFVIWTTTPWTIPANLAICLNKD 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
             YA+V                         + +K  +IV  +LV  L  K+G +   + 
Sbjct: 249 YTYALV-------------------------NSEKGKLIVLEELVDALWEKFGLQEKQLL 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT  GS+LE     HP+ +R+  +++G D++T ++GTG VHTAPG G +D+    KYGLP
Sbjct: 284 KTFKGSELEMITCQHPLYDRESLIILG-DHVTADAGTGCVHTAPGFGADDFFVGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
               VD+ G    +AG++     + D N  V + LDE  +L+  E   H YP+DWRTKKP
Sbjct: 343 AYCNVDEHGCMMSDAGEWLAGQYVDDANKTVTQKLDEIGALLKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++  R   ++ I  V W+P
Sbjct: 403 IIFRATTQWFASIDKIRDQLLEEIDNVDWIP 433



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL---HDW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R+LL N+   +D+
Sbjct: 604 PGEITKKYGADILRLWAASVDYQADCSMSDEILKQISENYRKVRNTFRFLLANIDGENDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +  + LP +D+Y L  L ++ + ++++Y  Y+F  +  ++   +  + S +Y D 
Sbjct: 664 TKADLVDVNTLPALDKYMLIMLADVCEKVKKAYGEYRFADVTSMLTNLMTNEFSAYYLDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     S  RR  QTVL   + ++VR+ APIL H AE+V     F +T E     
Sbjct: 724 TKDILYIEKKDSNRRRQVQTVLYYAVDTLVRLWAPILTHTAEEV---NDFFHTEE----- 775

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E +    +PV+        + E     +++ +R +V K LE AR  K+IG SLEA V + 
Sbjct: 776 ESIHLGAFPVVPIFENADEIKEKV--ARLMLIRADVFKALEEARAEKIIGKSLEAHVMIN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
            +D   A  + E C  K       +  I+S+V               +S + L +  +  
Sbjct: 834 VNDEDRA-LIEEYCGNK-----FNQWLIVSRV--------------SFSVDEL-KAYEVC 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            I V + EG  C RCWN +           LC RC  VL
Sbjct: 873 QIAVEKCEGKVCPRCWNITESNAE----DGLCERCAAVL 907


>gi|116492940|ref|YP_804675.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265596|sp|Q03EY9.1|SYI_PEDPA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116103090|gb|ABJ68233.1| Isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 933

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 194/332 (58%), Gaps = 34/332 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR G+ A+W++PYLTL+PE+EA +I  FG+M+  G IYRGKKPV WS SS +A+AEA
Sbjct: 137 TDFKRLGISAEWDHPYLTLNPEFEAQEIRTFGRMAELGLIYRGKKPVFWSWSSESAMAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +     + YA            G+L+E   +    VWTTTPWT+PA+  + ++A 
Sbjct: 197 EVEYHDVTSPSAFYA-----EKVNDGKGVLDE---NTYFVVWTTTPWTIPASEGITIDAG 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
             Y+VV+           PA +  +             ++A+D +     ++G + V   
Sbjct: 249 FDYSVVQ-----------PAGEDRK------------FVIATDRLNYAAEQFGWEDVQTL 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           + + G +L+  + +HP DN +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL 
Sbjct: 286 QVIRGRELDRIKAIHPFDNDRELVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLD 345

Query: 241 ILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I  PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKK
Sbjct: 346 IFVPVDDRGYMTAEAGPDFEGV-FYEDANAIALDKLKASNALLKQMDYVHSYPFDWRTKK 404

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFASV+  R   ++AI  V+++P
Sbjct: 405 PIIFRATPQWFASVDKIRDQILEAIEDVEFLP 436



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 178/343 (51%), Gaps = 35/343 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWVSS+D + DV +  +   + S+ Y+K+R T+RYLL N  D+  
Sbjct: 607 VPDEINKKMGAEIIRLWVSSIDSSSDVRVSQENFVKASESYKKIRNTVRYLLANTSDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N + Y++L   D+Y L Q   ++  IR SY++Y F  I++ +  +II DLS FY D A
Sbjct: 667 KENGVDYNELRPEDRYMLVQFNELISKIRTSYDNYDFIDIYKTLLNYIITDLSAFYLDFA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + ++I PILPH AE++W+ L            E
Sbjct: 727 KDVVYIEPENSLKRRSMQTVFYKILVGLTKLITPILPHTAEEIWEYLR--------EPEE 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           FV  ++ P +     T     +  W  I ELR+ V K LE AR  K+IG S+EAK  L+ 
Sbjct: 779 FVQLAEMPEVAN--YTDGADLLSKWQSIKELRSHVLKALEEARDSKMIGKSMEAKATLYL 836

Query: 569 DDASLASRLREMCTAKHDADT----LQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
           D+++           K   DT    L+ I I+SQ+EV        +   P          
Sbjct: 837 DEST-----------KQLVDTLGVDLRLILIVSQLEV------KALSEAPKDAAIF---D 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           D++ + ++ A+G  CERC    T VGS     TLC+ C +++ 
Sbjct: 877 DQLAVEITPAQGEVCERCRMTKTDVGSDEHFATLCASCAQIVT 919


>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 932

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/340 (41%), Positives = 194/340 (57%), Gaps = 31/340 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 615 VPKDIIEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 674

Query: 390 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            N  + Y+++  ID++AL +LE + +   E Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 675 ENKKVDYEEMYEIDKWALHKLEELKEKTTEYYDKYEFYSLFQEITYFCSIDMSAFYLDIV 734

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RRS QTVL+  L  +VRVI+P+L   AE++W+ +P     E     E
Sbjct: 735 KDRLYCEEKDSIERRSAQTVLTEVLKVLVRVISPVLSFTAEEIWERIP-----ESLKKEE 789

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-- 566
            V  S+W  L+ K++   + +   W KI  LR EVNK LE AR   LIG SL+A+V L  
Sbjct: 790 SVHLSEWVELEPKYKNNELAKK--WDKIQNLRKEVNKKLEAARQEGLIGHSLDARVLLNV 847

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
             DD S      E        D +  +FI+SQ + +    N  +     SG         
Sbjct: 848 NNDDYSFLKDYTE--------DEVSDLFIVSQTKFV----NDELGASEISG--------- 886

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + IGV +A G KCERCW Y  +VG+  EHP +C RC +VL
Sbjct: 887 ISIGVIKALGKKCERCWKYHEEVGNDPEHPDVCPRCAKVL 926



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 195/333 (58%), Gaps = 37/333 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R G+  +W++PY+TL PEYEA Q++VF ++   GY+Y+G KPV+WSP++ TALAEA
Sbjct: 145 AEFIRLGILGNWDDPYITLKPEYEAEQLKVFKEIYENGYVYKGLKPVYWSPTTETALAEA 204

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWTTTPWTVPANAAVAVNA 120
           E+EY +  VS SIY          ++  LL++   D   + +WTTTPWT+PAN  +A+N 
Sbjct: 205 EIEYKDV-VSPSIYVKME------ASKDLLDKLGTDEASIVIWTTTPWTLPANLGIALNK 257

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
              Y +                 K+  GN         +++A +L      +      + 
Sbjct: 258 DFDYGLY----------------KTEKGN---------LVLAKELAEKAFGEMKLSYELI 292

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   G+ LE   Y HP  +R+  +VI G+++T ++GTG VHTAPGHG +DYV    YG+ 
Sbjct: 293 KEFKGNKLERTHYKHPFLDREG-LVILGEHVTLDAGTGAVHTAPGHGVDDYVVGQAYGIG 351

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           ILSPVDD+G  T+EAGK+ GL      +  +V+ ++    L+    + H YP+DWR+KKP
Sbjct: 352 ILSPVDDQGHMTKEAGKYEGL-FYKKASKVIVEDIEASGHLMAYSEFTHSYPHDWRSKKP 410

Query: 301 TIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            I+RATEQWF SV+    RQ A+ A+  V++VP
Sbjct: 411 VIYRATEQWFISVDESDVRQNALKALEDVEFVP 443


>gi|327357633|gb|EGE86490.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1021

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 197/338 (58%), Gaps = 35/338 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+++ V ADW   + T+D  +E  Q++VF +M  +G IYR  KPV+WSPSSRTALAEAEL
Sbjct: 154 FQKWAVMADWEGVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAEL 213

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H+S +    F +VS P     +L     ++   +WTTTPWT+PANAA+AV+  L 
Sbjct: 214 EYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLD 273

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VV  +S   G     ++++    ++L+D +    ++ S ++       G++LV K T 
Sbjct: 274 YSVV--KSERHGYLVIGSSRREYIQSLLQDDE--ITVIGSPIL-------GSELVSKATY 322

Query: 184 A-----GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
                 GSD +               VI  D++T +SG+GLVH APGHG EDY     +G
Sbjct: 323 RPLFKDGSDPQR--------------VIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHG 368

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +   +PVDD G FTE A        SG  VL +GN  V++Y++ +  L+ +  YEHKYPY
Sbjct: 369 ITFHTPVDDGGLFTEAAMPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPY 428

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K P I RATEQWFA V   R  A+ A+  V++VP
Sbjct: 429 DWRSKLPVIVRATEQWFADVGDIRDNAIRALEDVQFVP 466



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 168/337 (49%), Gaps = 25/337 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++IG  VL+ ++    K R T + LLG+L D+    ++ ++ L
Sbjct: 682  GVDALRLWVASSDYTKDIVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRAVPHESL 741

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL N+V   +++Y S++F+K+   I ++  ++ S FY +  KDRLY     
Sbjct: 742  RIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRLYADSPD 801

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            S +RR+ QT L         ++AP++P L E+ W++ P     +     + V     P  
Sbjct: 802  SLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTPETIKTKFAPPLQRVMTKPSPEW 861

Query: 519  --DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              D+   +FP+        ++ + T V  + E AR  K +GSSL++ +++    ++  + 
Sbjct: 862  QNDKLEESFPL--------LMAINTAVKTMQENARNKKEMGSSLQSFIHISVPCSATQAP 913

Query: 577  LREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEG---KDKVWI 629
            + E        D LQ +F++S V V        P        Y+  +   G   + +VWI
Sbjct: 914  IFEQF-----GDELQDLFVVSSVTVGYNDAAPPPEIEYAEWKYNSNFEFPGSSQRGRVWI 968

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +A   KC RCW Y   +    + P LC RC + +
Sbjct: 969  YTPQA--IKCGRCWRYQVPLEPKQDDP-LCQRCVDAM 1002


>gi|241895683|ref|ZP_04782979.1| isoleucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871050|gb|EER74801.1| isoleucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 932

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/333 (42%), Positives = 193/333 (57%), Gaps = 35/333 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW++PYLTL P +EAAQ+ VFG M+ +  I+RGKKPV WS SS +ALA 
Sbjct: 138 MADFKRLGVSADWDHPYLTLQPSFEAAQLRVFGSMAKRDLIFRGKKPVFWSWSSESALAM 197

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S S +   ++        G+L++   D  L  WTTTPWTVPA+ A+AV+ 
Sbjct: 198 AEIEYHDV-TSESAFISEKIKDG----KGVLDQ---DTYLVAWTTTPWTVPASQALAVHP 249

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
             +Y  V+                  P N  K       +VA  L+ +L  K+G  +  I
Sbjct: 250 DFKYVQVQ------------------PQNTTKK-----YLVAESLLSSLSEKFGWEEPTI 286

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
             T  G DLE     HP  +R   VV+  DY+T ++GTGLVHTAPG G++D++T  +YG+
Sbjct: 287 LATFEGKDLEYMVTEHPYMDRDILVVL-ADYVTDDTGTGLVHTAPGFGEDDFMTGKRYGI 345

Query: 240 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
             +  VDD G  T EAG+ F G+    D N   ++ L +  +L+  EP  H YP+DWRTK
Sbjct: 346 TPIMNVDDRGYLTAEAGEDFDGV-FYEDANELSLQKLRDVDALVKSEPITHSYPFDWRTK 404

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRA  QWFAS+  FRQ  +DA+  V + P
Sbjct: 405 KPVIFRAVPQWFASINSFRQEILDALDDVTFKP 437



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 181/357 (50%), Gaps = 30/357 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +++G  +    +IG    + P E     GA+++RLWVS+VD + DV +   +L Q S+IY
Sbjct: 591 TLDGNGEKMSKSIGNT--IEPNEVIKQMGAEIIRLWVSTVDTSADVRVSMDILSQTSEIY 648

Query: 371 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           RK+R T+R+LL N  D+    ++++Y+DL  +D+Y   +   ++  ++ +Y++Y F  + 
Sbjct: 649 RKIRNTMRFLLANTADFNPNEDTVAYEDLTEVDKYFYARFNQLISELKAAYDAYDFQSVH 708

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           +++  FI VDLS FY D AKD LY        RRS QTVL   ++ + +++ PILPH AE
Sbjct: 709 KLLINFINVDLSAFYLDFAKDILYVEAPNGHLRRSLQTVLYKIVVGLDKLMLPILPHTAE 768

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           ++++ LP  Y  ED     F + +  P +++      +     W   ++LR   NK LE 
Sbjct: 769 EIFEYLP--YETED-----FAYLTNMPEVEDLGDNTEL--FANWSSFMKLRDAANKALEE 819

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  KLIG   EA + L+     L     +M  A      ++ + ++SQ+ +   T    
Sbjct: 820 ARNAKLIGKPAEAALTLY-----LTKEQAQMVDAL--GQDIRVLLLVSQLHLADVT---- 868

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                      VE  D   I V+ A G    R   Y T +GS  + P L +   E++
Sbjct: 869 ------DASADVENYDGYKIEVAHAVGEVSPRDRMYHTDLGSDKDFPMLSAHEAEIV 919


>gi|406868752|gb|EKD21789.1| isoleucyl-tRNA synthetase [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 982

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/346 (41%), Positives = 202/346 (58%), Gaps = 48/346 (13%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV  DW N + T+DP +E  Q+EVF  M+ +G I+R  KPV+WSPSSRTALAE
Sbjct: 158 MKGFQEWGVMGDWENAWKTMDPAFEIKQLEVFRDMAKKGLIFRRYKPVYWSPSSRTALAE 217

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP---DLGLAVWTTTPWTVPANAAVA 117
           AELEY E HVS + Y  F ++S P     +  E LP   ++   VWTTTPWT+PAN A+A
Sbjct: 218 AELEYKEDHVSTAAYVKFPLMSVP----DVARETLPEGTEVSAVVWTTTPWTLPANRAIA 273

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT----LEAKW 173
           V A+++Y++V                +SR G+VL        +VAS  +P     L ++ 
Sbjct: 274 VGAEMEYSLV----------------RSR-GDVL--------LVASTRLPNIASVLSSES 308

Query: 174 GTKLVIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 230
             +LV+   L G DLE+C Y +PV   D    P+V   D+++ ESG+GLVH APGHG +D
Sbjct: 309 PLELVLDGIL-GKDLESCSYTNPVRGNDGGSQPIVC-ADFVSAESGSGLVHLAPGHGMDD 366

Query: 231 YVTSLKYGLPILSPVDDEGKFT-----EEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 285
           Y    K G+  ++PV+D G FT     E      G  VL  G+  V+  L +++    E 
Sbjct: 367 YELCTKLGIEAVAPVNDLGCFTAAALPENPEVLEGTPVLDGGSKKVLTLLGDKVLATHE- 425

Query: 286 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            Y+HKYPYDWRTK P I RATEQWFA V+  +  A+  + + +++P
Sbjct: 426 -YKHKYPYDWRTKLPVIIRATEQWFADVQHVKDDALKRLEKCQFIP 470



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 157/347 (45%), Gaps = 53/347 (15%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S DYT D+ IGP VL        K R TL+ LLG++H        S   L
Sbjct: 660 GPDALRLWVASSDYTRDISIGPSVLLANHTALVKYRLTLKMLLGSMH------VRSQAPL 713

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT--GG 456
            ++DQ AL QL   V+++  +YES +  +    I R+I   LS FY +  KDRLY   GG
Sbjct: 714 SLLDQIALIQLGECVRHVTSAYESTEHHRGVNAINRYINGGLSAFYIEAIKDRLYCDDGG 773

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                      VL      ++ ++API PHL E+ W+  P     +D   A +   +K+P
Sbjct: 774 ----------GVLPEIFHGLLCMLAPICPHLVEEAWEYRPEWMKSDD---AIWQHPAKYP 820

Query: 517 VLDEKWRTFP----VGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL-FTDDA 571
           +     R       V E +    ++     +    E AR  K IGSSLE+ V L     A
Sbjct: 821 LSLLHRRIMKPERLVAESWHVQHLMAANAAIKAAQEEARADKKIGSSLESTVVLQVPPSA 880

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI-- 629
            L   + E     H+   L  +F++S+V++    P         +G  + E KD +++  
Sbjct: 881 HLLFEVYE-----HE---LAAMFVVSKVKLRTLEPKETGMGEEKAG--MEECKDWLYVRG 930

Query: 630 -----GVSRA-----EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                G+++A     E  KC RCW +   V        LC RC  V+
Sbjct: 931 FETEGGMAKAIVLPTEDHKCPRCWRFVAPV-----EDELCRRCDRVV 972


>gi|395531401|ref|XP_003767767.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Sarcophilus
           harrisii]
          Length = 998

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 190/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADW+N Y T D +YEA Q+++F QM  +  IYR  KPV WSPS+RTALAEA
Sbjct: 189 SAFIRWGIMADWDNCYYTFDKKYEAQQLKMFYQMYTKDLIYRAYKPVFWSPSARTALAEA 248

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVS SIYA F ++  PP  + +L    P +   +WTT PWT+PAN AV    +
Sbjct: 249 ELEYNPKHVSHSIYAKFPLLKPPPLLASVLEGSSP-VSAIIWTTQPWTIPANQAVCYMPE 307

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y++V+  +  E                       F I+A++ V ++    GT+  +  
Sbjct: 308 SNYSIVKCTNSGE-----------------------FYILAAEKVSSVATVLGTEFEVIS 344

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+DLEN   VHP+   +   ++   ++    GTG+VH AP HG EDY+ + ++ LP+
Sbjct: 345 TFLGADLENGSCVHPIIADRVSPLLPAQHVNLSKGTGMVHIAPAHGMEDYIVASRHELPM 404

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FTE AG +    + L +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 405 DCLVDEDGNFTEAAGSELENKNALEEGTDTVIKMLQSTKNLLKEEDITHSYPYDWRTKKP 464

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I R+++QWF  +      A +++ +VK++P
Sbjct: 465 VIIRSSKQWFVKIGNMTATAKESLKKVKFIP 495



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 169/341 (49%), Gaps = 30/341 (8%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
           P YGAD+LR WV+      +V IG ++L    D   KLR TLR+LLGNL D+    +S+ 
Sbjct: 679 PPYGADILRWWVAESHIFSEVKIGSRILNAARDNIDKLRNTLRFLLGNLADFNPKTDSVP 738

Query: 395 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
           ++++ +IDQY L  L++  K + ++Y  Y F K+ + +Q F    LSNFYF + KDRLY 
Sbjct: 739 FEEMYIIDQYMLHLLQDFGKKVTDAYRQYDFGKVIRHLQAFYPSQLSNFYFSIIKDRLYC 798

Query: 455 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                  RRSCQT L+  L  +VR IAPILPHLAE+V+Q++P+          + VF S 
Sbjct: 799 EKENDLKRRSCQTALAEILDVMVRAIAPILPHLAEEVFQHIPYE------KEPKSVFRSG 852

Query: 515 WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIG-SSLEAKVYLFTDDASL 573
           W      W+             LE   E    +  A  G + G +SLE  V +  D   L
Sbjct: 853 WITTSTLWKK----------PGLEEAVEAACGMRDAFLGSIPGKNSLEYDVTVVIDPGLL 902

Query: 574 ASRLREMCTAKHDA-DTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EG---KDK 626
              +  +   K      L  + + SQ+ +L   P  +  + I   G Y +  EG   +  
Sbjct: 903 FEIIEMLHEQKTSGMSQLSELMMASQLSLLAQDPIAIPADAIELKGSYEINLEGICEQSS 962

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
             + V+ +   KC RCW Y++   +      LC RC EVLA
Sbjct: 963 YKVIVTPSTKEKCPRCWKYASDSPN-----ELCPRCTEVLA 998


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| isoleucine--tRNA ligase [Clostridium leptum DSM 753]
          Length = 931

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 189/335 (56%), Gaps = 36/335 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR G   +W+NPY+TL  E+EA QIEVF +M+ +GYIY+G KPV+W P  +TALAEA
Sbjct: 141 SQFKRLGGIGEWDNPYITLQKEFEATQIEVFAEMACKGYIYKGLKPVYWCPDCQTALAEA 200

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---LAVWTTTPWTVPANAAVAV 118
           E+EY E     SIY  F +        GLL +   DL      +WTTT WT+PAN A+ V
Sbjct: 201 EIEYAEDPCD-SIYVKFLVT----DDKGLLTQMGADLSKTYFVIWTTTTWTLPANDAICV 255

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
                Y++V                        K + + +++  +     ++A   T   
Sbjct: 256 GPNFTYSLV------------------------KWEDEYYVMAEALYESAMKAAGKTGYQ 291

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY- 237
           +  T+ G DLE  +  HP  +R   V++ GD++T ESGTG VHTAPGHG +D+     Y 
Sbjct: 292 VVGTIQGKDLEYMKTAHPFIDRTSLVIV-GDHVTLESGTGCVHTAPGHGVDDFNVCQNYP 350

Query: 238 GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
            +P++ PVD  G+ TEEAG KF+GL      N A+ ++L E  +L   E   H+YP+ WR
Sbjct: 351 DIPVIVPVDSLGRMTEEAGEKFAGL-TTSQANAAIAEHLKETGALFAMEKIIHQYPHCWR 409

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            K   +FRATEQWF SVE F++ A+ AI  V+W+P
Sbjct: 410 CKNQVLFRATEQWFCSVEDFKEDAVKAIQDVQWIP 444



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 209/380 (55%), Gaps = 44/380 (11%)

Query: 297 TKKPTIFRA--TEQWFASVEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYT 353
           TK    ++A  T  W    EG + +     G    + PQE    YGAD+LRLWV+S DY 
Sbjct: 584 TKGTAPYKAVVTHGWVVDGEGRKMSKSLGNG----IEPQEIVDQYGADILRLWVASSDYH 639

Query: 354 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENI 412
            D+ I   +L+Q+S+ YRK+R T RY+LGNL+D+    + +  D L  IDQ+AL +L+ +
Sbjct: 640 ADIRISKDILKQLSEAYRKIRNTARYILGNLYDFNPDTDRVPLDQLLPIDQWALKKLDEL 699

Query: 413 VKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAH 472
            + +RE Y++++F +++  I  F +VD+SNFY DV KDRLY        RR+ QT +   
Sbjct: 700 NQKVREGYDAFEFHQVYHAIHNFCVVDMSNFYLDVIKDRLYAEKADGKLRRAAQTAIYTI 759

Query: 473 LLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL-----DEKWRTFPV 527
           L ++ R+IAPIL + A+++W+ +P       G+    V  ++ P L     DE +     
Sbjct: 760 LDAMTRMIAPILAYTADEIWEYMPH----HQGADGRNVMYNQMPELTGVKADEAFTA--- 812

Query: 528 GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDA 587
                W +I  LR +V K LE++R  K+IG SLEA V L+         L +    K   
Sbjct: 813 ----RWDRIHALRDDVQKALELSRKEKVIGKSLEASVTLYC-----GGELYDF--VKSVE 861

Query: 588 DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK-DKVWIGVSRAEGSKCERCWNYS 646
           + L+ +FI+S+V+V+              GE  ++G+ +   + V +A G KCERCW YS
Sbjct: 862 EELKTVFIVSRVDVVK------------GGEGAIQGEVEGFSVTVGKAGGEKCERCWVYS 909

Query: 647 TQVGSFVEHPTLCSRCYEVL 666
             VG+  EHPTLC+RC  ++
Sbjct: 910 DTVGADPEHPTLCARCAAIV 929


>gi|421894305|ref|ZP_16324795.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
 gi|385272849|emb|CCG90167.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
          Length = 933

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 193/331 (58%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR G+ A+W++PYLTL+PE+EA +I  FG+M+  G IYRGKKPV WS SS +A+AEAE
Sbjct: 138 DFKRLGISAEWDHPYLTLNPEFEAQEIRTFGRMAELGLIYRGKKPVFWSWSSESAMAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + YA            G+L+E   +    VWTTTPWT+PA+  + ++A  
Sbjct: 198 VEYHDVTSPSAFYA-----EKVSDGKGVLDE---NTYFVVWTTTPWTIPASEGITIDAGF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKK 181
            Y+VV+           PA +  +             ++A+D +     ++G + V   +
Sbjct: 250 DYSVVQ-----------PAGEDRK------------FVIATDRLNYAAEQFGWEDVQTLQ 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            + G +L+  + +HP DN +  VV+ GD++T +SGTGLVHTAPG G++D+    +YGL I
Sbjct: 287 VIRGRELDRIKAIHPFDNDRELVVMLGDFVTLDSGTGLVHTAPGFGEDDFRVGKEYGLDI 346

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD G  T EAG  F G+    D N   +  L    +L+ +  Y H YP+DWRTKKP
Sbjct: 347 FVPVDDRGYMTAEAGPDFEGV-FYEDANAIALDKLKASNALLKQMDYVHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI  V+++P
Sbjct: 406 IIFRATPQWFASVDKIRDQILKAIEDVEFLP 436



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 177/338 (52%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           VP +     GA+++RLWVSS+D + DV +  +   + S+ Y+K+R T+RYLL N  D+  
Sbjct: 607 VPDEINKKMGAEIIRLWVSSIDSSSDVRVSQENFVKASESYKKIRNTVRYLLANTSDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N + Y++L   D+Y L Q   ++  IR SY++Y F  I++ +  +II DLS FY D A
Sbjct: 667 KENGVDYNELRPEDRYMLVQFNELISKIRASYDNYDFIDIYKTLLNYIITDLSAFYLDFA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD +Y     S  RRS QTV    L+ + ++I PILPH AE++W+ L            E
Sbjct: 727 KDVVYIEPENSLKRRSMQTVFYEILVGLTKLITPILPHTAEEIWEYLR--------EPEE 778

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           FV  ++ P +     T     +  W  I ELR+ V K LE AR  K+IG S+EAK  L+ 
Sbjct: 779 FVQLAEMPEVAN--YTDGADLLSKWQSIKELRSHVLKALEEARDSKMIGKSMEAKATLYL 836

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           D+ S    + E+         L+ I I+SQ+EV        +   P          D++ 
Sbjct: 837 DE-STKQLVDELGV------DLRLILIVSQLEV------KALSEAPKDAAIF---DDQLA 880

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + ++ A+G  CERC    T VGS     TLC+ C +++
Sbjct: 881 VEITPAQGEVCERCRMTKTDVGSDEHFATLCASCAQIV 918


>gi|261188850|ref|XP_002620838.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239591980|gb|EEQ74561.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 1069

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 197/338 (58%), Gaps = 35/338 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+++ V ADW   + T+D  +E  Q++VF +M  +G IYR  KPV+WSPSSRTALAEAEL
Sbjct: 202 FQKWAVMADWEGVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAEL 261

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H+S +    F +VS P     +L     ++   +WTTTPWT+PANAA+AV+  L 
Sbjct: 262 EYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLD 321

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VV  +S   G     ++++    ++L+D +    ++ S ++       G++LV K T 
Sbjct: 322 YSVV--KSERHGYLVIGSSRREYIQSLLQDDE--ITVIGSPIL-------GSELVSKATY 370

Query: 184 A-----GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
                 GSD +               VI  D++T +SG+GLVH APGHG EDY     +G
Sbjct: 371 RPLFKDGSDPQR--------------VIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHG 416

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +   +PVDD G FTE A        SG  VL +GN  V++Y++ +  L+ +  YEHKYPY
Sbjct: 417 ITFHTPVDDGGLFTEAAMPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPY 476

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K P I RATEQWFA V   R  A+ A+  V++VP
Sbjct: 477 DWRSKLPVIVRATEQWFADVGDIRDNAIRALEDVQFVP 514



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 168/337 (49%), Gaps = 25/337 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++IG  VL+ ++    K R T + LLG+L D+    ++ ++ L
Sbjct: 730  GVDALRLWVASSDYTKDIVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRAVPHESL 789

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL N+V   +++Y S++F+K+   I ++  ++ S FY +  KDRLY     
Sbjct: 790  RIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRLYADSPD 849

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            S +RR+ QT L         ++AP++P L E+ W++ P     +     + V     P  
Sbjct: 850  SLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTPETIKTKFAPPLQRVMTKPSPEW 909

Query: 519  --DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              D+   +FP+        ++ + T V  + E AR  K +GSSL++ +++    ++  + 
Sbjct: 910  QNDKLEESFPL--------LMAINTAVKTMQENARNKKEMGSSLQSFIHISVPCSATQAP 961

Query: 577  LREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEG---KDKVWI 629
            + E        D LQ +F++S V V        P        Y+  +   G   + +VWI
Sbjct: 962  IFEQF-----GDELQDLFVVSSVTVGYNDAAPPPEIEYAEWKYNSNFEFPGSSQRGRVWI 1016

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +A   KC RCW Y   +    + P LC RC + +
Sbjct: 1017 YTPQA--IKCGRCWRYQVPLEPKQDDP-LCQRCVDAM 1050


>gi|50548447|ref|XP_501693.1| YALI0C10780p [Yarrowia lipolytica]
 gi|49647560|emb|CAG82002.1| YALI0C10780p [Yarrowia lipolytica CLIB122]
          Length = 972

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 195/332 (58%), Gaps = 29/332 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+  G+  DW NPYLT+  E+E AQ+ +F ++  +G +YR  KPV+W   +RTALAEAEL
Sbjct: 177 FRGLGIMGDWENPYLTMSHEFEVAQLRIFQELLTRGRMYRKIKPVYWGWETRTALAEAEL 236

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY   H S++++  F +     + + +  ++ PDL + +WTTTPWT+ AN A +V+  ++
Sbjct: 237 EYNPKHKSQAVFVAFPLNEKSDTLAEVTKDY-PDLAIVIWTTTPWTLVANRACSVHKDVE 295

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV               +++  G          ++V   LV +L  K G   ++   +
Sbjct: 296 YAVV---------------RQTCSGR--------HLLVGKKLVESLSEKLGELEIVGDGI 332

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS+L +  Y +P+ +   P +   DY++ ESGTG+VH+APGHGQ+DY+  + +G+   S
Sbjct: 333 FGSELTSSTYTNPLTDTHHP-IYHADYVSDESGTGMVHSAPGHGQDDYLFCMGHGIAPYS 391

Query: 244 PVDDEGKFT----EEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PV+  G +T    E+    +G  VLG+G  AV+    +   L+ +E Y H YPYDWR+KK
Sbjct: 392 PVNASGHYTSDLPEKLADLAGKHVLGEGQKAVIALATKNKMLLQKESYTHSYPYDWRSKK 451

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I R+T QWFA+V+  ++  + A+ QV++VP
Sbjct: 452 PIIIRSTPQWFANVDDIKEDTIKALDQVEFVP 483



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 26/331 (7%)

Query: 336 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISY 395
           P  G D +RLWV+  D+T DV IGP +L+ + +  RKLR T R+LLGNL  +     ++Y
Sbjct: 666 PALGIDGIRLWVAQSDFTNDVAIGPVILKHVGEFTRKLRTTFRFLLGNL-GYGKQVDLNY 724

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
            DL ++D+ AL  L  +    ++ Y  +QF +++Q I   +   LS+FYFD+AK+RLY  
Sbjct: 725 ADLHLVDRIALQDLHQLEVTCKDYYSKHQFNRVYQQISHHMNTCLSSFYFDIAKERLYVN 784

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 515
             +S +R+S   VLS  L + + +++P+ P L ++V     F     +G++    +E+ W
Sbjct: 785 DVSSQSRQSVAYVLSEVLKTYLAILSPLTPLLTQEVHNFSGF-----EGNSP---YENGW 836

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
                +W +  +  +     +   R+ V + +  AR  K IG+SL   V L  D++S   
Sbjct: 837 HETAPEWTSPEL--LKDTATVKGARSIVLQAMAQARADKKIGTSLGCDVALTIDESSDVY 894

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
           +L +    KH+ + L  +FI S V +    P+       Y+    V+G   V        
Sbjct: 895 KLLK----KHEGE-LAELFITSGVSLNTEVPS----EWSYAASGEVDGT-LVTATAKTPA 944

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G KC RCW ++           LC+RC EV+
Sbjct: 945 GCKCPRCWQFTAPAEDI-----LCTRCDEVV 970


>gi|239615331|gb|EEQ92318.1| isoleucyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 1090

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 197/338 (58%), Gaps = 35/338 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+++ V ADW   + T+D  +E  Q++VF +M  +G IYR  KPV+WSPSSRTALAEAEL
Sbjct: 223 FQKWAVMADWEGVWKTMDKSFEKNQLDVFLKMVEKGLIYRRFKPVYWSPSSRTALAEAEL 282

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H+S +    F +VS P     +L     ++   +WTTTPWT+PANAA+AV+  L 
Sbjct: 283 EYKDDHISTAGLVKFPLVSMPSQLQNMLPPNTSEVSAVIWTTTPWTLPANAAIAVSPTLD 342

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y+VV  +S   G     ++++    ++L+D +    ++ S ++       G++LV K T 
Sbjct: 343 YSVV--KSERHGYLVIGSSRREYIQSLLQDDE--ITVIGSPIL-------GSELVSKATY 391

Query: 184 A-----GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
                 GSD +               VI  D++T +SG+GLVH APGHG EDY     +G
Sbjct: 392 RPLFKDGSDPQR--------------VIAADFVTADSGSGLVHCAPGHGMEDYEVCQAHG 437

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +   +PVDD G FTE A        SG  VL +GN  V++Y++ +  L+ +  YEHKYPY
Sbjct: 438 ITFHTPVDDGGLFTEAAMPSNPSMLSGKPVLCEGNREVLRYVESKGQLLAKHKYEHKYPY 497

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWR+K P I RATEQWFA V   R  A+ A+  V++VP
Sbjct: 498 DWRSKLPVIVRATEQWFADVGDIRDNAIRALEDVQFVP 535



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 168/337 (49%), Gaps = 25/337 (7%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DYT D++IG  VL+ ++    K R T + LLG+L D+    ++ ++ L
Sbjct: 751  GVDALRLWVASSDYTKDIVIGQPVLKAVNTNLHKYRVTFKLLLGSLQDFDPSRAVPHESL 810

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +ID+ AL QL N+V   +++Y S++F+K+   I ++  ++ S FY +  KDRLY     
Sbjct: 811  RIIDRIALLQLRNLVTTCQDAYSSFEFYKVVTAITKWANLEFSAFYIESLKDRLYADSPD 870

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            S +RR+ QT L         ++AP++P L E+ W++ P     +     + V     P  
Sbjct: 871  SLSRRAAQTTLCHIYYHFQNLLAPLVPLLVEESWEHTPETIKTKFAPPLQRVMTKPSPEW 930

Query: 519  --DEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              D+   +FP+        ++ + T V  + E AR  K +GSSL++ +++    ++  + 
Sbjct: 931  QNDKLEESFPL--------LMAINTAVKTMQENARNKKEMGSSLQSFIHISVPCSATQAP 982

Query: 577  LREMCTAKHDADTLQRIFIISQVEV----LPSTPNGLIRNIPYSGEYLVEG---KDKVWI 629
            + E        D LQ +F++S V V        P        Y+  +   G   + +VWI
Sbjct: 983  IFEQF-----GDELQDLFVVSSVTVGYNDAAPPPEIEYAEWKYNSNFEFPGSSQRGRVWI 1037

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
               +A   KC RCW Y   +    + P LC RC + +
Sbjct: 1038 YTPQA--IKCGRCWRYQVPLEPKQDDP-LCQRCVDAM 1071


>gi|74354080|gb|AAI02831.1| IARS2 protein [Bos taurus]
          Length = 501

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 182/320 (56%), Gaps = 27/320 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SF R+G+ ADWNN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEAE
Sbjct: 198 SFIRWGIMADWNNCYYTFDGRYEAKQLRIFYQMYDKGLIYRSYKPVFWSPSSRTALAEAE 257

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY   H+SRS+Y  F ++   P  + LL+   P +   VWTT PWT+PAN AV    + 
Sbjct: 258 LEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSP-VSFLVWTTQPWTIPANQAVCYMPES 316

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YAVV+  S   GD                       I+ +D V ++ +  GT   +  T
Sbjct: 317 KYAVVKCSS--SGD---------------------LYILGADKVTSVASTLGTTFEVIST 353

Query: 183 LAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +G DLEN    HP +  R+ P ++  +++T   GTGLVHTAP HG EDY  + ++ L  
Sbjct: 354 FSGVDLENGSCAHPLISERESP-LLPANHVTMTKGTGLVHTAPAHGMEDYSVAAQHNLST 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G  AV+  L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMMLQAAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAA 320
            + RA++QWF ++   +  A
Sbjct: 473 VVIRASKQWFVNITDIKTTA 492


>gi|119494751|ref|ZP_01624779.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452005|gb|EAW33233.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 490

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 125/249 (50%), Positives = 176/249 (70%), Gaps = 9/249 (3%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 391
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSDIYRK+R T R+L+GNLHD+    +
Sbjct: 218 QKEPPYGADILRLWVSSVDYSTDVPLGGNILKQMSDIYRKIRNTSRFLIGNLHDFDPEKD 277

Query: 392 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 451
           +++Y++LP +DQY L ++  +   I+++++ +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 278 AVAYEELPDLDQYMLHRITEVFTEIKDAFDQFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 337

Query: 452 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 511
           LY     S  RRSCQTVL+  L S+ + I+P+L H+AED+WQNLP++      +    VF
Sbjct: 338 LYISAENSIRRRSCQTVLAVALESLAKAISPVLCHMAEDIWQNLPYS------TPYLSVF 391

Query: 512 ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           ES W  L+E W+   + +  FW K+ E+R EVN+V+E AR  K+IGSSLEAKV L+  D 
Sbjct: 392 ESGWVKLEENWKQPELAK--FWQKLREIRAEVNQVMEKARKEKMIGSSLEAKVLLYVADE 449

Query: 572 SLASRLREM 580
            L  +L EM
Sbjct: 450 KLREQLDEM 458



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 333
           DWRTKKPTIFRATEQWFASVEGFR+ A+ AI  V+W+P Q
Sbjct: 1   DWRTKKPTIFRATEQWFASVEGFREEALKAIKDVRWIPAQ 40


>gi|386811898|ref|ZP_10099123.1| isoleucyl-tRNA synthase [planctomycete KSU-1]
 gi|386404168|dbj|GAB62004.1| isoleucyl-tRNA synthase [planctomycete KSU-1]
          Length = 935

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 197/331 (59%), Gaps = 26/331 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FK  GV  DW +PYLT +P+YEA  IEVF ++  +G IYR +KP+HW    +TALAEAEL
Sbjct: 140 FKALGVMGDWEHPYLTFNPQYEAGVIEVFEKLVKRGCIYRSQKPIHWCTRCQTALAEAEL 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWTTTPWTVPANAAVAVNAKL 122
           EY     S SIY  F++       + LL     D L + +WTTTPWT+PAN AVA++++ 
Sbjct: 200 EY-RNETSPSIYVNFKITDN--GVNDLLKGIDNDALYVMIWTTTPWTLPANLAVALHSEY 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +YA +   +        P   K +  ++L D++  F++       +L    G + + K  
Sbjct: 257 EYAAIRYMN--------PRTHK-KEVSILADKRVEFVM-------SLLGIQGYEYLGK-- 298

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE  +Y HP   R   +V+   Y+T   GTG VH APGHGQEDY+T +KY LP L
Sbjct: 299 VHGGVLEGIKYQHPFLKRVGSIVLAS-YVTLSDGTGCVHIAPGHGQEDYLTGIKYQLPPL 357

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV+  G FT+EAG+F+G ++  +GN +++K L++   L  +  + H YP+ WR K P I
Sbjct: 358 SPVNAVGIFTDEAGEFAGQNI-KEGNTSIIKKLEDAGILFYKTDFTHSYPHCWRCKDPVI 416

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           FRATEQWF +++    RQ  ++ I Q +W+P
Sbjct: 417 FRATEQWFVNLDHNNLRQRILEEIKQAQWIP 447



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 190/330 (57%), Gaps = 23/330 (6%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           +GAD+LRLW SS+DY  D+ +   ++ + SD YR++R T RYLL NL+D+    N+ SY+
Sbjct: 627 FGADILRLWTSSMDYQNDMNVSHNLIVRCSDAYRRIRNTFRYLLSNLYDFDPKVNTTSYE 686

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL + + ++K++  +YES+QF ++F  I  F  V++S FY D+ KDRLYT  
Sbjct: 687 ELLEIDRWALHKTQELIKDVTSAYESFQFHRVFHNIYNFCTVEMSAFYLDILKDRLYTFA 746

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTV+   L ++V++ API+ H AE+ W  +     +        +  + +P
Sbjct: 747 QNSKERRAAQTVIYYILPNLVKLSAPIIVHTAEEAWSAI-----IHKDEDVWSIHLATFP 801

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
               +W    + E   W K++ +R++V + LE  R+ KLIG+SLEA V L+ ++  L   
Sbjct: 802 NYTPEWIDNSLHEK--WEKLINIRSDVARELEKMRSAKLIGNSLEASVNLYPENEELWRF 859

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L      K+  + L  +FI+S+V+        L RNI  S     E  + +WI  + ++ 
Sbjct: 860 L------KNYENELPTVFIVSEVK--------LDRNIS-SKAVKGELTNGLWIECNVSQH 904

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCWN+   VG   EHPTLC RC   L
Sbjct: 905 KKCERCWNFRESVGLSKEHPTLCGRCITAL 934


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/328 (43%), Positives = 190/328 (57%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TLD  YEA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 141 FKRLGVRGDWENPYVTLDHGYEAQQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +V       G       D    +WTTTPWT+PAN  ++V+  L 
Sbjct: 201 EYHDKR-SPSIYVAFDVVDGKDVLDG-------DEKYVIWTTTPWTIPANLGISVHPDLD 252

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y VV++            NK              FI+    L             I KT+
Sbjct: 253 YVVVKVD----------GNK--------------FIVAQGLLEQLETELEWQDYEILKTV 288

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G  LEN    HP  +R   V++ G+++T E+GTG VHTAPGHG++D++   KYGL +L 
Sbjct: 289 KGIKLENTVAKHPFYDRSSLVMV-GEHVTLEAGTGCVHTAPGHGEDDFIVGQKYGLDVLC 347

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G  TEEA  F GL    + N  + + L E  +L+      H YP+DWRTKKP ++
Sbjct: 348 PVDDKGVMTEEAPMFEGL-FYDEANKPITEKLKEVGALLHLSFMTHSYPHDWRTKKPVMY 406

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR+  +  I +V WVP
Sbjct: 407 RATAQWFASIKDFREDLLKEINEVNWVP 434



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 199/359 (55%), Gaps = 35/359 (9%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           +++G  +    ++G V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 588 TLDGEGRKMSKSVGNVV-VPDKVMKQLGADILRLWVSSVDYQADVRVSDNILKQVAEVYR 646

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           K+R T R++LGN+HD+    + ++++D+  +DQY + +L  +VK++R SYE +QF  ++ 
Sbjct: 647 KIRNTFRFMLGNIHDFNPETDKVNFEDMSELDQYMIVKLNQLVKDVRNSYEEFQFGSVYN 706

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  F  ++LS+FY D+AKD LY    +   RR  QTV+   L+++ ++++PIL H  ++
Sbjct: 707 KVHNFCTIELSSFYMDLAKDTLYIQHASHPDRRGIQTVMYETLVALTKLMSPILSHTTDE 766

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLE 548
           VW+++P       G   E V  +  P + E    + V +  +  W   +ELR +V K LE
Sbjct: 767 VWKHIP-------GVTTESVQLTDIPEVKE----YHVSDHLVEKWDHFMELRDDVLKALE 815

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            AR  K I  SLEA + ++ D+       +E+     +  +L ++FI S   V   +   
Sbjct: 816 EARNEKGIKKSLEAALAIYADEKD-----QELLA---NIPSLNKLFITSTATVSQKS--- 864

Query: 609 LIRNIPYSG-EYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              + P    EY     + + I V  AEG KCERCW  +   G   +HP LC  C +++
Sbjct: 865 ---DAPSEAKEY-----NYLKIVVDFAEGEKCERCWVVTPSRGKHEDHPGLCDSCTDIV 915


>gi|336066306|ref|YP_004561164.1| isoleucyl-tRNA synthetase [Erysipelothrix rhusiopathiae str.
           Fujisawa]
 gi|334296252|dbj|BAK32123.1| isoleucyl-tRNA synthetase [Erysipelothrix rhusiopathiae str.
           Fujisawa]
          Length = 906

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 196/334 (58%), Gaps = 40/334 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FK  G   D+ NPYLTL+ ++EA QI VF +M+++G IY+G KPV+WSPSS +ALAE
Sbjct: 136 MADFKSLGKIGDYKNPYLTLNKDFEATQIRVFAEMAMKGMIYKGLKPVYWSPSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVWTTTPWTVPANAAVAV 118
           AE+EY E     +I+  F +V       G+L     D G  + +WTTTPWT+PAN A++V
Sbjct: 196 AEIEYRERR-DPAIFVAFDVVDG----KGVL-----DAGDKMVIWTTTPWTIPANLAISV 245

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI-IVASDLVPTLEAKWGTKL 177
           NA ++Y +V+ +                 GN+      VF+  +    +  LE + G   
Sbjct: 246 NANMEYVLVQTEK----------------GNM------VFMESLMESALKELELEQGE-- 281

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I K   G D+E     HP+ +R  P V+ GD++T E+GTG VHTAP HG +D+     Y
Sbjct: 282 -ILKRFKGRDIEGVTTQHPLYDRLSP-VLNGDHVTDEAGTGCVHTAPDHGVDDFNVCALY 339

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           G+  +SPV+++G  TE  G+F+GL    + N AV   L+   +L+     +H Y +DWRT
Sbjct: 340 GIKPISPVNEQGVLTEVTGEFAGL-FFEEANKAVTMKLESLGALLKMGWIKHSYAHDWRT 398

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KKP I+RAT QWFAS++  RQ  +D I +V+W P
Sbjct: 399 KKPIIYRATTQWFASIDSVRQNVLDEIEKVEWTP 432



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 42/332 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD+LRLWV+SVDY  D+ +   +L+Q+S+ YRK+R T R++ GNL ++ +  + I+ ++
Sbjct: 611 GADILRLWVASVDYHSDIKMSQDLLKQVSESYRKIRNTFRFMHGNLANFDIDVDGIAIEE 670

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L ++++Y L ++  + K  +E+Y+++ + K+   +   +   +S++Y D  KD LY    
Sbjct: 671 LSLLNRYVLNEVIRVNKEAQEAYKAFDYQKVTTSVVSSLTNMMSSYYLDYTKDILYIEKE 730

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-- 515
              +RR  QTV+   L+   R++APIL H  E++  N  F    E     EF   SK   
Sbjct: 731 DDRSRREIQTVIYHALMIYSRIMAPILVHTTEEL--NRVFRPEDESIHLQEF---SKLVN 785

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P+L          E+     +L+LR  V K LE  R  K+IG SLEA V L  ++A   +
Sbjct: 786 PILSSD-------EVTSMDSLLKLREAVFKALEEKRAEKVIGKSLEAHVRLHLNEAD-ET 837

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLVEGKDKVWIGVSRA 634
           R++ +   KHDA    + FI+S++E        L+R+ +P    Y V         V + 
Sbjct: 838 RVQSIL-GKHDA----QWFIVSKLE--------LVRDALPEVMGYEV--------SVEKV 876

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG  C RCWN    VG       LC RC++V+
Sbjct: 877 EGHTCPRCWNIVDVVGE----DELCLRCHDVV 904


>gi|323342891|ref|ZP_08083123.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464003|gb|EFY09197.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 906

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 196/334 (58%), Gaps = 40/334 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FK  G   D+ NPYLTL+ ++EA QI VF +M+++G IY+G KPV+WSPSS +ALAE
Sbjct: 136 MADFKSLGKIGDYKNPYLTLNKDFEATQIRVFAEMAMKGMIYKGLKPVYWSPSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVWTTTPWTVPANAAVAV 118
           AE+EY E     +I+  F +V       G+L     D G  + +WTTTPWT+PAN A++V
Sbjct: 196 AEIEYRERR-DPAIFVAFDVVDG----KGVL-----DAGDKMVIWTTTPWTIPANLAISV 245

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI-IVASDLVPTLEAKWGTKL 177
           NA ++Y +V+ +                 GN+      VF+  +    +  LE + G   
Sbjct: 246 NANMEYVLVQTEK----------------GNM------VFMESLMESALKELELEQGE-- 281

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I K   G D+E     HP+ +R  P V+ GD++T E+GTG VHTAP HG +D+     Y
Sbjct: 282 -ILKRFKGRDIEGVTTQHPLYDRLSP-VLNGDHVTDEAGTGCVHTAPDHGVDDFNVCALY 339

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           G+  +SPV+++G  TE  G+F+GL    + N AV   L+   +L+     +H Y +DWRT
Sbjct: 340 GIKPISPVNEQGVLTEVTGEFAGL-FFEEANKAVTMKLESLGALLKMGWIKHSYAHDWRT 398

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KKP I+RAT QWFAS++  RQ  +D I +V+W P
Sbjct: 399 KKPIIYRATTQWFASIDSVRQNVLDEIEKVEWTP 432



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 177/332 (53%), Gaps = 42/332 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GAD+LRLWV+SVDY  D+ +   +L+Q+S+ YRK+R T R++ GNL ++ +  + I+ ++
Sbjct: 611 GADILRLWVASVDYHSDIKMSQDLLKQVSESYRKIRNTFRFMHGNLANFDIDVDGIAIEE 670

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L ++++Y L ++  + K  +E+Y+++ + K+   +   +   +S++Y D  KD LY    
Sbjct: 671 LSLLNRYVLNEVIRVNKEAQEAYKAFDYQKVTTSVVSSLTNMMSSYYLDYTKDILYIEKE 730

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-- 515
            + +RR  QTV+   L+   R++APIL H  E++  N  F    E     EF   SK   
Sbjct: 731 DNRSRREIQTVIYHALMIYSRIMAPILVHTTEEL--NRVFRPEDESIHLQEF---SKLVN 785

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P+L          E+     +L+LR  V K LE  R  K+IG SLEA V L  ++A   +
Sbjct: 786 PILSSD-------EVTSMDSLLKLREAVFKALEEKRAEKVIGKSLEAHVRLHLNEAD-ET 837

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLVEGKDKVWIGVSRA 634
           R++ +   KHDA    + FI+S++E        L+R+ +P    Y V         V + 
Sbjct: 838 RVQSIL-GKHDA----QWFIVSKLE--------LVRDALPEVMGYEV--------SVEKV 876

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           EG  C RCWN    VG       LC RC++V+
Sbjct: 877 EGHTCPRCWNIVDVVGE----DELCLRCHDVV 904


>gi|406837715|ref|ZP_11097309.1| isoleucyl-tRNA ligase [Lactobacillus vini DSM 20605]
          Length = 931

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 196/331 (59%), Gaps = 34/331 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLTLDP++EA +I VFG+M+ +G IY+GKKPV WS SS +ALAEAE
Sbjct: 138 DFKRLGVAGEWDNPYLTLDPKFEAQEIRVFGKMAERGLIYKGKKPVFWSWSSESALAEAE 197

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY +     + Y   ++V       G+L+E   D  + VWTTTPWT+PA+  + V+   
Sbjct: 198 VEYHDVTSPSAFYGE-KVVDG----KGVLDE---DTYMVVWTTTPWTIPASEGITVDKDF 249

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            Y+VV+           PA           D++K   ++AS+LV      +G K   + K
Sbjct: 250 DYSVVQ-----------PAG----------DERK--FVLASELVEKNAELFGWKDYQVVK 286

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           TL G DLE     HP    +  + + GD++T ++GTGLVHTAPG G++D+    +YGL I
Sbjct: 287 TLKGQDLEYILTQHPFYPDKTLLTMLGDFVTLDAGTGLVHTAPGFGEDDFNVGKQYGLEI 346

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             PVDD+G  T + GK F+G+    D N   +  L E   L+   P +H YP+DWRTKKP
Sbjct: 347 YVPVDDKGYLTPDTGKDFAGV-FYDDANEISLNKLKEAGLLLKYLPIKHSYPFDWRTKKP 405

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFASV+  R   + AI +VK+ P
Sbjct: 406 IIFRATPQWFASVDKIRDEILAAIDEVKFFP 436



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 41/342 (11%)

Query: 335 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           APG     +GA+++RLWV SVD + DV +      Q+S+ YRK+R T+R++L N  D+  
Sbjct: 607 APGKVIKQFGAEIIRLWVLSVDSSADVRVSMDSFSQISEAYRKIRNTIRFMLANTTDFDP 666

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++++D L  +DQY   ++    K + + Y  Y F  I++ +  F+  DLS FY D+A
Sbjct: 667 KQNAVAFDQLESLDQYMEIKVNQFTKEVLDCYAKYDFMDIYKKLLNFVTTDLSAFYLDIA 726

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDG 504
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E++WQ L     +A   E  
Sbjct: 727 KDVVYIESKDSHKRRSMQTVLYDITVRLAKLLTPVLPHTTEEIWQYLKEPEDYAQLAEMP 786

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
           +   +  E+K              ++  W   +++R++V K LE AR  KLIG S EA V
Sbjct: 787 AVNHYNDEAK--------------KLAVWNVFMKVRSDVFKSLENARNQKLIGKSFEAHV 832

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+ +D     RL ++ T       L++  I+S + V        +   P   E   + +
Sbjct: 833 TLYLNDEE-RHRLEQLKT------DLRQNLIVSALTVKS------LAGAPAEAE---KYR 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           D+  + V  A G  C RC    T VG   + PTLC RC  ++
Sbjct: 877 DRAVV-VEHAAGDVCPRCRMIRTDVGGNPKLPTLCGRCAAIV 917


>gi|340897454|gb|EGS17044.1| mitochondrial isoleucyl-tRNA synthetase-like protein [Chaetomium
           thermophilum var. thermophilum DSM 1495]
          Length = 1375

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 197/341 (57%), Gaps = 32/341 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V ADW+  + T+D EYE  Q+ +F +M+ +G +YR  KPV+WSPSS TALAE
Sbjct: 537 MKSFRSYAVMADWDARWATMDREYEIRQLRLFQKMARRGLVYRRFKPVYWSPSSGTALAE 596

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVSRS Y  F +V    +  G L  F   L   +WTTTPWT+PAN A+AV+ 
Sbjct: 597 AELEYNENHVSRSAYIRFPIVGDYGNLPG-LEGFQGKLYAVIWTTTPWTLPANRAIAVHE 655

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L Y +V++    +GD+   A       N L    K+ I          E + G ++   
Sbjct: 656 DLTYHIVKV----DGDAYLVAE------NCLGRVAKILI---------KEGEEGAEVAAP 696

Query: 181 KTLA---GSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           + L    G  L    YV+ +  R      +I G ++T  SG+GLVH APGHG +DY   L
Sbjct: 697 EILGSVKGRQLTQLCYVNALRGRSAAPQPIIHGHFVTEASGSGLVHCAPGHGFDDYQACL 756

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
              +P+ +PVD++G FTEEA      +  G  VL DG  AV++ L + +  + +  Y+HK
Sbjct: 757 PLDIPVDAPVDNDGLFTEEAYPDDPARLKGRSVLEDGGPAVLEILGDDVLKVHD--YKHK 814

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKP I RAT QWFA VE  +  A+ A+ +VK+VP
Sbjct: 815 YPYDWRTKKPIIIRATAQWFADVELIKNQAVAALEEVKFVP 855



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 35/336 (10%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G D LRLWV+S DY+GDV++G  VL+ +     K R T+R L G++H+     S     L
Sbjct: 1064 GPDALRLWVASSDYSGDVVLGEPVLKTIHQAILKYRTTIRMLTGSMHE-----SARTAPL 1118

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              +D  AL QL + +  +   Y +++F K F  +  ++  DLS FY +  KDRLY     
Sbjct: 1119 TTLDHIALIQLRDAMDAVGRHYANFEFNKAFMTLNHWLTNDLSAFYLEALKDRLYCADGG 1178

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP---FAYTLEDGSAAEFVFESKW 515
                     VL    +  +R++AP+ P L E+ W++ P    A +    S  + ++E+  
Sbjct: 1179 G--------VLEPIFIGFLRMLAPMTPVLVEEAWEHRPEWLKADSKYADSPLKHLYEA-- 1228

Query: 516  PVLDEKWRTF-PVGEIYFWGK---ILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
            P+L +  R   P  E         I+     +    E ART K++GSSL   V L   + 
Sbjct: 1229 PLLHDPSRALSPEDEARLRKDIPVIMRSLAAIKAASEKARTDKVLGSSLACNVVLHVPE- 1287

Query: 572  SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGV 631
               SR RE    +  A  L  +F++S VEV    P  +     Y   + +EG +   + +
Sbjct: 1288 --GSRAREAL--ERYAGELDTMFVVSAVEVGGEVPADVAWK--YEEVFEIEGTECKAVVI 1341

Query: 632  SRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               +  KC RCW Y  +     +   LC RC EV+ 
Sbjct: 1342 PPRQ-VKCPRCWRYVAE-----KEDVLCGRCEEVVG 1371


>gi|320165702|gb|EFW42601.1| isoleucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1078

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 206/347 (59%), Gaps = 21/347 (6%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F  +GV  DW +PYLT+ P YEA Q++VF Q+  +  IYRG KPVHWSPS++TALAEAEL
Sbjct: 209 FMSWGVLGDWQHPYLTMTPSYEARQLQVFYQLYTKKLIYRGLKPVHWSPSTQTALAEAEL 268

Query: 64  EYPEGHVSRSIYAVFRMVSAPPST---------SGLLNE-FLPD---LGLAVWTTTPWTV 110
           EY + HVS + +  F + +   +          +G ++   L D   + + VWTTTPWT+
Sbjct: 269 EYQDNHVSVAAHVRFELPANHKAALLQAANWQDAGAVDRAALSDNLAVSMVVWTTTPWTI 328

Query: 111 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 170
           P+N A+A+N  L Y+++ +   ++   A+P  K      +    +   I+VA+ LVP++ 
Sbjct: 329 PSNQAIAINTSLDYSLLHVTEAVQ--PASPGRKWLTQTIMPSRSRDQVILVATPLVPSIV 386

Query: 171 AKWGTKLVIKKTLA---GSDL--ENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 225
             + T     K +A   G+ L     +  HP++  +   +I G ++T ++GTGLVHTAP 
Sbjct: 387 QDFATAQSQVKQVASISGASLLALGLQATHPLEAHRTVPIIHGSHVTADAGTGLVHTAPA 446

Query: 226 HGQEDYVTSLKYGLPILSPVDDEGKFTEE-AGKFSGLDVLGDGNVAVVKYLDEQMSLIME 284
           HG +D++      +P+L+ VD+ G +  + A   +GL VL  GN  V++ L++   L++ 
Sbjct: 447 HGVDDFIVCKTNNIPLLNLVDERGCYKADVAHGLAGLQVLTVGNAKVLELLEQADRLLLA 506

Query: 285 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +P +H+YPYDWR+KKP I  AT+QWFAS+   +  A+ AI  V+ VP
Sbjct: 507 KPLKHRYPYDWRSKKPVITLATKQWFASLTNVKHDALQAILGVELVP 553



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 171/337 (50%), Gaps = 28/337 (8%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 397
            G DVLR W +S DY+ DV+I    ++  + I +K+R T RYLLGNLHD+      +    
Sbjct: 758  GTDVLRAWAASADYSADVVISKDAIKAQTQIVKKIRNTFRYLLGNLHDFDPAKHLVPLAS 817

Query: 398  LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
            L ++D+  L +   +  ++++ YESY F +    I  F  V+LS FYF+++KDRLY  G 
Sbjct: 818  LRLVDRVVLQRTSALWDSVQQGYESYAFARASLAITTFCNVELSGFYFELSKDRLYAAGA 877

Query: 458  TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL---PFAYTLEDGSAAEFVFESK 514
             S  RR+ QTVL   +++I + +AP+L HLA++VW +L   P    L    AA       
Sbjct: 878  ESPERRAAQTVLYHAVVTICKAVAPVLCHLADEVWSHLQGNPEQSVLLGHQAAASSLGDV 937

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
             P L   W             +L LR  VN+ L+V R  + IGS L+A V L     S+ 
Sbjct: 938  EPSLAAAWPA-----------LLNLRAVVNRALQVPRFAQQIGSPLDADVTLELSPGSIE 986

Query: 575  SRLREMCTAKHDA--DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG----KDKVW 628
            + L+ + +    +  + L  +FI SQV ++   P      + ++    +EG       + 
Sbjct: 987  A-LQTLFSNSSASLEEQLAELFITSQVRLV-DRPEPASARLLHTQREELEGLGPSVTPIA 1044

Query: 629  IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
            + VSRA   KC RCW ++ Q     E   LC RC ++
Sbjct: 1045 VHVSRAALHKCPRCWRFTAQ-----EPAHLCQRCAKL 1076


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 198/357 (55%), Gaps = 50/357 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV+  W  PY T+   YEA  +  F + + +G++YRGKKPV+W  + RTALAEAE
Sbjct: 142 SFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYRGKKPVYWCITDRTALAEAE 201

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVA 117
           +EY E H S SIY  F +VS  P          P L      L +WTTTPWT+PAN AVA
Sbjct: 202 VEY-EQHRSPSIYVAFDLVSKLPD---------PKLAGRPARLVIWTTTPWTLPANLAVA 251

Query: 118 VNAKLQYA--------VVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 169
            + +  Y         VV  + LL G  A          +V   +  V  + A    P  
Sbjct: 252 AHPEFTYVAYDLNGQVVVVAKDLLAGFLA----------DVAPGELSVTDVPAPHSPPAH 301

Query: 170 EAKWGTKLVI--------KKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 218
           EA  G    +        ++ LA   GS LE  RY HP  +R+  V++G D++T E+GTG
Sbjct: 302 EAATGGGGTVLAPHLAHPERVLAHLDGSALEGLRYRHPFLDRESQVILG-DHVTLEAGTG 360

Query: 219 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 278
           LVHTAPGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++G  +  + N  +V  L   
Sbjct: 361 LVHTAPGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYAGKKIF-EANPEIVADLAAS 419

Query: 279 MSLIME--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
             L+ +     EH YP+ WR   P +FRAT+QWF S+E    R+A +  I +V+W+P
Sbjct: 420 GHLLSDPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKATLAEIDRVRWIP 476



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 170/329 (51%), Gaps = 44/329 (13%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RRS QT L A    ++R++APIL   A + W  LP       G   E V+ +  P
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWSYLP-------GRPTESVWLAGLP 826

Query: 517 VLDEKWRTFPVGEIYF---WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
                 R  P         +GK+ E+R  V   LE AR  KLIGS LEA V +  +    
Sbjct: 827 R-----RARPADADALEARYGKLFEVRGVVQSKLEEARRAKLIGSGLEAMVTVRAEGEQ- 880

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             RL E   A+     L  +FI+S+V         ++   P S E            V+R
Sbjct: 881 -RRLLEEARAE-----LPALFIVSKV---------VLAAGPLSAE------------VAR 913

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           A G KCERCW Y+ +VG    HPTLC++C
Sbjct: 914 APGVKCERCWIYAEEVGRDAAHPTLCAKC 942


>gi|254446531|ref|ZP_05060007.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260839|gb|EDY85147.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 911

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 190/341 (55%), Gaps = 44/341 (12%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV ADW N Y T  P YEA  +        Q  +YR KKPV+WS    TALAEA
Sbjct: 123 SQFKRLGVLADWENEYKTKKPSYEAEILRTLASFVEQDLVYRSKKPVYWSIPCATALAEA 182

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY E H S SI+  F +  A  +  G+       L + +WTTTPWT+PAN AVAV+ +
Sbjct: 183 EIEYRE-HSSPSIWVAFDI--AEKAKFGIDKP----LSVVIWTTTPWTIPANLAVAVHPR 235

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
           + YA V                         D  +   IVA DL     A  G +   I 
Sbjct: 236 MTYAFV-------------------------DAGERVHIVAKDLAEQFAADLGLENWKIV 270

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             + G  LEN +  HP  +R  P+V+  DY+TTESGTG VHTAPGHGQEDY+T LKYGL 
Sbjct: 271 HEVQGETLENVQSRHPFIDRPSPIVL-ADYVTTESGTGCVHTAPGHGQEDYMTGLKYGLD 329

Query: 241 ILSPVDDEGKFTEEA---GKFSGLDVLGD-----GNVAVVKYLDEQMSLIMEEPYEHKYP 292
           I  PV+DEGK+ ++        G  VL +      N  V+K LDE  +L+ ++   H YP
Sbjct: 330 IYCPVNDEGKYADDGQVPDFLVGESVLEEKGWVPANGKVLKALDEAGALLKKKKITHSYP 389

Query: 293 YDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           + WR+K P IFRA +QWF +++  G R+AA++AI QVKW+P
Sbjct: 390 HCWRSKTPVIFRAVDQWFVAIDKNGKRKAALEAIEQVKWIP 430



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 170/331 (51%), Gaps = 32/331 (9%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSISYD 396
           +G+DV+RLWV+S D+  D+ I  Q+L  + D YR  R T R+ L NL+D+    +S+   
Sbjct: 608 FGSDVVRLWVASTDFRNDIGISEQILGGVGDAYRLFRNTFRFQLSNLYDFDFEKDSMPIS 667

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D++A+ ++  + + + ++YE+Y+F K+FQ+  +F  V LS+ Y D+ KDRLYT  
Sbjct: 668 ELHELDRWAVHKVGELAEAVEKAYENYEFHKVFQLCNQFCSVTLSSLYHDILKDRLYTLA 727

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK-W 515
             +  RRS QT +     ++VR+  PI+P   ++ W     AY  E     E     + W
Sbjct: 728 YDAPLRRSSQTAIYHIFKTLVRITGPIIPFTTDEAW-----AYFKEGSDFTEDALALQPW 782

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P   + W+   + + +   ++   R +VN+ LE  R+   IG SL+A V +  D     S
Sbjct: 783 PTEAKDWQDQTLADDFV--ELFAFRDQVNEKLESLRSSGEIGRSLDAFVSISGD-----S 835

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
           +  +       +  L+ + I+SQVE+   +                 G D + +  S+A 
Sbjct: 836 KQEDFSRLDRYSHFLEELLIVSQVELAAQS-----------------GAD-IAVTASKAS 877

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G +C RCW +  Q+ +  ++   CSRC + L
Sbjct: 878 GGRCPRCWRWEPQLINGTDNERTCSRCDQAL 908


>gi|367018116|ref|XP_003658343.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
           42464]
 gi|347005610|gb|AEO53098.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
           42464]
          Length = 975

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 196/340 (57%), Gaps = 37/340 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M +F+ YGV ADW+  + T+D  YE  Q+ +F +M+ +G +YR  KPV+WSPSS TALAE
Sbjct: 135 MKAFRTYGVMADWDARWTTMDMAYEVRQLRLFQRMARRGLVYRRYKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS++ Y  F +V       G L+     L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNEAHVSKAAYVRFPVVGGHEGLPG-LDRLEGRLYAVIWTTTPWTLPANRAIAVHD 253

Query: 121 KLQYAVVEI--QSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +L Y +V     + L  ++      K  PG                  P +E        
Sbjct: 254 ELTYHLVRAGQDAFLVAENCLERVAKVLPG-----------------APEVE-------- 288

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           +  T+ G +L   RYV+ +  R       + GD++T  SG+GLVH APGHG +DY+  L 
Sbjct: 289 VLATVKGCELTRLRYVNVLRGRSAEPQPFMHGDFVTDGSGSGLVHCAPGHGFDDYLACLP 348

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P+ +PVD +G+FT+EA      +  G+ VL  G+ AV++ L + +  + +  Y HKY
Sbjct: 349 RGIPVSAPVDGDGRFTDEAFPDQPDRLRGISVLDGGSSAVLEILGDDVLDVHD--YRHKY 406

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTK+P I RAT QWFA V   + AA+ AIG+V++VP
Sbjct: 407 PYDWRTKQPIIIRATAQWFADVGTIKDAALAAIGKVRFVP 446



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 39/338 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S DYT D+++G  VL+ +     K R T++ L G++H      S     L
Sbjct: 663 GPDALRLWVASSDYTRDIVLGEPVLKTIHQALLKYRTTIKMLTGSMH-----RSARTAPL 717

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D+ AL QL +++  +   Y++++F K F  + R++  DLS FY +  KDRLY     
Sbjct: 718 TAVDEIALLQLGDVMDEVGRHYDAHEFNKAFGALNRWLANDLSAFYLEALKDRLYCADGG 777

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE-SKWPV 517
                    VL    +  +R++AP+ P L E+ W++ P     +D  A   + +  + P+
Sbjct: 778 G--------VLEPIFVGFLRMLAPVAPLLVEEAWEHRPQWLKDDDPDALHPLRQLYRAPL 829

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVL-EVARTGKLIGSSLEAKVYLFTDDASLASR 576
           +D    T    E+     +L       K   E AR  K++GSSL+  V L   +   A R
Sbjct: 830 IDPARLTRDPAELREAVPVLMAAHAAIKAASEPARADKVLGSSLQCHVVLEVPEGGRALR 889

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI------RNIPYSGEYLVEGKD-KVWI 629
           +       H+A+ L  +F++S VE+     NG +          Y  ++ ++G+  K W+
Sbjct: 890 I----LRAHEAE-LPAMFVVSSVEL-----NGAVGEEEKEEGWKYCQQFELDGQQCKAWV 939

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              R   +KC RCW Y            LC RC EV+ 
Sbjct: 940 LPPRQ--AKCPRCWRYVAP-----SEDELCGRCEEVVG 970


>gi|374625047|ref|ZP_09697464.1| isoleucine-tRNA ligase [Coprobacillus sp. 8_2_54BFAA]
 gi|373916330|gb|EHQ48078.1| isoleucine-tRNA ligase [Coprobacillus sp. 8_2_54BFAA]
          Length = 909

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 190/331 (57%), Gaps = 35/331 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G KPV+WSPSS +ALAE
Sbjct: 136 MEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGLKPVYWSPSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN A+ +N 
Sbjct: 196 AEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTTTPWTIPANLAICLNE 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
           +  YA++E                           K  +IV ++LV +L  K+  T+  +
Sbjct: 248 RYDYALIETT-------------------------KGKLIVLNELVDSLMEKFEITEYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAPG G +D+    KYGL
Sbjct: 283 IKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAPGFGADDFFVGQKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P    VD+ G   ++ G++     + D N  V   LDE   L+  E   H YP+DWRTKK
Sbjct: 342 PAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKLEFITHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           P IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 402 PIIFRATDQWFCSVDKIREKLLSEIDKVNWL 432



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 183/338 (54%), Gaps = 36/338 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 604 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 663

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 664 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 723

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY     S  RR  QTVL  H  +++++I+P+L   AE++  +    +  +D  A    
Sbjct: 724 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEELHDH----FHCDDNKADSIF 779

Query: 511 FESKWPVLDEKWRTFPVGEIY--FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            E    +++      P  +     + + LELR +V K LE  R  K+I S++EAKV +  
Sbjct: 780 LEPNVEMIN-----MPNSDQLKAHFDRFLELRKDVMKALEGLRNEKIIKSNMEAKVTI-- 832

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
              SL    +EM +   D   L+++FI+++VE++  +               +E  D  +
Sbjct: 833 ---SLKDEFKEMASMLAD---LKQLFIVAKVELVKDSS--------------LEEFDSAY 872

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V + EG +C RCWNY  +     E   LC RC+ V+
Sbjct: 873 IKVEKFEGHQCPRCWNYFDEDEMEGE---LCPRCHAVI 907


>gi|167755754|ref|ZP_02427881.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
 gi|167704693|gb|EDS19272.1| isoleucine--tRNA ligase [Clostridium ramosum DSM 1402]
          Length = 901

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 190/331 (57%), Gaps = 35/331 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G KPV+WSPSS +ALAE
Sbjct: 128 MEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGLKPVYWSPSSESALAE 187

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN A+ +N 
Sbjct: 188 AEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTTTPWTIPANLAICLNE 239

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
           +  YA++E                           K  +IV ++LV +L  K+  T+  +
Sbjct: 240 RYDYALIETT-------------------------KGKLIVLNELVDSLMEKFEITEYKV 274

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAPG G +D+    KYGL
Sbjct: 275 IKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAPGFGADDFFVGQKYGL 333

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P    VD+ G   ++ G++     + D N  V   LDE   L+  E   H YP+DWRTKK
Sbjct: 334 PAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKLEFITHSYPHDWRTKK 393

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           P IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 394 PIIFRATDQWFCSVDKIREKLLSEIDKVNWL 424



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 183/338 (54%), Gaps = 36/338 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 596 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 655

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 656 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 715

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY     S  RR  QTVL  H  +++++I+P+L   AE++  +    +  +D  A    
Sbjct: 716 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEELHDH----FHCDDNKADSIF 771

Query: 511 FESKWPVLDEKWRTFPVGEIY--FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            E    +++      P  +     + + LELR +V K LE  R  K+I S++EAKV +  
Sbjct: 772 LEPNVEMIN-----MPNSDQLKAHFDRFLELRKDVMKALEGLRNEKIIKSNMEAKVTI-- 824

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
              SL    +EM +   D   L+++FI+++VE++  +               +E  D  +
Sbjct: 825 ---SLKDEFKEMASMLAD---LKQLFIVAKVELVKDSS--------------LEEFDSAY 864

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V + EG +C RCWNY  +     E   LC RC+ V+
Sbjct: 865 IKVEKFEGHQCPRCWNYFDEDEMEGE---LCPRCHAVI 899


>gi|237734721|ref|ZP_04565202.1| isoleucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|365831385|ref|ZP_09372937.1| isoleucine-tRNA ligase [Coprobacillus sp. 3_3_56FAA]
 gi|229382049|gb|EEO32140.1| isoleucyl-tRNA synthetase [Coprobacillus sp. D7]
 gi|365261862|gb|EHM91763.1| isoleucine-tRNA ligase [Coprobacillus sp. 3_3_56FAA]
          Length = 909

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 190/331 (57%), Gaps = 35/331 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G KPV+WSPSS +ALAE
Sbjct: 136 MEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGLKPVYWSPSSESALAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN A+ +N 
Sbjct: 196 AEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTTTPWTIPANLAICLNE 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
           +  YA++E                           K  +IV ++LV +L  K+  T+  +
Sbjct: 248 RYDYALIETT-------------------------KGKLIVLNELVDSLMEKFEITEYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAPG G +D+    KYGL
Sbjct: 283 IKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAPGFGADDFFVGQKYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P    VD+ G   ++ G++     + D N  V   LDE   L+  E   H YP+DWRTKK
Sbjct: 342 PAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKLEFITHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           P IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 402 PIIFRATDQWFCSVDKIREKLLSEIDKVNWL 432



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 183/338 (54%), Gaps = 36/338 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 604 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 663

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 664 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 723

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY     S  RR  QTVL  H  +++++I+P+L   AE++  +    +  +D  A    
Sbjct: 724 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEELHDH----FHCDDNKADSIF 779

Query: 511 FESKWPVLDEKWRTFPVGEIY--FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            E    +++      P  +     + + LELR +V K LE  R  K+I S++EAKV +  
Sbjct: 780 LEPNVEMIN-----MPNSDQLKAHFDRFLELRKDVMKALEGLRNEKIIKSNMEAKVTI-- 832

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
              SL    +EM +   D   L+++FI+++VE++  +               +E  D  +
Sbjct: 833 ---SLKDEFKEMASMLAD---LKQLFIVAKVELVKDSS--------------LEEFDSAY 872

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           I V + EG +C RCWNY  +     E   LC RC+ V+
Sbjct: 873 IKVEKFEGHQCPRCWNYFDEDEMEGE---LCPRCHAVI 907


>gi|156035535|ref|XP_001585879.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980]
 gi|154698376|gb|EDN98114.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 952

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/343 (39%), Positives = 193/343 (56%), Gaps = 42/343 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +G+ ADW   + T+D  +E  Q+ VF +M  +G I+R  KPV+WSPSSRTALAE
Sbjct: 145 MKGFREWGIMADWEKAWKTMDKTFETKQLAVFQEMVKKGLIFRRYKPVYWSPSSRTALAE 204

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVA 117
           AELEY   H+S S Y  F +   P    G + +F+P+   L   +WTTTPWT+PAN A+A
Sbjct: 205 AELEYNNEHISTSAYIKFPITDIP----GEVRDFVPNLSKLSALIWTTTPWTLPANRAIA 260

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
            +  L Y++V                        K      II +S L    ++ +  K+
Sbjct: 261 FHQDLTYSIV------------------------KCDDDHLIIASSRLSALQDSCFKDKV 296

Query: 178 --VIKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
             V+++ + GS L N  Y + +   N     +I  D++++ESGTGLVH APGHG +DY  
Sbjct: 297 IEVVRQDIPGSVLRNLTYTNQLRGQNSDDQPLIHADFVSSESGTGLVHCAPGHGMDDYEV 356

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
             + G+  ++PVDD G FT+ A        SG  VL DGN+ V+K L +Q+  I +  Y+
Sbjct: 357 CTRLGIEAIAPVDDLGCFTDAALPDDPSALSGKSVLNDGNMEVLKILGDQVLFISK--YK 414

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWRTK P I RATEQWFA V   +  A++ +  V ++P
Sbjct: 415 HKYPYDWRTKLPVIVRATEQWFADVGDVKSVALERLNDVTFIP 457



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 161/338 (47%), Gaps = 35/338 (10%)

Query: 337 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYD 396
           G+GAD LRLWV+S DYT D++IG  VL  ++    K R T + LLG++H+     S    
Sbjct: 644 GFGADALRLWVASSDYTKDIVIGQPVLASVNSALSKYRITFKMLLGSMHE-----SARTS 698

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            +  +D+ AL QL  ++  +  +Y SY+F +    I R+I  DLS FY + +KDRLY G 
Sbjct: 699 PVTKLDKIALVQLRAVMSEVESAYNSYEFHRAVSAINRWIHTDLSAFYLEASKDRLYCGD 758

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA---EFVFES 513
                      VL      +++++ PI P L E+VW +LP     E        EF+   
Sbjct: 759 GGG--------VLEEIFHGLLKMLTPITPCLVEEVWNHLPAWMAAESPVHPFHREFLDTI 810

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
             P    +     + +   W  +LE  T +    E AR+ K+IGSSLE+ V +     +L
Sbjct: 811 ISPRRLSEEEIPSIEQDIPW--LLEAHTAIKLAQEEARSQKIIGSSLESSVLIDLPSKNL 868

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR-NIPYS--GEYLVEGKDKVWIG 630
               R        AD L+ IF++S VE+      G  R + P S  G +   G+ KVW  
Sbjct: 869 KVFERY-------ADELESIFVVSSVEIGGDVNRGDWRFSAPLSPPGWHEPGGEGKVW-- 919

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           V   +  KC RCW Y   V        LC RC  V A+
Sbjct: 920 VLPPKDKKCPRCWRYVAPVKD-----ELCGRCETVTAM 952


>gi|328954555|ref|YP_004371889.1| isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454879|gb|AEB10708.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 933

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 186/330 (56%), Gaps = 32/330 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPYLT+  +Y A  I  +G ++L G +YR KKPVHW  S  TALAEAE+
Sbjct: 142 FMRLGVLGDWFNPYLTMANDYAAQIIAEYGAIALAGGVYRSKKPVHWCASCHTALAEAEV 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E H + SI+  F ++        +L  +   + L +WTTTPWT+PAN A+AVN +  
Sbjct: 202 EY-EDHRTISIFVKFPLLDDLSGDYPVLTNY--PVFLIIWTTTPWTLPANLAIAVNPQFD 258

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA V++                          +   I+A DL   +    G K      +
Sbjct: 259 YAAVQV-------------------------GEEIYILARDLAAGVLGTLGLKGKEVAII 293

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
           +   LE  R  HP  +RQ  V++  DY+T E+G+GLVH APGHGQEDY +  +Y L   S
Sbjct: 294 SAQKLEGRRCRHPWIDRQSQVIL-ADYVTLEAGSGLVHIAPGHGQEDYESGRRYHLEAYS 352

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G+F  E  +F+GL V  D N  +++ L ++ +L+    + H YP+ WR K+P IF
Sbjct: 353 PVDDDGRFLPEVPEFAGLRVW-DANPGIIELLQQRGALLGASEFSHSYPHCWRCKQPIIF 411

Query: 304 RATEQWFASV--EGFRQAAMDAIGQVKWVP 331
           RATEQWF S+     R  A++AI QV+W+P
Sbjct: 412 RATEQWFISMGANNLRTRALEAINQVEWIP 441



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/361 (35%), Positives = 199/361 (55%), Gaps = 33/361 (9%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G +  + PQ+    YGA++LRLWVS+ DY  +V +  Q+L+Q+++ Y
Sbjct: 596 AVDGEGKKMSKSLGNI--IAPQDVIQEYGAEILRLWVSAEDYRDEVRLSDQILKQLTEAY 653

Query: 371 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R+LR T R+LLGNL D+      +S      +D+  L  L  +++ +RE+Y+ ++F  ++
Sbjct: 654 RRLRNTARFLLGNLFDFDPPRHYVSPQQREELDRLTLCWLAKLIQRVREAYDRFEFHVVY 713

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
             + +F  V+LS  Y D+ KDRLY     S  RRS Q+ L   LLS+  ++AP+L   AE
Sbjct: 714 HSLHQFCAVELSTLYLDILKDRLYISRPDSSERRSAQSTLYDLLLSLTTLMAPVLSFTAE 773

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFP-VGEIYFWGKILELRTEVNKVLE 548
           ++W  LP A         E V  S +P   E    FP    +  W  +L++R++VN+ LE
Sbjct: 774 EIWGYLPKA------PRPESVLLSDFP---EPPAGFPDAALVEKWELLLKIRSDVNRALE 824

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            +R  +LIG+SLEA+VY++     L  RLR   T + +  TL    ++S +EV P    G
Sbjct: 825 QSRRDRLIGNSLEAQVYIYA-TPDLFERLR---TQQPELLTLT---MVSHLEVKPGPGVG 877

Query: 609 L-IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           L  + +P            + I V RA G KC+RCW YS  VG     P LCSRC  +LA
Sbjct: 878 LESQELP-----------GLTIFVERARGDKCQRCWFYSPTVGEDARCPELCSRCRRILA 926

Query: 668 V 668
           +
Sbjct: 927 L 927


>gi|402857160|ref|XP_003893139.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Papio anubis]
          Length = 1007

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 190/331 (57%), Gaps = 30/331 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLVYRSYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   HVSRSIY  F ++   P  + L++   P +   VWTT PWT+PAN AV    +
Sbjct: 257 ELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFLVWTTQPWTIPANEAVCYMPE 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K S+ G++         ++A+D V T+ +          
Sbjct: 316 SKYAVV---------------KCSKSGDLY--------VLAADKVETVASTLEFSFP--- 349

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G DLEN    HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ LP+
Sbjct: 350 --TGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYGVASQHNLPM 407

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              VD++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 408 DCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKNLLKEEKLVHSYPYDWRTKKP 467

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   + AA + + +VK++P
Sbjct: 468 VVIRASKQWFINIADIKIAAKELLKKVKFIP 498



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 36/345 (10%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 394
            P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 684  PPYGADVLRWWVADSNVFTEVAIGPSVLNSARDDISKLRNTLRFLLGNVADFNPETDSIP 743

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 744  VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 803

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 804  EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 857

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 858  WISTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYKVIIVIEPGLL 907

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM  ++  + T  L  + + S+  +L   P  +  + I   G++L+  EG D    
Sbjct: 908  FEIIEMLQSEETSSTSQLNELMMASESTLLAQEPREMTADVIELKGKFLINLEGGDIREE 967

Query: 626  ---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
               KV +  +  E  KC RCW Y+ +        TLC RC EV++
Sbjct: 968  SSYKVIVMPTTKE--KCPRCWKYTAESSD-----TLCPRCAEVVS 1005


>gi|344296469|ref|XP_003419929.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Loxodonta
           africana]
          Length = 1012

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 190/331 (57%), Gaps = 25/331 (7%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           ++F R+G+ ADW+N Y T D +YEA Q+ +F +M  +G +YR  KPV WSPSSRTALAEA
Sbjct: 197 SAFTRWGIMADWDNCYYTFDKKYEANQLRIFYEMYEKGLVYRAYKPVFWSPSSRTALAEA 256

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   H+SRS+Y  F +    P  + LL+     + + VWTT PWT+PAN AV     
Sbjct: 257 ELEYNPEHISRSVYVKFPVSRPSPVLAPLLDGS-STVSVLVWTTQPWTIPANQAVCYMLD 315

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +YAVV               K +  G+V         I+A+D V ++ +   TK  +  
Sbjct: 316 AKYAVV---------------KCANSGDVY--------ILAADKVTSVASALETKFEVIS 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G+DLEN    HP+   +   ++   ++T   GTGLVHTAP HG EDY  + ++ L +
Sbjct: 353 TFLGADLENGTCTHPIFPDKVSPLLPASHVTVAKGTGLVHTAPAHGMEDYSVASQHSLSM 412

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
              V+++G FT+ AG +     VL +G   V+K L    +L+ EE   H YPYDWRTKKP
Sbjct: 413 DCLVNEDGIFTDGAGPELQNKAVLEEGTDVVIKMLQAAKNLLKEEKLVHSYPYDWRTKKP 472

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            + RA++QWF ++   +  A + + +VK++P
Sbjct: 473 VVIRASKQWFVNIADIKPTAKELLKKVKFIP 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 159/341 (46%), Gaps = 32/341 (9%)

Query: 336  PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 394
            P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGNL  +    +SI 
Sbjct: 689  PPYGADVLRWWVAESNVLTEVTIGPSALNAARDDINKLRNTLRFLLGNLSGFNPETDSIP 748

Query: 395  YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 454
              D+ ++DQY L  L+     I ESY+ Y F K+ +++Q F   +LSNFYF V KDRLY 
Sbjct: 749  TKDMYVLDQYMLHLLQGFANKITESYKQYDFGKVVRLLQAFYTRELSNFYFSVVKDRLYC 808

Query: 455  GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 514
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P+A           VF + 
Sbjct: 809  ESEDDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYA------KEPRSVFRTG 862

Query: 515  WPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
            W      W+             LE   E    +  +  G + G +      +   +  L 
Sbjct: 863  WINTSSIWKK----------PGLEEAVESACAMRDSFLGSIPGKNAAEYQVVIVIEPGLL 912

Query: 575  SRLREMCTAKHDADT--LQRIFIISQVEVLPSTPNGLIRN-IPYSGEYLV--EGKD---- 625
              + EM   +  + T  L  + + SQ  +L   P     +    +G +L+  EG D    
Sbjct: 913  FEIMEMLQTQETSSTSQLNELMMASQTTLLSQEPRERTADATELTGTFLINLEGGDIREE 972

Query: 626  -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
                + V  A   KC RCW Y+ +         LC RC EV
Sbjct: 973  SSYKVIVMPATKEKCPRCWKYTAESSD-----ALCPRCAEV 1008


>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 946

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/343 (42%), Positives = 195/343 (56%), Gaps = 47/343 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV ADW  PYLT+D  YEAA    F    L G I R +KPVHW  S  TALAEAE+
Sbjct: 140 FARLGVLADWQQPYLTIDYSYEAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVAVNA 120
           EY E H S SIY  F +  A  + +  + E   D   L + +WTTTPWT+PAN AVA++ 
Sbjct: 200 EYAEQH-SPSIYVKFPLAPA--TLAAAVPELAADQRPLAVVIWTTTPWTLPANLAVALHP 256

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT---KL 177
              YA VE                   G +L        I+A++LV  + A+ G    KL
Sbjct: 257 DFTYAAVE-----------------HDGEIL--------IMAAELVERVMAECGLSDYKL 291

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
           +     A    ++CR  HP+  RQ  ++I  DY+T ESG+G VHTAPGHG++DY++ LK+
Sbjct: 292 LASFPAAALLGQSCR--HPLLERQ-SLLIAADYVTLESGSGCVHTAPGHGRDDYLSGLKH 348

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            LPILSPVD+ G FT EAG + GL +L  GN  ++  L    +L+ E+   H YP+ WR 
Sbjct: 349 HLPILSPVDERGHFTGEAGPYEGLFIL-KGNKRIIADLQAGGALLGEQAITHSYPHCWRC 407

Query: 298 KKPTIFRATEQWFASVEG---------FRQAAMDAIGQVKWVP 331
           KKP +FRATEQWF +++           R+ A+ AI +V+W+P
Sbjct: 408 KKPVMFRATEQWFIAMDAAAGDDPEQTLRRRALAAIDEVEWIP 450



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 189/359 (52%), Gaps = 26/359 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    ++G V   P +    +GA++LRLW +S DY  D+ I   +LRQ++D YRK
Sbjct: 605 VDGQGKKMSKSVGNVI-APDKIIKQHGAEILRLWAASEDYRDDIRISENILRQLADAYRK 663

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
            R T+R++LGNLHD+    +    + +  +D++ L + E   +  +ESY+ ++F + +  
Sbjct: 664 TRNTIRFMLGNLHDFEPARHRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQ 723

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +  F  V LS  Y D+ KDRLY        RR  Q+VL      ++R++AP+L  LA + 
Sbjct: 724 LYNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEA 783

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF-WGKILELRTEVNKVLEVA 550
           W++LP      D      VF + +P    +      GE+   W KI+ +R+E+ + LE+A
Sbjct: 784 WEHLP-----ADDKRPASVFLADFPA--ARPERLADGELLARWEKIMAVRSELTRALEIA 836

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFII---SQVEVLPSTPN 607
           R  K+IG SL+A++ L    A+ +   R++  A  +  TLQ + I+   S  E +P+   
Sbjct: 837 RRDKVIGHSLDAEIQL----AATSGPWRDLIAA--NWQTLQEVTIVSVMSHAEAIPAAAE 890

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G    + Y GE + +    + + +  A G KC RCW  +  VG   EHP +C RC   L
Sbjct: 891 G---EVFYQGEEIAD----LQVLIRPAAGEKCARCWMRTAGVGEHSEHPGVCHRCAGAL 942


>gi|373114060|ref|ZP_09528277.1| isoleucyl-tRNA synthetase [Fusobacterium necrophorum subsp.
           funduliforme 1_1_36S]
 gi|371652947|gb|EHO18353.1| isoleucyl-tRNA synthetase [Fusobacterium necrophorum subsp.
           funduliforme 1_1_36S]
          Length = 486

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 40/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV   W +PYLTL P++EA Q+++FG++   GYI++G KP++WSP + TALAEAE+
Sbjct: 141 FIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFKGLKPIYWSPVTETALAEAEI 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S SIY   +      + + LL +  F  +  + +WTTTPWT+PAN A+++N +
Sbjct: 201 EYHD-HTSPSIYVKMK------ANADLLEKISFSEEAYVVIWTTTPWTLPANVAISLNPE 253

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
            +Y V                 K+  GN         +I+  +L  T  A+ G +   + 
Sbjct: 254 FEYGVY----------------KTEKGN---------LILGKELAETAFAEMGIEAPELL 288

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K   GS LE   Y HP  +R   +++ G ++T ++GTG VHTAPGHGQEDYV   +Y +P
Sbjct: 289 KEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMP 347

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I+SP++ +G  TEEAG  F+GL      N  ++++L E   L+  +   H YP+DWR+K 
Sbjct: 348 IVSPINYKGYLTEEAGPLFAGL-FYEKANKTIIEHLTEIGLLLKMKEITHSYPHDWRSKT 406

Query: 300 PTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 407 PVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440


>gi|373462942|ref|ZP_09554603.1| isoleucine--tRNA ligase [Lactobacillus kisonensis F0435]
 gi|371765762|gb|EHO54066.1| isoleucine--tRNA ligase [Lactobacillus kisonensis F0435]
          Length = 935

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 196/332 (59%), Gaps = 33/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+R GV  DW+NPYLTL PE+EA +I VFG  + +G IY+GKKPV+WS SS +ALAEA
Sbjct: 137 AEFRRLGVSGDWDNPYLTLKPEFEAQEIRVFGAFAKRGLIYKGKKPVYWSWSSESALAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +     + Y   ++V       G+L+    D  + VWTTTPWT+PA+  + V+A 
Sbjct: 197 EVEYHDVTSPTAFYGE-KVVDG----KGVLDN--NDTYMVVWTTTPWTIPASEGITVDAG 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK- 180
             Y+VV+     EG++                      ++AS+LV  +    G + V   
Sbjct: 250 FDYSVVQP----EGETR-------------------HFVIASELVNKVAELVGWQDVKTL 286

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           KT+ G +LE     HP D+ +  + + GD++  E GTGLVHTAPG+G++D+    KYGL 
Sbjct: 287 KTVKGQELEGVLAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTAPGYGEDDFNIGRKYGLD 346

Query: 241 ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           I +PVDD+G  T+E+GK F+G+    D N   +  L +   L+   P +H YP+DWRTKK
Sbjct: 347 IFAPVDDKGYLTKESGKDFAGV-FYDDANKIALDKLKDANLLLRYMPLKHSYPFDWRTKK 405

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 406 PIIFRATPQWFASVDKIKDDILKSLDDVEFFP 437



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 172/332 (51%), Gaps = 26/332 (7%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+RYLL N+ D+    + +++D 
Sbjct: 617 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRYLLANISDFDPKKDQVAFDQ 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY +  L   +   R+ YE Y F  + + +  FI  DLS FY DVAKD +Y    
Sbjct: 677 LETQDQYMMVLLNQFLAEARDCYEKYDFLDLNKKLISFIATDLSAFYLDVAKDIVYIDRK 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+    +++ +++ P+LPH AE++W   PF    E     EFV  +  P 
Sbjct: 737 DGHKRRSMQTVMYEAAVTLTKLMTPVLPHTAEEIW---PFLTEPE-----EFVQLTDIP- 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + K        +  W   ++ R +V KVLE AR  K IG S EAK+ ++       S +
Sbjct: 788 -EPKHFDNDAAILANWTTFMKYRDDVLKVLEGARDAKQIGKSSEAKLTIYA-----TSEV 841

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            E+  + H    L  + ++SQ+EV   T      + P +        D + + V +A G 
Sbjct: 842 SELLDSLH--TDLATVLMVSQLEVKDFT------DAPDNSTKF--DSDGLALLVEKAAGK 891

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
            CERC    T VG+  ++PT C  C E++  Q
Sbjct: 892 VCERCRLTKTDVGADTDYPTFCQSCAEIVRSQ 923


>gi|269122525|ref|YP_003310702.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616403|gb|ACZ10771.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 926

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 194/334 (58%), Gaps = 38/334 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R G+  +W NPY+TL PEYEA ++ VF ++   GYIY+G KPV+WSPS+ TALAEA
Sbjct: 140 AEFIRLGIMGEWENPYITLIPEYEAEELRVFKEIYNNGYIYKGLKPVYWSPSTETALAEA 199

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +  VS SIY             G     L +  + +WTTTPWT+PAN  ++++A+
Sbjct: 200 EIEYQDV-VSPSIYVKMDGEQDLKDKLG-----LDEAAIVIWTTTPWTLPANLGISLHAE 253

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVI 179
             Y V                 K+  GN+L         +A +L  T   E +     +I
Sbjct: 254 FDYGVY----------------KTEKGNLL---------LAKELAETAFKEMEIENYELI 288

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
           K+ + G++L+N  Y HP  +R   V++ GD++T E+GTG VHTAPGHG +DY+   KY +
Sbjct: 289 KE-VKGAELDNTHYKHPFIDRTGLVML-GDHVTLEAGTGAVHTAPGHGVDDYLVGQKYNI 346

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            ILSP+DD+G FT+  GK+ G+      N  + + +     L+ME+  +H YP+DWR+KK
Sbjct: 347 GILSPIDDKGHFTKAGGKYEGM-FYKKANKFISEDIKASGHLLMEKELKHSYPHDWRSKK 405

Query: 300 PTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           P I+RATEQWF  VE    R+ A+  +  V ++P
Sbjct: 406 PVIYRATEQWFIRVEEGDLREKALTVLKDVNFIP 439



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 192/337 (56%), Gaps = 27/337 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGAD+LRLWV+SVDY  DV I   +L+Q+SD YR++R T R++LGN+ D+   
Sbjct: 614 PSEIINQYGADILRLWVASVDYREDVRISDNILKQVSDSYRRIRNTARFILGNISDFDYK 673

Query: 391 NS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
           N  +S++D+  +D++AL +LE +   + E YE Y+F+ +F  IQ F  +++S FY D+ K
Sbjct: 674 NDKVSFEDMYEVDKWALNKLERLKNKVEEYYEKYEFYNLFNEIQYFCGIEMSAFYLDIIK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLY   T S  RRS QTV+   L  +VR IAP+L   AE++W+ +P     E     E 
Sbjct: 734 DRLYVEKTDSKLRRSAQTVMVEILEFLVRAIAPVLSFTAEEIWEKMP-----ETLREEES 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           V  ++W     ++    + E   W KI++LR EV + +E  R  K +G SL+AKV LF D
Sbjct: 789 VHLAQWVAAKPEYLDNALDEK--WSKIMDLRKEVYREVEKVRQEKTVGLSLDAKVELFID 846

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
           +               + + LQ  FI+SQ+       +G+  +   SG         + +
Sbjct: 847 NKDFE------FIKDININDLQDYFIVSQIHF--GETDGMA-DTEISG---------IKV 888

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V++A+G KCERCW Y  ++G+  E+P +C RC +VL
Sbjct: 889 KVTKADGEKCERCWKYD-ELGTDPEYPDVCPRCAKVL 924


>gi|167522938|ref|XP_001745806.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775607|gb|EDQ89230.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1051

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 190/328 (57%), Gaps = 35/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW  PY+T+ PEYEAAQ+++F  M  QG +YR   PV WSP S+TALAEAE+
Sbjct: 203 FKRLGILADWERPYITMTPEYEAAQLKLFHHMLDQGLVYRRFCPVQWSPQSQTALAEAEV 262

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA--VWTTTPWTVPANAAVAVNAK 121
           EY + H S S Y  F +++ P  T        PD  +A  +WTTTPWT+ AN A+A N  
Sbjct: 263 EYYD-HTSTSAYVRFPLINRPTGTD-------PDTPIAALIWTTTPWTLLANQALAFNPG 314

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L+Y +V                  RP      +    +++A D +  L       L + +
Sbjct: 315 LRYVLV------------------RP----TPEAHELLLIAYDRLEALRQTLQQPLDVIQ 352

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            +  + L + +  HP+ +R  P  I GD++T+++GTG+VHTAP HG ED+    + G+ +
Sbjct: 353 DVPATALGDLQAQHPLHSRTIP-FIAGDHVTSDAGTGVVHTAPAHGVEDFRACQRVGIDV 411

Query: 242 -LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
             + VD  G++ + AG + +GL+VLG+GN  V+  L+   SL+  E Y+H+YPYDWRTK 
Sbjct: 412 EFNLVDGRGRYRDAAGPQLAGLEVLGEGNTTVLGQLEAAGSLVHREAYQHRYPYDWRTKT 471

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQV 327
           P +FRAT QWFA +    + A DA+  V
Sbjct: 472 PLLFRATRQWFADLRHIGEHARDALADV 499



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 148/285 (51%), Gaps = 25/285 (8%)

Query: 333 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL--HDWRVG 390
           ++ P YGAD LRLW +SVDYT DV IGP  LR   +  RK+R  LR++ GNL   +  + 
Sbjct: 648 KQEPAYGADTLRLWAASVDYTNDVSIGPNTLRITHENLRKIRNALRFMHGNLGAAEPALA 707

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +  +  +LP ++ Y +  L +   +++ +Y+ + F ++ QI   FI  +LS FYF++ KD
Sbjct: 708 SGSAIVELPSLEAYLMHLLADYEGSVKAAYDQHNFLRVHQITLNFIQTNLSGFYFEIIKD 767

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF- 509
           RLY GG  S +  +  TVL   L +  + +APIL H  E+ ++ +   Y    G+A+E  
Sbjct: 768 RLYAGGQDS-SYLATLTVLRHMLTAFEQALAPILVHTIEESYE-ISKTY----GAASEAH 821

Query: 510 --VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR-TGKLIGSSLEAKVYL 566
             V    W    E W    +GE +    + ELR EV ++++  R TG + G S +A+V +
Sbjct: 822 SSVMLRPWTSFAE-WHQPALGERF--DAVRELRREVFRLVQATRETGAIKGGS-DARVSV 877

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVE----VLPSTPN 607
                 L S    +     D D L  + ++SQ       LPS  N
Sbjct: 878 -----RLPSATGRLVYEALDHDALTEVLLVSQTSFARAALPSYQN 917


>gi|242279474|ref|YP_002991603.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511501|sp|C6BV89.1|SYI_DESAD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|242122368|gb|ACS80064.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 937

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 193/341 (56%), Gaps = 46/341 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W +PYLT+ PEYEAA     G+   +G + RGKKP+HW    RTALAEAE+
Sbjct: 141 FKRLGVLGNWEDPYLTMKPEYEAATARELGRFMEKGSVIRGKKPIHWCCDCRTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---------LAVWTTTPWTVPANA 114
           EY E H S SIY  F     P +   +L     D+          + +WTTTPWT+P N 
Sbjct: 201 EY-EDHTSPSIYVRF-----PLNDEKVLKALPEDVASKVDLSRTYVCIWTTTPWTIPDNM 254

Query: 115 AVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG 174
           AVAV+ + +YAV E+     GD                       I+A  L+P     +G
Sbjct: 255 AVAVHPEFEYAVTEVN----GD---------------------IYILAERLLPVCAESFG 289

Query: 175 -TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
                +  T+AG+ LE     HP+ +R+ PVV+  DY+T +SGTG VHTAPGHG+ED+ T
Sbjct: 290 WESWNVLATVAGAKLEGAVAKHPIYDRKSPVVL-ADYVTLDSGTGCVHTAPGHGREDFET 348

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
            LK GL + SP+++ G F +E   F+G++V  + N  V++ L+E  +L+ +E   H YP+
Sbjct: 349 GLKNGLEVYSPMNNSGVFLKEVEFFAGMNVW-EANPKVIEKLEEVGNLLAQEKISHSYPH 407

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
            WR K+P IFRAT QWF  +E    R+ A+ AI   V+W+P
Sbjct: 408 CWRCKEPVIFRATTQWFIGMEENDLRKKALKAIKDDVEWLP 448



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/347 (35%), Positives = 189/347 (54%), Gaps = 28/347 (8%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           +IG V  + PQE    +GA++LR+WVS+V+Y  DV I  ++L +M D YR++R T RY+L
Sbjct: 616 SIGNV--IAPQEIIDQHGAEILRMWVSAVNYQEDVRISDEILSRMVDTYRRVRNTCRYIL 673

Query: 382 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
           GNL  +    ++++  D+  ID +AL  +    + I+++Y +++F K++  +      +L
Sbjct: 674 GNLDGFNPETDAVAPADMLPIDHFALDLVNRQHEVIQKAYTNFEFHKVYHTLHNLCTTEL 733

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
           S FY D+ KDRLY  G  S  RRS QTVL   +L +++ +APIL   AE+ + ++P    
Sbjct: 734 SAFYLDIIKDRLYVSGEKSLERRSAQTVLWQTMLMLLKDMAPILSFTAEEAYSHMP---- 789

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
            E   +AE VF  +  +L     +    E   W  ++++RTEV K +E  R  K+IG SL
Sbjct: 790 EEMKGSAETVFAIRPELLKP---SIDDAERKRWELLMDVRTEVTKAIEPLRREKVIGHSL 846

Query: 561 EAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYL 620
           + K+ LF ++  +A  L  +          +  FI+S VE+ P          P   E L
Sbjct: 847 DTKITLFANE-EIAKALEGI--------ERREFFIVSGVEIKPLAEASDDAVKPEELEGL 897

Query: 621 VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                   I V +A+G KC RCW Y T +G+  EHP LC RC  VLA
Sbjct: 898 S-------IKVEKAQGEKCSRCWRYDT-LGTNAEHPELCPRCAAVLA 936


>gi|425773281|gb|EKV11642.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
 gi|425778928|gb|EKV17029.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
          Length = 997

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 196/341 (57%), Gaps = 35/341 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+   V ADW N + T+D ++E  Q+ +F  M  +G IYR  KPV+WSPS+ TALAE
Sbjct: 147 MKVFRGCAVMADWENHWKTMDKQFEMRQLGIFRGMVDRGLIYRKFKPVYWSPSTSTALAE 206

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAV 118
           AELEY + H+S +    F +V  P   S   N  L   D+   +WTTTPWT+PANAA+AV
Sbjct: 207 AELEYKDDHISTAALVRFPLVDIPTHLSE--NPLLRGKDVSAVIWTTTPWTLPANAAIAV 264

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +  L+Y +V                  + G++L  Q + F  + S L   L        V
Sbjct: 265 SESLEYTIV---------------LSEKHGHLLIAQAR-FEYLQSMLKEDLS-------V 301

Query: 179 IKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           I  ++ GS+L       P+      Q   +   D++T +SG+G+VH APGHG +DY   L
Sbjct: 302 IVPSILGSELAEQTTYRPLFKGPEAQPQPIFAADFVTADSGSGMVHCAPGHGMDDYEACL 361

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
             G+P+ +PV+DEG+FT++A      + +G  VLG+GN AV+++++    L+ +  YEHK
Sbjct: 362 ARGIPVFAPVNDEGQFTDKAMPLDPTRLAGKPVLGEGNTAVLEWVESCGQLLAQHKYEHK 421

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 422 YPYDWRSKLPIIVRATEQWFADVADIRTSALRALEDVRFVP 462



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 17/340 (5%)

Query: 331 PPQEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW 387
           P  + P Y   G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+
Sbjct: 666 PENQEPVYDALGPDALRMWAASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALADF 725

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
             GN + Y  L ++D+ AL  L ++V   +++ ++++F+K    + R+  ++ S FY + 
Sbjct: 726 HPGNIVPYGRLQLVDRIALKHLSDMVLASQKACDNFEFYKGVSTMNRWANLEFSAFYMEA 785

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLYT G  S +RR+ QT L      +   + PI P L E+ W++ P +   +     
Sbjct: 786 IKDRLYTLGEDSTSRRAAQTTLFYIYNHLQEALGPITPVLVEETWEHTPESIRTQSEHPL 845

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
             +  +  P    +W+   +   Y   ++  + + +  + E AR+ K +GSSL++ V+L 
Sbjct: 846 RRIVSAPAP----EWQDIALDTTY--QELTVVHSAIKTLQEQARSKKQLGSSLQSFVHLV 899

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE-GKDK 626
               S +   ++  +   D   +  I + S  E LP+     I N  +  E + E G   
Sbjct: 900 L--PSNSELFQQYLSELPDLFIVSSITLGSPSEALPAE----INNAEWQYEEIFELGGQP 953

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V   + SKC RCW Y+      +E+  +C RC  V+
Sbjct: 954 GKVYVYAPQASKCPRCWRYAIPEPVAIEN-AICDRCDAVI 992


>gi|430742258|ref|YP_007201387.1| isoleucyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
 gi|430013978|gb|AGA25692.1| isoleucyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
          Length = 956

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/332 (42%), Positives = 181/332 (54%), Gaps = 31/332 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW+NPYLTLDP YEA  ++V   +   GY++R  KP+HW  + RTALAEAEL
Sbjct: 145 FRRLGVSGDWDNPYLTLDPRYEAGILDVLADLLAGGYVFRQLKPIHWCMNDRTALAEAEL 204

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F +VS  P+  G            VWTTTPWT+PAN A+A +  L 
Sbjct: 205 EYRD-ESSPSIYVNFPIVSGVPAAWG-----TGPWHAMVWTTTPWTLPANVAIAAHPDLN 258

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  V       G +                   +  I+A+DL+P + A  G T++     
Sbjct: 259 YVGVRYVDPESGQA-------------------LQTILAADLLPKVMALRGVTEIQELGR 299

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G DLE+ +Y HP   R  P+V+   Y+T E GTGLVHTAPGHG EDY T   Y LP L
Sbjct: 300 CRGKDLEHAQYRHPFIERTSPIVL-AQYVTVEDGTGLVHTAPGHGTEDYQTGRTYQLPTL 358

Query: 243 SPVDDEGKFTEEA-GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           SPVD  G+FT+EA     G  V    N  ++  L E+  L  E  + H YP+ WR KKP 
Sbjct: 359 SPVDGSGRFTDEAPAALVGKGVF-KANPEIIALLRERGYLYHEFSFVHSYPHCWRCKKPV 417

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRATEQWF  V+    R   +  I  V+W+P
Sbjct: 418 IFRATEQWFIGVDRNDLRARTLKEIDSVRWLP 449



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 191/343 (55%), Gaps = 32/343 (9%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN--SISY 395
           YGADVLRL+V+S+DY  D+ +  + +++MS+ YRK+R T RY+LGNL D+   +  S+  
Sbjct: 629 YGADVLRLYVASMDYADDIRMSEKGIKEMSEAYRKIRNTFRYMLGNLEDYASFDPASVPS 688

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
           + L  ID++AL QL+ +  +++ +YE ++F+++FQ I +F  V+LS+FY DV KDRLY  
Sbjct: 689 ESLHEIDRWALRQLDEVASDVKGAYERFEFYRVFQRIYQFCSVELSSFYLDVLKDRLYAE 748

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 515
                 RR+ Q VL+     + R++AP++PH AE++W+ +P     +  +    V  + W
Sbjct: 749 LPQGPDRRAAQFVLAKLHDVLTRLLAPLVPHTAEELWELIP-----DSPAKVPSVHLAAW 803

Query: 516 PVLDEKWRTFPVG----EIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
           P  +      P G        W  +L  R  + +  E  R GK IGS+ EA V L+TD +
Sbjct: 804 PEAE------PSGTAAESAIPWKDLLVYRALILRETESLRKGKKIGSNQEASVELYTDSS 857

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP----YSGE--YLVEGKD 625
             A  L          D L  I I+++++V+     G I N+     + G+  +LV+ + 
Sbjct: 858 ETAEFLTRY------RDLLTTICIVAEIDVVRV---GQIENVQSEQGWVGDETHLVDLEH 908

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           ++ I   ++   KCERCWN    VG   EHP LC RC  V++ 
Sbjct: 909 RLVIRALKSPAGKCERCWNLRPTVGQSAEHPGLCDRCAGVMSA 951


>gi|395242178|ref|ZP_10419177.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
 gi|394480539|emb|CCI85417.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
          Length = 925

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 202/331 (61%), Gaps = 36/331 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R GV ADW++PY+TL PE+EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEA
Sbjct: 137 ADFMRLGVMADWDHPYITLQPEFEAEEIRVFGEMYKKGYIYKGKKPVYWSWSSESTLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   + +IY  F++        G+L++   D    +WTTTPWT+PAN A+ VN K
Sbjct: 197 EVEYKDVE-ANTIYVAFQVKDG----KGILDD---DTYFIIWTTTPWTIPANEAICVNPK 248

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
             Y VV++     GD                       +VA  L+ T+  + G     + 
Sbjct: 249 FVYDVVKV-----GDKK--------------------YVVADGLLTTVAEQIGWENYEVV 283

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           K+L G++LE     HP+ +R+  ++I G ++T + GTGLVHTAPG G++DY    KY LP
Sbjct: 284 KSLKGAELEYMTAKHPLFDRES-LLIEGLHVTLDGGTGLVHTAPGFGEDDYNVGKKYDLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           I SPVD++GKFT+E  + +G+    D +  +VK L+E  +L+  +   H YP+DWRTKKP
Sbjct: 343 IFSPVDNQGKFTDEIPELAGM-FYQDVDELMVKKLEEAKALLKLKKIVHSYPHDWRTKKP 401

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS+  FRQ  +D I +  +VP
Sbjct: 402 VIFRATTQWFASISSFRQEILDEIEKTNFVP 432



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L Q ++ YRK+R T RY+L N  D+    N ++Y+D
Sbjct: 612 GAEIIRLWVAQADTTSDVAVSYDILNQAAESYRKIRNTFRYMLANTSDFEPATNRVAYED 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L ++V +   +Y+ + F  +F+ +  FI  DLS FY D AKD LY    
Sbjct: 672 LRSVDQYMEVKLNDLVADCLAAYDKFDFNTVFKKVFNFISNDLSAFYLDFAKDVLYIEAA 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +++ PILPH  E++W     AY  ED    +FV  +  P 
Sbjct: 732 DSKARRSMQTVIYDAAVKLDKILTPILPHTMEEIW-----AYLKED---EDFVQLANMPE 783

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++       + E   W K + +R ++ K LE AR  KLIG S EA V ++ DD S     
Sbjct: 784 VETYTNHDELLE--NWQKFMAIRDDILKALEAARNDKLIGKSFEADVTIYPDDES----- 836

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                   DAD  + I I+S++ ++    +       Y  E+L        + V  A+G 
Sbjct: 837 -RKVLDNLDAD-FREILIVSKLTIIQE--DAPAEATKY--EHLA-------VEVKHADGE 883

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +C RC      +G+    PT+C RC +++
Sbjct: 884 ECPRCRMIRNDIGADEALPTICGRCAKIV 912


>gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082332|sp|B0TJA9.1|SYI_SHEHH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 940

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 195/332 (58%), Gaps = 28/332 (8%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV+ADW NPYLT+D   EA  +    ++   G++++G KPVHW     +ALAEAE+
Sbjct: 141 FIRLGVFADWQNPYLTMDFSTEANIVRSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY E  +S +I   F  V      +   L ++  ++ + +WTTTPWT+PAN A+AV A +
Sbjct: 201 EY-EDKMSPAIDVAFTAVDKSALLAKFGLADYAHNISMVIWTTTPWTLPANRALAVAANV 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
           +Y +VE+                     +KD +   +++A+DL  +   ++G +   +  
Sbjct: 260 EYTLVEM---------------------VKDGQTQALVLATDLYESCIERFGAESHTVLG 298

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+AGSDLE  R+ HP  +   PV++G D++T +SGTG+VHTAPGHGQ+D+V   KYGL +
Sbjct: 299 TVAGSDLELLRFNHPFYDFDVPVILG-DHVTVDSGTGVVHTAPGHGQDDFVVGQKYGLEV 357

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            +PV D G +  +   F+GL V    N  VV+ L+E+ +L+     +H YP+ WR K P 
Sbjct: 358 ANPVGDNGVYKPDTEIFAGLHVF-KANKNVVELLEEKGALLSHVQIKHSYPHCWRHKTPI 416

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRAT QWF S++  G R  A+  I Q KW+P
Sbjct: 417 IFRATPQWFISMDQKGLRTQAISEIEQTKWIP 448



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 202/358 (56%), Gaps = 36/358 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  Q+L + +D Y
Sbjct: 598 TVDGQGRKMSKSVGNV--ISPQHVTNKLGADILRLWVAATDYSGEMTVSDQILNRSADAY 655

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R++R T R+LL N++ +  V + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFDPVSDMVAIEDMVALDRWVVRRAAALQQELLEAYDEYNFHLVT 715

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKGDSNARRSCQSALYLISEAMVRWIAPILSFTAD 775

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIY---FWGKILELRTEVNKV 546
           ++W+ LP       G   E+VF   W    E  ++  +       +W ++L +R EVNKV
Sbjct: 776 EIWKLLP-------GERGEYVFTETWY---EGLKSITLESDLSDEYWDQLLAVRAEVNKV 825

Query: 547 LEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV--LPS 604
           +E AR  K IG SLEA+V LF DDA L++ L ++       D L+ + + S+ EV  L +
Sbjct: 826 IENARREKQIGGSLEAEVTLFADDA-LSAVLEKL------GDELRFVLLTSKTEVVALAA 878

Query: 605 TPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            P+  I      G  L   K    + + ++E  KCERCW++   VG+  EHPTLC RC
Sbjct: 879 APSDAI------GTELASLK----LSLKKSEAEKCERCWHHREDVGTVTEHPTLCVRC 926


>gi|342218617|ref|ZP_08711227.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 135-E]
 gi|341589487|gb|EGS32762.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 135-E]
          Length = 931

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 197/334 (58%), Gaps = 37/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R+GV  DW NPYLTL    E  QI VFG+M+ +G+IY+G K V+W P   TALAEAE+
Sbjct: 140 FIRFGVLGDWENPYLTLQHHIEVEQIGVFGKMAKKGHIYKGMKTVYWCPHCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMV---SAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           EY +   S S++  F+ V   +A P  + L N +       +WTTTPWT+P N A++ NA
Sbjct: 200 EYKDDK-SFSLFVKFQAVQVGTALPKGADLKNVYA-----LIWTTTPWTIPCNLAISANA 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
              Y  V I     G+             +L  Q +V +++ +  +   E       V+ 
Sbjct: 254 AFTYVWVRI-----GEEY-----------LLMAQDRVAVVMEAAHITDYE-------VLP 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           +TL G D+++  + HP+  R  P+++G +++T ++GTGLVHTAP HGQ+D+    + G P
Sbjct: 291 ETLTGEDIKSFVFRHPLYERNSPILLG-EHVTLDAGTGLVHTAPDHGQDDFDVCKQSGKP 349

Query: 241 ILSP---VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            L P   VD  G++T +  ++ G+ V  D NV V+K L    +L  +E + H+YP+ WR 
Sbjct: 350 ELQPLGTVDSSGRYTNKVPRYEGVFVF-DNNVPVIKDLAAVNALFAKETFRHQYPHCWRC 408

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           K+P I+RATEQWF+SV+G+RQ A+ AI  V+W+P
Sbjct: 409 KEPIIYRATEQWFSSVDGYRQEALQAIDNVQWIP 442



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/360 (35%), Positives = 202/360 (56%), Gaps = 30/360 (8%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           RK+R T RYLLG+L D+    ++++YD L  +D++AL +LE +++++ ESYE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGSLADFDPQRDAVAYDQLTDLDKWALMRLEEVIESVTESYETYQFHVMY 714

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
             I  F  +DLS  Y D+ KDRLYT    +  RRS QTV+   L+++V++ AP+L   AE
Sbjct: 715 HTIHNFCTIDLSAVYLDIIKDRLYTEKQDALLRRSAQTVMYEVLMTLVKITAPVLSFTAE 774

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           +VWQ +P  +        E V  + WP    ++    +     W   L  R ++ + LE 
Sbjct: 775 EVWQFMPVGF-----KDKESVHLTDWPKAHPEYIQKDIAT--RWDTFLSYRQDMMRALEK 827

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR  K IG +L+A+V L+    +           K   D L  + I+S   ++       
Sbjct: 828 ARQDKTIGHALDAEVTLYATGKTYD-------FLKDWQDQLATLLIVSNATLVQGK---- 876

Query: 610 IRNIPYSGEYLVEGKD--KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                 + E  ++G++  ++ + V  +  +KCERCW +S  VG    HPTLC+RC  VLA
Sbjct: 877 ------APEKAIQGEEHPELVVVVQASTHAKCERCWTHSKTVGVDPNHPTLCARCASVLA 930


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 196/341 (57%), Gaps = 44/341 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW +PYLT  P YEA  +EVF QM L G +YRG+KP+HW     TALAEAE+
Sbjct: 143 FKRLGVNADWEHPYLTFTPNYEAGNVEVFKQMYLDGLVYRGRKPIHWCKRCHTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SI+  F+M   P    T+G       D  + +WTTTPWT+PAN AV++   
Sbjct: 203 EYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIWTTTPWTLPANTAVSLAPD 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVI 179
             Y +V+         A  +N                +I+A +LV  +   A W +  ++
Sbjct: 258 ADYVMVQ---------ADGSN----------------MIMARELVEQVAEIAGWESYDLV 292

Query: 180 KK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           +        L G +     Y  PV       +I GD++T +SGTG VHTAPGHGQ+DY+ 
Sbjct: 293 RGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDSGTGAVHTAPGHGQDDYLV 352

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L E+ +L+ ++   H YP+
Sbjct: 353 ALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWLRERGTLVAQKEILHSYPH 411

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
            WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 412 CWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 33/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 396
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A     G        + WP
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQAMRERAGRPTNVQL-AGWP 813

Query: 517 VLDEKWRTFPV-GEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
              +     P  GE     +G I+ +R  V K LE AR  K++  S EA V +    A L
Sbjct: 814 KASDFAPAIPADGERVSEDFGVIMGVREVVTKALEDARGQKVVNKSQEAAVVVTAPRAVL 873

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            +        ++DA   + +FI++ V                      EG +++   VS+
Sbjct: 874 DA------VERYDAAVFEELFIVASVS-------------------FAEG-EELAATVSK 907

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            E  KC RCWN+   +G    H ++C RC + L
Sbjct: 908 TEAEKCPRCWNHRA-LGGNANHGSVCERCGDAL 939


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 196/341 (57%), Gaps = 44/341 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW +PYLT  P YEA  +EVF QM L G +YRG+KP+HW     TALAEAE+
Sbjct: 143 FKRLGVNADWEHPYLTFTPNYEAGNVEVFKQMYLDGSVYRGRKPIHWCKRCHTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SI+  F+M   P    T+G       D  + +WTTTPWT+PAN AV++   
Sbjct: 203 EYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIWTTTPWTLPANTAVSLAPD 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVI 179
             Y +V+         A  +N                +I+A +LV  +   A W +  ++
Sbjct: 258 ADYVMVQ---------ADGSN----------------MIMARELVEQVAEIAGWESYDLV 292

Query: 180 KK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           +        L G +     Y  PV       +I GD++T +SGTG VHTAPGHGQ+DY+ 
Sbjct: 293 RGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDSGTGAVHTAPGHGQDDYLV 352

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L E+ +L+ ++   H YP+
Sbjct: 353 ALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWLRERGTLVAQKEILHSYPH 411

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
            WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 412 CWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 33/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 396
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A     G        + WP
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQAMRERAGRPTNVQL-AGWP 813

Query: 517 VLDEKWRTFPV-GEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
              +     P  GE     +G I+ +R  V K LE AR  K++  S EA V +    A L
Sbjct: 814 KASDFAPAIPADGERVSEDFGVIMGVREVVTKALEDARGQKVVNKSQEAAVIVTAPRAVL 873

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            +        ++DA   + +FI++ V                      EG +++   VS+
Sbjct: 874 DA------VERYDAAVFEELFIVASVS-------------------FAEG-EELAATVSK 907

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            E  KC RCWN+   +G    H ++C RC + L
Sbjct: 908 TEAEKCPRCWNHRA-LGGNANHGSVCERCGDAL 939


>gi|339624589|ref|ZP_08660378.1| isoleucyl-tRNA synthetase [Fructobacillus fructosus KCTC 3544]
          Length = 932

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/333 (42%), Positives = 191/333 (57%), Gaps = 40/333 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW++PY+TL PEYEAAQ+ VFG+M+ +GYI++G KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVLADWDHPYITLQPEYEAAQLRVFGEMAKKGYIFKGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   +   YA     +      G+L+    D  L VWTTTP+TV A+  V V     
Sbjct: 199 EYHDLKSTSLFYA-----NRVKDGKGVLDN---DTYLVVWTTTPFTVTASRGVTVGPDFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VA DL+ T+  K+G     + + 
Sbjct: 251 YVVVK-----------PAGQDKK------------YVVAKDLLETVAPKFGWEDYEVLEE 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS+LEN    HP D     VV+ GD++T +SGTGLVHTAPG G++DY  S  YGL + 
Sbjct: 288 HKGSELENITAYHPWDKDVDEVVMVGDHVTLDSGTGLVHTAPGFGEDDYNVSKPYGLEVA 347

Query: 243 SPVDDEGKFTEEAG-KFSGL---DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
             VD++G  T+ AG  F G    DV G     V+  L E    + +E   H YP+DWRTK
Sbjct: 348 VTVDEKGMMTKSAGPDFEGRFYDDVTG----TVITKLQEAGLFLAKESITHSYPFDWRTK 403

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP I+RA  QWFAS++GFRQ  +D +  V + P
Sbjct: 404 KPIIWRAVPQWFASIDGFRQEILDQLDNVNFYP 436



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 39/345 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +     G ++LRLW  +VD + D+ +  ++L+Q++D YRK+R T+R+LL N  D+   
Sbjct: 608 PAEVGDQLGVEILRLWTITVDTSQDMPVSQEILKQVADSYRKIRNTMRFLLANTSDFNYA 667

Query: 391 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +++ ++     D+YA   L +++K I E+Y +Y+F  +F  +  FI VDLS FY DVAK
Sbjct: 668 KDAVPFEKREAHDKYATIVLNDLIKGIEEAYANYRFNDVFSKLINFINVDLSAFYLDVAK 727

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLEDG 504
           D +Y     S  RRS QTV    + ++ ++I P+LPH AE++W  LP     FAY  +  
Sbjct: 728 DVVYVEAPDSKQRRSMQTVFYETVQALTKLILPVLPHTAEEIWTYLPDDSTKFAYLQDMP 787

Query: 505 SAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKV 564
            A EF   +    +  KW+T           I  +R+  NK +E+AR   LIG + EA +
Sbjct: 788 EAKEFPEAAD---IKSKWQT-----------IFAIRSAANKAIEMAREANLIGKNAEAAM 833

Query: 565 YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGK 624
            L+  D  LA       T +     L+ + ++SQ+++  S+               V   
Sbjct: 834 TLYLSDEQLA-------TVEALGLDLRLMLMVSQLDLKKSS----------EAPADVPSF 876

Query: 625 DKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           D V I V +A G    R   Y   +G+    P L    YE   V+
Sbjct: 877 DGVQIQVEKARGGLSPRDRRYHEDLGADSAFPELA--AYEAKIVR 919


>gi|164428683|ref|XP_964746.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
 gi|157072240|gb|EAA35510.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
          Length = 962

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 193/340 (56%), Gaps = 36/340 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V +DW N + T+D  +E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 135 MDSFRTYAVMSDWENRWTTMDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S Y  F +        G L  F  +L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNEAHISKSAYVRFPITKDSARIPG-LEGFTGNLYAVIWTTTPWTLPANRAIAVHD 253

Query: 121 KLQYAVVEIQSLLEGDSA--APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
            L Y  V +     GD A         R   VL  ++    I+A                
Sbjct: 254 DLLYHAVRV-----GDDAYLVAEGGLERVAKVLMGEEGTPEILA---------------- 292

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
              T+ GS L   +YV+P+  +       I G ++T +SG+GLVH APGHG +DY+    
Sbjct: 293 ---TVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKD 349

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P+ +PVD++G FTEEA      +  G+ VL  G+ AV++   + +  + +  Y+HKY
Sbjct: 350 LGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHK--YKHKY 407

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 408 PYDWRTKKPIIIRATAQWFADVDNIKELALKALEEVKFVP 447



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 649 PPKDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 701

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S     L  +D  AL QL++ +  I   Y++Y+F K F  + R+I  DLS FY +  KD
Sbjct: 702 QSARAAPLTALDHIALVQLKDAMVEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKD 761

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY              VL    +  +R++API P L E+ W++ P A+  ED S    +
Sbjct: 762 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRP-AWMKEDPSILHPL 812

Query: 511 FE-SKWPVLDEKWRTFPVGEIYFWGKIL-ELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            +    P++D    ++  G +     +L E    +    E+AR GK++GSSL   V +  
Sbjct: 813 HQLYNSPLIDSSRLSYDEGVLRKDIPVLMETHAAIKAASELARRGKVLGSSLGCSVVIKA 872

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP---YSGEYLVEGKD 625
              S A     +   +   D L  +F++S V++      G I   P   Y  ++ + G  
Sbjct: 873 PKDSKA-----LSVLQKYKDELDTMFVVSSVDL-----GGAIEGEPAWKYVQDFEMGGHG 922

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + W  V   +  KC RCW +           +LC RC +V+ 
Sbjct: 923 CQAW--VLPPKDHKCPRCWRFVAPA-----EDSLCVRCEDVVG 958


>gi|169595340|ref|XP_001791094.1| hypothetical protein SNOG_00408 [Phaeosphaeria nodorum SN15]
 gi|160701074|gb|EAT91903.2| hypothetical protein SNOG_00408 [Phaeosphaeria nodorum SN15]
          Length = 1080

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 31/341 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FK + V  DW+N Y T++  +E  Q+EVF  M  +G IYR  KPVHWSPSSRTALAE
Sbjct: 130 MRGFKEWAVMGDWDNAYKTMERGFEIRQLEVFKTMFEKGLIYRQNKPVHWSPSSRTALAE 189

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY EGH S + +  F +  A    +G L     ++ + +WTTTPWT+PAN+A+AV+ 
Sbjct: 190 AELEYDEGHKSLAAFVRFPVSVAEELRNGALKGIDGEVNVVIWTTTPWTLPANSAIAVHN 249

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            ++Y +V   +     +   A++ +   +VL  ++++ +++A                  
Sbjct: 250 DMEYCLVRDSNGSGEMTFVAASRIAEYQSVL--ERELSVVLAG----------------- 290

Query: 181 KTLAGSDLE-NCRYVHPVDN-RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
             L GSDL  + +Y +P    R    VI  D++T  SGTGLVH A GHG +DY      G
Sbjct: 291 --LRGSDLAGHLQYENPFQKARGFQSVIHADFVTDSSGTGLVHLAAGHGMDDYRVCHALG 348

Query: 239 LPILSPVDDEGKFTEEAGK-----FSGLDVLGDGNV---AVVKYLDEQMSLIMEEPYEHK 290
           LP  +P+DD G FT++A         GL V  +      AV  YL+ Q  L  ++ Y HK
Sbjct: 349 LPAFAPIDDAGAFTKDAFPEQPELLEGLLVADENKTASKAVCNYLENQGLLRGKQEYRHK 408

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YP DWRTK+P I RATEQWFA+VE  + A+M+AI  V+++P
Sbjct: 409 YPIDWRTKEPVITRATEQWFANVESIKAASMNAIEHVQFMP 449



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 156/359 (43%), Gaps = 46/359 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH------DWRVGNS 392
           G+D LRLW +S DY  DV IG  VL  ++    K R T ++LLG          +     
Sbjct: 659 GSDALRLWAASSDYMRDVTIGQPVLMSVNQALHKYRVTFKWLLGIFSLPSCPPTFSSFEH 718

Query: 393 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 452
           +S +   + D  AL +L  +  +I   Y  Y+FFK    + ++I  DLS FYF+ A    
Sbjct: 719 LSPESTHLADVLALHRLGQVTHDIHAHYARYEFFKGVNALNKYISNDLSAFYFETASRIG 778

Query: 453 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA----AE 508
           YT    +    S Q VL      +++++AP+ P L E+VW ++P    L D S       
Sbjct: 779 YTRAICTIASAS-QRVLGLVFYELLKILAPVTPLLVEEVWAHVPAG--LRDNSTHPARGT 835

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
           +      P +D++  T           I  L T +    E  R  K IGS LE+ V L  
Sbjct: 836 WTRPPPSPSVDKQTETVLT-------HITSLSTAIKTAQEALRADKKIGSGLESSVTLLL 888

Query: 569 DDASLASRLREM---CTAK-----HDA-DTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
              + A +L E+   CT       HD  + L  IF++S+ E+  S      R   +S E 
Sbjct: 889 PSQTAAHKLVELVKTCTQNSSLGVHDVEEQLASIFVVSEFEIRGSDAE---RAWAWSVEQ 945

Query: 620 LVEGKDKVWIG----VSRAEGSKCERCWNYSTQVGSFVEHP--TLCSRCYEVLAVQPIP 672
            V+   + W G    V    G KC RCW        FV  P   +C R   VL ++P P
Sbjct: 946 DVDAGVEGWEGAKVVVHAPGGEKCPRCWR-------FVREPEEEICQRFSGVL-IKPRP 996


>gi|380490537|emb|CCF35944.1| isoleucyl-tRNA synthetase, partial [Colletotrichum higginsianum]
          Length = 531

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 193/340 (56%), Gaps = 38/340 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ YGV ADW+  + T+DP++E  Q+ +F QM  +G IYR  KPV+WSPSSRTALAE
Sbjct: 134 MGGFQSYGVMADWDARWTTMDPDFEIRQLRLFQQMVRRGLIYRKSKPVYWSPSSRTALAE 193

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS + Y  + ++  P      L  F   L   +WTTTPWT+PAN A+A++ 
Sbjct: 194 AELEYNENHVSTAAYVRYPIIGGPS-----LGGFSGQLYAIIWTTTPWTLPANRAIAIHD 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L YAV+ +     G +   A  +      L  +++  ++VAS                 
Sbjct: 249 DLDYAVISVN----GSAYLTAVSRLEAVKGLFTEEEPQVVVAS----------------- 287

Query: 181 KTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
             + GS+L+  +Y + +   Q     +I  D+++ +SGTGLVH APGHG EDY    + G
Sbjct: 288 --MKGSELKGLKYRNRLQGAQSAAQPIIHADFVSDDSGTGLVHVAPGHGFEDYEACAELG 345

Query: 239 LPILSPVDDEGKFTEEAGKFS------GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           +   +P+DDEG FT EA   +         +L  G+ AV+  +  Q  ++    Y+HKYP
Sbjct: 346 IDAFAPIDDEGNFTREAFPDAPERLTEASSILKGGSKAVLALI--QDDVLNAAKYKHKYP 403

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
           YDWRTK+P + R+T QWFA V   +  A++A+ +VK+VPP
Sbjct: 404 YDWRTKQPVVMRSTAQWFADVGSIKDDAINALKEVKFVPP 443


>gi|227514816|ref|ZP_03944865.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
           14931]
 gi|227086806|gb|EEI22118.1| hypothetical protein HMPREF0511_0936 [Lactobacillus fermentum ATCC
           14931]
          Length = 930

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 200/330 (60%), Gaps = 35/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W++PYLTL  E+EAAQI+VFG  + +G +Y+ KKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDHPYLTLAKEFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  V+++ +   ++        GLL+    D  L  WTTTPWT+PA+ AVAV+A  +
Sbjct: 199 EYHDV-VAKTAFFTEQVQDG----KGLLDS---DTYLVGWTTTPWTIPASEAVAVSADFE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+V+           P+    +             +VA+ L+  L  K+  T   + KT
Sbjct: 251 YALVQ-----------PSGSDRK------------YVVAASLLGDLAQKFNWTDYQVVKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+++E     HP  +R+  V +  DY+T ++GTGLVHTAPG+G +DY    KY LPI 
Sbjct: 288 FKGAEMEGMTTKHPYIDRELLVGL-ADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIF 346

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +P++D+G  T E G +F G+    D +   ++ L+E  +L++EE  EH YP+DWRTKKP 
Sbjct: 347 APMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPI 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRAT+QWF S++  R   + A+ +V + P
Sbjct: 406 VFRATDQWFVSIDKMRDEILKAVDEVTYYP 435



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 161/340 (47%), Gaps = 50/340 (14%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           GA+++RLWV S D + DV +  + L+Q+++ YRKLR T R+LL N  D+   N ++Y+  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKR 674

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQY        +  +R+ ++ Y F   ++ +  F+  DLS+FY +VAKD LY     
Sbjct: 675 EAVDQYMTVNFNRFLAGMRDEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPED 734

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ------------NLPFAYTLEDGSA 506
           S  RRS Q      L  + +++ PILPH  E+VW              +P A T E+G+A
Sbjct: 735 SHVRRSMQATFYEILSGLTKLLTPILPHTTEEVWSYMDEPEDFVQLTEIPEARTFENGNA 794

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
                      L EKW  F           +ELR+ V K LE AR  KLIG SLEA   L
Sbjct: 795 -----------LLEKWEGF-----------MELRSHVLKCLEEARNAKLIGRSLEASADL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +   AS    L ++ T   DA  L  +  +S  +             P   E      D 
Sbjct: 833 YL-TASQQELLADLGT---DAGLLCGVSALSVHDA---------SEAPAEAESF---SDN 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V  A+G  C+RC      VGS   +  LC+RC +++
Sbjct: 877 AAVLVQAAKGEVCDRCRMTKEDVGSDPAYQQLCARCAKLV 916


>gi|38567295|emb|CAE76584.1| related to isoleucine--tRNA ligase [Neurospora crassa]
          Length = 957

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 193/340 (56%), Gaps = 36/340 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V +DW N + T+D  +E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 130 MDSFRTYAVMSDWENRWTTMDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAE 189

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S Y  F +        G L  F  +L   +WTTTPWT+PAN A+AV+ 
Sbjct: 190 AELEYNEAHISKSAYVRFPITKDSARIPG-LEGFTGNLYAVIWTTTPWTLPANRAIAVHD 248

Query: 121 KLQYAVVEIQSLLEGDSA--APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
            L Y  V +     GD A         R   VL  ++    I+A                
Sbjct: 249 DLLYHAVRV-----GDDAYLVAEGGLERVAKVLMGEEGTPEILA---------------- 287

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
              T+ GS L   +YV+P+  +       I G ++T +SG+GLVH APGHG +DY+    
Sbjct: 288 ---TVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKD 344

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P+ +PVD++G FTEEA      +  G+ VL  G+ AV++   + +  + +  Y+HKY
Sbjct: 345 LGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHK--YKHKY 402

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 403 PYDWRTKKPIIIRATAQWFADVDNIKELALKALEEVKFVP 442



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 39/343 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 644 PPKDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 696

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S     L  +D  AL QL++ +  I   Y++Y+F K F  + R+I  DLS FY +  KD
Sbjct: 697 QSARAAPLTALDHIALVQLKDAMVEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKD 756

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY              VL    +  +R++API P L E+ W++ P A+  ED S    +
Sbjct: 757 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRP-AWMKEDPSILHPL 807

Query: 511 FE-SKWPVLDEKWRTFPVGEIYFWGKIL-ELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            +    P++D    ++  G +     +L E    +    E+AR GK++GSSL   V +  
Sbjct: 808 HQLYNSPLIDSSRLSYDEGVLRKDIPVLMETHAAIKAASELARRGKVLGSSLGCSVVIKA 867

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP---YSGEYLVEGKD 625
              S A     +   +   D L  +F++S V++      G I   P   Y  ++ + G  
Sbjct: 868 PKDSKA-----LSVLQKYKDELDTMFVVSSVDL-----GGAIEGEPAWKYVQDFEMGGHG 917

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            + W  V   +  KC RCW +           +LC RC +V+ 
Sbjct: 918 CQAW--VLPPKDHKCPRCWRFVAPA-----EDSLCVRCEDVVG 953


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 203/339 (59%), Gaps = 25/339 (7%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           V P E    YGAD+LRLWV+S D+  DV +  ++L+Q +++YR++R T RY+LGN+ ++ 
Sbjct: 609 VSPHEVIDQYGADILRLWVASSDFKEDVRVSDKILQQNAEVYRRIRNTFRYILGNMDNFD 668

Query: 389 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
            V N++ YD+L  ID++AL +L+ +V  I E+YE Y + K++  +  F   ++S+FY DV
Sbjct: 669 PVENTVEYDELLEIDKWALHKLQKLVDEITEAYEEYDYHKLYHKVHNFCATEMSSFYMDV 728

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLYT  T S  RR+ QT +   L ++++V++P+L H AE+ WQ+LP     E G  A
Sbjct: 729 LKDRLYTSVTDSTKRRAAQTAMYEILTTLIKVLSPVLVHTAEEAWQHLP-----ESGKEA 783

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           E VF + WP + E +    +     W ++L +R +V+K LE+AR   ++G SL+A + ++
Sbjct: 784 ESVFLTDWPEVKEDYINEELEAK--WDRLLTIREDVSKALELARNEDIVGHSLDAGIEIY 841

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             +  +   L++        D L  +FI+S+VE L +  N  +    Y+GE     +  +
Sbjct: 842 ASE-EVNDFLKQF-------DNLADLFIVSKVE-LAAKENADVTT--YTGE-----ETDI 885

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V  A G KC+RCW Y T VG   +HP +C+ C EV+
Sbjct: 886 EVVVEAAPGEKCDRCWKYRTSVGDNEDHPEICAECLEVV 924



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 188/329 (57%), Gaps = 31/329 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G W +W+NPY+TLDPEYEA QIEVFG++   GY+ +G KPV+W P   TALAEAE+
Sbjct: 140 FKRLGAWGEWDNPYVTLDPEYEAKQIEVFGEIIKNGYLSKGMKPVYWCPHCNTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY E     SIY  F +      T G       D  + +WTTTPWT+P+N A+ V+    
Sbjct: 200 EYEEARAP-SIYVKFPVQEG--ITVGDTELTAEDSYVVIWTTTPWTIPSNMAITVHPDFD 256

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y V E     EGD                      ++VA +LV  +    G  +  I + 
Sbjct: 257 YVVAE----AEGD---------------------LLVVAKELVDEMMEIVGIDEYEIVEE 291

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G  LE     HP  +R+ P++  GD++T E GTG VHTAPGHG EDYV  ++Y LP+ 
Sbjct: 292 IEGDALEGLVTTHPFFDRESPIIF-GDHVTLEQGTGCVHTAPGHGHEDYVIGVEYDLPVF 350

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +P+D++G FTEEAG F+G+    D N+ V   L++   L+  +  +H YP  WR K P I
Sbjct: 351 APMDNDGVFTEEAGPFAGM-YYDDANIKVTDMLEDDDLLMNLDFIDHSYPNCWRCKNPII 409

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRATEQWFASV+  +  A++ I  V W P
Sbjct: 410 FRATEQWFASVDAIKDDALETIKDVDWYP 438


>gi|307205447|gb|EFN83779.1| Isoleucyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 954

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/338 (38%), Positives = 189/338 (55%), Gaps = 34/338 (10%)

Query: 4   FKRYGVWADWNNP--YLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           F  +G  ADW+    Y T  P Y   Q++ F  +  +G +YR  KPVHWSPSS+TALAE+
Sbjct: 168 FMSWGAIADWSESGCYFTNHPSYIKNQLQQFINLYEKGLVYRAFKPVHWSPSSKTALAES 227

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E H S+S+    ++ + P +   L ++ L  L   +WTTTPWT+ AN A+A +  
Sbjct: 228 ELEYNESHRSKSVIVRMQLDTLPSNLKSLGSKALHAL---IWTTTPWTLIANQAIAFSND 284

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           + Y VVE                        D  K   I+A D V ++E K G    I  
Sbjct: 285 IVYCVVE------------------------DSSKNLYIIAQDSVTSVEKKLGPLKAIA- 319

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T+ G +L   RY+HP+   + P + G  ++T   GTGLVH AP HG ED++ +++  + +
Sbjct: 320 TVKGQELAEVRYLHPITKERLPFLPGA-HVTNSVGTGLVHIAPAHGPEDFLVAIENNISV 378

Query: 242 LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           LS VDDEG +T+EAG KF+GL+VL DG   ++ Y+     ++  +   H YPYDWRTKKP
Sbjct: 379 LSLVDDEGCYTKEAGDKFAGLNVLTDGADKILNYI--AADVLHADTVTHSYPYDWRTKKP 436

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGY 338
            I RA+ QWF  V+  ++ A+D+I  ++  P Q    Y
Sbjct: 437 IIIRASHQWFIDVKSIKEEAIDSIANIRIYPQQNQTSY 474



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 159/342 (46%), Gaps = 44/342 (12%)

Query: 336 PGYGADVLRLWVSS--VDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI 393
           P YG D LR WV+S    +T  V +   +LR+  +  +KLR  LR+LLG LH +  G S+
Sbjct: 654 PTYGVDTLRWWVASHACQHT-QVPVSTTLLRESHECIQKLRLILRFLLGVLHSYSAGVSV 712

Query: 394 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
             + L  +D+Y L+ L    + I+  Y+ Y +    +++  F+   +S+ Y  + KDRLY
Sbjct: 713 EPEYL-YLDKYMLYALRQYDEEIQRLYDDYLYHHASKLVMHFLANTVSSVYCHLIKDRLY 771

Query: 454 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                S TR +   V    L  + R IAPI+PHLAE+ W + P      +  A+  ++ +
Sbjct: 772 CDKAASPTRLAAVEVTRETLTVLARSIAPIVPHLAEEAWLHHP------ENLASVPLYHT 825

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           +  V  E W    +         L LR++VN + +   T +L G+ + +K Y      S+
Sbjct: 826 EHKV-SETWDQPEIA--MHVETALRLRSKVNTMAD-QNTWELSGTVIASKDY---KSLSI 878

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             R RE  T++     L  I  +S + +  S+            E  VE ++        
Sbjct: 879 LQRDRESSTSE-----LCEILQLSSITLTESST---------VTETQVELRN-------- 916

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            E + C+RC  +        +   LCSRC +VL V  + S++
Sbjct: 917 TEKTLCQRCRRHPES-----DKNGLCSRCIKVLDVTNLSSIS 953


>gi|223939734|ref|ZP_03631606.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
 gi|223891605|gb|EEF58094.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
          Length = 942

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 142/397 (35%), Positives = 206/397 (51%), Gaps = 69/397 (17%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPYLTL+ EYEA ++ +F  +  +G++YRGKKPV+WS   RTALAEAE+
Sbjct: 141 FKRLGVLGDWDNPYLTLNKEYEADELRMFADIVEKGFVYRGKKPVYWSIPCRTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + HVS+S Y  F +V  P +             + +WTTTPWT+PAN AVA N+   
Sbjct: 201 EYHD-HVSQSTYVKFPIVGRPNTY------------ILIWTTTPWTLPANLAVAYNSTFS 247

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+ V +     GD                       ++++ L+PT+  K G     I ++
Sbjct: 248 YSHVRV-----GDET--------------------YVLSTMLLPTVSEKCGWAGYEIIRS 282

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L G  L+   Y HP  NR   +  G +++    GTG VH APGHG +DY    + GLPI 
Sbjct: 283 LTGEHLKEVEYQHPFCNRTGKLFAGDNFVENSVGTGFVHIAPGHGLDDYNLGRQNGLPIY 342

Query: 243 SPVDDEG---------KFTEEAGKFSGLDVL-----GDGNVAVVKYLDEQMSLIMEEPYE 288
           SPVDD+G         +  +   +  G  +L      D N AV+  L  + +L+ +E Y 
Sbjct: 343 SPVDDDGCLAYTNDLPREQQMPAEMVGKSILEKHGKSDANEAVLHELRLRKALLHQENYH 402

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAP 336
           H YP+ WR+K   IFRA +QWF S++   FR  A+D+I  VKWVP           +  P
Sbjct: 403 HSYPFCWRSKTAIIFRAMDQWFISIDHNKFRDQALDSINHVKWVPDWGKNRIEGAVKSRP 462

Query: 337 GYGADVLRLWVSSV----DYTGDVMIGPQVLRQMSDI 369
            +     R W   +    D  G+ ++  +++R  +D+
Sbjct: 463 DWCISRQRTWGVPIPAFYDAQGNAILDAKIVRNAADL 499



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 42/350 (12%)

Query: 325 GQVKWVPPQEAPGY----GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 380
           GQ  +  PQ A  Y    GADV+RLWV+S DY  D+++  + + ++S+ YR +R TLRY 
Sbjct: 624 GQGGYEKPQTAEAYVKKYGADVVRLWVASQDYRNDIVVSEERVNKVSETYRGIRNTLRYQ 683

Query: 381 LGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVD 439
           L NL+D+    ++++ D L  +D++ L +   + K +  +Y +Y+F  ++Q + +F+ V+
Sbjct: 684 LSNLYDFDPAKHTVADDKLTGLDRWILGEFSKLEKEVLAAYANYEFHVVYQKVSQFVAVE 743

Query: 440 LSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY 499
           LS+ Y DV KDRLYT    S  RRS QT L   +  +  ++AP+L    ++ W+ +P   
Sbjct: 744 LSSIYHDVVKDRLYTDAANSQRRRSTQTALYRLVTGLSHILAPMLVFTTDEAWEFIP--- 800

Query: 500 TLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSS 559
                  A  V  S W        T P  E   W  + ELR +V   LE AR  K IG +
Sbjct: 801 ----AKPAASVHLSNWTPAS---FTLPEKEQLTWKTLFELREQVLPELEKARQAKTIGKA 853

Query: 560 LEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEY 619
           L+AK+ L   + SLA        A+  A+ L+ +  +SQ+E+                  
Sbjct: 854 LDAKLNLSGTNPSLAE-------ARSHAEALRELLNVSQLEI------------------ 888

Query: 620 LVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
             EG   +   V++A+G KCERCW++ T +GS  EHPT+C+RC  V+AV+
Sbjct: 889 KTEGDQPITAVVAKADGQKCERCWHWETDIGSSPEHPTICARC--VIAVK 936


>gi|385812133|ref|YP_005848524.1| hypothetical protein LC40_0407 [Lactobacillus fermentum CECT 5716]
 gi|299783032|gb|ADJ41030.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
           5716]
          Length = 930

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 200/330 (60%), Gaps = 35/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W++PYLTL  E+EAAQI+VFG  + +G +Y+ KKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDHPYLTLAKEFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  V+++ +   ++        GLL+    D  L  WTTTPWT+PA+ AVAV+A  +
Sbjct: 199 EYHDV-VAKTAFFTEQVQDG----KGLLDS---DTYLVGWTTTPWTIPASEAVAVSADFE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+V+           P+    +             +VA+ L+  L  K+  T   + KT
Sbjct: 251 YALVQ-----------PSGSDRK------------YVVAASLLGDLAQKFNWTDYQVVKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+++E     HP  +R+  V +  DY+T ++GTGLVHTAPG+G +DY    KY LPI 
Sbjct: 288 FKGAEMEGMTTKHPYIDRELLVGL-ADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIF 346

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +P++D+G  T E G +F G+    D +   ++ L+E  +L++EE  EH YP+DWRTKKP 
Sbjct: 347 APMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPI 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRAT+QWF S++  R   + A+ +V + P
Sbjct: 406 VFRATDQWFVSIDKMRDEILKAVDEVTYYP 435



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 162/340 (47%), Gaps = 50/340 (14%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           GA+++RLWV S D + DV +  + L+Q+++ YRKLR T R+LL N  D+   N ++Y+  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKR 674

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQY        +  +R+ ++ Y F   ++ +  F+  DLS+FY +VAKD LY     
Sbjct: 675 EAVDQYMTVNFNRFLAGMRDEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPED 734

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ------------NLPFAYTLEDGSA 506
           S  RRS Q      L  + +++ PILPH  E+VW              +P A T E+G+A
Sbjct: 735 SHVRRSMQATFYEILSGLTKLLTPILPHTTEEVWSYMDEPEDFVQLTEIPEARTFENGNA 794

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
                      L EKW  F           +ELR+ V K LE AR  KLIG SLEA   L
Sbjct: 795 -----------LLEKWEGF-----------MELRSHVLKCLEEARNAKLIGRSLEASADL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +   AS    L ++ T   DA  L  +  +S  +             P   E      D 
Sbjct: 833 YL-TASQQELLADLGT---DAGLLCGVSALSVHDA---------SEAPAEAESF---SDN 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V  A+G  C+RC      VGS   +P LC+RC +++
Sbjct: 877 AAVLVQAAKGEVCDRCRMTKEDVGSDPAYPQLCARCAKLV 916


>gi|184155058|ref|YP_001843398.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|254782414|sp|B2GB86.1|SYI_LACF3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|183226402|dbj|BAG26918.1| isoleucyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 930

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/330 (40%), Positives = 200/330 (60%), Gaps = 35/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W++PYLTL  E+EAAQI+VFG  + +G +Y+ KKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDHPYLTLAKEFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  V+++ +   ++        GLL+    D  L  WTTTPWT+PA+ AVAV+A  +
Sbjct: 199 EYHDV-VAKTAFFTEQVQDG----KGLLDS---DTYLVGWTTTPWTIPASEAVAVSADFE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+V+           P+    +             +VA+ L+  L  K+  T   + KT
Sbjct: 251 YALVQ-----------PSGSDRK------------YVVAASLLGDLAQKFNWTDYQVVKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+++E     HP  +R+  V +  DY+T ++GTGLVHTAPG+G +DY    KY LPI 
Sbjct: 288 FKGAEMEGMTTKHPYIDRELLVGL-ADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIF 346

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +P++D+G  T E G +F G+    D +   ++ L+E  +L++EE  EH YP+DWRTKKP 
Sbjct: 347 APMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPI 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRAT+QWF S++  R   + A+ +V + P
Sbjct: 406 VFRATDQWFVSIDKMRDEILKAVDEVTYYP 435



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 162/340 (47%), Gaps = 50/340 (14%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           GA+++RLWV S D + DV +  + L+Q+S+ YRKLR T R+LL N  D+   N ++Y+  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMETLQQISESYRKLRNTFRFLLANTSDFGPENFVAYEKR 674

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQY      + +  +R+ ++ Y F   ++ +  F+  DLS+FY +VAKD LY     
Sbjct: 675 EAVDQYMTVNFNHFLAGMRDEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPED 734

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ------------NLPFAYTLEDGSA 506
           S  RRS Q      L  + +++ PILPH  E+VW              +P A T E+G+A
Sbjct: 735 SHVRRSMQATFYEILSGLTKLLTPILPHTTEEVWSYMDEPEDFVQLTEIPEARTFENGNA 794

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
                      L EKW  F           +ELR+ V K LE AR  KLIG SLEA   L
Sbjct: 795 -----------LLEKWEGF-----------MELRSHVLKCLEEARNAKLIGRSLEASADL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +   AS    L ++ T   DA  L  +  +S  +             P   E      D 
Sbjct: 833 YL-TASQQELLADLGT---DAGLLCGVSALSVHDA---------SEAPAEAESF---SDN 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V  A+G  C+RC      VGS   +  LC+RC +++
Sbjct: 877 AAVLVQAAKGEVCDRCRMTKEDVGSDPAYQQLCARCAKLV 916


>gi|346314199|ref|ZP_08855720.1| isoleucyl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
 gi|345906557|gb|EGX76281.1| isoleucyl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
          Length = 910

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 187/331 (56%), Gaps = 39/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G KPV+WSPSS TALAEAE+
Sbjct: 139 FLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKGLKPVYWSPSSETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN  + +N    
Sbjct: 199 EYKDIK-SPTIFVKF----AVKDGKGVLD---SDTSFVIWTTTPWTIPANLGICLNKDYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE                          +K  +IV  +LV  L  K+G  L  KK L
Sbjct: 251 YALVE-------------------------SEKGKLIVLEELVDALWEKFG--LETKKKL 283

Query: 184 A---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           A   GS+LE     HP+ +R+  +VI GD++T ++GTG VHTAPG G +D+    KYGLP
Sbjct: 284 ATYKGSELEMITCQHPLYDRE-SLVILGDHVTADAGTGCVHTAPGFGADDFFIGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
               VD+ G   E+AG +     + D N  V + LD   +L+  E   H YP+DWRTKKP
Sbjct: 343 AYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGALLKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 403 IIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---DW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D+
Sbjct: 604 PGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEEDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D 
Sbjct: 664 TKEDLVDINELPELDKYILVLLNEVNEKAMKAYKEYRFADITNMLSNLMTNELSAYYMDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V  N  F    E     
Sbjct: 724 TKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV--NDFFHTEAESIHLG 781

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            F        LD +       ++    +++ +R ++ K LE AR  K+IG SLEA V + 
Sbjct: 782 SFA-----QALDVQGADTIKADM---ERMMAIRQDIFKALEEARAEKVIGKSLEAHVMIN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D   A  + ++C      +   +  I+S+V            ++    +Y V      
Sbjct: 834 VSDEDRA-LIEKLC-----GNHFNQWLIVSKVSF----------SVDELKQYEV-----C 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V + EG  C RCWN +           LC RC EVL
Sbjct: 873 QVEVEKCEGKVCPRCWNITDSHAE----DGLCERCAEVL 907


>gi|313901154|ref|ZP_07834642.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
 gi|422327525|ref|ZP_16408552.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
 gi|312954112|gb|EFR35792.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
 gi|371663365|gb|EHO28555.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
          Length = 908

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 187/331 (56%), Gaps = 39/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G KPV+WSPSS TALAEAE+
Sbjct: 139 FLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKGLKPVYWSPSSETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN  + +N    
Sbjct: 199 EYKDIK-SPTIFVKF----AVKDGKGVLD---SDTSFVIWTTTPWTIPANLGICLNKDYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE                          +K  +IV  +LV  L  K+G  L  KK L
Sbjct: 251 YALVE-------------------------SEKGKLIVLEELVDALWEKFG--LETKKKL 283

Query: 184 A---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           A   GS+LE     HP+ +R+  V++G D++T ++GTG VHTAPG G +D+    KYGLP
Sbjct: 284 ATYKGSELEMITCQHPLYDRESLVILG-DHVTADAGTGCVHTAPGFGADDFFIGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
               VD+ G   E+AG +     + D N  V + LD   +L+  E   H YP+DWRTKKP
Sbjct: 343 AYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGALLKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 403 IIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---DW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D+
Sbjct: 604 PGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEEDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D 
Sbjct: 664 TKEDLVDINELPELDKYILVLLNEVNEKAMKAYKEYRFADITNMLSNLMTNELSAYYMDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V  N  F    E     
Sbjct: 724 TKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV--NDFFHTEAESIHLG 781

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            F        LD +       ++    +++ +R ++ K LE AR  K+IG SLEA V + 
Sbjct: 782 SFA-----QALDVQGADTIKADM---ERMMAIRQDIFKALEEARAEKVIGKSLEAHVMIN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D   A  + ++C      +   +  I+S+V            ++    +Y V      
Sbjct: 834 VSDEDRA-LIEKLC-----GNHFNQWLIVSKVSF----------SVDELKQYEV-----C 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V + EG  C RCWN +           LC RC EVL
Sbjct: 873 QVEVEKCEGKVCPRCWNITDSHAE----DGLCDRCAEVL 907


>gi|78357185|ref|YP_388634.1| isoleucyl-tRNA synthetase [Desulfovibrio alaskensis G20]
 gi|123552202|sp|Q30ZF7.1|SYI_DESDG RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|78219590|gb|ABB38939.1| isoleucyl-tRNA synthetase [Desulfovibrio alaskensis G20]
          Length = 934

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 189/332 (56%), Gaps = 34/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W+NPYLT+ P YEAA      +   +G + R KKP++W  S  TALAEAE+
Sbjct: 141 FKRLGVMGQWDNPYLTMTPAYEAATARELVRFMEKGSVVRSKKPIYWCCSCETALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SI+  F M  A    + +L        + +WTTTPWT+P N AVAV+ + +
Sbjct: 201 EYHD-HTSPSIFVRFPMPDA--RVAEILGTDPASTSIVIWTTTPWTIPDNMAVAVHPEFE 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-KWGTKLVIKKT 182
           YAVV                        K+  + +++ A       E   W     ++ T
Sbjct: 258 YAVV------------------------KNDGQHYVLAAELAASCAETFGWENPQTVR-T 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G+ LE     HP+ NR+ PVV+  DY+T +SGTG VHTAPGHG+EDY T L+YGL I 
Sbjct: 293 VTGAALEGLVARHPIYNRESPVVLA-DYVTLDSGTGCVHTAPGHGREDYETGLRYGLEIY 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++DEG+F +    F+GL+V  + N  V++ L E  +L+ +   +H YP+ WR K+P I
Sbjct: 352 SPMNDEGRFLDSVEFFAGLNVF-EANPKVIEKLAELGNLLAQAKIKHSYPHCWRCKQPVI 410

Query: 303 FRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
           FRAT QWF S+E  G R+ A+ AI   V W+P
Sbjct: 411 FRATTQWFISMEANGLREKALKAIRNDVDWIP 442



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/343 (37%), Positives = 182/343 (53%), Gaps = 27/343 (7%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + PQE    YGA++LR+WVSS DY  DV I  ++L ++ D YR++R T RYLLGNL D  
Sbjct: 615 IAPQEIIDKYGAEILRMWVSSADYREDVRISEEILSRLVDAYRRIRNTCRYLLGNLSDLS 674

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +    L  +D++AL       K ++ +Y  Y+F K++  +    + DLS FY D+ 
Sbjct: 675 AADLLPVGQLESLDRFALDIAMRAHKRVQAAYNDYEFHKVYHTLHNLCVSDLSAFYLDIL 734

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY+    S  RRS QT +   L+ ++R +AP+L   AE+V+  +P A   E    A 
Sbjct: 735 KDRLYSSKADSKERRSAQTAVYHILMLLIRDMAPVLSFTAEEVYSYIPEALRPE----AV 790

Query: 509 FVF---ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            VF   E   P ++      P  E   W   L +R EV K +E  R    IG  L+A V 
Sbjct: 791 TVFALREDDIPPME-----MPAAEREDWEAFLAVRAEVTKAMEPVRKSGEIGHPLDAHVT 845

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD 625
           LF DDA LA++L      K     L+  FI+S+V V P      +   P    Y  E  +
Sbjct: 846 LFMDDA-LAAKL------KATGADLRACFIVSKVTVAP------LAQAPEQA-YTSEELN 891

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
            + I +++A G KCERCW +S ++GS  EHP+LC RC  VL  
Sbjct: 892 GLRISIAKAPGQKCERCWIWSEELGSSSEHPSLCPRCTGVLCA 934


>gi|357419771|ref|YP_004932763.1| isoleucyl-tRNA synthetase [Thermovirga lienii DSM 17291]
 gi|355397237|gb|AER66666.1| Isoleucyl-tRNA synthetase [Thermovirga lienii DSM 17291]
          Length = 930

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 186/333 (55%), Gaps = 35/333 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+R GV  DW+NPY+T   +YEAAQI VF  M  +G +Y+GKKPV W    +TALA A
Sbjct: 140 SEFRRLGVLGDWDNPYITYKSQYEAAQIGVFADMVERGLVYKGKKPVFWCIDCQTALAAA 199

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL--AVWTTTPWTVPANAAVAVN 119
           E+EY E   S SIY     V+ P      L E L D      +WTTTPWT+PA+ AVAV+
Sbjct: 200 EIEY-EDESSPSIY-----VAYPFKDCEKLAEELKDRQCYTVIWTTTPWTLPASMAVAVH 253

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV- 178
               Y+ VE                S  G V         ++A +L   +E   G +   
Sbjct: 254 PDYSYSFVE----------------SEDGRVF--------LLAEELKSAVEKDTGIRFTK 289

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
              T+ G +LE  R  HP  +R+ P+V+  DY+  + GTG VHTAPGHG ED+ T +KYG
Sbjct: 290 TLLTVKGRELELKRLQHPFYDREVPMVL-ADYVGLDQGTGCVHTAPGHGIEDFETGVKYG 348

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +L+PVDD+G F        GL  L +G   V+  L E   L+ +    H YP+ WR K
Sbjct: 349 LDVLNPVDDKGFFVANTPLVGGLS-LEEGAKKVLSVLSESGRLLGKSQITHSYPHCWRCK 407

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRATEQWF SV+ FR+ A++ I +V+WVP
Sbjct: 408 KPVIFRATEQWFVSVDSFREKALNEIDKVEWVP 440



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 203/364 (55%), Gaps = 42/364 (11%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  + PQE    YGAD+LRLWV+S DY  DV I   +L+ + + YR
Sbjct: 596 VDGEGRKMSKSLGNV--IAPQEIINKYGADILRLWVASTDYRNDVRISENILKNLVESYR 653

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           ++R T R+LLGNL+D+    +S++++    +D++ + +L+++VK + + ++ Y F     
Sbjct: 654 RIRNTARFLLGNLYDFEPAKDSVNHERPEEMDKWIISRLQSLVKRVTKGFDEYAFHLPTY 713

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
           +I  F + DLS FY DV+KDRLYT    S  RRSCQT L   L+++ +V++PIL   AE+
Sbjct: 714 MIHHFCVNDLSAFYLDVSKDRLYTEKPNSHKRRSCQTALWEILMTLTKVLSPILSFTAEE 773

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWP-----VLDEKWRTFPVGEIYFWGKILELRTEVNK 545
           +WQ +       DGS  E VF + WP     ++DE+  +        W +ILE+R ++ K
Sbjct: 774 IWQEMKKI----DGSLEESVFMASWPQVHLDLVDEELES-------KWARILEVRAKITK 822

Query: 546 VLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
            LE+AR+  LIG  LEA+V +  + AS  +    + T +  A+    I I+S      S 
Sbjct: 823 GLEMARSQGLIGHPLEAQVVI--EGASADNEDIRLLTPEDWAE----ILIVSGF----SL 872

Query: 606 PNGLIRNIPYSGEYLVEGKDK---VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
                RN+ +     +  KD+   + + V++A+G KC RCW +S  V        LC RC
Sbjct: 873 EEEFSRNVDH-----IRFKDEDIGIQMVVAKADGMKCPRCWKFSESVA----EKGLCERC 923

Query: 663 YEVL 666
           Y VL
Sbjct: 924 YNVL 927


>gi|345571411|gb|EGX54225.1| hypothetical protein AOL_s00004g258 [Arthrobotrys oligospora ATCC
           24927]
          Length = 1016

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 191/337 (56%), Gaps = 32/337 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F+ +GV  DW N Y T+D EYE  Q+ VF +M+ +G IYR  KPV+WSPSSRTALAEA
Sbjct: 162 AGFRSWGVIGDWENAYRTMDLEYEVRQLRVFKEMTKKGLIYRHFKPVYWSPSSRTALAEA 221

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY E H S++    F + +     S L N     +  A+WTTTPW++P N A+ +N  
Sbjct: 222 ELEYNEAHNSKAATVKFPLANLGSYLSSLPN-VDKTISAAIWTTTPWSIPGNLAILINPD 280

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
           L+Y VV                 S+ G +L  +++         V  L+     +L VI 
Sbjct: 281 LKYVVV---------------NSSKHGQLLAGEER---------VEHLQKLMDEELEVIV 316

Query: 181 KTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           K + G  L +  Y HP+         V+  DY+T+++GTGLVH APGHG EDY+T  K+ 
Sbjct: 317 KDIPGKALLDVTYNHPLFPSTASPHPVLAADYVTSDTGTGLVHCAPGHGMEDYLTCQKHN 376

Query: 239 LPILSPVDDEGKFTEEA---GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP-YEHKYPYD 294
           +   SPVDD G +T +A      +GL VL  G   ++  L +   L+  +P + HKYPYD
Sbjct: 377 IQPFSPVDDSGNYTSDALPTYDLTGLPVLSAGQDKIISLLSDHNVLLGCQPKFLHKYPYD 436

Query: 295 WRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           WRTK P I RAT QWFA VE  +++A+  I ++++VP
Sbjct: 437 WRTKLPIIQRATPQWFAGVEMIKESAISEIEKIQFVP 473



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 170/340 (50%), Gaps = 22/340 (6%)

Query: 341  DVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPM 400
            D LRLWV+  D+T D  IG +VLR   +  RK R T R+LLGNL DW  G  + Y++L  
Sbjct: 697  DTLRLWVAMTDFTADGTIGEKVLRFAQEALRKYRMTGRFLLGNLGDWD-GKEVPYNELLK 755

Query: 401  IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSF 460
            IDQYAL++L  + ++ +  Y+++ F KIF     F  V LS FY ++ KDRLY       
Sbjct: 756  IDQYALYRLAELNQSSKAEYDTFAFSKIFHSTNVFNKVFLSAFYLNILKDRLYVDD--GI 813

Query: 461  TRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDE 520
            +R S QT L   L   + +++PI+P L E++W +   A T       +   +S+W     
Sbjct: 814  SRASAQTTLFYILKHYLNILSPIVPLLTEEIWSHSTPAIT----QNMDQPVKSQWVEPPA 869

Query: 521  KWRTFPVGEIYFWGKILELRTE-VNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLRE 579
            +W +    E+    +  +   E VN V+E AR  K + ++LEA + L   +   A +   
Sbjct: 870  EWSSEAAKELGRKFQSFDSCVEAVNLVVEDARNAKSLRANLEADIILVVPEGGEAQKFLN 929

Query: 580  MCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNI-PYSGEYLVEGKDKVWIGVSRAEGSK 638
               ++     L  I + S+V V  S P  L      YS  + +  ++   I V  A G K
Sbjct: 930  EIESE-----LTAILLCSKVHVSTSQPTNLDEGAWSYSKPFTLLQEEGTVIAVP-ANGQK 983

Query: 639  CERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS 678
            C RCW Y+++  S VE    C RC  V  VQ + S  A +
Sbjct: 984  CPRCWMYTSR--SEVE---ACDRCAGV--VQRLGSCTATA 1016


>gi|407922356|gb|EKG15457.1| Aminoacyl-tRNA synthetase class Ia [Macrophomina phaseolina MS6]
          Length = 869

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 197/333 (59%), Gaps = 32/333 (9%)

Query: 11  ADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHV 70
           ADW+  YLT++  +E  Q+ +F  M  +G IYR  KPV+WSPSS TALAEAELEY +GH 
Sbjct: 2   ADWDRAYLTMEKGFEMRQLSIFKAMVEKGLIYRQFKPVYWSPSSGTALAEAELEYDDGHR 61

Query: 71  SRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVE-I 129
           S + Y  F +   P S +G ++  +  LG  +WTTTPWT+PAN A+AV+++L+Y VVE +
Sbjct: 62  STAAYVSFSITKLPSSLAGRVD--ISKLGALIWTTTPWTLPANRAIAVHSELEYCVVEML 119

Query: 130 QSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIKKTLAGSDL 188
           +    GD A+                    +V  D +  L+    T+  ++   + GS+L
Sbjct: 120 RPTATGDRASQ------------------FLVGKDRLDALQQTLKTEFQILVDRIPGSEL 161

Query: 189 E-NCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPV 245
             +  YV+P++  Q     ++  D+++  SG+GLVH APGHG +DY      G+P  +PV
Sbjct: 162 SGHTEYVNPLEPDQAASQPILHADFVSATSGSGLVHIAPGHGMDDYNLCRTAGIPAFAPV 221

Query: 246 DDEGKFTEE-----AGKFSGLDVLGDGNVAVVKYLDE--QMSLIMEEPYEHKYPYDWRTK 298
           DD+G FT+E     A + +GL V G+G+ A++  L    +  L+  +   HKYP DWRTK
Sbjct: 222 DDKGCFTKEALPGQAYRIAGLSVQGEGSQAILDILKTMPRDPLVAVQDITHKYPIDWRTK 281

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +P I RATEQWFA VEG +  A+ A+  V+++P
Sbjct: 282 QPVIIRATEQWFADVEGIKDGALQALDDVEFLP 314



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 154/359 (42%), Gaps = 64/359 (17%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-----RVGNSI 393
           G D LRLWV+S DYT DV+IG  VL  ++    K R T ++LLG L D+         + 
Sbjct: 541 GPDALRLWVASSDYTKDVIIGQPVLASVTQSLHKYRVTFKWLLGVLSDFDRSASAPAPAQ 600

Query: 394 SYDDLP----MIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
           +   +P    +ID  A  QL      +  +Y SY+F++    + ++  +DLS F+F+  K
Sbjct: 601 ARTTVPGRWTLIDAIARHQLARTAHAVHAAYASYEFYRGTAALSKYTTIDLSAFFFETLK 660

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP------------- 496
           DR+Y G  T   RRS Q VL      ++ ++AP+ P L E+VW   P             
Sbjct: 661 DRVYAG--TPEDRRSAQRVLCDIFDELLDMLAPVCPLLVEEVWALTPEGVRRGRERPGRR 718

Query: 497 -----FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
                 A T ED        ES+  VL++      VG              V    E AR
Sbjct: 719 TWVPYVAETWED-EGRRVALESRMDVLEK------VG------------AAVKVAQEKAR 759

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLP----STPN 607
             K +G  LE  V +  +              K   + L  + ++S V V+     +  N
Sbjct: 760 GEKRMGGGLECDVVVKVEKEVDG------VVEKALEEDLAAVLVVSGVRVMAGEEEAVDN 813

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G +    +S E+ +EG  K  + V  A  SKC RCW Y   V    E   LC RC  V+
Sbjct: 814 GGV-EWSFSEEFELEGGAKGSVEVRPAAKSKCPRCWRY---VAPSPEE--LCGRCEHVV 866


>gi|336463905|gb|EGO52145.1| hypothetical protein NEUTE1DRAFT_125685 [Neurospora tetrasperma
           FGSC 2508]
          Length = 962

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 195/341 (57%), Gaps = 38/341 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V +DW N + T+D  +E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 135 MDSFRTYAVMSDWENRWTTMDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S Y  F +        G L  F  +L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNEAHISKSAYVRFPITKDSARIPG-LEGFTGNLYAVIWTTTPWTLPANRAIAVHD 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL---VPTLEAKWGTKL 177
            L Y  V +     GD A                   +++    L      L  + GT  
Sbjct: 254 DLLYHAVRV-----GDDA-------------------YLVADGGLERVAKVLMGEEGTPE 289

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           ++  T+ GS L   +YV+P+  +       I G ++T +SG+GLVH APGHG +DY+   
Sbjct: 290 IL-ATVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCK 348

Query: 236 KYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
             G+P+ +PVD++G FTEEA      +  G+ VL  G+ AV++   + +  + +  Y+HK
Sbjct: 349 DLGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHK--YKHK 406

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 407 YPYDWRTKKPIIIRATAQWFADVDNIKELALKALEEVKFVP 447



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 43/345 (12%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 649 PPKDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 701

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S     L  +D  AL QL++ +  I   Y++Y+F K F  + R+I  DLS FY +  KD
Sbjct: 702 QSARAAPLTALDHIALVQLKDAMAEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKD 761

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY              VL    +  +R++API P L E+ W++ P A+  ED S    +
Sbjct: 762 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRP-AWMKEDPSILHPL 812

Query: 511 FE-SKWPVLDEKWRTFPVGEIYFWGKI---LELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            +    P++D    ++   E      I   +E    +    E+AR GK++GSSL   V +
Sbjct: 813 HQLYNSPLIDSSRLSY--DEAMLRKDIPVLMETHAAIKAASELARRGKVLGSSLGCSVVI 870

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP---YSGEYLVEG 623
                S A     +   +   D L  +F++S V++      G I   P   Y  ++ + G
Sbjct: 871 KAPKDSKA-----LSVLQKYKDELDAMFVVSSVDL-----GGAIEGEPAWKYVQDFEMGG 920

Query: 624 KD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
              + W  V   +  KC RCW +           +LC RC +V+ 
Sbjct: 921 HGCQAW--VLPPKDHKCPRCWRFVAPA-----EDSLCVRCEDVVG 958


>gi|346971822|gb|EGY15274.1| isoleucyl-tRNA synthetase [Verticillium dahliae VdLs.17]
          Length = 981

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/346 (39%), Positives = 195/346 (56%), Gaps = 42/346 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M +F+ + V ADW+  + T+DP+YE  Q+ +F QM   G IYR  KPV+WSPSSRTALAE
Sbjct: 149 MDAFRSFAVMADWDARWTTMDPDYEIRQLRLFQQMVRDGLIYRKHKPVYWSPSSRTALAE 208

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-------VWTTTPWTVPAN 113
           AELEY E HVS + Y  F + +     + +++E     GL        +WTTTPWT+PAN
Sbjct: 209 AELEYNENHVSTAAYIRFPIAA---DANAIMDEVRHARGLEGRNLYAIIWTTTPWTLPAN 265

Query: 114 AAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW 173
            A+AV+ +L Y VV I     GD+   A ++S   + L    +  I+            W
Sbjct: 266 RAIAVHDELDYHVVAIH----GDAYIVAQQRSEILDTLFPDTRREIL------------W 309

Query: 174 GTKLVIKKTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDY 231
            TK        G++L+  RY + +  +      VI  D+++ ++G+GLVH APGHG +DY
Sbjct: 310 STK--------GANLKQLRYANRLRGKSSASQPVIHADFVSADAGSGLVHCAPGHGFDDY 361

Query: 232 VTSLKYGLPILSPVDDEGKFTEEAGKFS------GLDVLGDGNVAVVKYLDEQMSLIMEE 285
                 G+   +P+DDEG FT +A   +         +L  G+ AV+  LDE   ++  E
Sbjct: 362 AVCSGLGIDAAAPIDDEGHFTRDAFPDAPERLTDASPILKGGSKAVLALLDEHADVLHVE 421

Query: 286 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            Y HKYPYDWRTK+P + RAT+QWFA V+  +  A+ A+  V++VP
Sbjct: 422 RYRHKYPYDWRTKQPVVVRATQQWFADVDSIKAGALAALEHVRFVP 467



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 14/167 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLW +S ++T DV IG   L+ +  +  + R  LR LLG++H      +     L
Sbjct: 722 GPDALRLWAASSEFTKDVAIGETTLKSIHSVLIRYRTILRMLLGSMH-----PAARTAPL 776

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              D  AL QLE++  ++R ++ +++F++ F  I R++  DLS FY + +KDRLY G   
Sbjct: 777 TAADSIALVQLEDVTADVRAAFAAHEFYRAFAAINRWVANDLSAFYLEASKDRLYCGDGG 836

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 505
                    V+      ++R++AP+ P L E+ W + P A+  +D S
Sbjct: 837 G--------VIEPVFHGLLRMLAPMAPLLVEEAWAHRP-AWMQQDAS 874


>gi|373121509|ref|ZP_09535377.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
 gi|371665527|gb|EHO30692.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
          Length = 908

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 187/331 (56%), Gaps = 39/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G KPV+WSPSS TALAEAE+
Sbjct: 139 FLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKGLKPVYWSPSSETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I+  F    A     G+L+    D    +WTTTPWT+PAN  + +N    
Sbjct: 199 EY-KNIKSPTIFVKF----AVKDGKGVLD---SDTSFVIWTTTPWTIPANLGICLNKDYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA+VE                          +K  +IV  +LV  L  K+G  L  KK L
Sbjct: 251 YALVE-------------------------SEKGKLIVLEELVDALWEKFG--LETKKKL 283

Query: 184 A---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
           A   GS+LE     HP+ +R+  +VI GD++T ++GTG VHTAPG G +D+    KYGLP
Sbjct: 284 ATYKGSELEMITCQHPLYDRE-SLVILGDHVTADAGTGCVHTAPGFGADDFFIGQKYGLP 342

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
               VD+ G   E+AG +     + D N  V + LD   +L+  E   H YP+DWRTKKP
Sbjct: 343 AYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGALLKLEFITHSYPHDWRTKKP 402

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 403 IIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---DW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D+
Sbjct: 604 PGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEEDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D 
Sbjct: 664 TKEDLVDINELPELDKYILVLLNEVNEKAIKAYKEYRFADITNMLSNLMTNELSAYYMDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V  N  F    E     
Sbjct: 724 TKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV--NDFFHTEAESIHLG 781

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            F        LD +       ++    +++ +R ++ K LE AR  K+IG SLEA V + 
Sbjct: 782 SFA-----QALDVQGADTIKADM---ERMMAIRQDIFKALEEARAEKVIGKSLEAHVMIN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D   A  + ++C      +   +  I+S+V            ++    +Y V      
Sbjct: 834 VSDEDRA-LIEKLC-----GNHFNQWLIVSKVSF----------SVDELKQYEV-----C 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V + EG  C RCWN +           LC RC EVL
Sbjct: 873 QVEVEKCEGKVCPRCWNITDSHAE----DGLCERCAEVL 907


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 190/334 (56%), Gaps = 37/334 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R+GV+  W+ PYLT+D  YEA  +   G    +G +YRG KP++W     TALAEAE+
Sbjct: 140 FQRFGVFGAWDEPYLTMDFAYEADIVRELGSFMAKGSLYRGLKPIYWCCDCVTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H S S+Y  F +VSA     G++ E     D+ + +WTTTPWT+PAN AV +N +
Sbjct: 200 EYHD-HTSDSVYVAFPVVSA---LGGIIPELQGKTDVSIVIWTTTPWTLPANLAVCLNPE 255

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIK 180
           L+Y+ VE                           +  +IVAS L+ +L   +G  +  I 
Sbjct: 256 LEYSAVET-------------------------SRGILIVASQLLGSLMQIFGFDEFSIL 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            T  G+ LEN    HP   R   +VI GD++TTE+GTG VHTAPGHG EDY+  LKYGL 
Sbjct: 291 ATFPGAVLENSVCGHPFIERD-SMVIMGDHVTTEAGTGAVHTAPGHGMEDYIVGLKYGLE 349

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
             +PVD+ G F  E   F G+ +    N A+++++ +  SL+     EH YP+ WR KKP
Sbjct: 350 PYNPVDNHGVFRAEVPHFGGMHI-NKANPAIIEHMKQSGSLLAGSRIEHSYPHCWRCKKP 408

Query: 301 TIFRATEQWFASVE--GFRQAAMDAIG-QVKWVP 331
            I+RAT QWF S+E    R+ ++  I  +V WVP
Sbjct: 409 VIYRATPQWFISMEHNDLREKSLQQIKEEVTWVP 442



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 182/330 (55%), Gaps = 29/330 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGAD+LRLWV++ DY  D+ I  +++ ++++ YR++R T RY+LGNL+D+  + ++I Y 
Sbjct: 621 YGADILRLWVAAEDYRDDLRISDEIINRLAESYRRIRNTARYMLGNLYDFNPLTDAILYG 680

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           D+   D+YAL +     K + ++YE+Y+F  I+     F  VD+S  Y D+ KDRLY   
Sbjct: 681 DMLEFDRYALARYHAFEKRVLDAYENYEFHVIYHACNNFCSVDMSAQYLDIIKDRLYAED 740

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
              F RRS Q+ L   L  ++R++AP+L    E+V+Q+L     L      +F       
Sbjct: 741 ADGFKRRSAQSALHLILSGMMRLLAPVLSFTMEEVYQHLNEPEKLASVHLLDFP------ 794

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             + +   F    +  W ++++LR++V+K LE+AR  K+IG SL+A+V ++++D    + 
Sbjct: 795 --EPRGEFFNEALMARWDRLMKLRSDVSKALELARNEKVIGHSLDARVRVYSNDRETVAF 852

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L     A+     L+   I+SQ+ V            P SG  L E ++ + + VS+A G
Sbjct: 853 LESFTNAE-----LRDSCIVSQLSVE-----------PLSG--LEELENGLLVEVSKALG 894

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +KCERCW      G   +   LC RC  V+
Sbjct: 895 AKCERCWISDVDTGK--QETGLCPRCAAVI 922


>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 949

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/344 (42%), Positives = 194/344 (56%), Gaps = 46/344 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW  PYLT+D  YEAA    F    L G I R +KPVHW  S  TALAEAE+
Sbjct: 140 FARLGVLGDWQQPYLTIDYSYEAAIAREFNNFLLNGAISRSRKPVHWCASCTTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVF-RMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVAVN 119
           EY E H S SIY  F    +A  S +  + E   D   L + +WTTTPWT+PAN AVA++
Sbjct: 200 EYAEQH-SPSIYVKFPLAPAAVASLAAAVPELAVDERPLAVVIWTTTPWTLPANLAVALH 258

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT---K 176
               YA VE                   G +L        I+A++LV  + A+ G    K
Sbjct: 259 PDFTYAAVE-----------------HDGEIL--------IMAAELVERVMAECGLSDYK 293

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           L+     A    ++CR  HP+  RQ  ++I  DY+T ESG+G VHTAPGHG++DY++ LK
Sbjct: 294 LLASFPAAALLGQSCR--HPLLERQ-SLLIAADYVTLESGSGCVHTAPGHGRDDYLSGLK 350

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           + LPILSPVD+ G FT EAG + GL +L  GN  ++  L    +L+ E+   H YP+ WR
Sbjct: 351 HNLPILSPVDERGHFTAEAGPYEGLFIL-KGNKRIIADLQAGGALLGEQAITHSYPHCWR 409

Query: 297 TKKPTIFRATEQWFASVEG---------FRQAAMDAIGQVKWVP 331
            KKP +FRATEQWF +++           R+ A+ AI +V+W+P
Sbjct: 410 CKKPVMFRATEQWFIAMDAACGDDPEQTLRRRALAAIDEVEWIP 453



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 188/359 (52%), Gaps = 26/359 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    ++G V   P +    +GA++LRLW +S DY  D+ I   +LRQ++D YRK
Sbjct: 608 VDGQGKKMSKSVGNVI-APDKIIKQHGAEILRLWAASEDYRDDIRISENILRQLADAYRK 666

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
            R T+R++LGNLHD+    +    + +  +D++ L + E   +  +ESY+ ++F + +  
Sbjct: 667 TRNTIRFMLGNLHDFEPARHRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQ 726

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +  F  V LS  Y D+ KDRLY        RR  Q+VL      ++R++AP+L  LA + 
Sbjct: 727 LYNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEA 786

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF-WGKILELRTEVNKVLEVA 550
           W++LP      D      VF + +P    +      GE+   W KI+ +R+E+ + LE+A
Sbjct: 787 WEHLP-----ADDKRPASVFLADFPT--ARPERLADGELLARWEKIMAVRSELTRALEIA 839

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFII---SQVEVLPSTPN 607
           R  K+IG SL+A++ L    A+ +   R++  A  +   LQ + I+   S  E +P+   
Sbjct: 840 RRDKVIGHSLDAEIQL----AATSGPWRDLIAA--NWQILQEVTIVSVMSHAEAIPAAAE 893

Query: 608 GLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G    I Y GE + +    + + +  A G KC RCW  +  VG   EHP +C RC   L
Sbjct: 894 G---EIFYQGEEIAD----LQVLIRPAAGEKCARCWMRTAGVGEHSEHPGVCHRCAGAL 945


>gi|260663602|ref|ZP_05864491.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260551828|gb|EEX24943.1| isoleucyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 930

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 201/330 (60%), Gaps = 35/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W++PYLTL  E+EAAQI+VFG  + +G +Y+ KKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWDHPYLTLAKEFEAAQIKVFGAFAKRGLLYQAKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  V+++ +   ++        GLL+    D  L  WTTTPWT+PA+ AVAV+A  +
Sbjct: 199 EYHDV-VAKTAFFTEQVQDG----KGLLDS---DTYLVGWTTTPWTIPASEAVAVSADFE 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA+V                  +P     D+K    +VA+ L+  L  K+  T   + KT
Sbjct: 251 YALV------------------KPSG--SDRK---YVVAASLLGDLAQKFNWTDYQVVKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G+++E     HP  +R+  V +  DY+T ++GTGLVHTAPG+G +DY    KY LPI 
Sbjct: 288 FKGAEMEGMTTKHPYIDRELLVGL-ADYVTDDAGTGLVHTAPGYGDDDYNFGKKYNLPIF 346

Query: 243 SPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +P++D+G  T E G +F G+    D +   ++ L+E  +L++EE  EH YP+DWRTKKP 
Sbjct: 347 APMNDQGVLTAENGPEFDGV-FYQDADDISLRLLEEHDALLLEEDLEHSYPFDWRTKKPI 405

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRAT+QWF S++  R   + A+ +V + P
Sbjct: 406 VFRATDQWFVSIDKMRDEILKAVDEVTYYP 435



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 161/340 (47%), Gaps = 50/340 (14%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           GA+++RLWV S D + DV +  + L+Q+++ YRKLR T R+LL N  D+   N ++Y+  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMETLQQIAESYRKLRNTFRFLLANTSDFGPENFVAYEKR 674

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQY        +  +R+ ++ Y F   ++ +  F+  DLS+FY +VAKD LY     
Sbjct: 675 EAVDQYMTVNFNRFLAGMRDEFDRYDFLNAYKHLINFVNNDLSSFYMNVAKDVLYIEPED 734

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ------------NLPFAYTLEDGSA 506
           S  RRS Q      L  + +++ PILPH  E+VW              +P A T E+G+A
Sbjct: 735 SHVRRSMQATFYEILSGLTKLLTPILPHTTEEVWSYMDEPEDFVQLTEIPEARTFENGNA 794

Query: 507 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
                      L EKW  F           +ELR+ V K LE AR  KLIG SLEA   L
Sbjct: 795 -----------LLEKWEGF-----------MELRSHVLKCLEEARNAKLIGRSLEASADL 832

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +   AS    L ++ T   DA  L  +  +S  +             P   E      D 
Sbjct: 833 YL-TASQQELLADLGT---DAGLLCGVSALSVHDA---------SEAPAEAESF---SDN 876

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + V  A+G  C+RC      VGS   +  LC+RC +++
Sbjct: 877 AAVLVQAAKGEVCDRCRMTKEDVGSDPAYQQLCARCAKLV 916


>gi|331701068|ref|YP_004398027.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128411|gb|AEB72964.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 934

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PYLTL PE+EA ++ VFG  + +G IY+GKKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDDPYLTLKPEFEAQEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDITSPTAFYGEHVV-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITVDAGFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV+     EG++                      ++A++LV  +    G T +   KT
Sbjct: 251 YSVVQP----EGETRK-------------------FVIATELVDKVADLIGWTNVKTIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE     HP D+ +  + + GD++  E GTGLVHTAPG+G++D+    +YGL I 
Sbjct: 288 VKGQDLEGILAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTAPGYGEDDFNIGRQYGLDIF 347

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T+E+G+ F+G+    D N   +  L +   L+   P +H YP+DWRTKKP 
Sbjct: 348 APVDDKGYLTKESGEDFAGV-FYDDANKIALDKLKDAKLLLHYMPLKHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 407 IFRATPQWFASVDKIKDEILKSLDDVQFFP 436



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 161/334 (48%), Gaps = 30/334 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++DD
Sbjct: 616 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRFLLANTSDFDPKENTVAFDD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY L      + + R   E Y F    + +  FI  DLS FY D+AKD +Y    
Sbjct: 676 LESQDQYMLVLFNKFLADTRSYMERYDFLDWNKKVVGFITNDLSAFYLDIAKDIVYIDKQ 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+    + + +++ P+LPH  E++W  L            EFV  +  P 
Sbjct: 736 DGHKRRSMQTVMYEIAVGLTKLMTPVLPHTTEEIWGFL--------HEPEEFVQLTDIP- 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + K        +  W K    R +V KVLE AR  K IG S EA + ++   + +A  +
Sbjct: 787 -EPKKYDHDSEILANWTKFRSYRDDVLKVLEEARDAKKIGKSSEAALTIYA-TSEVADLM 844

Query: 578 REMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
             + T       L  + ++SQ+ +      P+   +             D + + V  AE
Sbjct: 845 DSLQT------DLATVLMVSQLTMKDFADAPDDSTKF----------DSDGLALSVEPAE 888

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           G  CERC      VG+  ++PT C  C +++  Q
Sbjct: 889 GKTCERCRLVRQDVGADSDYPTFCQSCAQIVRDQ 922


>gi|335429595|ref|ZP_08556493.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
 gi|334889605|gb|EGM27890.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
          Length = 912

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 192/330 (58%), Gaps = 39/330 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W  PY+TL   YEA Q+++F +M  +G IY+G +PV+WS SS TALAEAE+
Sbjct: 142 FKRLGVMGEWEQPYITLQKNYEARQLKLFAKMVEKGLIYKGLRPVYWSWSSETALAEAEI 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +IY  F ++       G       D    +WTTTPWT+PAN A+ ++ +L+
Sbjct: 202 EYHDKK-SPAIYVAFNVMDGKGVLDG-------DEQFIIWTTTPWTIPANLAICLHPELE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL--EAKWGTKLVIKK 181
           Y+VV    L++G+                       IVASDLV +L  E +W     I K
Sbjct: 254 YSVV----LVDGNK---------------------YIVASDLVESLTEEFEWSNPKTI-K 287

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G++LE+ +  HP+ +R   + + G+++T ++ TG VHTAPGHG++D+    +YGL  
Sbjct: 288 TYQGAELEHVKTKHPLYDRVSLITL-GEHVTADA-TGCVHTAPGHGEDDFNIGKQYGLEP 345

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           L PVDD G  T+EA  F GL +    N A+ + L+   +LI      H YP+DWRTKKP 
Sbjct: 346 LCPVDDRGIMTKEAPGFEGLHI-DKANKAITEKLEATGALIKLSFINHSYPHDWRTKKPI 404

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFR T QW+AS++G +   M  I  VKW+P
Sbjct: 405 IFRVTPQWYASIDGLKDTMMKEIESVKWLP 434



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 175/329 (53%), Gaps = 31/329 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD+LRLWVSSVDY  DV I   +++Q+++ YRK R T R+LLGNLHD+    + + Y+ 
Sbjct: 613 GADILRLWVSSVDYQADVRISDNMMKQIAESYRKFRNTFRFLLGNLHDFDPKSDYVDYEK 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
              +DQY   +L ++VK +  +YE+++F  +++ +  ++   LS+FY D  KD LY    
Sbjct: 673 RNEVDQYVTCKLNDLVKEVLHAYENFEFDVVYRKMTNYVTQFLSSFYLDFTKDILYIEKD 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS Q+VL  ++  + R++APIL H  ++V+Q +P       G   E +  +  P 
Sbjct: 733 NSLDRRSIQSVLYDNIDRLSRLLAPILSHTTDEVYQYIP-------GKKEESIHLTDMPK 785

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
             E      + + Y   + L LR ++ K LE AR  K+IG S  AK+ ++ +D  L   L
Sbjct: 786 PIEIAEDEALKQRY--DQFLILRRDILKALEEARNKKIIGKSFNAKLTIYPND-ELVHLL 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            ++     DA+  Q+IFI+SQ E             P +        ++V + V  A G 
Sbjct: 843 NQL-----DAN-FQQIFIVSQFE------QKTFDEAPETAMTF----EQVKVLVEPALGH 886

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RCW    Q+   V    +CSRC EV+
Sbjct: 887 TCARCW----QIVENVNEDEICSRCEEVI 911


>gi|406026565|ref|YP_006725397.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri CD034]
 gi|405125054|gb|AFR99814.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri CD034]
          Length = 934

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 194/330 (58%), Gaps = 34/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW++PYLTL PE+EA ++ VFG  + +G IY+GKKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDDPYLTLKPEFEAQEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +     + Y    +        G+L++   D  + VWTTTPWT+PA+  + V+A   
Sbjct: 199 EYHDITSPTAFYGEHVV-----DGKGVLDD---DTYMVVWTTTPWTIPASEGITVDAGFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV+     EG++                      ++A++LV  +    G T +   KT
Sbjct: 251 YSVVQP----EGETRK-------------------FVIATELVDKVADLIGWTNVKTIKT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G DLE     HP D+ +  + + GD++  E GTGLVHTAPG+G++D+    +YGL I 
Sbjct: 288 VKGQDLEGILAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTAPGYGEDDFNIGRQYGLDIF 347

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +PVDD+G  T+E+G+ F+G+    D N   +  L +   L+   P +H YP+DWRTKKP 
Sbjct: 348 APVDDKGYLTKESGEDFAGV-FYDDANKIALDKLKDAKLLLHYMPLKHSYPFDWRTKKPI 406

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 407 IFRATPQWFASVDKIKDEILKSLDDVQFFP 436



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 161/334 (48%), Gaps = 30/334 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++DD
Sbjct: 616 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRFLLANTSDFDPKENTVAFDD 675

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L   DQY L      + + R   E Y F    + +  FI  DLS FY D+AKD +Y    
Sbjct: 676 LESQDQYMLVLFNKFLADTRSYMERYDFLDWNKKVVGFITNDLSAFYLDIAKDIVYIDKQ 735

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RRS QTV+    + + +++ P+LPH  E++W  L            EFV  +  P 
Sbjct: 736 DGHKRRSMQTVMYEIAVGLTKLMTPVLPHTTEEIWGFL--------HEPEEFVQLTDIP- 786

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            + K        +  W K    R +V KVLE AR  K IG S EA + ++   + +A  +
Sbjct: 787 -EPKKYDHDSEILANWTKFRSYRDDVLKVLEEARDAKKIGKSSEAALTIYA-TSEVADLM 844

Query: 578 REMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
             + T       L  + ++SQ+ +      P+   +             D + + V  AE
Sbjct: 845 NSLQT------DLATVLMVSQLTMKDFADAPDDSTKF----------DSDGLALSVKPAE 888

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
           G  CERC      VG+  ++PT C  C +++  Q
Sbjct: 889 GKTCERCRLVRQDVGADSDYPTFCQSCAQIVRDQ 922


>gi|295105908|emb|CBL03451.1| Isoleucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 945

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 196/339 (57%), Gaps = 40/339 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLT  P YEA  +EVF +M L G +YRG+KP+HW     TALAEAE+
Sbjct: 135 FKRLGVNGDWEHPYLTFTPNYEAGNVEVFKKMYLDGSVYRGRKPIHWCKRCHTALAEAEI 194

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F+M   P        E   D  + +WTTTPWT+PAN AV++     
Sbjct: 195 EYSD-ETSPSIFVKFKMDLMPGMFEAAGAE--GDAYVLIWTTTPWTLPANTAVSLAPDAD 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVIKK 181
           Y +V    + +G +                     +I+A +LV  +   A W +  +++ 
Sbjct: 252 YVMV----VADGSN---------------------MIMARELVEQVAEIAGWESYDLVRG 286

Query: 182 T------LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
                  L G +     Y  P+       VI GD++T ESGTG VHTAPGHGQ+DY+ +L
Sbjct: 287 ADGEPVALKGREFTGLTYTCPIRQDLKGTVIYGDHVTLESGTGAVHTAPGHGQDDYLVAL 346

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           ++ +P+L PVDD G  T+EAG F+GLDV  + N A++++L E+ +L+ E+   H YP+ W
Sbjct: 347 EFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPAIIEWLRERGTLMAEKKILHSYPHCW 405

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAIG-QVKWVP 331
           R  +P IFRAT+QWF S++    R+ A+DAI  +V+++P
Sbjct: 406 RCHEPVIFRATDQWFVSMDKNSLREDALDAIDHKVEFIP 444



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 182/337 (54%), Gaps = 39/337 (11%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 396
           GADVLRLWV+SVDY+ DV IG ++L + S+ YR++R T+R+LLG+L D+  + ++++ ++
Sbjct: 627 GADVLRLWVASVDYSQDVNIGDEILERTSEAYRRIRNTMRFLLGSLSDFDDLKHTVTDWN 686

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +DQ+A+ +L +++ ++  +Y+ Y+F  +++ +  +I+ DLS  Y D  KDR+Y+  
Sbjct: 687 ALEPVDQWAMVRLWHLLVDVERAYDEYKFHMVYRAVYDYIVGDLSAVYMDATKDRVYSEA 746

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   +  +VRV+AP+L    ++VW++ P A    +G        + WP
Sbjct: 747 PDSPRRRAAQTVLMNIVEVLVRVLAPVLSFTTDEVWEHYPEAIRSREGRPGNVQL-AGWP 805

Query: 517 VLDEKWRTFP-------VGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
              +     P       + E +  G IL +R  V K LE AR  K++  S EA V +   
Sbjct: 806 EKSDFAPALPGDADAERIAEDF--GVILGVREIVTKALEDARGQKIVNKSQEADVTVTAP 863

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
            + L          ++DA   + +FI++ V                     VEG +++  
Sbjct: 864 RSVLDH------VEQYDAAVFEELFIVASVS-------------------FVEG-EELSA 897

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V +    KC RCWNY  ++G    HP++C RC +VL
Sbjct: 898 EVRKTTAEKCPRCWNYR-ELGGNPNHPSVCERCGDVL 933


>gi|302341853|ref|YP_003806382.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638466|gb|ADK83788.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 937

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/339 (42%), Positives = 188/339 (55%), Gaps = 48/339 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW +PYLT+   YEAA    F ++   G +YR KKPVHW    RTALAEAE+
Sbjct: 140 FVRLGVLGDWPDPYLTMKYSYEAAIAREFCRIYAGGGVYRSKKPVHWCMDCRTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVS--AP--PSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           EY + H S+SI+  FR+V    P  P  +G       D+ L +WTTTPWT+PAN AVA N
Sbjct: 200 EYHD-HKSKSIFVAFRLVDDLGPKYPELAGR------DVSLVIWTTTPWTIPANLAVAAN 252

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA----KWGT 175
            +L+YA VE                         + KV+I+ A      +EA     W T
Sbjct: 253 PELEYAAVE------------------------HEGKVYIMAARLAPLNMEAFGFQGWRT 288

Query: 176 KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
              +       DLE  +  HP+ +R   V +  DY+T E+GTGLVHTAPGHG+EDY T  
Sbjct: 289 LCAVDPL----DLEGKKAKHPLYDR-LSVGVLADYVTLEAGTGLVHTAPGHGREDYDTGR 343

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +YGL   +PVDD+G+FT EA  F G +V  + N A++  L E  +L+  E   H YP  W
Sbjct: 344 RYGLEPFAPVDDDGRFTAEAAPFEGQNVF-EANEAIIAALREAGALLAVEEISHSYPCCW 402

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
           R K+P IFRAT QWF S+E    R  ++ AI   V+WVP
Sbjct: 403 RCKQPVIFRATPQWFISMEENDLRARSLKAIQNDVRWVP 441



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 200/356 (56%), Gaps = 27/356 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    ++G V  + PQ+    YGA++LRLWV++ DYT D+ +   +L+Q+++ YR
Sbjct: 597 VDGDGRKMSKSLGNV--IAPQKVIDQYGAEILRLWVAAEDYTVDIRLSNDILKQLAEAYR 654

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           ++R T+R++LGNLHD+    ++++ D +  +D+  L +L+ ++  +R+ YE + F   F 
Sbjct: 655 RIRNTMRFMLGNLHDFDPQAHAVAPDQMGQMDRLMLHRLQELIGRVRKGYEDFAFHACFH 714

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +  + +VDLS FY DV KDRLYT       RR+ QTVL   L ++VR+ APIL   AE+
Sbjct: 715 GLHNYCVVDLSGFYLDVLKDRLYTCAPDDPARRAAQTVLYHTLSAMVRLAAPILSFTAEE 774

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           VW  LP A  +        + + +  +LD +      G    W ++LELR  VNK +++A
Sbjct: 775 VWDYLPGAKDMGQSVHMAALPQVEAALLDAEL----AGR---WARLLELRGAVNKAMDLA 827

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI 610
           R  K++G+SLEAK+ L   +  LA  + E      +A  LQ I ++SQ+E+ P+  N  +
Sbjct: 828 RKDKIVGNSLEAKLTLAA-EGDLADFIAE------NAAVLQEITMVSQLELAPALANPTL 880

Query: 611 RNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           ++    G         + IGV+ +   KC RCW     VG   + P LC RC  V+
Sbjct: 881 KSEETPG---------LLIGVTPSGHQKCARCWTRLESVGQLPDLPELCERCAAVV 927


>gi|395239330|ref|ZP_10417210.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
 gi|394476425|emb|CCI87187.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
          Length = 930

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 195/334 (58%), Gaps = 39/334 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR G+ ADW++PY+TL PE+EA +I VFG+M  +GYIY+GKKPV+WS SS + LAEA
Sbjct: 137 TDFKRLGILADWDHPYITLQPEFEAEEIRVFGKMFEKGYIYKGKKPVYWSWSSESTLAEA 196

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY +   S +IY  F +        G+L+    +    +WTTTPWT+PAN  ++VN +
Sbjct: 197 EVEYHDVK-SPNIYVAFPVKDG----KGILD--TENTYFIIWTTTPWTIPANLGISVNPQ 249

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
             Y+VV++     GD                   K +++  S L    E        + +
Sbjct: 250 FDYSVVQV-----GD-------------------KKYVVGTSRLEAVAETLGWENYEVVQ 285

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
            L GS+++     HP+ + Q  +V+ G ++T + GTGLVHTAPG G++D+    +YGLP+
Sbjct: 286 HLKGSEMDRMVAKHPLYD-QDSLVMTGMHVTADDGTGLVHTAPGFGEDDFNVGQRYGLPV 344

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            SP+D++G FT+E       D++G    D N  VV+ L+   +L+    + H YP+DWRT
Sbjct: 345 FSPIDNKGCFTDEV---PDPDLVGMFYDDANKVVVEKLEAVGALLKLSFFTHSYPHDWRT 401

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KKP IFRAT QWFAS+  FR   +D I +  ++P
Sbjct: 402 KKPVIFRATTQWFASISKFRNEILDEINKASFMP 435



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 166/337 (49%), Gaps = 43/337 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D T DV +   +L Q ++ YRK+R T RY+L N  D+    + + YDD
Sbjct: 615 GAEIIRLWVAQADTTSDVAVSYDILNQAAESYRKIRNTFRYMLANTSDFDPETDRVVYDD 674

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L ++VK+  ++Y+ + F  +F+ + +FI  DLS FY D AKD LY    
Sbjct: 675 LRSVDQYLEVKLNDLVKSCLDAYDRFDFTTVFKQVFKFISNDLSAFYLDFAKDVLYIEAQ 734

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +V+ PILPH  E++W                F+ E +  +
Sbjct: 735 NSKERRSMQTVIYDAAVKLAKVLTPILPHTMEEIWG---------------FLHEKEAYI 779

Query: 518 LDEKWRTFPVGEIYF--------WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
              +    P  E Y         W + + +R +V K LE AR  KLIG S EA V L+  
Sbjct: 780 ---QLTNMPEVETYANHDELLADWQQFMAVRDDVLKALEEARNAKLIGKSFEAAVTLYP- 835

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
               +  +RE+    +    L+ I I+S++ +          N            + V +
Sbjct: 836 ----SEEVRELLAKLNSDSELREILIVSKLTISSEDAPASATNY-----------ENVAV 880

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V  AEG +C RC    T +G   + P LC RC +++
Sbjct: 881 SVEPAEGEECPRCRMIRTDLGEDKDLPQLCGRCAKIV 917


>gi|366053396|ref|ZP_09451118.1| isoleucyl-tRNA synthetase [Lactobacillus suebicus KCTC 3549]
          Length = 932

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 190/329 (57%), Gaps = 32/329 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +WNNPYLTL  EYEAAQ+ VFG  + +G +YRGKKPV WS SS +ALAEAE+
Sbjct: 139 FKRLGVAGEWNNPYLTLQKEYEAAQVRVFGAFAKRGLLYRGKKPVFWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           +Y +     + Y   ++V       G+L++   +  + VWTTTPWT+P +  + ++A   
Sbjct: 199 DYKDVTSPSAFYGE-QVVDG----KGVLDD---NTYMVVWTTTPWTIPGSEGITIDATFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YAVV                 +  G+   D+K  F++ A  +    E      + I KT+
Sbjct: 251 YAVV-----------------THSGD---DRK--FVLAAELVNKCAELFEWEDVKILKTV 288

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G DL+     HP    +  V + GD++T ++GTGLVHTAPG G++DY    +YGL I  
Sbjct: 289 KGKDLDRVTAQHPFFPEKKLVTMLGDFVTLDAGTGLVHTAPGFGEDDYYVGKQYGLDIFV 348

Query: 244 PVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           PV+D+G  T+EAG  F G+    D N   +  L +Q  L+   P +H YP+DWRTKKP I
Sbjct: 349 PVNDQGYLTKEAGPDFEGV-FYDDANQISLDKLKDQGLLLKYMPIKHSYPFDWRTKKPII 407

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT+QWFASV+  R   + AI  VK+ P
Sbjct: 408 FRATDQWFASVDKIRDEILSAIDDVKFYP 436



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 183/340 (53%), Gaps = 33/340 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +     GA+++RLWV SVD + DV +  ++ +Q+S+ YRK R T+R+LL N  D+   
Sbjct: 608 PNKVVKQMGAEIIRLWVMSVDSSADVRVSMEIFKQVSESYRKFRNTMRFLLANTTDFDPE 667

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +S+ YDDL  +D++ L +L   V++  + +++Y+F  I++ +  F+  +LS FY +VAK
Sbjct: 668 KDSLKYDDLESVDKFMLVKLNEFVESTEKHFDNYEFLDIYKQLMNFVTTELSAFYMNVAK 727

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y  G  S TRRS QTV    L+++ +++ P+LPH  E++WQ L            EF
Sbjct: 728 DVVYIDGANSKTRRSMQTVFYKVLVTMTKLLTPVLPHTTEEIWQYLK--------EPEEF 779

Query: 510 VFESKWPVLDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           V  ++ P +D        GE   +  W   +E+RT V K LE AR  KLIG SLEA++ L
Sbjct: 780 VQLAEMPQVDHY-----EGEEELLKKWDSFMEIRTHVLKGLEEARNEKLIGKSLEARLDL 834

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +       S+  +      D +  Q +  +S + V        +   P   E   +G   
Sbjct: 835 YL------SQSNQDVLNSMDGNVRQWL-EVSDLHV------SSLEETPADAEKFNDG--- 878

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V + VS+A G  C+RC   +  VGS V +P LC+RC  ++
Sbjct: 879 VALKVSKAAGEVCQRCRMTTQDVGSDVAYPQLCARCAHIV 918


>gi|309778072|ref|ZP_07673011.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914166|gb|EFP59967.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 908

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/329 (40%), Positives = 186/329 (56%), Gaps = 35/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   GV  D+++PY+TL  ++EA QIE+F  M+L G IY+G KPV+WSPSS TALAEAE+
Sbjct: 139 FLSLGVVGDYDHPYITLTKDFEAHQIEIFASMALDGLIYKGLKPVYWSPSSETALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I+  F +        G+L+    D    +WTTTPWT+PAN  + +N    
Sbjct: 199 EYKDIK-SPTIFVKFPVKDG----KGVLD---SDTSFVIWTTTPWTIPANLGICLNKDYT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK-KT 182
           YA+VE                          +K  +IV  +LV  L  K+G +   K  T
Sbjct: 251 YALVE-------------------------SEKGKLIVLEELVNALWEKFGLERKEKLAT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             GS+LE     HP+ +R+  V++G D++T ++GTG VHTAPG G +D+    KYGLP  
Sbjct: 286 FKGSELEMITCQHPLYDRESLVMLG-DHVTADAGTGCVHTAPGFGADDFFIGQKYGLPAY 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
             VD+ G   E+AG +     + D N  V + LDE  +L+  E   H YP+DWRTKKP I
Sbjct: 345 CNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDELGALLKLEFITHSYPHDWRTKKPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++  R+  +  I  V W+P
Sbjct: 405 FRATTQWFASIDKIREQLLTEIANVDWIP 433



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 164/339 (48%), Gaps = 38/339 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---DW 387
           P +    YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D+
Sbjct: 604 PGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPDEDF 663

Query: 388 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + +   +LP +DQY L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D 
Sbjct: 664 TKDDLVDIHELPELDQYILVLLNEVNERAVKAYKEYRFADITNMLSNLMTNELSAYYMDY 723

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KD LY     S  RR  QTVL   +  +VR+ APIL H  E+V  N  F    +     
Sbjct: 724 TKDILYIEKKDSLRRRQVQTVLWHAINVLVRLWAPILVHTCEEV--NDFFHTEADSIHLG 781

Query: 508 EFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
            F        LD +       ++    +++ LR ++ K LE AR  K+IG SLEA V + 
Sbjct: 782 RFA-----QALDIEHAEEIKADM---ERMMALRQDIFKALEEARADKVIGKSLEAHVIVN 833

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKV 627
             D   A  + ++C +K       +  I+S+V               +S + L +  +  
Sbjct: 834 VSDEDRA-LIEKLCGSK-----FNQWLIVSKV--------------SFSVDELKQ-YEAC 872

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V + EG  C RCWN +           LC+RC  VL
Sbjct: 873 QVAVEKCEGMVCPRCWNITDSDAE----DGLCARCAAVL 907


>gi|160914286|ref|ZP_02076507.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
 gi|158433913|gb|EDP12202.1| isoleucine--tRNA ligase [Eubacterium dolichum DSM 3991]
          Length = 908

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 187/329 (56%), Gaps = 35/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F   G   D++N Y+TL  E+E  QI +FG+M++ G IY+G KPV+WSPSS +ALAEAE+
Sbjct: 139 FLSLGSVGDYDNAYVTLTKEFEEEQIRIFGKMAMDGLIYKGLKPVYWSPSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I+  F +        G+L+    D    +WTTTPWT+PAN A+ +N    
Sbjct: 199 EYHDIK-SPTIFVKFMVKDG----KGILDN---DCAFVIWTTTPWTIPANLAICLNKDFT 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK-KT 182
           YA+VE +                         K  +IV  +L+ +L  K+G +   K  T
Sbjct: 251 YALVETE-------------------------KGKLIVLEELMDSLFDKFGLETRNKLAT 285

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE     HP+ +R+  V++G D++T ++GTG VHTAPG G +D+    KYGLP  
Sbjct: 286 FKGKELEMITCAHPLYDRESLVILG-DHVTADAGTGCVHTAPGFGADDFFVGQKYGLPAY 344

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
             VD+ G   +EAG++     + D N  V + LDE  +L+  E   H YP+DWRTKKP I
Sbjct: 345 CNVDEHGCMMKEAGEWLEGQYVDDANKTVTQKLDEIGALLKLEFITHSYPHDWRTKKPII 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS++  R   +D I +V W+P
Sbjct: 405 FRATTQWFASIDKIRTQLLDEIDKVDWIP 433



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 162/343 (47%), Gaps = 47/343 (13%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWR 388
           P +    +GAD+LRLW +SVDY  D  +  ++++Q+S+ YRK+R T R+LL N++  D+ 
Sbjct: 604 PGEITKKFGADILRLWAASVDYQADCSMSDEIMKQVSENYRKVRNTFRFLLANINEEDFT 663

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + +    LP +D+Y L QL  +    +++Y+ Y+F  +  ++   +  D S +Y D  
Sbjct: 664 KEDLVDIATLPELDKYMLLQLNEVNDKAKKAYKEYRFADVTTMLTTLMTNDFSAYYLDYT 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLED----G 504
           KD LY        RR  QTVL   +  ++R+ APILPH AE+V     F +  E+    G
Sbjct: 724 KDILYIEKKDDVRRRQVQTVLYHAVNVLMRLWAPILPHTAEEVND---FFHGEEESVHLG 780

Query: 505 S-AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
           S A+  V E    +  +  R            +L LR+++ K LE AR  K+IG SLEA 
Sbjct: 781 SFASNLVIEHADEIKTDMER------------MLLLRSDIFKALEEARGEKVIGKSLEAH 828

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           V +   D   A  L E     H      +  I+S+V         +    PY        
Sbjct: 829 VIVHVSDEDRA--LIEKVCGSH----FHQWLIVSKVSF------SVDELTPY-------- 868

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +     V + +G  C RCWN +           LC RC +VL
Sbjct: 869 -EVCSASVEKCDGHVCPRCWNITDSTAE----DGLCERCAKVL 906


>gi|377557351|ref|ZP_09787001.1| Isoleucyl-tRNA synthetase [Lactobacillus gastricus PS3]
 gi|376165757|gb|EHS84698.1| Isoleucyl-tRNA synthetase [Lactobacillus gastricus PS3]
          Length = 939

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 191/336 (56%), Gaps = 40/336 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  +W+NPY+T   EYEAAQI+VFG ++ +G +YRGKKPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGEWDNPYVTYAHEYEAAQIKVFGALAEKGLLYRGKKPVYWSWSSESALAEAEV 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           +Y +     + Y             G+L+    D    VWTTTPWT+PA+  + V A   
Sbjct: 199 DYKDITSQSAFYG-----ERVKDGKGVLDN---DTYFLVWTTTPWTIPASEGIVVGADFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y      SL   D                D KK   +VASDLV  L  K+G   +   KT
Sbjct: 251 Y------SLFTHDD---------------DPKK--YVVASDLVEKLSEKFGWHNVQTLKT 287

Query: 183 LAGSDLENCRYVH------PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             G++ E     H      P    +  +V+ GD++TT  GTGLVHTAPG+G +DY   +K
Sbjct: 288 YKGAEFEYMTAEHAFSSVDPFYKDREVLVMLGDFVTTSDGTGLVHTAPGYGDDDYQVGIK 347

Query: 237 YGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           YGLP+ +PV+D+G  TEEAG  F+G+    D     +K L++   L+++E   H YP+DW
Sbjct: 348 YGLPVFAPVNDQGYQTEEAGPDFAGV-FYQDSEAIALKKLEDADLLVLQEDVTHSYPFDW 406

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RTKKP IFRAT+QWF S++  R   + A+ +V + P
Sbjct: 407 RTKKPIIFRATDQWFVSIDKMRDDILKAVDEVTYYP 442



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 179/361 (49%), Gaps = 38/361 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +++G  +    ++G V  + P E     GA+++RLWV S D + DV +    L+QMS+ Y
Sbjct: 596 TLDGEGKKMSKSVGNV--IDPNEVVEKMGAEIIRLWVMSADTSADVRVSMGTLQQMSEAY 653

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           RKLR T R+LL N  D+    N + Y DL  +DQY   +    +K++RE  + Y F   +
Sbjct: 654 RKLRNTFRFLLANTSDFDPKTNRVDYADLSSVDQYMAVKFNRFLKHMREYMDQYDFLDSY 713

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           +++  F+  DLS FY +VAKD LY  G  S TRRS QTV    L+ + +++ P LPH  E
Sbjct: 714 KLLINFVNNDLSAFYMNVAKDVLYIDGEDSQTRRSMQTVFYDILVGMTKLLTPFLPHTTE 773

Query: 490 DVWQNLP----FAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNK 545
           +VW+ LP    +    E   A  F  E      DE   T        W   +ELR+ V K
Sbjct: 774 EVWEYLPEPEEYVQLTEIPEAVSFDQE------DELLAT--------WDAFMELRSHVLK 819

Query: 546 VLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST 605
            LE AR  KLIG SLEA+  L+       S+   +     DA  +   F +S + V    
Sbjct: 820 ALEEARDAKLIGRSLEAEADLYV----TPSQQTTLDNLNADAALM---FGVSNLRVHS-- 870

Query: 606 PNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEV 665
               +   P   E      DK  + VS A+G  CERC      VGS  + P LC+RC ++
Sbjct: 871 ----VDETPADAEVF---NDKAAVKVSVAQGETCERCRMVKEDVGSDPDFPQLCARCAQL 923

Query: 666 L 666
           +
Sbjct: 924 V 924


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 196/341 (57%), Gaps = 44/341 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW +PYLT  P YEA  +EVF +M L G +YRG+KP+HW     TALAEAE+
Sbjct: 143 FKRLGVNADWEHPYLTFTPNYEAGNVEVFKRMYLDGSVYRGRKPIHWCKRCHTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY +   S SI+  F+M   P    T+G       D  + +WTTTPWT+PAN AV++   
Sbjct: 203 EYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIWTTTPWTLPANTAVSLAPD 257

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVI 179
             Y +V+         A  +N                +I+A +LV  +   A W +  ++
Sbjct: 258 ADYVMVQ---------ADGSN----------------MIMARELVEQVAEIAGWESYDLV 292

Query: 180 KK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
           +        L G +     Y  PV       +I GD++T +SGTG VHTAPGHGQ+DY+ 
Sbjct: 293 RGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDSGTGAVHTAPGHGQDDYLV 352

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L E+ +L+ ++   H YP+
Sbjct: 353 ALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWLRERGTLVAQKEILHSYPH 411

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
            WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 412 CWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 33/333 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 396
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A     G        + WP
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQAMRERAGRPTNVQL-AGWP 813

Query: 517 VLDEKWRTFPV-GEIYF--WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
              +     P  GE     +G I+ +R  V K LE AR  K++  S EA V +    A L
Sbjct: 814 KASDFAPAIPADGERVSEDFGVIMGVREVVTKALEDARGQKVVNKSQEAAVVVTAPRAVL 873

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            +        ++DA   + +FI++ V                      EG +++   VS+
Sbjct: 874 DA------VERYDAAVFEELFIVASVS-------------------FAEG-EELAATVSK 907

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            E  KC RCWN+   +G    H ++C RC + L
Sbjct: 908 TEAEKCPRCWNHRA-LGGNANHGSVCERCGDAL 939


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 184/332 (55%), Gaps = 31/332 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR G++ +W++PYLT+   YEAA      + + +G +Y+GKKPVHW  S  TALAEA
Sbjct: 138 SEFKRLGIFGEWDDPYLTMHDSYEAATARELARFAERGGLYKGKKPVHWCSSCVTALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           E+EY + HVS SI+  F  V   P     L      L   +WTTTPWT+PAN  + +N +
Sbjct: 198 EVEYAD-HVSPSIFVKFPYVDTLPVELNALEG--KSLYFVIWTTTPWTIPANLGICLNPE 254

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
           L Y  VE+     GD    A    +   VLK+ +    ++AS   P  E K         
Sbjct: 255 LDYVAVEVAG---GDVLVLAEGLYQ--GVLKELELEGQVIASFKAPLFENK--------- 300

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
                    CR  HP   R   +VI GD++T E+GTG VHTAPGHG +DYV  LKYGL I
Sbjct: 301 --------RCR--HPFYERD-SLVILGDHVTLEAGTGCVHTAPGHGHDDYVVGLKYGLDI 349

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            +PVDD G++ ++   F G+  L + N AV   L E  +L+     EH YP+ WR KKP 
Sbjct: 350 YNPVDDYGRYRKDVELFGGMK-LAEANDAVCDKLTEVGALLKVSKVEHSYPHCWRCKKPV 408

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRAT QWF S+E    RQ A+  I  V+W+P
Sbjct: 409 IFRATAQWFISMEKNDLRQQALKHINDVQWIP 440



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 191/330 (57%), Gaps = 26/330 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA+VLRLWV++ DY  D+ I  ++L+++SD YR++R T RY+L N++D+    +S++  
Sbjct: 620 FGAEVLRLWVAAQDYQDDIRISQEILQRLSDAYRRIRNTARYILSNIYDFDPATDSVADG 679

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           DL  +D++AL +LE++V  + ++Y  Y+F  ++  +  F  V+LS+ Y D+ KDR+YT  
Sbjct: 680 DLLELDRWALSRLESLVGRVEKAYNDYEFHMLYHAVHNFCSVELSSIYLDILKDRVYTAA 739

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QT +   L ++ R+IAP+L   A+++W  +P       G     V  + +P
Sbjct: 740 PNSVARRSAQTAMYRILDALTRLIAPVLSFTADEIWAQMP-------GEREASVHLAGFP 792

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             +       + ++Y   ++  +R+EV+K LE+AR  KLIG+SLEAKV +   D +  + 
Sbjct: 793 RFETSLLDSGLDDLY--QQLWTVRSEVSKALELARDAKLIGNSLEAKVTVAVSDDACRTL 850

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L +       A+ L  ++I+SQ ++  S  +G          Y  E  D + I V +A G
Sbjct: 851 LEKY------AEQLPTLWIVSQTDLAESVADG----------YASEKIDGLKILVEKAAG 894

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCWNYSTQ+G   +HP  C +C   L
Sbjct: 895 DKCERCWNYSTQLGEDSDHPQACPKCLAAL 924


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29.1|SYI_PETMO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/332 (41%), Positives = 185/332 (55%), Gaps = 43/332 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV   W+ PYLTL PEYEA  +E+   +   G IYRG KP++W    +TALAEAE
Sbjct: 139 SFKRLGVIGFWDKPYLTLKPEYEAKVLEILRSIVESGNIYRGTKPIYWCTECQTALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY + H S SIY  F +V       G  N ++      +WTTTPWT+PAN A+AV+   
Sbjct: 199 VEYHD-HTSDSIYVKFPLV-------GENNTYV-----IIWTTTPWTLPANVAIAVHPNF 245

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV-PTLEAKWGTKLVIKK 181
            YA VEI                  GN        + I+A +LV  TL+        I  
Sbjct: 246 DYAKVEI------------------GNE-------YWIMAKELVDKTLKEAGIDDYKIID 280

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  G  LE  +  HP  +R+  +V+  DY+T + GTG VHTAPGHG EDY+T  KY L +
Sbjct: 281 TFKGLTLEGEKARHPFVDRESLLVLA-DYVTLDEGTGCVHTAPGHGMEDYITGTKYNLQV 339

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           +SPVD +G FT+EAGK+ G+ +  + N  ++K L E   L+      H YP+ WR K P 
Sbjct: 340 ISPVDSQGYFTDEAGKYKGMKIW-EANKEIIKDLKENGFLVQSGKITHSYPHCWRCKNPV 398

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRAT QWF  +E   +R+  ++ I +V W+P
Sbjct: 399 IFRATPQWFIDLEKNNYREKVLEEIKKVNWIP 430



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/330 (37%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LRLWV+S DY  D+ I   +L Q  + YRKLR T+R+LLGN++D+    +S++Y+
Sbjct: 611 YGADILRLWVASADYRMDIKISYNILEQQVETYRKLRNTIRFLLGNINDFDPDEDSVAYE 670

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  IDQ+AL +L N++KN+ ++Y++Y+F+K+  +I  F  +D+S+ Y D+ KDR+Y  G
Sbjct: 671 EMLEIDQWALMKLHNLIKNVTKAYDNYEFYKVHYLINNFCTIDMSSTYLDIIKDRIYVEG 730

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QTVL    +++ ++I+PILP  AE+V+++L ++      +  E +F   WP
Sbjct: 731 KKSKLRRSAQTVLYETAIALNKMISPILPFTAEEVYEHLNYS------NKYETIFAELWP 784

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              E + +  + E   W KI  LR +V K LE  R  K +G+SL+AK+ L   D +L   
Sbjct: 785 EYKENYLSEELEEK--WNKIFALREDVLKALEEKRKEKFLGNSLDAKIILNLKDDTLKQI 842

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L     +++D + +  +FI+SQ E   +   G      + G Y         I V++AEG
Sbjct: 843 L-----SQYDNNWIADLFIVSQFE-FGNVDEG------FEGRYAT-------IKVTKAEG 883

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            KCERCW       +  + P +C RC  VL
Sbjct: 884 EKCERCWKVDPNTDNDPDFPGVCPRCARVL 913


>gi|298529299|ref|ZP_07016702.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510735|gb|EFI34638.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 937

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/336 (41%), Positives = 188/336 (55%), Gaps = 41/336 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W++PY T+ P+YEAA     G+    G + RGKKP++W    RTALAEAE+
Sbjct: 141 FKRLGVLGVWDDPYQTMHPQYEAATARELGRFIQNGQVIRGKKPIYWCIDCRTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLA-VWTTTPWTVPANAAVAVN 119
           EY + H S SIY  F     P   +GL   F    PD   A +WTTTPWT+P N A+A +
Sbjct: 201 EYDQ-HTSPSIYVAF-----PVKDTGLQKIFPQVDPDKTYALIWTTTPWTLPGNKAIAAH 254

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLV 178
             L+Y++V++                            F I+A +LV T    +G     
Sbjct: 255 PDLEYSLVQVDG-------------------------AFYILAGELVETAAGIFGWQDYT 289

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
               + GS+LE  +  HP   R  P V+ G Y++ ESGTGLVHTAPGHG+EDY T LKYG
Sbjct: 290 DMGRVRGSELEGLQARHPFLERSSPFVLAG-YVSLESGTGLVHTAPGHGREDYETGLKYG 348

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L +LSP+DD G+F +     +G +V  + N  VV  L+EQ  L  ++   H YP+ WR K
Sbjct: 349 LEVLSPLDDHGRFDDSVPFLAGKNV-HEANPLVVSRLEEQGLLPAQKKMTHSYPHCWRCK 407

Query: 299 KPTIFRATEQWFASVEG--FRQAAMDAIG-QVKWVP 331
           +P IFRAT QWF ++E    R  A++AI  QV+W+P
Sbjct: 408 QPVIFRATTQWFITMEANSLRHKALEAIKEQVQWIP 443



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 28/359 (7%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    +IG V  + PQE    YGA++LR+WVS+VDY  DV I  ++L ++ D YR
Sbjct: 601 VDGEGRKMSKSIGNV--IAPQEIIDKYGAEILRIWVSAVDYQEDVRISQEILTRLVDAYR 658

Query: 372 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           ++R T RY+L NL+D+    + + +  +  +D+Y L  +    + +  +YE ++F K++ 
Sbjct: 659 RIRNTCRYVLSNLYDFDPQKDMVDFGRMHPLDRYTLHLVMEKDQAMHRAYERFEFHKVYH 718

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            +    +++LS+FY D+ KDRLY     S  R+S Q+VL   L  +++ + PIL   AE+
Sbjct: 719 NLHNLCVLELSSFYLDIIKDRLYVPAPESLERKSAQSVLYHVLQVLLKNMLPILSFTAEE 778

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           ++++LP    L+  S   F +    P LD      P  E   W  +  +R EV + +E  
Sbjct: 779 IYRHLP--EKLQGDSDTVFGWR---PALDGVGPIEP-EEKELWDMVGRVRQEVTRAIEPL 832

Query: 551 RTGKLIGSSLEAKV--YLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
           R  K +G SL++ V  YL  D   L  +++E          L+ +FI+S+  + P    G
Sbjct: 833 RKSKELGHSLDSHVILYLEKDKLKLLGQVQEH---------LRDVFIVSKAGIRPLEEAG 883

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                        + ++ + I V RA G+KC RCW YS  +G   +   +C RC +V+ 
Sbjct: 884 -------QDSIAAQEEEGLRIEVRRAPGNKCPRCWVYSEDLGPDADADAVCPRCSQVVG 935


>gi|380095936|emb|CCC05983.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 927

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 194/340 (57%), Gaps = 36/340 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V +DW N + T+D  +E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 135 MDSFRTYAVMSDWENRWTTMDRTFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S Y  F +     +  G L  F  +L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNETHISKSAYVRFPITKDSSTVPG-LEGFAGNLYAVIWTTTPWTLPANRAIAVHD 253

Query: 121 KLQYAVVEIQSLLEGDSA--APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
            L Y VV +     GD A         R   VL  +++   I+A                
Sbjct: 254 DLLYHVVRV-----GDDAYVVAEGGFERVAKVLLGEEETPEILA---------------- 292

Query: 179 IKKTLAGSDLENCRYVHPVDNRQC--PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
              T+ G  L   +Y++P+  +       I G ++T +SG+GLVH APGHG +DY+    
Sbjct: 293 ---TVPGCQLTQLQYINPLLGKSAVPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLICKD 349

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+P+ +PVD+ G FTEEA      +  G+ VL  G+ AV++   + +  + +  Y+HKY
Sbjct: 350 LGIPVSAPVDNYGIFTEEAYPDDPSRLEGVSVLEGGSAAVLELFKDNVLNVHK--YKHKY 407

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 408 PYDWRTKKPIIIRATAQWFADVDSIKELALKALEEVKFVP 447



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 156/344 (45%), Gaps = 41/344 (11%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 614 PPRDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 666

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S     L  +D  AL QL++ +  + + Y +Y+F K F  + R+I  DLS FY +  KD
Sbjct: 667 QSARTSPLTALDHIALVQLKDTMAEVEKHYRNYEFNKAFSSLNRWIANDLSAFYLEALKD 726

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY              VL    +  +R++API P L E+ W++ P  +  ED S    +
Sbjct: 727 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRPM-WMKEDSSVLHPL 777

Query: 511 FE-SKWPVLDEKWRTFPVGEIYFWGKI---LELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            +    P++D   R     E      I   +E    +    E+AR  K++GSSL   V +
Sbjct: 778 HQLYNSPLIDA--RRLSYDEAVLRKDIPVLMETHAAIKAASELARRAKVLGSSLACFVVI 835

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP---YSGEYLVEG 623
                S     R +   +   D L  +F++S V++      G++   P   Y  ++ + G
Sbjct: 836 NAPKDS-----RALSVLQKYKDELDAMFVVSSVDL-----GGVVEGEPTWKYVHDFEM-G 884

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                + V   +  KC RCW +           +LC RC +V+ 
Sbjct: 885 SQGCQVWVLPPKDHKCPRCWRFVAPAED-----SLCVRCEDVVG 923


>gi|451997524|gb|EMD89989.1| hypothetical protein COCHEDRAFT_1138808 [Cochliobolus
           heterostrophus C5]
          Length = 1015

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 190/341 (55%), Gaps = 33/341 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+ + V  +W N Y T++  +E  Q+EVF  M  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 149 SGFREWAVMGEWENAYQTMERGFELRQLEVFKVMFEKGLVYRQFKPVYWSPSSRTALAEA 208

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY EG  S + +  + +  +    +G+L     ++ + +WTTTPWT+PAN A+AV+  
Sbjct: 209 ELEYDEGFKSLAAFVRYPVKLSEALKAGVLKNVEDEVSVVIWTTTPWTLPANKAIAVHRD 268

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
           +QY +V+                   GN         I++A+  +P  E     KL ++ 
Sbjct: 269 MQYCIVK-----------------DAGN-----NNELILIATSRIPEYEKILEHKLEIVI 306

Query: 181 KTLAGSDLEN-CRYVHPVDNRQ-CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
             L GSDL N  +Y +P         +I  D++T  SGTGLVH APGHG +DY      G
Sbjct: 307 SELRGSDLANQVQYENPFQKASGLQPIIHADFVTDSSGTGLVHLAPGHGMDDYNVCTPLG 366

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGL---DVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           +P  +PVDD G FT++A         GL   D+   G+ AV  YL +   L  ++ Y HK
Sbjct: 367 IPAFAPVDDAGAFTKDAFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHK 426

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YP DWRTK+P I RATEQWFA+VEG + A+M AI  V + P
Sbjct: 427 YPIDWRTKEPVITRATEQWFANVEGIKDASMKAIANVAFKP 467



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 53/367 (14%)

Query: 333  QEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---- 385
            ++AP Y   GAD LRLW +S DYT DV IG  +L  ++    K R T ++LLG       
Sbjct: 669  RQAPTYDSMGADALRLWAASSDYTRDVTIGQPLLMSVNQALHKYRVTFKWLLGIFSLPSC 728

Query: 386  --DWRVGNSI---SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
               +   NS+   + D   + D+ A+ +L  +       + +Y FFK    + ++I +DL
Sbjct: 729  PPPFVSFNSLVPCTSDFGELTDRLAVHRLVQVSSEAHAHFANYDFFKGLNTLNKYIAMDL 788

Query: 441  SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
            S FYF+  KDR+YTG T     ++ Q VL      +++++AP+ P L E+VW ++P A  
Sbjct: 789  SAFYFETLKDRVYTGDTAD--GQTLQRVLGLIFYELLQMLAPVCPLLVEEVWDHVPAALR 846

Query: 501  LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
             +    A   +E    + + + ++         G +  L   +    E  R  K IGSSL
Sbjct: 847  DQSIHPARATWERLAALPESEAKSLE----RISGVVATLGAAIKIAQERVRAEKKIGSSL 902

Query: 561  EAKVYLFTDDASLASRLREMCTAKHD--------ADTLQRIFIISQ-------VEVLPST 605
            E    ++   +S+         A H          + L  +F+IS+       VE     
Sbjct: 903  ECAATVYLPASSINMLGEAFAAAMHPLNLKAEDMENQLAALFVISEMKRQWAWVEEEAMA 962

Query: 606  PNGLIRNIPYSGEYLVEGKD---KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            P+G             +G D   K  + V      KC RCW +  +     E   +C RC
Sbjct: 963  PSG------------DQGNDLLAKARVLVHPPSREKCPRCWRFVKE-----EAEDVCGRC 1005

Query: 663  YEVLAVQ 669
              V+  Q
Sbjct: 1006 AHVVEKQ 1012


>gi|442804071|ref|YP_007372220.1| isoleucine--tRNA ligase IleS [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
 gi|442739921|gb|AGC67610.1| isoleucine--tRNA ligase IleS [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
          Length = 953

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 197/330 (59%), Gaps = 29/330 (8%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR GV  DW +PY+TL P++EA QIEVFG+M+ +G IY+G +PV+W P   TALAEAE
Sbjct: 173 SFKRLGVVGDWEHPYITLLPQFEAKQIEVFGKMAERGCIYKGLRPVYWCPCCETALAEAE 232

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E   ++SIY  F +        G+++  L +  + +WTTT WT+P N A+AVN   
Sbjct: 233 IEYME-EKNQSIYVKFALKDDKGKLKGIVDS-LDNTYIVIWTTTTWTLPGNVAIAVNPDF 290

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            YAV+                  + GN      + +I+       T++        I   
Sbjct: 291 VYAVI------------------KAGN------ENYIMAKELAEATMKVAGIENYSIIGE 326

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY-GLPI 241
           L G+++E     HP  +R   +VI GD++T ++GTG VHTAPGHG ED+    KY GL +
Sbjct: 327 LTGAEMEYMVCRHPFLDRD-SLVITGDHVTLDAGTGCVHTAPGHGVEDFEVCRKYEGLKV 385

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           + PVD +G  TEEAG+F+GL      N  + K+L E  +L  ++  EH+YP+ WR K+P 
Sbjct: 386 IVPVDGKGVLTEEAGQFAGL-TYKQANKEIFKHLKETGALFADQVIEHQYPHCWRCKQPI 444

Query: 302 IFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           +FRATEQWF SVE F++ A++AI QV+W+P
Sbjct: 445 LFRATEQWFISVESFKKEALEAIKQVRWIP 474



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 185/335 (55%), Gaps = 39/335 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYD 396
           YGAD+LRLWV+S DY  D+ I   +++Q+++ YRK+R T R++LGN+ D+      + Y+
Sbjct: 653 YGADILRLWVASSDYKTDIRISNDIIKQLAENYRKIRNTARFILGNISDFDPETMMVPYN 712

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  ID++AL +L  +++ + +++  Y+F      +  F +VD+SNFY DV KDRLY   
Sbjct: 713 EMEEIDKWALMRLNGLIRKVEDAFSQYEFHSFTHNVHNFCVVDMSNFYLDVLKDRLYVSS 772

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RRS QT +   L S+VR++APIL   +E++W+ LP       G   E +  + WP
Sbjct: 773 PDDKKRRSAQTAMYIILDSLVRLLAPILAFTSEEIWKYLPH----RKGDNPESIQLNSWP 828

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT--DDASLA 574
           V++ ++     G    W +++E+R +V K LE AR  K+IG+SLEA+V L    DD    
Sbjct: 829 VVNPEYDN--PGLEQKWNRLIEIRDDVLKALENARNEKVIGASLEAEVRLKASGDDYKFL 886

Query: 575 SRLREMCTAKHDADTLQRIFIISQ--VEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
              R         D L  IFI+S   VE  P   N                   + I + 
Sbjct: 887 QENR---------DLLSMIFIVSNTVVEEDPKAQN-------------------IEITIV 918

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           RAEG KCERCW YS  VG   ++PTLCSRC E+L 
Sbjct: 919 RAEGEKCERCWVYSPTVGKNEKYPTLCSRCAEILG 953


>gi|451852151|gb|EMD65446.1| hypothetical protein COCSADRAFT_35497 [Cochliobolus sativus ND90Pr]
          Length = 1067

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 192/341 (56%), Gaps = 33/341 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + F+ + V  +W N Y T++  +E  Q+EVF  M  +G +YR  KPV+WSPSSRTALAEA
Sbjct: 173 SGFREWAVMGEWENAYQTMERGFELRQLEVFKVMFEKGLVYRQFKPVYWSPSSRTALAEA 232

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY EG+ S + +  + +  +    +G L +   ++ + +WTTTPWT+PAN A+AV+  
Sbjct: 233 ELEYDEGYKSLAAFVRYPVKLSEALKAGALRDVEEEVSVVIWTTTPWTLPANKAIAVHRD 292

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL-VIK 180
           +QY +V+         A   N+               I++A+  +P  E     KL +I 
Sbjct: 293 MQYCIVK--------DAGNNNE--------------LILIATSRIPEYEKILERKLQIIV 330

Query: 181 KTLAGSDL-ENCRYVHPVDNRQ-CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
             L GSDL +  +Y +P         +I  D++T  SGTGLVH APGHG +DY   +  G
Sbjct: 331 SELRGSDLADQVQYENPFQKASGLQPIIHADFVTDSSGTGLVHLAPGHGMDDYNVCMPLG 390

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGL---DVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           +P  +PVDD G  T++A         GL   D+   G+ AV  YL +   L  ++ Y HK
Sbjct: 391 IPAFAPVDDAGALTKDAFPEQPDLLEGLPVTDIKKSGSNAVCNYLQKLGLLRAKQNYRHK 450

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YP DWRTK+P I RATEQWFA+VEG + A+M AI  V + P
Sbjct: 451 YPIDWRTKEPVITRATEQWFANVEGIKDASMKAIANVAFKP 491



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 163/378 (43%), Gaps = 62/378 (16%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH------DWRVGNS 392
            GAD LRLW +S DYT DV IG  +L  ++    K R T ++LLG          +   NS
Sbjct: 702  GADALRLWAASSDYTRDVTIGQPLLMSVNQALHKYRVTFKWLLGIFSLPSCPPPFVSFNS 761

Query: 393  I---SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            +   + D   + D+ A+ +L  +       +  Y FFK    + ++I +DLS FYF+  K
Sbjct: 762  LVPSTSDFGELTDRLAVHRLVQVSSEAHAHFAKYDFFKGLNTLNKYIAMDLSAFYFETLK 821

Query: 450  DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
            DR+YTG T+    ++ Q VL      +++++AP+ P L E+VW ++P A  L+D S    
Sbjct: 822  DRVYTGDTSDC--QTLQRVLGLIFYELLQMLAPVCPLLVEEVWDHVPTA--LKDKSI--H 875

Query: 510  VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA----RTGKLIGSSLEAKVY 565
               + W  L       P  E     ++ E+   +   +++A    R  K IGSSLE    
Sbjct: 876  PARATWARL----APLPQSEAESLERMSEVVGTLGGAIKIAQERVRAEKKIGSSLECAAT 931

Query: 566  LFTDDASL-------ASRLREMCTAKHD-------------------ADTLQRIFIISQV 599
            ++   +S+       A+ +R +     D                   +DTL R  +  Q+
Sbjct: 932  VYLPASSIEMFCEAFANAMRPLRLKAEDMENQLAGLFVISEVRIRVLSDTLSRASLSGQL 991

Query: 600  EVLPSTPNGLIRNIPYSGEYLV-----EGKD---KVWIGVSRAEGSKCERCWNYSTQVGS 651
              +      + R   +  E  V     +G D   K  + V      KC RCW +  +   
Sbjct: 992  GFVAEDAEQMKRQWAWVEEEAVAASGDQGSDLLAKARVLVHPPSQEKCPRCWRFVKE--- 1048

Query: 652  FVEHPTLCSRCYEVLAVQ 669
              E   +C RC  V+  Q
Sbjct: 1049 --EAEDVCGRCAHVVGKQ 1064


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 190/340 (55%), Gaps = 29/340 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P +    YGA++LRLWVS+ DY  D+ I   +L+Q+SD YR++R T R++LGNL+D+   
Sbjct: 614 PKKVIDKYGAEILRLWVSASDYRDDIRISDNILKQLSDAYRRIRNTCRFMLGNLYDFDPA 673

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            + +SYD +P ID+YALF+L  + +    +Y+ Y+F  I+  +  +   DLS FY D+ K
Sbjct: 674 KDKVSYDLMPEIDRYALFRLSELTEKTARAYDLYEFHTIYHSLYNYCTTDLSAFYLDILK 733

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           DRLYT    S  RRS QTV+   L SI R++APILP  +ED+W+ +      E     E 
Sbjct: 734 DRLYTSFPESLERRSAQTVMYLILDSITRIMAPILPFTSEDIWKAMS-----EYKGKEEN 788

Query: 510 VFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA--KVYLF 567
           V  +  P + ++W+   + E   W KI+E+R EV +VLE AR  K+IG SL A  K+Y  
Sbjct: 789 VHLALLPAVSKQWKDTVIAE--NWKKIIEVRGEVTRVLEEARAKKIIGHSLNASVKIYAQ 846

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDK 626
            D   L SR          AD L+ IFI S V ++    P+G  ++    G Y       
Sbjct: 847 GDLFDLLSRY---------ADDLKTIFITSNVFLIKDEKPDGATKSREIEGLY------- 890

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             I    A G KCERCW Y   VG+    P +CSRC +VL
Sbjct: 891 --ISAEPAPGEKCERCWIYDMTVGTGTNEPGICSRCQKVL 928



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 188/336 (55%), Gaps = 42/336 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV A+W+NPYLT+  EYEA       +  L+G ++R KKP+HW  S +TALAEAE+
Sbjct: 140 FKRLGVLAEWDNPYLTMAYEYEAIIARECIKFGLEGSLFRSKKPIHWCCSCKTALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVAV 118
           EY E   S S++  F +       S  +++ +P+L      + +WTTTPWT+PAN AVA+
Sbjct: 200 EY-EDEKSPSVFVKFLL-------SDDVSKEIPELSGKKTYVVIWTTTPWTIPANLAVAL 251

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KL 177
           +   +Y  +E                   GN      +VFII ASDL       +     
Sbjct: 252 HPDFKYVAIET------------------GN-----NEVFII-ASDLAEKCMKIFSIPDY 287

Query: 178 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
            I   +    LE    +HP+ NR+  ++I G ++T ++GTG VHTAPGHG+EDY   L Y
Sbjct: 288 SILCEITAKQLEKKHCLHPLYNRE-SLIILGTHVTLDAGTGCVHTAPGHGREDYEVGLSY 346

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           GL   SPVDD G FT++   F G  V    N  +V  L +  SL+ EE   H YP+ WR 
Sbjct: 347 GLDTYSPVDDNGCFTDDVEFFKGKFVF-KANSDIVSKLKDSGSLVAEENISHSYPHCWRC 405

Query: 298 KKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           KKP IFRAT QWF S++  G R+ +++ I +VKWVP
Sbjct: 406 KKPVIFRATPQWFISMDKTGLRKKSLEEIDRVKWVP 441


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus marinus MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus marinus MC-1]
          Length = 954

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 191/340 (56%), Gaps = 36/340 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW+NPYLT+D  +EA  +   G+    G +Y+G KPV+W     TALAEAE+
Sbjct: 143 FQRLGVSGDWHNPYLTMDYRFEADIVRELGRFLHNGGLYKGAKPVYWCTHDVTALAEAEV 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVAV 118
           EY + H S +IY  F     P +    L +  P+L      + +WTTTPWT+PAN AV +
Sbjct: 203 EY-QDHESTTIYVKF-----PLAAEASLADLHPELAGKSCSVVIWTTTPWTIPANLAVCL 256

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA-----KW 173
           N  L Y +VEI +  +  + A                   ++  +   PTL+A     + 
Sbjct: 257 NGDLSYVMVEILNPADNHNLAVGEH--------------LLLAEALWEPTLQAAGLNPER 302

Query: 174 GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
             ++V++  L+G+DLEN R+ HP   +  P+++G D++TTE+GTG VHTAPGHG EDY  
Sbjct: 303 DARVVVR--LSGADLENRRFRHPFLEQDAPILLG-DHVTTEAGTGCVHTAPGHGAEDYEV 359

Query: 234 SLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           SLKYG+   +PVDD GKF E    F+G + +   N  VV  LDE+ +L+      H YP+
Sbjct: 360 SLKYGIQPYNPVDDYGKFVEGTPFFAG-EHIKKANPQVVTLLDERGALLASSKINHSYPH 418

Query: 294 DWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            WR   P I RAT QWF S+E    R+ A+ AI    W+P
Sbjct: 419 CWRCSTPLITRATPQWFISMEINDLRKKALQAIKDTSWIP 458



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 183/332 (55%), Gaps = 28/332 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD+LR+WVS+ DY GD+ I  ++L+ +SD YR++R T+RYL+ NL  +    +++ Y 
Sbjct: 638 YGADILRMWVSAEDYAGDIRISDEILKGLSDAYRRIRNTIRYLISNLSGFDAAEHTVPYG 697

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +D++AL ++  +++++ ++Y  Y F +++Q +  F  V++  FY D+ KDRLY   
Sbjct: 698 QLLELDRWALDRVARLIRDVEKAYTDYTFHRVYQSLHYFCGVEMGAFYLDIIKDRLYCDA 757

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RRS QTV+   L ++VR++AP++   AE+VW  +        G     V  + +P
Sbjct: 758 PDSVERRSAQTVMHHMLETLVRLMAPVMAFTAEEVWHYMA-------GEREASVHLAAFP 810

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
               +W    + +   W +  ++R EV K LE  R  K +GS +++ V L+  +  LA  
Sbjct: 811 KEHPEWYDDALAK--RWERYRQVRAEVYKSLEKDRVEKRVGSFMQSTVTLYCSE-ELAEF 867

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLP--STPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
           L +            R+FI+S+V++ P    P   + +   +G        KV  GVS +
Sbjct: 868 LSQFSAQN------SRLFIVSRVDIKPLAEAPAEAVVSEEITGL-------KVLTGVSGS 914

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +  KC RCWN+   VG+  +HP LC RC EV+
Sbjct: 915 D--KCVRCWNFDPGVGAHDDHPELCPRCREVV 944


>gi|310790083|gb|EFQ25616.1| isoleucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 947

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 194/339 (57%), Gaps = 38/339 (11%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ YGV  DW+  + T+DP++E  Q+ +F QM  +G IYR  KPV+WSPSSRTALAE
Sbjct: 134 MDGFRSYGVMGDWDARWTTMDPDFEIRQLRLFQQMVRRGLIYRKSKPVYWSPSSRTALAE 193

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E HVS + Y  +  ++  PS SG+  +    L   +WTTTPWT+PAN A+AV+ 
Sbjct: 194 AELEYNENHVSTAAYVRY-PITGGPSLSGVSGQ----LYAIIWTTTPWTLPANKAIAVHE 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L YAVV                 ++  + L    ++  + A  L P  E +     V+ 
Sbjct: 249 DLDYAVV----------------SAKGASYLTAVSRLEAVKA--LFPEEEPQ-----VVV 285

Query: 181 KTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            ++ GS+L+  +Y + +   Q     VI  D+++ +SGTGLVH APGHG EDY    + G
Sbjct: 286 SSIKGSELKGLKYHNRLQGVQSAPQPVIHADFVSADSGTGLVHIAPGHGFEDYEACAQLG 345

Query: 239 LPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           +   +P+DDEG FT EA             +L  G+ AV+  +  Q  ++    Y+HKYP
Sbjct: 346 IDAFAPIDDEGNFTREAFPDAPEKLTEASSILKGGSKAVLALI--QDDVLSAAKYKHKYP 403

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTK+P + R+T QWFA V+  +  A+DA+  VK+VP
Sbjct: 404 YDWRTKQPVVMRSTAQWFADVDSIKDDAVDALKDVKFVP 442



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 31/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S +YT DV +G  VL+ +  I  K R  ++ L G++H+     S      
Sbjct: 645 GPDALRLWVASSEYTKDVAVGQAVLKSVHTILVKYRTIIKMLTGSMHE-----SARTAPT 699

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D  AL QL+++ + + +++ +++F+K F  + R++  DLS FY +  KDRLY G   
Sbjct: 700 TALDHIALMQLKDVTEEVHQAFAAHEFYKAFNALNRWVANDLSAFYLEAMKDRLYCGDGG 759

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
                    VL    L  +R+++P+ P L E+ W + P     +             P+ 
Sbjct: 760 G--------VLEPIFLGFLRMLSPMTPLLVEEAWDHRPEFMKADRALLHPLHTPHDAPIH 811

Query: 519 DEKWRTFPVGEIYFWGK---ILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           D       VGE         ++ +   V   LE  R  K++GSSL++ V + T+D ++A 
Sbjct: 812 DRP--PSAVGEESLRKDLPVLISVSGAVKAALEKGRLAKVLGSSLQSSVVVTTEDPAVAG 869

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L      K+  + L+ +F++S VE     P G      Y   + V+G  K  + V   +
Sbjct: 870 VL-----GKYGEEELEAMFVVSSVETNVEVPPGAAWR--YDEAFEVDGA-KGTVSVLPPK 921

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             KC RCW Y       ++   LC RC +V+
Sbjct: 922 EHKCPRCWRYVA-----LKEDALCRRCEDVV 947


>gi|354807879|ref|ZP_09041331.1| isoleucyl-tRNA synthetase [Lactobacillus curvatus CRL 705]
 gi|354513629|gb|EHE85624.1| isoleucyl-tRNA synthetase [Lactobacillus curvatus CRL 705]
          Length = 928

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL  ++EA +I VFG+M+ +GYIY+GKKPV+WSPSS + LAEAE+
Sbjct: 139 FKRLGISADWDNPYITLTADFEAEEIRVFGEMAKKGYIYKGKKPVYWSPSSESTLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S+Y  F +V        LL+    D    +WTTTPWT+PAN  +AVN    
Sbjct: 199 EYKDIK-SPSMYVAFNVVDG----KDLLD---ADTKFIIWTTTPWTIPANLGIAVNPAFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y                         VL D +K +++ A  L    +      + I KT 
Sbjct: 251 YV-----------------------QVLADGQK-YVVAAERLNKMTDLLGWESVEILKTF 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+D+E     HP+ +R+  +VI G+++T E+GTGLVHTAPGHG++DY    KY LP+LS
Sbjct: 287 KGADMELMTARHPLYDRES-LVILGNHVTLETGTGLVHTAPGHGEDDYNAGTKYKLPVLS 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
            VD +G  TE+A  F G+      N  V + L++  SL+  + + H YP+DWRTKKP IF
Sbjct: 346 VVDSKGIMTEDAPGFEGV-YYDKANPMVTEALEKNGSLLKLDFFTHSYPHDWRTKKPVIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +  I +V+++P
Sbjct: 405 RATAQWFASIDAFRDQILAQIEKVEFMP 432



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 181/328 (55%), Gaps = 33/328 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVD + DV +  +  +Q+S+ YRK+R T+R+++ N  D+    +++ Y +
Sbjct: 612 GADIVRLWVASVDASSDVKVTMENFQQVSEAYRKIRNTMRFMIANTTDFDPAKDTVDYAE 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++ L +L  I+ + + +Y++Y F  +++ I  F+  +LS FY D AKD +Y  G 
Sbjct: 672 LGSVDKFMLVRLNAIIASCKAAYDAYDFATVYKTINMFLTNELSAFYLDFAKDVVYIDGQ 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               RR+ QTV  A  +++ +++ PILPH AE++W  L            EFV  ++ P 
Sbjct: 732 NDAPRRNIQTVFYAVAVALTKLLTPILPHTAEEIWSYL--------HEPEEFVQLAEMPE 783

Query: 518 LDEKWRTFPVGE---IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
           ++        GE   +  W   + +R +V K LE AR  K+IG SLEA V L+ ++A+ A
Sbjct: 784 VEHF-----AGEEDLVETWNAFMGIRDDVLKALETARMDKVIGKSLEAAVTLYPNEANAA 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
                   A  DAD ++++ I+SQ+ +   +      ++P          D + + V+ A
Sbjct: 839 ------LLASLDAD-VKQLLIVSQLTIADQSA-----DVPTEATQF----DGISVSVAHA 882

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           EG  C+RC    T +GS  + P LC+RC
Sbjct: 883 EGDVCDRCRMIKTDIGSDDKFPMLCARC 910


>gi|339640544|ref|ZP_08661988.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 056 str.
           F0418]
 gi|339453813|gb|EGP66428.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 056 str.
           F0418]
          Length = 930

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 195/329 (59%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  +S S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LLSTSLYYANRVKDG----KGVLD---TDTYITVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +K +             +VAS+L+ +L  K+G T + +  T
Sbjct: 251 YVVVQ-----------PAGEKRK------------FVVASELLNSLSEKFGWTDVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G++L +    HP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 HRGAELNHIVTAHPWDTTVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     VV  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFEGQFYDKVVPTVIEKLGNLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 176/340 (51%), Gaps = 34/340 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+LL N  D+   
Sbjct: 606 PSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLLANTSDFNPA 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++YD+L  +D+Y   +   +VK IR++Y  ++F  I++ +  FI VDLS FY D AK
Sbjct: 666 EDTVAYDELRSVDKYMTIRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y  G  S  RR  QTV    L+ I +++ PILPH AE++W  L F        A +F
Sbjct: 726 DVVYIEGAKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYLEF-------EAEDF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TF   +  +  W   ++ R +  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFLNQQEILDTWSAFMDFRGQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLP-STPNGLIRNIPYSGEYLVEGKDK 626
            ++  +   L E   +      + ++ I+S++ +   S P+  +              + 
Sbjct: 835 PNE--VVKTLLEAVNSD-----VAQLLIVSKLTIAEGSAPDTAV------------SFED 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V   V RA G  C+RC            H  +C  C E+L
Sbjct: 876 VAFTVERASGEVCDRCRRIDPTTAERSYHALICDHCAEIL 915


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 185/334 (55%), Gaps = 35/334 (10%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FK  GV  D+ NPYLTL PE+EA QIE+FG+M+ + +IY+G KPV+W P   TALAEA
Sbjct: 140 AQFKSLGVLGDYENPYLTLRPEFEARQIEIFGEMAKRDFIYKGLKPVYWCPECDTALAEA 199

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAVWTTTPWTVPANAAVAV 118
           E+EY E     SIY  F    A     G   +   D   +   +WTTT WT+P N A+ +
Sbjct: 200 EIEYAEDPC-YSIYVKF----AVTDDKGFFEKQGIDKNKVFFVIWTTTTWTLPGNLAICL 254

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
                Y +V                        K+ ++ +++    + P +EA       
Sbjct: 255 GPNYDYTLV------------------------KNGEEYYVMARELVAPAMEAAKIEGYE 290

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY- 237
           +  + AGS+ E  +  HP  +R+  +VI GD++T ESGTG VHTAPGHG ED+     Y 
Sbjct: 291 MVGSFAGSEFEYMKCAHPFLDRE-SLVIVGDHVTLESGTGCVHTAPGHGVEDFEVCKHYP 349

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
            +PI+ PVD  G  T+EAG+F GL    D N A+ K L+E  +L   +   H+YP+ WR 
Sbjct: 350 EIPIVVPVDSNGVLTKEAGEFQGLKT-DDANKAIAKKLEETGNLFAIQKIIHQYPHCWRC 408

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           K P I+RATEQWF S++ F++ A+ AI  V W+P
Sbjct: 409 KSPIIYRATEQWFCSIDDFKEDAVKAITDVNWIP 442



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 191/368 (51%), Gaps = 38/368 (10%)

Query: 305 ATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLR 364
            T  W    EG +   M    Q    P +    YG D+LRLWV+S DY  DV I P++L+
Sbjct: 592 CTHGWVVDGEGRK---MSKSMQNGVAPEKIISQYGTDILRLWVASSDYHADVRISPEILK 648

Query: 365 QMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESY 423
           Q+S+ YRK+R T R++LGN+ D+    + +    L  ID++AL +L+ ++K + E+Y ++
Sbjct: 649 QLSEAYRKIRNTARFILGNISDFDPNTDKVDNSSLHEIDKWALVKLDALIKKVNEAYNAF 708

Query: 424 QFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPI 483
            F  I+  I  F +VD+SNFY D+ KDRLY G      RR+ QT +   L S+ R+IAPI
Sbjct: 709 DFHIIYHAIHNFCVVDMSNFYLDIIKDRLYCGNMED--RRAAQTAMYVILDSLTRLIAPI 766

Query: 484 LPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF--WGKILELRT 541
           L   +E++W  LP       G   E V  +  P          V E +   W KI  +R 
Sbjct: 767 LAFTSEEIWSFLPHT----KGDNTESVLLNSMPTE----TGIQVDEAFTEKWNKIYAVRE 818

Query: 542 EVNKVLEVARTGKLIGSSLEAKVYLFT--DDASLASRLREMCTAKHDADTLQRIFIISQV 599
              K LE  R  K IG SLEA + L    +DA   + L E         TL+ +FI+S V
Sbjct: 819 CAKKALETKRAAKEIGGSLEANIVLHCSEEDAEFFTNLTE---------TLEAVFIVSDV 869

Query: 600 EVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLC 659
            V          ++   GE+    +  + I V +A G KCERCW YS  VG   EHPTLC
Sbjct: 870 SV----------SVGGKGEFDFP-EQGISIDVVKAAGEKCERCWIYSDTVGKNEEHPTLC 918

Query: 660 SRCYEVLA 667
           +RC EVLA
Sbjct: 919 ARCAEVLA 926


>gi|81428370|ref|YP_395370.1| isoleucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123728658|sp|Q38XM0.1|SYI_LACSS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|78610012|emb|CAI55060.1| Isoleucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 928

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL  ++EA +I VFG+M+ +GYIY+GKKPV+WSPSS + LAEAE+
Sbjct: 139 FKRLGISADWDNPYITLTADFEAEEIRVFGEMAKKGYIYKGKKPVYWSPSSESTLAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S+Y  F +V        LL+    D    +WTTTPWT+PAN  +AVN    
Sbjct: 199 EYKDIK-SPSMYVAFNVVDG----KDLLD---ADTKFIIWTTTPWTIPANLGIAVNPAFD 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y                         VL D +K +++ A  L    +      + I KT 
Sbjct: 251 YV-----------------------QVLADGQK-YVVAAERLNKMTDLLGWESVEILKTF 286

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+D+E     HP+ +R+  +VI G+++T E+GTGLVHTAPGHG++DY    KY LP+LS
Sbjct: 287 KGADMELMTARHPLYDRES-LVILGNHVTLETGTGLVHTAPGHGEDDYNAGTKYKLPVLS 345

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
            VD +G  TE+A  F G+      N  V + L++  SL+  + + H YP+DWRTKKP IF
Sbjct: 346 VVDSKGIMTEDAPGFEGV-YYDKANPMVTEALEKNGSLLKLDFFTHSYPHDWRTKKPVIF 404

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +  I +V+++P
Sbjct: 405 RATAQWFASIDAFRDQILAQIEKVEFMP 432



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 176/333 (52%), Gaps = 35/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GAD++RLWV+SVD + DV +  +  +Q+S+ YRK+R T+R+++ N  D+    +++ Y +
Sbjct: 612 GADIVRLWVASVDASSDVKVTMENFQQVSEAYRKIRNTMRFMIANTTDFDPAKDTVDYAE 671

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++ L +L  I+++ + +Y++Y F  +++ I  F+  +LS FY D AKD +Y  G 
Sbjct: 672 LGSVDKFMLVRLNAIIESCKAAYDAYDFATVYKTINMFLTNELSAFYLDFAKDVVYIDGQ 731

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDGSAAEFVFES 513
               RR+ QTV  A  +++ +++ PILPH AE++W  L     F    E    A F  E 
Sbjct: 732 NDAPRRNMQTVFYAVAVALTKLLTPILPHTAEEIWSYLHEPEEFVQLAEMPEVAHFAGEE 791

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
                           +  W   + +R +V K LE AR  K+IG SLEA V L+ ++A+ 
Sbjct: 792 DL--------------VATWNAFMGIRDDVLKALETARMDKVIGKSLEAAVTLYPNEANA 837

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
           A        A  DAD ++++ I+SQ+ +             + G         V + V+ 
Sbjct: 838 A------LLASLDAD-VKQLLIVSQLTIADQAVEAPAEATQFDG---------VAVSVAH 881

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  C+RC    T VGS  + P LC+RC  ++
Sbjct: 882 AEGDVCDRCRMIKTDVGSDDKFPMLCARCAAIV 914


>gi|403169532|ref|XP_003328980.2| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375168305|gb|EFP84561.2| isoleucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1020

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/348 (38%), Positives = 195/348 (56%), Gaps = 39/348 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R  +  DW   + TLD +YE  Q+++F QM+    I R +KPVH+SPSS TALAEAE+
Sbjct: 172 FDRLSILTDWGKAWRTLDHDYEIKQLDLFAQMAKNRLISRHRKPVHFSPSSGTALAEAEI 231

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY + H+SRS+Y  F +++  P+   + + F+    L  AVWTTTPWT+ AN AVA++  
Sbjct: 232 EYRDDHLSRSVYVAFDILNPSPALQAITDRFVFNAKLKAAVWTTTPWTLIANQAVAISKS 291

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE---AKWGTKLV 178
            +Y++V++ S   GD +                    +I A+D +P L+   A   +++ 
Sbjct: 292 ARYSLVKLSS---GDLSNAE----------------VLIFATDRLPALKNLIADESSEME 332

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY- 237
           +   L+G +LE   Y H  ++   P+    +++T ESG+GLVHTAP HG ED+     + 
Sbjct: 333 VVGELSGEELELSTYRHDFNSSDLPIFC-ANHVTVESGSGLVHTAPSHGLEDFYAYTNFM 391

Query: 238 -------GLPILSPVDDEGKFT-----EEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 285
                   L ++  VDD+GKF      E + +  G   L DGN  V+  L+EQ  LI +E
Sbjct: 392 KTQRPSESLSLIEVVDDQGKFNCQDPIEWSRRLHGKAALADGNNEVICMLEEQKRLIGKE 451

Query: 286 -PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 332
               HKYPYDWRTKKP + + T QWF  +E  RQAA+  I +V + PP
Sbjct: 452 VKIRHKYPYDWRTKKPILTKITSQWFVELENIRQAALSMIKRVDFHPP 499



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 24/349 (6%)

Query: 333  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH-DWRVGN 391
            ++ PG+G DVLR W +SVD+T DV IG   L ++SD+ RK+R T R+LLGN++ D  V +
Sbjct: 674  KKQPGFGIDVLRFWTASVDFTRDVTIGVDQLSRLSDVVRKIRSTARFLLGNVYRDDDVKS 733

Query: 392  S---ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
            S   +S  D  +I++Y L  L    ++++ +Y    F ++ Q+I  F    LS FYF+  
Sbjct: 734  SEVGLSRGDFGLIEEYMLHLLYEFQQSVQRAYNELDFKQVVQLITNFTTKTLSAFYFETV 793

Query: 449  KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
            KD LY+       R+    ++S  L      IAPILPHLAE++  +   ++     S + 
Sbjct: 794  KDILYSNAQGDPERQRVLNLMSKVLEIYKLAIAPILPHLAEEIAIH-QTSFGRSSSSPSA 852

Query: 509  FVFESKWPVLDEKWRTFPV-GEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
             VFE  WP L E W+   +  ++ F   ++ +R  + +  EV R  K + S  E ++ + 
Sbjct: 853  SVFEQCWPSLCEDWKDSKILKDMEF---LISIRDSIMREAEVLRQAKKLRSLEEVELVID 909

Query: 568  TDDASLASRLREM-CTAKHDADTLQRIFIISQVEVL-PSTPNGLIRNI-------PYSGE 618
              D     R   +    KHD+  L R+F +S   V   +     + NI       P+   
Sbjct: 910  ISDPIGKGRAEIVESLVKHDS-LLPRLFGLSDASVCRTANVTNTVLNIAAPAWQHPFEFR 968

Query: 619  YLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +       + + +  A  +KC RCW ++ + G  V     C+RC EVL 
Sbjct: 969  FGDRQDLIIKLFIVPAWRTKCSRCWKFTVEEGCPV-----CARCAEVLT 1012


>gi|405983211|ref|ZP_11041521.1| isoleucine-tRNA ligase [Slackia piriformis YIT 12062]
 gi|404389219|gb|EJZ84296.1| isoleucine-tRNA ligase [Slackia piriformis YIT 12062]
          Length = 948

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 193/339 (56%), Gaps = 40/339 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW +PYLT  P +E+A +EVF QM L G +YRG+KP+HW     TALAEAE+
Sbjct: 143 FKRLGVNGDWEHPYLTFQPSFESANVEVFKQMYLDGAVYRGRKPIHWCKHCHTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAP-PSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY +  +S SIY  F++   P P  +  ++    +  + +WTTTPWT+PAN AV+   ++
Sbjct: 203 EYAD-EMSPSIYVNFKLNEVPEPFVAAGVD--ADNAYVLIWTTTPWTLPANTAVSFGPEI 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE--AKWGTKLVIK 180
           +Y  VE            A+ K             F++ A ++V  +   A W    V++
Sbjct: 260 KYCFVE------------ADGK-------------FMLFAHEMVEQVAEVAGWENYRVVE 294

Query: 181 KT-----LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
                  + G       YV PV       +I GD++T ++GTG VHTAPGHG +DY+   
Sbjct: 295 ADGEPVLMNGDQFGGVTYVCPVIQDNVGRIIWGDHVTLDAGTGAVHTAPGHGVDDYLVGQ 354

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           ++G+  + PVDD+G+FT+    F+GLD   + N  ++++L EQ +L+      H YP+ W
Sbjct: 355 EFGIETIMPVDDDGRFTDYVPLFAGLDT-DEANPKIIEWLKEQGTLVAHVDINHSYPHCW 413

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
           R  +P IFRAT+QWF S+E  G R+AA+D I   V+W+P
Sbjct: 414 RCHQPVIFRATDQWFVSMEKTGLREAALDQIRNHVQWIP 452



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 178/343 (51%), Gaps = 34/343 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWR 388
           P +    YGADVLRLWV+S DY+ DV IG  +L++ SD YR+ R T R+LLGNL   DW 
Sbjct: 628 PREVTDKYGADVLRLWVASTDYSVDVSIGDTILQRTSDAYRRFRNTFRFLLGNLDGFDWE 687

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + + + DL  ID +A+ +L  ++  +   Y+ Y+F  +F+ +  ++I DLS  Y DV 
Sbjct: 688 -RDCVDFADLKPIDVWAMLRLREVLHEVERGYDEYKFHSVFRALYDYVITDLSAVYMDVI 746

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S +RR+ QTVL   L  +VRV++PIL    ++VW++ P A    +G    
Sbjct: 747 KDRLYAEAPNSVSRRAAQTVLMNILEVMVRVMSPILSFTCDEVWEHYPEAERNREGRPVN 806

Query: 509 FVFESKWPVLDEKWRTFPVGE-----IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAK 563
               + WP   +     P GE     +  +  +L  R  V K LE ART K +  S EA 
Sbjct: 807 VQL-AGWPTDADFAPALPEGEEAQAFMDRFDSLLAARDAVTKALEDARTAKTVNKSQEAA 865

Query: 564 VYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG 623
           + +   +A+          +  DA  L+ +FI++ V V  +                 EG
Sbjct: 866 LTIAAPEAAFE------VLSSADAADLEELFIVASVAVERA-----------------EG 902

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           +D V + V +    KC RCWNY  ++G    HP +C+RC EVL
Sbjct: 903 EDIV-VTVEKTSADKCPRCWNYR-ELGGNAAHPDVCARCGEVL 943


>gi|85859341|ref|YP_461543.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722432|gb|ABC77375.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 933

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/394 (36%), Positives = 210/394 (53%), Gaps = 55/394 (13%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ +W NPYLT+  +YEA  +E FG++ L G +Y+GKKPV+W  S +TALAEAE+
Sbjct: 140 FKRLGVFGEWENPYLTMHYDYEATTVEEFGKLYLGGAVYKGKKPVYWCASCKTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVS----APPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           EY + H + SIY  F M+S      P  SG        + + +WTTTPWT+PAN A+A++
Sbjct: 200 EYAD-HTTPSIYVKFAMISDISAVRPKLSG------QKVSIVIWTTTPWTIPANLAIALH 252

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK--- 176
            +  Y  V     +                         +I+A D++      +G +   
Sbjct: 253 EEFIYVAVRFDEEV-------------------------LILAKDMLDYCIDAFGYQNKP 287

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             I     G+ LE  +  HP+ +R+  VVI   ++T ++GTG VH APGHGQEDY   +K
Sbjct: 288 YEILDEFPGAVLEGLKARHPLIDRE-SVVILAPFVTLDAGTGCVHIAPGHGQEDYEIGMK 346

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           YGL   +PVD +G+FT +   F+G + + D N +V + L E  +L+     EH YP+ WR
Sbjct: 347 YGLDNYAPVDADGRFTPDVADFAG-EFVFDANDSVNRKLKEVGALLGLVNIEHSYPHCWR 405

Query: 297 TKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP----------QEAPGYGADVLR 344
            K P IFR+TEQWF S+E    R+ A++A+  V+W+P           +  P +     R
Sbjct: 406 CKNPIIFRSTEQWFISMEKNELRKKALEAVESVRWIPAWGKDRIYGMIENRPDWCISRQR 465

Query: 345 LWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLR 378
           LW   +        G QV+ +  +I + L G +R
Sbjct: 466 LWGVPITMFYCESCGAQVMNE--EILKHLVGLVR 497



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 200/331 (60%), Gaps = 21/331 (6%)

Query: 337 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSISY 395
            YGA++LRLWV+S DYT D+ I  ++L+++ + YR++R T R++LGNL+D+ V  +S++Y
Sbjct: 621 AYGAEILRLWVASEDYTVDLRISDEILKRLVEAYRRIRNTSRFILGNLYDFNVESDSVAY 680

Query: 396 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 455
            DL  +D++ L +L+ +++ +R SY+++QF  +F  +  F  VDLS  Y DV KDRLYT 
Sbjct: 681 ADLEPMDRWMLHRLQELIRKVRTSYDNFQFHAVFSALYNFCTVDLSALYLDVLKDRLYTS 740

Query: 456 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 515
              S  RRS QTV+      + R++APIL   AE++W  LP AY   +G AA  V  +++
Sbjct: 741 RADSRERRSAQTVMFQIANDMTRLLAPILTFTAEEIWTALP-AY---EGKAAS-VHLAQF 795

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           P ++E      +GE   W  ++ L++E+++V+E AR  K+IG SL+A V L   +  L++
Sbjct: 796 PEVEETCIDNELGET--WTTMIALKSEISRVIENARKNKVIGHSLDACVELAPPE-KLSA 852

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L E        + L+ + I+SQ+ + P+    +    P  G    EG   + +GVSRA 
Sbjct: 853 FLEE------HLEELRTLLIVSQIRIAPAA--DIAEPYPCPGADF-EG---LHVGVSRAR 900

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G KC RCW YS  VG   E+P +C RC + L
Sbjct: 901 GQKCNRCWMYSELVGVDTEYPEVCERCLKNL 931


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 189/332 (56%), Gaps = 26/332 (7%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ DW NPY+T+D  YEA  ++   +    G  Y+G KPV+W  S  TALAEAE+
Sbjct: 140 FKRLGVFGDWENPYITMDFAYEANTLKELYKFFNNGGAYKGLKPVYWCISCVTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F +        G+  E        +WTTTPWT+PAN  +A+N + +
Sbjct: 200 EYHD-HTSPSIYVKFPLQDDAKKALGIETE---KAFAVIWTTTPWTIPANLGIALNPEFE 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL-EAKWGTKLVIKKT 182
           YA++++             KKS   N+  D     +++A +LV  L E     +  I KT
Sbjct: 256 YALLKV-------------KKSNNKNIDNDD---ILVLAKELVERLVEIFEIEEYDIIKT 299

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
                +EN    HP  +R    V+G +++T E GTGLVHTAPGHGQEDY   LKYGL IL
Sbjct: 300 FNPEIIENKNAKHPFYDRNSLFVLG-NHVTLEQGTGLVHTAPGHGQEDYEVGLKYGLEIL 358

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G F ++   F+G ++    N  ++  +DE  +LI ++  EH YP+ WR K P +
Sbjct: 359 NPVDDYGNFKKDTELFAGQNIFK-ANQDIINLMDENKTLIRQDKVEHSYPHCWRCKNPVV 417

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQ-VKWVP 331
           FRAT QWF S+E    R+ A++ I + V W+P
Sbjct: 418 FRATPQWFISMEKNDLRKKALEEIDKNVTWIP 449



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 182/337 (54%), Gaps = 32/337 (9%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
            P +    YGA++LRLWV++ DYT DV I   +++++ + YRK+R T+RYLLGNL+D+  
Sbjct: 620 TPDEIIDKYGAEILRLWVAAEDYTEDVRISNDIIKRLVESYRKIRNTMRYLLGNLYDFNP 679

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             NSI ++ L  +D+Y L + + + K I ++YE+YQF   +  +  F I DLS FY D+ 
Sbjct: 680 DENSIPFEKLKELDKYILMRWQEVKKRIYKAYENYQFHIFYHTLINFCINDLSAFYLDII 739

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDR+Y     SF RRS Q+ +      +  V+ PIL   A++VW+ LP      DG   E
Sbjct: 740 KDRVYAYKNDSFERRSAQSTMFTLAKEMAIVMNPILSFTADEVWEFLPNF----DGK-QE 794

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            VF   +P L        + ++     +  L+ E+NK  E+AR  K+IG SL+AKV +  
Sbjct: 795 SVFIHTFPELLNIDDNSLIKKM---EALTNLKAEINKACEIARRNKIIGHSLDAKVIV-- 849

Query: 569 DDASLASRLREMCTAKHDADT-LQRIFIISQ--VEVLPSTPNGLIRNIPYSGEYLVEGKD 625
                   ++ +     D D  +++IFI+S+  +E      N       Y+ E   +G  
Sbjct: 850 -------GIKNVDKDVLDVDEGIEKIFIVSEFVLEDFDKMSNC------YTSE---DGSI 893

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           KV +  S     KCERCW ++  VG   +HPT+C RC
Sbjct: 894 KVQVEASAL--PKCERCWTHAESVGKIDKHPTICERC 928


>gi|358387593|gb|EHK25187.1| hypothetical protein TRIVIDRAFT_84998 [Trichoderma virens Gv29-8]
          Length = 949

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 193/339 (56%), Gaps = 36/339 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ + V ++W+N + T+D  +E  Q+ VF +M   G IYR  KPV+WS SSRTALAE
Sbjct: 135 MKGFQSFAVMSEWDNKWTTMDRAFEIRQLRVFQKMVRSGLIYRKHKPVYWSTSSRTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS + Y  F ++S   S  G L+EF   L  A+WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYRDDHVSTAAYVRFPIMSDWSSIPG-LSEFKGQLYAAIWTTTPWTLPANKAIAVHN 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
           +L Y ++++     G+                      I+VA   V  ++    +  VI 
Sbjct: 254 ELDYVLLQV-----GNDG--------------------ILVAESRVEEIQKNIPSAAVIA 288

Query: 181 KTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           K++ GS L    Y + +      +  ++  ++++ +SGTGLVH APGHGQEDY      G
Sbjct: 289 KSIPGSQLTGLLYRNKLRGSASSLQPIVHAEFVSADSGTGLVHMAPGHGQEDYQACSALG 348

Query: 239 LPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYP 292
           +   +P+ DEG FT EA         SG  +L  G+ AV++ + +   ++     +HKYP
Sbjct: 349 IEAFAPITDEGHFTPEAYPDDPEKLTSGPSILDGGSQAVLELVGQD--VLWTHKLQHKYP 406

Query: 293 YDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YDWRTKKP + RAT QWFA V   ++ A+ A+GQV++VP
Sbjct: 407 YDWRTKKPVVIRATAQWFADVGSIKEDALQALGQVRFVP 445



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 178/359 (49%), Gaps = 44/359 (12%)

Query: 324 IGQVKWVPPQEAPG---------YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLR 374
           I + K +PP ++ G          G D LRLW +S D+T D+++G  +L+ +     K R
Sbjct: 618 IMEGKLLPPLKSKGNDAATRFDALGTDALRLWAASSDFTSDILVGASILQPIHSALIKYR 677

Query: 375 GTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQR 434
            TL+ LLG+LH      S     L  +DQ A+ QL++++  + E+Y +Y+F K   +I R
Sbjct: 678 TTLKMLLGSLH-----QSALEAPLTKLDQIAILQLQDVMAQVWEAYSNYEFHKAAGLINR 732

Query: 435 FIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 494
           +I  DLS FY +  KDRLY G            VL   L+  +R++API P L E+ W +
Sbjct: 733 WIATDLSAFYLEGLKDRLYCGDGGD--------VLVPILVGFLRMLAPITPMLVEEAWSH 784

Query: 495 LPFAYTLEDGS---AAEFVFESKWPVLDEKWRTFPVGEIYFWGKILE-LRTEVNKVLEVA 550
            P ++ +ED S    A  ++ S   V+D    T    ++     IL  +   V   LE  
Sbjct: 785 RP-SWMVEDASFEHPARQLYNSH--VIDPARLTLDQAQLRLHLPILSAVHDAVKAGLEQG 841

Query: 551 RTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV-LPSTPNGL 609
           R  K +GSSL+  + +   D  LA+ L+E        D L  +F++S VE+  P +P+  
Sbjct: 842 RESKALGSSLQCSLNISVTDDRLAAVLKEYL------DELDAMFVVSSVELNSPLSPDN- 894

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
             +  YS E+ V+G   V + V   + SKC RCW Y  +     E   LC RC +V A 
Sbjct: 895 -HDWCYSKEFTVDGMQGV-VHVLPPKQSKCSRCWRYVAE-----EEDGLCGRCEDVTAA 946


>gi|15487790|gb|AAL00939.1|AF401660_1 isoleucyl-tRNA synthetase [Lactobacillus sakei]
          Length = 569

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 196/328 (59%), Gaps = 34/328 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR G+ ADW+NPY+TL  ++EA +I VFG+M+ +GYIY+GKKPV+WSPSS + LAEAE+
Sbjct: 41  FKRLGISADWDNPYITLTADFEAEEIRVFGEMAKKGYIYKGKKPVYWSPSSESTLAEAEI 100

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S S+Y  F +V        LL+    D    +WTTTPWT+PAN  +AVN    
Sbjct: 101 EYKDIK-SPSMYVAFNVVDG----KDLLD---ADTKFIIWTTTPWTIPANLGIAVNPAFD 152

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y                         VL D +K +++ A  L    +      + I KT 
Sbjct: 153 YV-----------------------QVLADGQK-YVVAAERLNKMTDLLGWESVEILKTF 188

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+D+E     HP+ +R+  +VI G+++T E+GTGLVHTAPGHG++DY    KY LP+LS
Sbjct: 189 KGADMELMTARHPLYDRES-LVILGNHVTLETGTGLVHTAPGHGEDDYNAGTKYKLPVLS 247

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
            VD +G  TE+A  F G+      N  V + L++  SL+  + + H YP+DWRTKKP IF
Sbjct: 248 VVDSKGIMTEDAPGFEGV-YYDKANPMVTEALEKNGSLLKLDFFTHSYPHDWRTKKPVIF 306

Query: 304 RATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RAT QWFAS++ FR   +  I +V+++P
Sbjct: 307 RATAQWFASIDAFRDQILAQIEKVEFMP 334



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 37/49 (75%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW 387
           GAD++RLWV+SVD + DV +  +  +Q+S+ YRK+R T+R+++ N  D+
Sbjct: 514 GADIVRLWVASVDASSDVKVTMENFQQVSEAYRKIRNTMRFMIANTTDF 562


>gi|116182640|ref|XP_001221169.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
 gi|88186245|gb|EAQ93713.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
          Length = 947

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 192/338 (56%), Gaps = 33/338 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V ADW+  + T+D  YE  Q+ +F QM+ +G +YR  KPV+WSPSS TALAE
Sbjct: 135 MKSFRTYAVMADWDARWTTMDTAYEIRQLRLFRQMARRGLVYRKFKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY + HVS++ Y  F +V       G L  F   L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNDAHVSKAAYIRFPVVGGYEDLPG-LEGFGGRLFAVIWTTTPWTLPANRAIAVHE 253

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 180
            L Y +V++ +    D+   A       N L+   K+F               G    I 
Sbjct: 254 DLAYHIVKVGA----DAFLVAE------NCLERIAKLF-------------GEGAVFEIV 290

Query: 181 KTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
            T+ GS L   RY++ +  +       + G ++T  SG+GLVH APGHG +DY+  L  G
Sbjct: 291 GTVKGSQLTQLRYLNVLRGKSAEPQPFMHGSFVTDGSGSGLVHCAPGHGFDDYLACLSLG 350

Query: 239 LPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 293
           + + +PVD++G FTEEA      +  G+ VL  G+ AV+  L + +  +    Y+HKYPY
Sbjct: 351 ISVSAPVDNDGLFTEEAFPDHPHRLKGISVLDGGSDAVLNILGDDVLDVHN--YQHKYPY 408

Query: 294 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           DWRTKKP I RAT QWFA V   +  A+ A GQV++VP
Sbjct: 409 DWRTKKPIIIRATAQWFADVGTIKDDALGATGQVQFVP 446



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 153/319 (47%), Gaps = 35/319 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D LRLWV+S DYT D+++G  VL  +     K R T++ L G++H      S     L
Sbjct: 650 GPDALRLWVASSDYTRDIVLGEPVLTTIHQALLKYRITIKMLTGSMHP-----SACTAPL 704

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +DQ AL QL +++  +   Y++++F K F  + R++  DLS FY +  KDRLY     
Sbjct: 705 TTLDQIALLQLGDVMAEVGRHYDAHEFNKAFNALNRWLTNDLSAFYLEALKDRLYCADGG 764

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE-SKWPV 517
                    VL      ++R++API P L E+ W++ P  +  ED +    + +    P+
Sbjct: 765 G--------VLEPLFFGLLRMLAPITPVLVEEAWEHRP-QWLKEDETVVHPLHQLYDAPL 815

Query: 518 LDEKWRTFPVGEIYFWGKILELRTE--VNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
           +DE  RT   G +     +L +RT   +    E+AR  K++GSSL+  V L   +     
Sbjct: 816 VDEGRRTVAEGALREAVPVL-MRTHAAIKAASELARGDKVLGSSLQCDVVLEVPEGKALQ 874

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLI---RNIPYSGEYLVEGKD-KVWIGV 631
            L          + L+ +F++S VE+     NG +       Y  E+ +EGK  K W+  
Sbjct: 875 ALERF------REELEAMFVVSSVEL-----NGTVAEDAQWKYCEEFELEGKQCKAWVLP 923

Query: 632 SRAEGSKCERCWNYSTQVG 650
            +   +KC RCW      G
Sbjct: 924 PKQ--AKCPRCWRVCCAQG 940


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 190/333 (57%), Gaps = 35/333 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ DW++PYLT+ P YEAA          +G +YRGKKP+HW  S RTALAEAE+
Sbjct: 143 FKRLGVFGDWDDPYLTMRPSYEAATALALCDFVEKGSVYRGKKPIHWCLSCRTALAEAEV 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL-AVWTTTPWTVPANAAVAVNAKL 122
           EY +   S S++  F +    P    +     P     A+WTTTPWT+P N AVA + + 
Sbjct: 203 EYAD-ETSPSVFVRFPLPD--PKIKDVFPMADPARTYAAIWTTTPWTLPDNMAVAAHPEF 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKK 181
            YA+V       GDS                      ++A+ L+ ++   +G T   +  
Sbjct: 260 DYALVAA-----GDSQ--------------------YVLAAQLLESVRELFGWTDAKVLA 294

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T  GS LE  +  HP  +R+ P  +  DY+T ++GTGLVHTAPGHG+EDY T L+YGL +
Sbjct: 295 TAPGSALEGLKARHPFYDRESPFAL-ADYVTLDAGTGLVHTAPGHGREDYDTGLRYGLDV 353

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
           LSP+DD G+F +    F+GL V  + N  V++ L E  +L+ E    H YP+ WR K+P 
Sbjct: 354 LSPMDDAGRFLDVVPYFAGLTVW-EANPKVIEKLKEVGNLLAERKIRHSYPHCWRCKEPV 412

Query: 302 IFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 331
           IFRAT QWF S+E    R  A+ AI G+V+W+P
Sbjct: 413 IFRATTQWFISMEVGDLRNRALAAIDGEVEWIP 445



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 178/343 (51%), Gaps = 25/343 (7%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + PQE    +GA++LRLW S+VDY  D+ +  ++L ++ + YR++R T R++LGNL D+ 
Sbjct: 618 IEPQEIIDKHGAEILRLWTSAVDYRDDIRLSEEILSRLVEAYRRIRNTCRFVLGNLSDFD 677

Query: 389 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              N ++   +  +D YA+         I E+YE+Y+F K+F  +    + DLS FY D+
Sbjct: 678 PAVNDVAPQSMLPLDSYAVDTAARAHARIAEAYEAYEFHKVFHALHNLCVTDLSAFYLDI 737

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDRLY   T S  RRS Q  L   L  ++R +APIL   AE+V+++ P      +    
Sbjct: 738 LKDRLYVSATDSLERRSAQAALWRILRVLLRDMAPILSFTAEEVFRHTP------ECQRG 791

Query: 508 EFVFESKWPVLDEK-WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           + V     P LD   W   P  +      +  LR EV + +E  R    IG SLE  V L
Sbjct: 792 DGVSVFSLPPLDTAGWELAPERKEKL-DLVAALRGEVTRAIEPRRKAGEIGHSLETAVTL 850

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  +A     +RE   A  D + L+ +FI+SQ  + P+           +     EG + 
Sbjct: 851 YLPEA-----VRE-AVASLDMN-LREVFIVSQATLAPAADA-------PADAVACEGLEG 896

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQ 669
             +GV+RA G KC RCW Y  ++G+  E+P LC RC  V+A +
Sbjct: 897 ALVGVARAAGEKCARCWVYD-KLGTAPEYPDLCPRCAAVMAKE 938


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|335049616|ref|ZP_08542603.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|333762351|gb|EGL39849.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
          Length = 932

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 193/332 (58%), Gaps = 33/332 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R+GV  +W +PYLTL    E  QI VFG+M+  G+IY+GKK V+W P   TALAEAE+
Sbjct: 140 FIRFGVLGEWEHPYLTLQHHIEVEQIGVFGKMAKNGHIYKGKKTVYWCPHCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-VWTTTPWTVPANAAVAVNAKL 122
           EY E   S SI+  F+ V        +  +  PD   A +WTTTPWT+P N A++ NA  
Sbjct: 200 EYKEDK-SFSIFVKFKAVDV---NCHMPKDADPDKVFALIWTTTPWTIPCNLAISANADF 255

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
            Y  V++                    +L  Q++V  ++ +  + T E       ++ + 
Sbjct: 256 TYVWVKVAEEY----------------LLMAQERVDEVMKAADIDTYE-------ILPER 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG---L 239
           + G  LE   + HP   R+ P+++G D++T ++GTGLVHTAP HGQ+D+   +KY    +
Sbjct: 293 MQGKQLEGFIFQHPFYERKAPILLG-DHVTLDAGTGLVHTAPDHGQDDFEVCMKYSAWDI 351

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
             L  VD+ G++T++   + G+ V  D NV V+K L    +L  +  + H+YP+ WR K+
Sbjct: 352 KPLGTVDETGRYTDKVPGYEGVFVF-DNNVPVIKKLAAIDALFAKSTFRHQYPHCWRCKE 410

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P I+RATEQWF+SV+G+RQ A+ AI QV+W+P
Sbjct: 411 PIIYRATEQWFSSVDGYRQEALQAIDQVQWIP 442



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 203/358 (56%), Gaps = 28/358 (7%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           RK+R T RYLLG+L D+    +S+ Y+ L  +D++AL +LE + +++ ESYE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGSLADFDPAKDSVPYEALTELDKWALSRLEQVRESVTESYETYQFHVMY 714

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
             I  F  VDLS  Y DV KDRLYT    +  RRS QT +   L ++V+++AP+L   AE
Sbjct: 715 HTIHNFCTVDLSAMYLDVIKDRLYTERQDAPVRRSAQTTIYRILTTLVKIVAPVLSFTAE 774

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           +VWQ++P     E     E V  + WP    ++R   +     W + L  R+++ +VLE 
Sbjct: 775 EVWQHMP-----ETVDKEESVHLTDWPTAHPEYRNADLEA--RWQEFLSYRSDLMRVLEG 827

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST-PNG 608
           AR  K IG +L+A V ++ +  +       + T K   D L  + I+S+  V+  T P  
Sbjct: 828 ARQAKTIGHALDAAVTVYAEGETYDF----LATWK---DRLATLLIVSEATVVKGTAPEN 880

Query: 609 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            +           E  + + I V+ +   KCERCW +S  VG    HPTLC+RC  VL
Sbjct: 881 AVPG---------EEHEDMKIVVTASTHVKCERCWIHSESVGKDERHPTLCARCAAVL 929


>gi|404494112|ref|YP_006718218.1| isoleucyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3.1|SYI_PELCD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|77546132|gb|ABA89694.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 211/372 (56%), Gaps = 29/372 (7%)

Query: 297 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGD 355
           T++ T +++       V+G  +    ++G V  V P+E    YGA++LRLWV++ DY  D
Sbjct: 580 TRELTPYKSVLTHGFVVDGKGKKMSKSVGNV--VAPEEVIKKYGAEILRLWVAAQDYRDD 637

Query: 356 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD-LPMIDQYALFQLENIVK 414
           + I  ++L+++SD YR++R T RY+LGNL  +     +  DD L  +D++AL +LE++  
Sbjct: 638 IRISNEILQRLSDAYRRIRNTARYILGNLSGFDPSRDMVADDQLLELDRWALAKLEDLAG 697

Query: 415 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 474
            + ++YE Y+F  I+  +  F  V++S+FY DV KDRLY  GT S  RRS QT +   L 
Sbjct: 698 RVEKAYEDYEFHIIYHAVHNFCSVEMSSFYLDVLKDRLYVSGTDSIARRSAQTAMYRILD 757

Query: 475 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 534
            I R+IAP+L   AE++W  +P       G  +E V   ++      +R   + E Y   
Sbjct: 758 CITRLIAPVLSFTAEEIWAFMP-------GERSESVHLGEFVQFPTSFRDAALEERY--D 808

Query: 535 KILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIF 594
            +LE+R++V+K LE+AR  K+IG SL+A+V L     +    L +        D L  +F
Sbjct: 809 NLLEIRSDVSKALELARNEKVIGHSLDARVLLSAPAGATLELLEKY------RDQLASLF 862

Query: 595 IISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVE 654
           I+SQVE++    +GL      +GE L + K    + V +A G KCERCWNY+T VG   E
Sbjct: 863 IVSQVELVDDLADGL------TGENLPDLK----VKVEKALGEKCERCWNYATSVGDSAE 912

Query: 655 HPTLCSRCYEVL 666
           HP LC RC  VL
Sbjct: 913 HPALCHRCVAVL 924



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 180/332 (54%), Gaps = 35/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  +W+ PYLT+   YEA       +   +G +++GKKP+HW  S  TALAEAE+
Sbjct: 140 FERLGVMGEWDRPYLTMTHHYEAVTARELARFVEKGGLFKGKKPIHWCSSCVTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY + H S SIY  F      P+    LN+     L   +WTTTPWT+PAN AV +N  L
Sbjct: 200 EYAD-HKSPSIYVKFPFDGELPAE---LNDLAGRKLSFVIWTTTPWTIPANLAVCLNPNL 255

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIKK 181
            YAVVE      GD                      +++A  LV  +  + G +   + K
Sbjct: 256 PYAVVET-----GDE--------------------LLVMAEGLVSGVMQELGLENYRVLK 290

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
           T      E     HP  +R   ++I GD++T E+GTG VHTAPGHGQ+DYV  L YGL +
Sbjct: 291 TFEAPIFERKTCRHPFYDRP-SLLILGDHVTLEAGTGCVHTAPGHGQDDYVVGLAYGLDV 349

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            +PVD+ G++ E+   F G+ +    N AV   L E  +L+ E    H YP+ WR KKP 
Sbjct: 350 YNPVDNYGRYYEDVEFFGGMKI-NQANGAVNAKLTEVGALLKESEVSHSYPHCWRCKKPI 408

Query: 302 IFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           IFRATEQWF S+E  G R+ A+  I  V WVP
Sbjct: 409 IFRATEQWFISMEANGLREKALGHINDVNWVP 440


>gi|183221665|ref|YP_001839661.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911741|ref|YP_001963296.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|254782416|sp|B0SBW4.1|SYI_LEPBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782417|sp|B0STE5.1|SYI_LEPBP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|167776417|gb|ABZ94718.1| Isoleucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780087|gb|ABZ98385.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase; IleRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 915

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 187/330 (56%), Gaps = 41/330 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
             R+  + D NN YLT+ PE+EA  +EVFG +  +GYIY+GKKPV+W     TA AEAE+
Sbjct: 147 LNRFLCFWDENNKYLTMAPEFEARIVEVFGSLFAKGYIYKGKKPVYWCIDLATAHAEAEI 206

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + HVS SIY  F +                D    +WTTTPWT+PAN A+  N +L 
Sbjct: 207 EY-QNHVSPSIYVKFAVKGE------------TDTHCLIWTTTPWTLPANLAICFNEELP 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y      SL + D+                     +I+A  L   +E K G  L   K+L
Sbjct: 254 Y------SLFQSDAHGR------------------LILADGLKEAVEQKTGITLTKIKSL 289

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
           + +DL+   ++HP  +R+  + + G+++T ++GTG VHTAPGHG +DY      GLP LS
Sbjct: 290 SNADLKQMVFLHPFLDRES-IPLFGNHVTLDAGTGCVHTAPGHGTDDYRVGTAAGLPTLS 348

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD G++T+E     G+ +  D N  +V+ L E+ +L+    + H YP+ WR+KKP IF
Sbjct: 349 PVDDYGRYTDEFEMMKGIKIW-DANPKIVELLREKNALVHFSEFTHSYPHSWRSKKPLIF 407

Query: 304 RATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           RAT QWF S++  G R  ++ AI +V+W+P
Sbjct: 408 RATPQWFFSIDHNGLRDESLKAIDKVQWIP 437



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 163/331 (49%), Gaps = 38/331 (11%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGAD+LRLWVS+ D+  DV IG   ++ +S+ YRK+R T RYLLGN     +  ++  ++
Sbjct: 617 YGADILRLWVSTQDFRDDVKIGKDSIKTVSEAYRKIRNTFRYLLGNTSAETLTWNLKKEE 676

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  ID+Y L +L  +   +++ Y++YQF +++  I  F  VDLS  YF++ +DR+Y    
Sbjct: 677 LDTIDKYYLHKLAKLNDEVKKLYDTYQFHQVYHKILGFCTVDLSQDYFEIIRDRMYCDAK 736

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S TRRS +  L+  L  + +++APIL    E+VW +             + VF S +  
Sbjct: 737 ESKTRRSSEYTLAVILEVLSKLLAPILSFTTEEVWTSF---------GKKDSVFYSDFSD 787

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           L E W    +        + E + +V K LE AR    +G SLEA+V +     SL    
Sbjct: 788 LTE-WLDESLESKM--KPVFETKEDVQKALEEARKLGKLGKSLEAEVVIDGKKDSLP--- 841

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW-IGVSRAEG 636
                    ++ L   F++S V       NG+        E   E K +   I + + + 
Sbjct: 842 -------FSSEELALFFVVSHVHF---ETNGI-------QEVFSEWKGESGSIQIRKPKH 884

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            +C RCW + ++         LC RC EV++
Sbjct: 885 FECPRCWRHVSETEG-----KLCKRCDEVVS 910


>gi|357406900|ref|YP_004918824.1| isoleucyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
 gi|351719565|emb|CCE25241.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Methylomicrobium alcaliphilum 20Z]
          Length = 941

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 189/337 (56%), Gaps = 31/337 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             F R GV  +W+NPYLT++ ++EA  +   G++S  G++ +G KPVHW     +ALAEA
Sbjct: 138 GEFIRLGVLGEWDNPYLTMNYKFEADIVRALGKISKNGHLSKGAKPVHWCTDCGSALAEA 197

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN----EFLPDLGLAVWTTTPWTVPANAAVA 117
           E+EY + H S +I   F++V      +   +    E    + + +WTTTPWT+PAN AVA
Sbjct: 198 EVEYEDKH-SPAIDVRFQVVDEAAFLARCHHVPEHEGEGPISVVIWTTTPWTLPANQAVA 256

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK- 176
           +N +L+YAVV+ +                     KD  K  +++A  L+     ++G + 
Sbjct: 257 LNPELEYAVVQCE---------------------KDGAKERLVLAEALLKDAMLRYGFED 295

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             +     G  LEN    HP   RQ PV++G D++T E+GTG VHTAPGHGQEDYV  LK
Sbjct: 296 YHVIAYCKGDALENQLLQHPFYARQVPVILG-DHVTIEAGTGAVHTAPGHGQEDYVVGLK 354

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           Y LP+ +PV D G F      F+G  V    N  V+  L EQ  L+  E   H YP+ WR
Sbjct: 355 YDLPVDNPVGDNGVFLPNTELFAGEHVF-TANDHVLAVLAEQGKLVHHESMLHSYPHCWR 413

Query: 297 TKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            K P IFRAT QWF S+E  G R  A++ IG+V+W+P
Sbjct: 414 HKTPIIFRATPQWFISMEKNGLRDKALEEIGKVQWIP 450



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 177/330 (53%), Gaps = 29/330 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 397
           GADVLRLWVS+ DY  ++ +  ++L++ SD+YR+LR T R+LL NL  +    +++  ++
Sbjct: 625 GADVLRLWVSATDYRAEMNVSDEILKRTSDVYRRLRNTARFLLSNLDGFDPALHTVPANE 684

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +D++ + +   + + +  +YESYQF +++Q +  F  VDL  FY D+ KDR YT   
Sbjct: 685 LLALDRWVVDRAYCLQQEVVAAYESYQFHQVYQKVHNFCAVDLGGFYLDIIKDRQYTAKE 744

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-P 516
               RRS QT +     ++ R ++PI+ + A+++W  LP       G  ++ VF   W  
Sbjct: 745 DGLARRSAQTAMYHVAEALTRWLSPIISYTADEIWHYLP-------GQRSQSVFLETWYQ 797

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
            L E  +  P+    FW K++ +R  V+K LE  R    IG+SL A+V L+ D+      
Sbjct: 798 GLFELDKDSPMDRD-FWSKVMAVREAVSKELERVRKTGAIGASLNAEVALYADE------ 850

Query: 577 LREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRA 634
            R     K   + L  +FI S   V+ L S+P+  +       +  +EG   + I VS +
Sbjct: 851 -RYFPVLKQLENELHFVFITSAATVQELASSPDDAV-------QCDLEG---LKIEVSVS 899

Query: 635 EGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
           E  KC RCW+  + +G    HP LC RC E
Sbjct: 900 EHVKCVRCWHQRSDIGDDPNHPELCGRCVE 929


>gi|389580209|ref|ZP_10170236.1| isoleucyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
 gi|389401844|gb|EIM64066.1| isoleucyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
          Length = 931

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 184/331 (55%), Gaps = 33/331 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR+GV  DW+ PYLT+D  YEA   +  G+  L G ++ GKKP++W  +  TALAEAE+
Sbjct: 140 FKRFGVSGDWDAPYLTMDYPYEACIAKECGEFGLSGDMFLGKKPIYWCCNCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F       +   L +     + + +WTTTPWT+PAN  V ++    
Sbjct: 200 EYHD-HTSPSIYVKF---PVEDNAKDLFDADGETVSVVIWTTTPWTLPANLGVCLHPDFV 255

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YA V                        K Q +  +I+A +LV T+  ++G +   I   
Sbjct: 256 YAAV------------------------KTQNQGVLIIAKELVETVMGEFGISDYAIIAD 291

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           L+  DLEN    HP  +R   ++I GD++T E+GTG VHTAPGHG +D++   +YGL   
Sbjct: 292 LSAKDLENRNCKHPFYDRD-SLIILGDHVTLEAGTGCVHTAPGHGADDHIAGNRYGLECY 350

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPV+D G F++    F G  +    N  + K L+E+ +L+ +E   H YP+ WR KKP I
Sbjct: 351 SPVEDNGTFSQGVELFEGQFIF-KANAEINKTLEEKGALLKQENMSHSYPHCWRCKKPVI 409

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           +RAT QWF S++  G RQ A+D I  V W+P
Sbjct: 410 YRATPQWFISMDNLGLRQKALDEINNVHWIP 440



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/329 (37%), Positives = 185/329 (56%), Gaps = 22/329 (6%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGADVLRLW +S DY GDV I   +++Q+SD YR++R T R+LLGN   +        ++
Sbjct: 620 YGADVLRLWAASADYRGDVSISDNIIKQLSDAYRRIRNTCRFLLGNFTGFEPSQVRPIEN 679

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +D++ L +L  +VK  R +Y++Y+F  I+  +  F +VDLS+FY D+ KDR+YT   
Sbjct: 680 MAELDRFILHRLHYVVKRCRAAYDAYEFHVIYHTLHNFCVVDLSSFYLDIIKDRVYTSPE 739

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S TR+  QTV+   L ++V+++APILP  AE+++ ++P     ++    E +      +
Sbjct: 740 NSDTRKDAQTVMFMILDALVKIMAPILPFTAEEIYTHMPLGEIKKESVHMEDMVSLDNAL 799

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D +           W  I  LR EV K LE ART KLIG  L+A V +      +A ++
Sbjct: 800 EDRELAA-------KWENIRALRAEVTKALEEARTAKLIGHPLDAAVEIKLPPGDIADKV 852

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
                A  D D L  IFI+S   V+  T +G +    Y G+  +EG   + I V++A G 
Sbjct: 853 -----ASLDVD-LNDIFIVSNARVV-ETLDGDV----YQGKE-IEG---LAIKVAKASGE 897

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KCERCW +   +G+  +HPT C RC + L
Sbjct: 898 KCERCWRFDENLGTDPDHPTACPRCTQAL 926


>gi|442608795|ref|ZP_21023537.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
 gi|441749844|emb|CCQ09599.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
          Length = 941

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 31/337 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A FKR GV+ DW+NPYLT++ ++EA  I V G++   G++++G KPVHW     +ALAEA
Sbjct: 139 ADFKRLGVFGDWDNPYLTMNFDFEANAIRVLGRIIKNGHLHKGAKPVHWCTDCGSALAEA 198

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGL----LNEFLPDLGLAVWTTTPWTVPANAAVA 117
           E+EY +   S +I   F  V      S       +E    +  A+WTTTPWT+PAN AVA
Sbjct: 199 EVEYQDKQ-SPAIDVRFTFVDQAAIVSAFDMQAGHEGAGLVSTAIWTTTPWTLPANRAVA 257

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TK 176
           VNA L+YA+V++++  EG                   ++  +++ S+LV     ++G   
Sbjct: 258 VNANLEYALVQVEN--EG-------------------QQQRLVLGSELVKDAMDRFGFDH 296

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             +     G+ LE+ R  HP  +   PV++ GD++TT+SGTG+VHTAPGHGQED+   L 
Sbjct: 297 YHVLGYAKGAALEHLRVGHPFYDFDVPVIL-GDHVTTDSGTGIVHTAPGHGQEDFTAGLS 355

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           YGL + +PV   G + E+   F+G  V    N  V++ L E+ +L+  +  +H YP+ WR
Sbjct: 356 YGLEVANPVGANGVYLEDTPIFAGQHVF-KANDNVIELLKEKGALLRHKALKHSYPHCWR 414

Query: 297 TKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            K P IFRAT QWF S++  G RQ ++  I + +W+P
Sbjct: 415 HKTPIIFRATPQWFVSMDQAGLRQNSLSEIKKTQWLP 451



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 186/346 (53%), Gaps = 35/346 (10%)

Query: 323 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           ++G V  + PQ+     GAD+LRLWV+S DYT ++ +  ++ ++ +D YR++R T RYLL
Sbjct: 611 SLGNV--ISPQDVMNKLGADILRLWVASTDYTAEMTVSDEIFKRAADRYRRIRNTGRYLL 668

Query: 382 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
            NL  +    + I+ D+L  +D++ L +   +   + +SY++Y+  ++ Q +  F   +L
Sbjct: 669 ANLSGFNPETDMIATDELVELDRWILARAAELQVELIKSYDNYKTLEVTQKLMNFCTGEL 728

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
            +FY DV KDR YT    S  RRSCQT L     ++ R +API+   A+++W+ LP    
Sbjct: 729 GSFYLDVIKDRQYTAKKDSHARRSCQTALYHIAEAMTRWMAPIMSFTAQEIWELLP---- 784

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIY--FWGKILELRTEVNKVLEVARTGKLIGS 558
              G  + FVF   W    +       G++   FW  +L +R EVN+VLE  R    IGS
Sbjct: 785 ---GKRSAFVFTETWY---DALNGVTEGKLSNDFWQTVLLVRDEVNRVLENERKEDRIGS 838

Query: 559 SLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQ--VEVLPSTPNGLIRNIPYS 616
           +LEA+V L+T    LA +L  +       + L+ + + S+  V+V+   P+  +      
Sbjct: 839 ALEAEVTLYT-GGELAEQLASL------GNELRFVLLTSKAHVQVVQGKPDNAV------ 885

Query: 617 GEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           G  +    D ++I  +    SKC+RCW+Y   VG+   H ++C RC
Sbjct: 886 GSEI----DGLFISATATAASKCDRCWHYCDDVGAHEGHESICGRC 927


>gi|261367027|ref|ZP_05979910.1| isoleucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571145|gb|EFB76680.1| isoleucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 924

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 214/395 (54%), Gaps = 58/395 (14%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  D+ NPYLTL PE+EA Q+E+FG+M+ +GYIY+G K V+W P  RTALAEAE
Sbjct: 141 QFKRLGVQGDFENPYLTLRPEFEARQVEIFGEMAKKGYIYKGMKAVYWCPEDRTALAEAE 200

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           +EY E     SIY  F++   P       N  L    + +WTTT WT+PAN A  +N  L
Sbjct: 201 IEYAEDECD-SIYVRFKLTGDPKGVLAKHNIPLEKAWIVIWTTTTWTLPANVATCLNPDL 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV-PTLEAKWGTKL-VIK 180
           +YA V+I     GD                     + I+A++LV PT++A    +  V+ 
Sbjct: 260 EYAFVKI-----GDE--------------------YHIMAAELVKPTMDACHIEEYEVMP 294

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY--G 238
           +T+ G +LE   Y HP  +R   +VI GD++T E GTG VHTAPGHG ED+   + +   
Sbjct: 295 ETVHGDELELMEYQHPFLDRT-GLVILGDHVTLEGGTGCVHTAPGHGVEDFEVCVNHYPQ 353

Query: 239 LPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           LP++ PVDD G  TEEAGK F+GL V    N  +++++ E   L+  +   H+YP+ WR 
Sbjct: 354 LPVVVPVDDAGCLTEEAGKEFAGLKVWA-ANKVILEHIKETGHLMGVQHITHQYPHCWRC 412

Query: 298 KKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL-------------- 343
             P IFRATEQWF S++ F++    AI  V W      P +G D +              
Sbjct: 413 HHPIIFRATEQWFCSIDAFKEDVYKAIDSVHW-----QPAWGHDRMTGMVRDRSDWCISR 467

Query: 344 -RLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 372
            R+W     V      G   I    ++ +SD++RK
Sbjct: 468 QRVWGVPIPVFYCKKCGKYHITDASIKAVSDLFRK 502



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 179/333 (53%), Gaps = 35/333 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGAD++RLWV+S DYT DV  G ++ RQ+S+ YRK+R T R++LGNL D+    ++++ D
Sbjct: 625 YGADIIRLWVASSDYTVDVRAGKEIFRQLSEAYRKMRNTARFMLGNLSDFDPNKDAVADD 684

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  ID++AL     +   +R++Y+ Y F + +  +  F ++D+SNFY DV KDRLY   
Sbjct: 685 QLYEIDRWALEACNALTATMRDAYDHYDFSRAYHALYNFCVIDMSNFYMDVIKDRLYCA- 743

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RR  QT L   L+   +++APIL   ++++W  +P    ++D    E V E+K P
Sbjct: 744 -DDHARRCAQTALYRILVDFTKLLAPILCFTSQEIWSYVPKMPGMKDYVVFEQVPEAK-P 801

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              E +          W +I+ +R +V KVLE AR  K IGSSLEA + L+ ++  +   
Sbjct: 802 AAGEAFTA-------KWDRIMAIRDDVKKVLEQARADKQIGSSLEAALTLYCNE-DVYKF 853

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG-KDKVWIGVSRAE 635
           L  +       D L  +FI+SQV +               GE  V+G  D + +    A 
Sbjct: 854 LNSI-----PMDELADLFIVSQVRL-------------EQGEGGVKGVVDGLGVQAEHAA 895

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           G+KC RCW Y T V        LC RC +VL +
Sbjct: 896 GAKCLRCWKYDTAVND----NGLCPRCAKVLGM 924


>gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex]
          Length = 965

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 186/331 (56%), Gaps = 26/331 (7%)

Query: 3   SFKRYGVWADWNN-PYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           +F R+GV ADW++  Y T  P Y  +Q+++F  +  +G +YR  KPV+WSPSSRTALAE+
Sbjct: 152 AFSRWGVMADWDSGCYFTFTPSYVTSQLKIFCDLYDKGLVYRDYKPVYWSPSSRTALAES 211

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           ELEY   H S SIY    + +  P      ++  P + L VWTTTPWT+PAN AV  N  
Sbjct: 212 ELEYNVNHFSSSIYLKITLQTPLPECIADSSKEAP-VYLVVWTTTPWTIPANQAVCYNPD 270

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 181
            +Y +V  +S                    KD K  ++++A +L  +LE  W     + K
Sbjct: 271 KKYCLVRCKSH-------------------KDSK--YLVIALELYHSLEQLWSCHFTLIK 309

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              G       Y HP    +   ++ G++++ + GTG VHTAP HG +D++ +L++ +PI
Sbjct: 310 EFDGDIFNGHYYSHPFRKNESMPLLPGNHVSVKKGTGFVHTAPAHGPDDFLVALQHKMPI 369

Query: 242 LSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           L+ VD++GK++ +AG    G DVL  G   V+K L  Q  +I +E + H YPYDWRTK P
Sbjct: 370 LNLVDEDGKYSADAGSDLCGNDVLDKGQDIVLKLL--QNDVIFKENFTHSYPYDWRTKLP 427

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I RA+ QWF   +  +  +++A+  V  VP
Sbjct: 428 VILRASLQWFIDTDKLKTKSIEAMKDVSVVP 458



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 160/350 (45%), Gaps = 37/350 (10%)

Query: 333 QEAPGYGADVLRLWVSS--VDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           ++ P  G D LR WV+S      G++ +G   ++Q S+  +K+R  LR+LLGNL+     
Sbjct: 639 KKQPAVGIDALRWWVASHVSANGGNISVGIHSIQQASEDIQKMRSVLRFLLGNLNAVTCS 698

Query: 391 N--SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
                S   L + DQY L  L    +N   +Y+   F K+  ++  FI   +S FY  + 
Sbjct: 699 QFKQFSPTTLGLTDQYMLHLLSEFAENALSAYQEMNFRKVTSLVSAFINTSVSAFYCSIV 758

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           K RLY    TS  R S   VLS  L  I  +IAPILPHL E++  + P  +  ++G    
Sbjct: 759 KHRLYCHSLTSEDRLSALFVLSEILDQITLIIAPILPHLTEEIEMHHP--WRADNGG--- 813

Query: 509 FVFESKWPVLDEKWRTFP--VGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
            +F ++    D K   F   V  I+     L LR  VNK +     G+L       ++  
Sbjct: 814 -LFRNR-KFADMKKSDFSDVVDRIH---PSLSLRQSVNKAI-----GRLNTQEWNVEISA 863

Query: 567 FTDDASLASRLREMCTAKHDADT-LQRIFIISQVEVL-PSTPNGLIRNIPYSG------E 618
           F  D+     L+ + + K   D+ L  +  +S V +L  +  + + + +  S       +
Sbjct: 864 F--DSRDLHLLQMLQSEKKTHDSALCDLLQVSMVTLLGKNDEDSIAKELDNSNVDDSFTK 921

Query: 619 YLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
              +   ++ I +S+ + + C RC  Y++  G+      LC  C +V ++
Sbjct: 922 IEFQHFGQIQITLSKTKLALCSRCRRYTSSDGN------LCCSCLKVCSL 965


>gi|451981687|ref|ZP_21930036.1| Isoleucyl-tRNA synthetase [Nitrospina gracilis 3/211]
 gi|451761140|emb|CCQ91300.1| Isoleucyl-tRNA synthetase [Nitrospina gracilis 3/211]
          Length = 939

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 182/331 (54%), Gaps = 33/331 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ADW+ PYLT+   YE   +  F +    G +Y+G KPVHW    RTALAEAE+
Sbjct: 149 FKRLGVFADWDKPYLTMSFGYEGTIVREFLKFLESGMVYKGLKPVHWCTHCRTALAEAEV 208

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F + S   +    ++         +WTTTPWT+PAN AV ++   +
Sbjct: 209 EYAD-HNSPSIYVKFAVKSEWKNQIDGVD--AKKASFVIWTTTPWTLPANLAVCLHPDFE 265

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  VEI     G+                       IVA++ +  L  +W  T   +   
Sbjct: 266 YTAVEIA----GEQ---------------------YIVAAERLSALILEWDVTDYKVLGK 300

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            AG DLE     HP  +R+ PV++ GD++T E GTG VHTAPGHGQEDY+  LKYGL   
Sbjct: 301 CAGKDLEGVVCQHPFIDRESPVIL-GDHVTLEQGTGCVHTAPGHGQEDYIVGLKYGLDTY 359

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           +PVDD G F  E   F G  V+   N  ++K L+E   LI ++  +H YP+ WR + P I
Sbjct: 360 NPVDDGGVFKPEVEFFGGQFVM-KANPEIIKKLEELGKLIHQDRVDHSYPHCWRCRTPII 418

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           FRAT QWF S++  G RQ A+  I + +WVP
Sbjct: 419 FRATAQWFISMDDKGLRQKALAEIDKTRWVP 449



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 194/326 (59%), Gaps = 24/326 (7%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           YGA++LRLWV+S +Y  D+ I  ++L+++++ YRK+R T R+LLGNL D+    + +  D
Sbjct: 628 YGAEILRLWVASENYREDIRISHEILKRLTEAYRKIRNTFRFLLGNLSDFDPKTDRVPVD 687

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           ++  ID Y L + + + + I++++E Y+F   +     F IVDLS FY D+ KDR+YT  
Sbjct: 688 EMEEIDHYILHRFKKVNERIQKAFEEYEFHVFYHTFYNFCIVDLSAFYLDILKDRIYTYP 747

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
            TS  RRS QT +   L  + +++APIL   A++VW+ +P     +DGS  E V  S +P
Sbjct: 748 KTSHGRRSGQTAMYDLLKGMAQMMAPILSFTADEVWKYMP-----DDGSKTESVHLSVFP 802

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             D    TF       W +I EL+ EV+K LE+ R  K+IG SL+A V+L     +    
Sbjct: 803 --DLAGVTFSDELATKWERIKELKGEVSKALELRRREKVIGHSLDASVHL-----AAPEP 855

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           +R +  +  ++D+L+ IFI+S+VE++P      +   PY  + ++EG   + IGV  A G
Sbjct: 856 MRPLLES--ESDSLKYIFIVSEVELVPQ-----LDGDPYQSD-VIEG---LKIGVQPAPG 904

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRC 662
            KCERCWNY  +  +  +HP +C RC
Sbjct: 905 KKCERCWNYFVEAEASGDHPGICQRC 930


>gi|365851168|ref|ZP_09391609.1| isoleucine--tRNA ligase [Lactobacillus parafarraginis F0439]
 gi|363717367|gb|EHM00745.1| isoleucine--tRNA ligase [Lactobacillus parafarraginis F0439]
          Length = 960

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 196/333 (58%), Gaps = 33/333 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV  DW++PYLTL  ++EAA++ VFG  + +G IY+GKKPV+WS SS +ALAE
Sbjct: 161 MTEFKRLGVAGDWDHPYLTLQHQFEAAEVRVFGAFAKRGLIYKGKKPVYWSWSSESALAE 220

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +     + Y   +++       G+ ++   +  + VWTTTPWT+PA+  + V+A
Sbjct: 221 AEVEYHDVTSPTAFYGE-KVIDG----KGVFDD--QNTYMVVWTTTPWTIPASEGITVDA 273

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
              YAV++ +                      D  + F +VAS+LV  +    G   + +
Sbjct: 274 GFDYAVIQPE----------------------DDDRQF-VVASELVSKVSELVGWKNVKV 310

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G+D+E     HP D+ +  + + GD++  E GTGLVHTAPG+G++DY    KYGL
Sbjct: 311 VKTVKGADMEGVLAEHPFDHNRKLLTMLGDFVDLEEGTGLVHTAPGYGEDDYNVGRKYGL 370

Query: 240 PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
            I +PVD++G  T+EAG  F+G+    D N   +  L     L+   P +H YP+DWRTK
Sbjct: 371 DIFAPVDNKGYLTKEAGPDFAGV-FYDDANKIALDKLKAAGLLLHYMPLKHSYPFDWRTK 429

Query: 299 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           KP IFRAT QWFASV+  +   ++AI  VK+ P
Sbjct: 430 KPIIFRATPQWFASVDKIKDDILNAIEDVKFYP 462



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 34/333 (10%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+SVD + DV +      ++SD Y+K+R T+R+LL N  D+    NS+ +D+
Sbjct: 642 GAEIVRLWVTSVDTSADVRVSMDNFAKISDSYKKIRNTMRFLLANTTDFDPQTNSVPFDE 701

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +   DQY    L   +K  R++YE+Y F  +++ +  F+  DLS FY D+AKD +Y    
Sbjct: 702 MDSQDQYMTVLLNKFLKEARDAYENYDFLTLYKKLLGFVTSDLSAFYLDMAKDIVYIDRA 761

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAYTLEDGSAAEFVFESKW 515
               RRS QTV+   + ++ +++ P+LPH AE++W+ L  P  Y           F++  
Sbjct: 762 DGHARRSMQTVMYNVVTTLTKLMTPVLPHTAEEIWEFLKEPEDYVQLSDIPEPKHFDNDA 821

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +L +            W K +  R +V KVLE AR  K IG S EA + ++       S
Sbjct: 822 AILSK------------WAKFMTYRDDVLKVLEEARDAKQIGKSSEAALTIYA-----TS 864

Query: 576 RLREMCTAKHDADTLQRIFIISQVE--VLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            ++++  + +    L+ + ++SQ++       P+   +   +    LV+           
Sbjct: 865 EVKDLLDSLN--VDLKTVLLVSQLDFKTFNDAPDSSTKFDSHGLALLVQP---------- 912

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           AEG  CERC    T VG+  ++PT C  C E++
Sbjct: 913 AEGKTCERCRLVKTDVGADSDYPTFCQSCAEIV 945


>gi|343492205|ref|ZP_08730578.1| isoleucyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
 gi|342827545|gb|EGU61933.1| isoleucyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
          Length = 947

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 196/338 (57%), Gaps = 31/338 (9%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
           SFKR G+  +W+ PY T+D   EA  I   G+++ QG++ +G KPVHW     +ALAEAE
Sbjct: 140 SFKRLGILGEWDKPYRTMDFATEANIIRALGKIADQGHLLKGFKPVHWCTDCGSALAEAE 199

Query: 63  LEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAV 116
           +EY +  VS SI   F+      ++S    T G  +E   D+ + +WTTTPWT+PAN AV
Sbjct: 200 VEYKD-KVSPSIDVRFKAADEAALLSKFNLTEG--HEGQGDISIVIWTTTPWTLPANRAV 256

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 176
            +   L+Y +++     EGD ++  NK  R            IIVAS+L   +  + G +
Sbjct: 257 CLRDDLEYVLIQT----EGDDSSE-NKAER------------IIVASELAKDVMDRAGIE 299

Query: 177 LVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
                  A G+DLE  ++ HP  +   P ++G D++TTESGTG+VHTAPGHGQED+    
Sbjct: 300 NFHNLGFAKGADLELTQFNHPFYDFSVPAILG-DHVTTESGTGVVHTAPGHGQEDFAVGQ 358

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           KYGL + +PV   G +  +   F+G  V    N AVV+ L E+ +L+    YEH YP+ W
Sbjct: 359 KYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLRERGALLHHHAYEHSYPHCW 417

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           R K P IFRAT QWF S++  G R  A++AI  V+W+P
Sbjct: 418 RHKTPIIFRATPQWFVSMDQAGLRAKALEAIKGVQWMP 455



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 196/355 (55%), Gaps = 32/355 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 606 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 663

Query: 372 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           ++R T R+ L NL  +     I   D++  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 664 RIRNTSRFFLANLSGFNPETDIVPADEMVALDRWAVGRALAAQEEIIKAYDEYNTHAVMQ 723

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            + +F  +++ +FY D+ KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 724 RLMQFCSIEMGSFYLDIIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 783

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIY--FWGKILELRTEVNKVLE 548
           +W  +P       G   +FVF  +W   D  +      E+   FW +I ++R  VNK LE
Sbjct: 784 IWNQMP-------GERGKFVFADEW--FDGLFGLAEGEELSNEFWTEIQQIRDAVNKQLE 834

Query: 549 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 608
            AR  K+IG +L+A+V L+ +DA LA+++ ++       D L+ + +IS+  V       
Sbjct: 835 SARNEKVIGGALQAEVTLYAEDA-LAAKMNKL------EDELRFVLLISKATVRA----- 882

Query: 609 LIRNIPYSGEYL-VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
            + + P S +   VEG   +++ V  +E  KC+RCW++S  VG+   H  +C RC
Sbjct: 883 -LADKPESAQATDVEG---LFVEVKASEDPKCDRCWHHSPDVGTIKGHEKICGRC 933


>gi|422821711|ref|ZP_16869904.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
 gi|324990662|gb|EGC22598.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 930

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 192/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G   + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +   VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIMTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     V   + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 179/341 (52%), Gaps = 36/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V
Sbjct: 606 PSDVEKHFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPV 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++Y++L  +D+Y   +   +V+ IR +Y  ++F  I++ I  F+ VDLS FY D AK
Sbjct: 666 EDAVAYEELRSVDKYMTIRFNQLVETIRNAYADFEFLTIYKAIVNFVTVDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  RR  QTV    L+ I +++ PILPH AE++W  L       +    EF
Sbjct: 726 DVVYIEAAKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYL-------EHEEEEF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKD 625
            ++      ++ +  A  ++D  Q + I+SQ+ +   P+    L+              +
Sbjct: 835 PNEV-----IKTLLEAV-NSDVAQ-LLIVSQLTIAEGPAPEGALVF-------------E 874

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V   V  A+G  C+RC    T V        +C  C E+L
Sbjct: 875 DVAFVVEHAQGQVCDRCRRIDTTVQERSYQALVCDHCAEIL 915


>gi|157363246|ref|YP_001470013.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980059|sp|A8F465.1|SYI_THELT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|157313850|gb|ABV32949.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 911

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 206/388 (53%), Gaps = 57/388 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R GV  DW N Y TL+PEYE    E+F ++   GY+YR  KPV W  +  TALA+AE+
Sbjct: 140 FQRLGVIGDWENYYATLNPEYEYKIYEIFAKLVEDGYVYRALKPVLWCNNCGTALAQAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SIY  F+M ++        NE++      +WTTTPWT+P N  +AV+   Q
Sbjct: 200 EYHD-HDSPSIYVKFKMENSE-------NEYI-----IIWTTTPWTLPGNTGIAVHPDQQ 246

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  +E+ S                        +++I+    L   ++     +  I +  
Sbjct: 247 YVKIEVGS------------------------EIWILAEKLLKMAMQEIGIDEYRILEKF 282

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDY-VTSLKYGLPIL 242
            G  LE  + VHP+ +R+  + I  D++  E+GTG VH APGHG+EDY    L  GL ++
Sbjct: 283 KGHFLEGKQAVHPIFDRKSRI-ITADFVDMETGTGCVHIAPGHGEEDYEFGHLVNGLAVI 341

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SPVD++G FTEEAGK+SG+ +    N  +++ L    SL+ E   +H YP+ WR KKP I
Sbjct: 342 SPVDEKGYFTEEAGKYSGMHI-EKANKQIIEDLKNNGSLLKESTIKHSYPHCWRCKKPVI 400

Query: 303 FRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLWVSSV 350
           FRATEQWF SVE    RQ  ++ I  V W+P           +E P +     R W + +
Sbjct: 401 FRATEQWFISVEKNNLRQRVLENIQNVAWIPAWGKNRISAMVEERPDWCISRQRAWGTPI 460

Query: 351 -----DYTGDVMIGPQVLRQMSDIYRKL 373
                    +V++  +++R  ++I +K+
Sbjct: 461 PAFRCSKCSEVVLDARLIRHFAEIVKKM 488



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 181/336 (53%), Gaps = 32/336 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    YGADVLRLW++S DY  D+ I   ++ Q  ++Y+K+R T+RYLLGNL D+ V 
Sbjct: 604 PLEVCSKYGADVLRLWLASSDYFNDIRISKNIIFQQVEVYKKIRNTIRYLLGNLQDFSVT 663

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           +SI +  +  +D++AL +L+ I+K++ E+YESY+F K + I+ ++  V+LS  Y D+ KD
Sbjct: 664 DSIGFQKMLPVDRWALGRLQQIIKSVTEAYESYEFSKAYNILVKYCSVELSAIYLDIVKD 723

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY  G  S  RRS QTVL   L S++ + +PIL    E+ ++ L F          + V
Sbjct: 724 RLYVEGKHSLKRRSAQTVLYNILKSLLVMFSPILAFTCEEAYEFLNFG-----EKKYQTV 778

Query: 511 FESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDD 570
               WP   E++       +  + ++L+LR  V K LE +R   LIG SL+AKV + T  
Sbjct: 779 MAENWPEYKEEY--IDTNLMNDFEELLQLRDLVLKALEESRQNGLIGHSLDAKVAIKTGS 836

Query: 571 ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIG 630
                 L+     K+ A  L+  FI+S+VE+  S  N                   + I 
Sbjct: 837 KKTLDLLK-----KYSA-YLEEFFIVSKVEICNSDEN-------------------LHIE 871

Query: 631 VSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           V  AEG KCERCW Y     S  E P +C RC  VL
Sbjct: 872 VEHAEGEKCERCWKYDPLTNSDSEFPNICPRCMAVL 907


>gi|295692697|ref|YP_003601307.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030803|emb|CBL50282.1| Isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 928

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 196/336 (58%), Gaps = 42/336 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV ADW++PY+TL PE+EAA+I VFG+M  +GYIY+GKKPV+WS SS + LAE
Sbjct: 136 MTDFKRLGVMADWDHPYITLQPEFEAAEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +    R IY  F ++       G+L+    D  L +WTTTPWT+P+N  + VN 
Sbjct: 196 AEVEYHDIKSPR-IYVAFPILDG----KGILDS---DTSLVIWTTTPWTIPSNVGITVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           K  Y VVE+                       D+K V   + SD +P +    G K   +
Sbjct: 248 KFDYDVVEVN----------------------DKKYV---IGSDRLPAVAEDLGWKDYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KTL G+D +   Y HP+ +    +V+   Y+T + GTGLVH A G G++DY    +YGL
Sbjct: 283 LKTLKGTDFDRMTYKHPLYD-VTGLVMNDTYVTDDDGTGLVHNATGFGEDDYNVGRRYGL 341

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           P+ SP+D +G+FT+E       D++G    D N  V   L +  +L+  + + H YP+DW
Sbjct: 342 PVFSPMDAQGRFTDEV---PDPDLVGMFYDDANKVVADKLKKAGALLKLDFFTHSYPHDW 398

Query: 296 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           RTKKP I+RAT QWFAS++ FR   +D I +  ++P
Sbjct: 399 RTKKPVIYRATTQWFASIDKFRDQILDQIKKASFIP 434



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 177/329 (53%), Gaps = 29/329 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 397
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    S ++YDD
Sbjct: 614 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKESRVAYDD 673

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L +++K+   +Y+ + F  +F+ + +FI  DLS FY D AKD LY  G 
Sbjct: 674 LRSVDQYMEVKLNDLIKDCIAAYDKFDFTDVFKKVFKFISNDLSAFYLDFAKDVLYIDGQ 733

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S  RRS QTV+    + + +++ PILPH  E++W  L            ++V  +  P 
Sbjct: 734 DSHARRSMQTVIYDAAVKLAKILTPILPHTMEEIWGFLK--------EPEDYVQLANMPK 785

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           ++E      + E   WGK ++LR +V K LE AR  KLIG S EA V ++ D  + A  L
Sbjct: 786 VEEFANHDELLE--NWGKFMKLRDDVLKALEDARNKKLIGKSFEAAVTIYPDKETKA-ML 842

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +++     DAD  ++I I+S++ +            P + E L    +   + V  AEG 
Sbjct: 843 QDL-----DAD-FRQILIVSKLTIADG-------EAPDNAEQL----NNASVVVEHAEGE 885

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            C RC    T +G   + P LC RC +++
Sbjct: 886 VCPRCRMIRTDIGVDPKLPMLCGRCAKIV 914


>gi|388853980|emb|CCF52324.1| probable ISM1-isoleucine-tRNA ligase, mitochondrial [Ustilago
           hordei]
          Length = 1096

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/362 (38%), Positives = 208/362 (57%), Gaps = 39/362 (10%)

Query: 2   ASFKRYGVWADWNN--PYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 59
           + F ++G+ ADW+N   Y TLDP YEA Q+ VFG+M  +G IYR  +PV+WSPS+RTALA
Sbjct: 220 SEFGQFGIMADWSNDATYRTLDPAYEARQLRVFGEMVRKGLIYRQYRPVYWSPSNRTALA 279

Query: 60  EAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVA 117
           E+ELEY E H+S+++Y  F+M++ P      G   +F   L L +WTTTPW++P+N AV 
Sbjct: 280 ESELEYREDHLSKAVYVAFKMIAGPELLQKLGQDADFDHRLNLIIWTTTPWSLPSNMAVN 339

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKL 177
           VN  L+Y++V  ++  EG        +     VL        IV  +     + K  T  
Sbjct: 340 VNPGLEYSIVR-RAGREGPYYVVGTDRIEALQVLPSS-----IVVGERDAEGDGKGPTFG 393

Query: 178 VIKKT--LAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 232
            +++   + GSDL +  Y  P+   D++  P+++  DY+T  SGTGLVH+AP HG EDY 
Sbjct: 394 PLEEVARVRGSDLTDSTYRTPLSASDSKPRPILM-ADYVTAVSGTGLVHSAPAHGAEDYQ 452

Query: 233 TSLKYGL----PILSPVDDEGKFTEE---------AG----------KFSGLDVLGDGNV 269
              + G      I SPV+DEG+++ +         AG          +  G +V+ +G  
Sbjct: 453 IWKQQGHIHRDGIFSPVNDEGRYSSDILQLDAASSAGSSEDDTKLGQRLLGKEVISEGAK 512

Query: 270 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            V   L E+ +LI  +   HKYPYDWR+K+P I RAT QWFA+++  ++ A++A+  V +
Sbjct: 513 EVTAILQERGALISAQTLRHKYPYDWRSKQPVIVRATAQWFANLDRIKEQAIEALQDVTF 572

Query: 330 VP 331
           VP
Sbjct: 573 VP 574



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 19/337 (5%)

Query: 334  EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI 393
            + P YG DVLRLWV+  DYT D  IG  ++ + ++  RKLR T R++L NL        +
Sbjct: 771  DQPAYGVDVLRLWVARSDYTTDPPIGNVIISKTAETLRKLRNTARFMLANLPASDKVAKL 830

Query: 394  SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
                + ++D++ + +L  + +    +YE Y F ++ + +  F    LSN Y DV KD LY
Sbjct: 831  DKAKMNLLDRFVMQELYQLERACAAAYEVYDFAQVVRRLTEFTNATLSNLYLDVGKDSLY 890

Query: 454  TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV--WQNLPFAYTLEDGSAAEFVF 511
               + +  R+    V+   L ++  ++API P L E++  ++N   +  +E    AE VF
Sbjct: 891  LDESANERRQMIVAVVDQILRTMTGIMAPITPFLCEEIFHFRNGASSDPVEGVKGAESVF 950

Query: 512  ESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
             + WP +DE W      E     ++L+LR     ++E AR    I +S E ++ L   D 
Sbjct: 951  INGWPSVDETWNDKKAVE--ECKQLLKLRDASLVMIEEARQASHIKTSFEVEIDLIIKDR 1008

Query: 572  --SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI 629
              ++AS L       H    L  +F +++V V+       +    +S     E +D V I
Sbjct: 1009 QHAIASAL------DHYGSELTELFNVARVNVVEQGQAESVSKQVFSSR---EDEDGVTI 1059

Query: 630  GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             V R+   +C RC      +    E   LC RC  V+
Sbjct: 1060 RVCRSPRHRCPRC----RALRKDSESDRLCRRCQSVV 1092


>gi|325294834|ref|YP_004281348.1| isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 187/334 (55%), Gaps = 41/334 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW NPY+T+DP+Y+A  +   G+   +G ++R KKPV+W P+  TALAEAE+
Sbjct: 143 FIRLGVIGDWKNPYITMDPKYQADIVRELGKFYERGLVHRAKKPVYWCPNCVTALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY +  VS SIY  F++++      G+    LP +  L +WTTTPWT+PAN AVAVN +L
Sbjct: 203 EYAD-EVSPSIYVAFKIIN----DKGI---NLPENTYLVIWTTTPWTLPANVAVAVNPEL 254

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT 182
           +Y V                        L   +K FII A  L+     K        KT
Sbjct: 255 EYVV------------------------LNSGEKHFII-AKSLLEDFREKTDLLGETVKT 289

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +LE  +Y HP  +R+  V +  DY+  ++GTGLVH APGHG+EDY   LKY LP+L
Sbjct: 290 FKGIELEGIKYEHPFIDREGQVTLA-DYVAADTGTGLVHIAPGHGEEDYQVGLKYNLPVL 348

Query: 243 SPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
            PVDD GKFT+EA     GL +  + N  ++K L E  +L+      H YP+ WR K   
Sbjct: 349 VPVDDYGKFTDEAPSWLKGLKIW-EANPVIIKRLKEIGALLFAGEINHSYPHCWRCKGKV 407

Query: 302 IFRATEQWFASVEG----FRQAAMDAIGQVKWVP 331
           IFRAT QWF  ++      R+ A+  I +V+W+P
Sbjct: 408 IFRATPQWFIVMDKGNPTLREVALKEIDKVQWIP 441



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 193/339 (56%), Gaps = 29/339 (8%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P      +GAD+LRLWV+S ++T DV I   +L+Q++++Y+K+R T R++LGNL D+   
Sbjct: 614 PEDVVKKFGADILRLWVASENFTEDVKISENILKQVAEVYKKIRNTFRFMLGNLSDFTPE 673

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S+ YD+L  ID++A+ +   + K I ++Y SY+F KI+++I  +   +LS+ Y D+ KD
Sbjct: 674 ESLVYDELEEIDKWAINRFSILAKEIIDAYNSYKFNKIYRLIYDYCATELSSIYLDILKD 733

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY     S  R+S QT +   L  +  +IAPIL   AE+++  +P       G   E V
Sbjct: 734 TLYCEAPNSKKRKSAQTAIYKILYGLTTLIAPILSFTAEEIYSYIP-------GREKESV 786

Query: 511 FESKWPVLDEKWRTFPVGEIY-FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           F  ++P+  E     P GE+   W K++++++ VNK LE AR  K+IG SLEA + ++ D
Sbjct: 787 FLEEFPLFCES----PDGELLERWEKLMKVKSLVNKALEKARAHKMIGHSLEASITVYVD 842

Query: 570 DASLASRLREMCTAKHDADTLQRIFIISQVEV--LPSTPNGLIRNIPYSGEYLVEGKDKV 627
                  LRE    +   + L  IFI S  EV    + P+  + +     + +++G   V
Sbjct: 843 -----GELREFL--ERYKELLPYIFITSGAEVKQFAAAPSCSVGD-----DEILKG---V 887

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + V +AEG KCERCW YST VG   E P +C RC  VL
Sbjct: 888 RVKVKKAEGQKCERCWMYSTTVGQDSEFPDVCERCARVL 926


>gi|422853764|ref|ZP_16900428.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|325697075|gb|EGD38962.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 930

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 191/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWENPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G   + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +   VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     V   + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVTPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 178/334 (53%), Gaps = 36/334 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+    ++++Y+
Sbjct: 613 FGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYE 672

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ VDLS FY D AKD +Y   
Sbjct: 673 ELRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEA 732

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR  QTV    L+ I +++ PILPH AE++W  L       +    EFV  S+ P
Sbjct: 733 AKSLERRQMQTVFYDVLVKITKLLTPILPHTAEEIWSYL-------EHEEEEFVQLSELP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
               + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++ ++    
Sbjct: 786 ----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVYPNEV--- 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             ++ +  A  ++D  Q + I+SQ+ +   P+    L+              + V   V 
Sbjct: 839 --IKTLLEAV-NSDVAQ-LLIVSQLTIAEGPAPEGALVF-------------EDVAFVVE 881

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            A+G  C+RC    T V        +C  C E+L
Sbjct: 882 HAQGQVCDRCRRIDTTVQERSYQALVCDHCAEIL 915


>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 929

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/336 (38%), Positives = 195/336 (58%), Gaps = 32/336 (9%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           + FKR GV ADW++PYLTLDP+YE   ++VFG +  +G+IYR KKPV+W P+  TA+A+A
Sbjct: 142 SEFKRLGVIADWDHPYLTLDPKYEMFIVKVFGDLVEKGFIYRKKKPVYWCPTCETAMADA 201

Query: 62  ELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           E+EY + + S SI+  F+++  P    T  +L   L D  + +WTTTPWT+PAN A+A N
Sbjct: 202 EVEYSD-YSSDSIFVKFQIILLPEPFKTKEIL---LKDFSVLIWTTTPWTLPANVALAFN 257

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKW-GTKLV 178
            + +YA    +                     +D ++  +IVA  L   ++ K       
Sbjct: 258 KESEYAAAVYK--------------------FEDSREEKLIVAKALAENVKDKIKAVSFE 297

Query: 179 IKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 237
           I     G D  + +  +P V++RQ   ++ G +++ E GTG+VH APGHGQEDY   L+Y
Sbjct: 298 IVWEAKGIDFVSLKCRNPLVEDRQSQGIVAG-FVSIEDGTGIVHIAPGHGQEDYQAGLEY 356

Query: 238 GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           GL I+SPV+D+G +T+E  +F  + +    N  ++  LD +  ++ +    H YP+ WR 
Sbjct: 357 GLEIISPVNDKGLYTKEVPEFENIHIY-KANPLIIGKLDREGKILAKLRLTHSYPHCWRC 415

Query: 298 KKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
             P IFRAT QWF SVE    R+  ++A+  V+W+P
Sbjct: 416 GNPIIFRATPQWFLSVEHNDLRKKLLEAVKTVRWIP 451



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 165/329 (50%), Gaps = 35/329 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 397
           YGADV+RLW++S DY  D+ I  +++R +SD YRK+R T+R+LLGN+ D+ +  ++ + D
Sbjct: 634 YGADVVRLWIASSDYKEDIRISDEIIRGLSDTYRKIRNTIRFLLGNIGDFDLKKALPFKD 693

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +   D+YAL +L+ ++     +YESY+F K    I  F  V LS FY DV KD LY    
Sbjct: 694 MQETDKYALSRLQQLISISLAAYESYEFHKAAAAIGNFCTVFLSGFYLDVLKDVLYCDKK 753

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
               R+S Q+ +      I+R+I+PIL   AE+ W+ L  A  L D   + F+ +  +PV
Sbjct: 754 DGIERKSAQSAMLKICSVIIRLISPILSFTAEEAWREL--AKLLYDVPQSVFLLD--FPV 809

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
            D K+       +  W KIL +R E     E  R  K+IGS+LE         ASL  R 
Sbjct: 810 TDSKY-VLHAETLEKWEKILYVRKEALAAYERLRQNKVIGSNLE---------ASLNIRY 859

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
            +               +   ++++  T         +S     + +D + I  +++E  
Sbjct: 860 GQKYNE-----------VFKDLKLVNLTLGSWDVKCNFS-----DKEDDLLIEAAKSEYE 903

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           KC RCW +   +        LC RC EV+
Sbjct: 904 KCARCWRHIDGIKD-----GLCPRCREVI 927


>gi|323352732|ref|ZP_08087702.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121768|gb|EFX93514.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 930

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 191/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWENPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G   + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSDKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +   VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     V   + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 184/349 (52%), Gaps = 34/349 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V
Sbjct: 606 PSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPV 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++Y++L  +D+Y   +   +V+ IR +Y  ++F  I++ I  F+ VDLS FY D AK
Sbjct: 666 EDAVAYEELRSVDKYMTIRFNQLVETIRNAYADFEFLTIYKAIVNFVTVDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  RR  QTV    L+ I +++ PILPH AE++W  L       +  A EF
Sbjct: 726 DVVYIEAAKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYL-------EHEAEEF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPST-PNGLIRNIPYSGEYLVEGKDK 626
            ++      ++ +  A  ++D  Q + I+SQ+ +   T P G +              + 
Sbjct: 835 PNEV-----IKTLLEAV-NSDVAQ-LLIVSQLTIAEGTAPEGALVF------------ED 875

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
           V   V  A+G  C+RC    T V        +C  C E+L    + ++A
Sbjct: 876 VAFVVEHAQGQVCDRCRRIDTTVKERSYQALVCDHCAEILEENFVQAVA 924


>gi|269467789|gb|EEZ79547.1| isoleucyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 923

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 190/337 (56%), Gaps = 48/337 (14%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F+R G+  DWNNPYLT D +YEA  +   G++  +G++ +G KPVHW     +ALAEAE+
Sbjct: 141 FQRLGILGDWNNPYLTKDFQYEADIVRALGEIVEKGHVSKGYKPVHWCTECGSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S +I   FR++        +  +  P + + +WTTTPWT+PAN AVA++  L 
Sbjct: 201 EYKDKK-SDAIDVKFRIID-----DDIFAQTKP-VSVIIWTTTPWTLPANEAVALHPDLN 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK--LVIKK 181
           Y +V++     GD                     + ++A DL+ T   ++G     V K+
Sbjct: 254 YVLVDV-----GDE--------------------YYLLAQDLLETTLKRYGITDAKVGKQ 288

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
              GS+LE  +  HP  ++Q  +++  D++TTE+GTG VHTAP HGQEDYV  +KY LP+
Sbjct: 289 AFVGSELEGLKVQHPFYDKQVSIIL-ADHVTTEAGTGAVHTAPAHGQEDYVVGIKYNLPV 347

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLG-----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
             PVD  G F      F  +++LG       N +V++ L+   +L+  EP EH YP+ WR
Sbjct: 348 ECPVDGRGVF------FKNVELLGGQFIFKANASVIEILENANTLVKHEPIEHSYPHCWR 401

Query: 297 TKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            K P IFRAT QWF S+E  G R +    I +V+W+P
Sbjct: 402 HKTPVIFRATPQWFVSMEQNGLRDSVNAEIPKVQWIP 438



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 182/347 (52%), Gaps = 32/347 (9%)

Query: 323 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 381
           ++G V  +PPQ+     GAD+LRLW++S DYTG++ +  ++L++ +D YR++R T+R++L
Sbjct: 598 SLGNV--IPPQKVVNSLGADILRLWIASTDYTGEMTVSDEILKRSADSYRRIRNTVRFML 655

Query: 382 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 440
            N+  +      + ++ +  +D++ + +  ++   +   Y++Y F  + Q+I  F   DL
Sbjct: 656 SNMQGFDASQHLVDHNKMLDLDKWIVSKTADLQAQVLHGYDTYNFHHVMQLILNFCTNDL 715

Query: 441 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 500
             FY D+ KDR YT    S  RRS Q+ L     ++VR ++P+L   AE++WQ      T
Sbjct: 716 GGFYLDIIKDRQYTTQEDSLARRSAQSALHHLTQAMVRWLSPVLSFTAEEIWQ------T 769

Query: 501 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
           L D        +S +  L   ++   +      G   ++   + K +E  R  K+IGSSL
Sbjct: 770 LSDDQEQSIFLQSWYEGLSTGYKNKAI------GAARKINPYIRKQMEGMRADKVIGSSL 823

Query: 561 EAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYL 620
           +A+V ++ DD    + L ++       D L+ +FI S   +        I N P      
Sbjct: 824 DAEVDIYCDDEVYGA-LAQL------EDELRFVFITSYARIHS------IDNKPSD---C 867

Query: 621 VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           ++  + V+I V ++E  KC RCW++   VG   +HP LC+RC + +A
Sbjct: 868 IDAGEGVFIKVEKSEHEKCVRCWHHRQDVGHDNDHPELCTRCVDNVA 914


>gi|427413496|ref|ZP_18903687.1| isoleucine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
 gi|425715489|gb|EKU78477.1| isoleucine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
          Length = 944

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/342 (38%), Positives = 192/342 (56%), Gaps = 46/342 (13%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 396
           YGADV+RLWVSS DY GDV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y+
Sbjct: 634 YGADVMRLWVSSADYQGDVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYE 693

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  ID++AL +LE + + + E+YE+Y+F  ++  I  F  VDLS+FY DV KD +Y   
Sbjct: 694 NLSEIDKWALLRLEEVRRKVTEAYENYEFHILYHTIHNFCTVDLSSFYLDVMKDTMYAEK 753

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
            T+  RRS QT +   + ++VR++AP+L   AE+VWQ +P     E+G     + E  WP
Sbjct: 754 ATAQVRRSAQTAMYEIVATLVRMVAPVLSFTAEEVWQYMP----KEEGMRESVMLED-WP 808

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
              E      + E   W  +L+LR+E+ K LE AR  K+IG SL+A + ++ D  +   R
Sbjct: 809 TGKEVHYDEALAEK--WSHLLDLRSELTKALETARQDKVIGHSLDAFITVYADGDAF-KR 865

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKD----------- 625
           L E+       D L  + I+S+                    YLVEG+D           
Sbjct: 866 LNEV------KDQLAALLIVSEA-------------------YLVEGRDSAPAEAVATEE 900

Query: 626 -KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
             + + V  +E  KCERCW +   VG   EHPTLC RC +VL
Sbjct: 901 GHLSVVVKPSEYEKCERCWIHRETVGQNAEHPTLCHRCVDVL 942



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/350 (38%), Positives = 191/350 (54%), Gaps = 56/350 (16%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R+GV   + +PYLTL P +E  Q+ +FG+M+ +GYIY+G K V+W     TALAEAE+
Sbjct: 140 FIRFGVLGRFEDPYLTLKPAFEVKQLGIFGEMAKRGYIYKGLKTVYWCTHCETALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WTTTPWTVPANAAVAVNAKL 122
           EY E   S SIY  +  V     T  L     P    AV WTTTPWT+PA+ A++VN  L
Sbjct: 200 EYHEKK-SFSIYVKYAYVDEVKRT--LPENVDPAKAYAVIWTTTPWTLPASQAISVNPDL 256

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT-LEAKWGTKLVIKK 181
           +YA V++     GD                     + ++A +LV + ++        + K
Sbjct: 257 EYAWVQV-----GDE--------------------YYLMAVELVESAMKDAQVEDYKVVK 291

Query: 182 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY---- 237
           T  GSDLE   + HP  NR+  V++ GD++T E+GTG VHTAP HG+ED+    KY    
Sbjct: 292 TFPGSDLELATFKHPFVNREVKVLL-GDHVTLEAGTGCVHTAPAHGEEDFGIFQKYNKEG 350

Query: 238 --GLPILSPVDDEGKF-----------TEE--AGKFSGLDVLGDGNVAVVKYLDEQMSLI 282
                ILS V+  G +           TEE  AGK      + +  V ++K L    +L+
Sbjct: 351 KINTEILSFVNATGNYVAAVDNDRYGDTEEMLAGK-----EIHEAEVPILKILAHNGALL 405

Query: 283 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVP 331
            +    H+Y + WR K P I+RATEQWF+SV+G+R+AA+D I  QV+W+P
Sbjct: 406 HKGTLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRKAALDVIDNQVQWIP 455


>gi|347730910|ref|ZP_08864020.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. A2]
 gi|347520416|gb|EGY27551.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. A2]
          Length = 935

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 184/332 (55%), Gaps = 34/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W+ PY+T+DP YE+A     G     G + R KKP++W  S +TALAEAE+
Sbjct: 141 FKRLGVLGAWDKPYMTMDPAYESATARELGNFVAAGNVVRSKKPIYWCCSCQTALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SI+  F +  A    + +LN       + +WTTTPWT+P N AVAV+    
Sbjct: 201 EYYD-HTSPSIFVRFPLRDA--RVADVLNVDPASAYIVIWTTTPWTLPDNMAVAVHPDHD 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           YAVV                                ++A+ LV +    +G     I  T
Sbjct: 258 YAVVR-------------------------HDGAHYVLAAALVESSAKTFGWEGFEIVGT 292

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           +AG+ LE     HP  +R  PVV+  DY+T +SGTG VHTAPGHG+EDY T L+YGL IL
Sbjct: 293 VAGAKLEGLAATHPFYDRPSPVVLA-DYVTLDSGTGCVHTAPGHGREDYETGLRYGLEIL 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
           SP++DEG+F +    F+GL V  + N  V++ + E  +L+ E    H YP+ WR KKP I
Sbjct: 352 SPMNDEGRFLDSVPFFAGLTVF-EANPKVIEKMREVGNLLAERKLSHSYPHCWRCKKPVI 410

Query: 303 FRATEQWFASVEG--FRQAAMDAI-GQVKWVP 331
           FRAT QWF ++E    R  A+ AI   V+W+P
Sbjct: 411 FRATTQWFIAMEKNELRARALSAIRNDVRWIP 442



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 23/355 (6%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 371
           V+G  +    +IG V  + PQE    YGA++LRLWV+SVDY  D+ I  ++L ++ D YR
Sbjct: 600 VDGEGRKMSKSIGNV--IAPQEIIDKYGAEILRLWVASVDYREDIRISDEILSRLVDAYR 657

Query: 372 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           ++R T RYLLGN+ D      + +  +  +D+YAL  + +    I+E+Y  ++F K+F  
Sbjct: 658 RIRNTCRYLLGNIDDLTPEEIVPFSVMDPLDRYALDIVTDAHARIQEAYSEFEFHKVFHT 717

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +    + DLS FY DV KDRLY     S  RRS QT L   LL +VR +AP+L   AE+V
Sbjct: 718 LHNLCVTDLSAFYLDVLKDRLYASAKDSPERRSAQTALLHILLVLVRDMAPVLSFTAEEV 777

Query: 492 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVAR 551
           ++++P A       AA  VF  +    D         E   W  +L +R+EV K +E  R
Sbjct: 778 FRHIPEALR----PAAPTVFALRGS--DTPLYNVSSDESERWEAVLAVRSEVTKAIEPLR 831

Query: 552 TGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIR 611
               +G SL+  V L+ DD  LA+ LR   T       L+ +FI+S++ + P      + 
Sbjct: 832 KAGTVGHSLDTHVTLYADD-KLAALLRATGT------DLRAVFIVSKLNIAP------LE 878

Query: 612 NIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + P    +  E    + IGV++A G+KCERCW Y   +G+    P  C+RC  VL
Sbjct: 879 DAPQDA-FASEEVKGLRIGVAKAPGAKCERCWVYHEDLGADPNFPGACARCTTVL 932


>gi|254782434|sp|B8CSC1.1|SYI_SHEPW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|212557957|gb|ACJ30411.1| Isoleucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 940

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 192/333 (57%), Gaps = 30/333 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV+ADW NPYLT+D   EA  +    ++   G++++G KPVHW     +ALAEAE+
Sbjct: 141 FIRLGVFADWQNPYLTMDYNTEANIVRSLSKVIDSGHLHKGVKPVHWCTDCGSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           EY E  +S +I   F  V  P   +   L E+   + + +WTTTPWT+PAN A++V  +L
Sbjct: 201 EY-EDKMSPAIDVAFTAVDKPALLAKFGLTEYAHPISMVIWTTTPWTLPANRALSVAGQL 259

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG--TKLVIK 180
           +Y +VE+                     +KD +   +++A +LV +   ++G  T  V+ 
Sbjct: 260 EYTLVEM---------------------VKDGQTQALVLAQELVESCVERFGAETHKVLA 298

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
             L GS+LE  R+ HP  +   PV++G +++T ESGTG+VHTAPGHGQ+D+V   KYGL 
Sbjct: 299 NVL-GSELELLRFNHPFYDFDVPVILG-EHVTVESGTGVVHTAPGHGQDDFVVGQKYGLE 356

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           + +PV D G +  +   F+G  V    N AVV  L+E+ +L+      H YP+ WR K P
Sbjct: 357 VANPVGDNGVYKADTEIFAGQHVF-KANKAVVALLEEKGALLNHVAINHSYPHCWRHKTP 415

Query: 301 TIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            IFRAT QWF S++  G R  A+  I + +W+P
Sbjct: 416 IIFRATPQWFISMDQKGLRTQALSEIEKTQWIP 448



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 198/361 (54%), Gaps = 42/361 (11%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  ++L++ +D Y
Sbjct: 598 TVDGKGRKMSKSVGNV--IAPQHVTNKLGADILRLWVAATDYSGEMTVSDEILKRSADAY 655

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R++R T R+LL N++ +    + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFNPETDMVAVEDMVALDRWVVRRAAALQQELLEAYDQYNFHLVT 715

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAP+L   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKDDSNARRSCQSALYLISEAMVRWIAPVLSFTAD 775

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKW------PVLDEKWRTFPVGEIYFWGKILELRTEV 543
           ++W+ LP       G   EFVF   W        LD            FW ++L +R EV
Sbjct: 776 EIWKLLP-------GERGEFVFTETWYEGLQSVTLDSDLSD------EFWEQLLTVRAEV 822

Query: 544 NKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV-- 601
           NKV+E AR  K IG SLEA++ LF D+A L++ L  +       D L+ + + S+ +V  
Sbjct: 823 NKVIENARREKQIGGSLEAEIMLFADEA-LSTALSTL------GDELRFVLLTSKTDVVA 875

Query: 602 LPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSR 661
           L   P   I     S          + +G+ ++E  KCERCW++  +VG   EHPTLC+R
Sbjct: 876 LSEAPADAIETELAS----------LKLGLKKSEAEKCERCWHHREEVGQVAEHPTLCTR 925

Query: 662 C 662
           C
Sbjct: 926 C 926


>gi|225620247|ref|YP_002721504.1| isoleucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782370|sp|C0R112.1|SYI_BRAHW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|225215066|gb|ACN83800.1| isoleucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 923

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 125/332 (37%), Positives = 176/332 (53%), Gaps = 36/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLT+ PEYE+  +EVF Q+  +GYIY+G + +HW     TALA AE+
Sbjct: 140 FKRLGVMGDWENPYLTMSPEYESEIVEVFAQLVEKGYIYKGLRTIHWCMDCETALAAAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S S+Y  F      P  + + ++   ++ + +WTTTPWT+P+N A A N  L+
Sbjct: 200 EYDDNHTSTSVYVRF------PVLNKINDKLDGNVDVMIWTTTPWTLPSNMACAFNRDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  VEI                            + I+ + LV T+ +K   K   +  +
Sbjct: 254 YVAVEIDGR-------------------------YAIMTTSLVDTVLSKKDMKAEGRDMI 288

Query: 184 AGS--DLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             S  D+E     HP    +   V+  DY+   +GTG+VHTAPGHG EDY T + YGL I
Sbjct: 289 PVSMEDIEKLEIAHPFIKDRKSAVVFADYVEATAGTGIVHTAPGHGMEDYQTGMNYGLEI 348

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             PVD  G++T +  +  G+ V  D N  VV+ L+   SL  +E   H YP  WR K P 
Sbjct: 349 YCPVDKAGRYTSDFPEMQGMKVR-DANPKVVEILENNGSLYHKEKVTHSYPICWRCKNPL 407

Query: 302 IFRATEQWFASV--EGFRQAAMDAIGQVKWVP 331
           IFRAT QWF ++  +   +  + A+  +KW P
Sbjct: 408 IFRATSQWFMNMTHDDIDKRTVKALDNIKWYP 439



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 183/363 (50%), Gaps = 33/363 (9%)

Query: 306 TEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLR 364
           T  W    +G  +A   + G V  V P E    YGAD+LRLW  S D+T +  +G  +++
Sbjct: 591 THGWTLDEQG--RAMHKSAGNV--VSPLEVIDKYGADILRLWCISEDFTHNARVGDNMMK 646

Query: 365 QMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESY 423
            ++D YRK+R T RYLLGN+ D+      I   DL  +D+YAL +L + +K   ++ + Y
Sbjct: 647 AIADNYRKIRNTFRYLLGNISDFDFTKEKIEVKDLLPVDRYALSRLHSFIKVAEKACDGY 706

Query: 424 QFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPI 483
           +F   +Q +  + +V+LS  YFD+ KDRLY     S +RRS QTVL   L  +V++IAP+
Sbjct: 707 EFHLFYQRLINYCVVELSATYFDIIKDRLYCDRKDSVSRRSAQTVLVEILDVLVKLIAPV 766

Query: 484 LPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEV 543
           LP   ++VW      Y  E+ S+        +P  D+      + +   W  IL++R +V
Sbjct: 767 LPFTTDEVWG----YYKGENASSVHLEL---YPKADDNLIDLELEK--EWTSILKVRDDV 817

Query: 544 NKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLP 603
              LE AR    IG SLEA V + T + +    L +          L  IFI+S+V +  
Sbjct: 818 LLSLERARDNSTIGKSLEAYVTICTKEPATKELLTKY------EKYLNEIFIVSKVTLSD 871

Query: 604 STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY 663
           S  +  I           EG    ++   +A   KC RCW +   VG+  EH  LC+RC 
Sbjct: 872 SKDDTFI-----------EGG-VSFVKTEKASHEKCVRCWGHYDSVGTDSEHKELCTRCA 919

Query: 664 EVL 666
           E +
Sbjct: 920 EAV 922


>gi|320354487|ref|YP_004195826.1| isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122989|gb|ADW18535.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 935

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 183/335 (54%), Gaps = 41/335 (12%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPYLT+   YEA     F +  L G + R KKPV+W  +  TALAEAE+
Sbjct: 140 FKRLGVLGDWSNPYLTMSFPYEAIIAREFNKFLLSGAVVRSKKPVYWCATCGTALAEAEV 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----LAVWTTTPWTVPANAAVAV 118
           +Y + H S S+Y  F +V         L E  P L      + +WTTTPWT+PAN A+A 
Sbjct: 200 DYAD-HTSPSVYVKFPVVDD-------LGEVAPQLAGRSVSVLIWTTTPWTLPANLAIAF 251

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +   +YA V +     GD                   + +I+    + P +E     +  
Sbjct: 252 HPDFEYAAVAV-----GD-------------------ETWILAKELVAPCMEQFGIDQYA 287

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
              T + S LEN R  HP   R   +V+  DY+T +SGTG VHTAPGHG +DY+T L+YG
Sbjct: 288 SIATFSASSLENKRCRHPFMERDALLVLA-DYVTADSGTGCVHTAPGHGTDDYLTGLRYG 346

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           L ILSPVDD G++T EAG+++G  V    N  ++  +    SL+ E    H YP+ WR K
Sbjct: 347 LDILSPVDDAGRYTAEAGRYAGQPV-PQVNSQIIADMAAAGSLVKEASIRHSYPHCWRCK 405

Query: 299 KPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 331
           +P I+RAT QWF S++    R  A+ AI +V+W P
Sbjct: 406 EPVIYRATAQWFISMDNLQLRAKALSAINEVQWTP 440



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 191/363 (52%), Gaps = 36/363 (9%)

Query: 313 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 372
           V+G  +    ++G V   P Q    YGA+VLRLWV+S +Y  DV +  ++L+ +SD YRK
Sbjct: 595 VDGQGKKMSKSVGNVV-APQQVIDQYGAEVLRLWVASENYQDDVKVSDEILKHVSDAYRK 653

Query: 373 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 431
           +R TLR+LL NL+D+    +++   DL  ID++AL +   + + +  +Y+ Y+F  I+  
Sbjct: 654 MRNTLRFLLSNLYDFAPERDAVDVSDLQEIDRWALAKYAELSERVTRAYDRYEFHAIYHA 713

Query: 432 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 491
           +  F    +S+ Y DV KDRLY        RR+ QTV+   L  ++R+++PIL   A + 
Sbjct: 714 LHNFCGTTISSIYMDVLKDRLYCSAPAGPERRAAQTVIYRILDGLLRLMSPILCFTAAEA 773

Query: 492 WQNLPFAYTLEDGSAAE-FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVA 550
           W++L   + L D +  E  +F +++  +D+  +     E   W K+L LR  + +VLE A
Sbjct: 774 WEHL---HGLSDNTPLEQSIFFTRFAPVDDIGKDTAFEE--RWTKLLTLRGAITRVLEGA 828

Query: 551 RTGKLIGSSLEAKVYLFTD-------DASLASRLREMCTAKHDADTLQRIFIISQVEVLP 603
           R  K+IG  L+A+V L  +       + SL  +LRE+C             I+S +    
Sbjct: 829 RRDKVIGLGLDAEVVLRGNTEWAGFLNGSL-DQLRELC-------------IVSSLRSAQ 874

Query: 604 STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY 663
               G             EG   + I V  A G+KCERCW  +T VG   EHP+LC+RC 
Sbjct: 875 PGEGGF-------AFVEAEGIPGLEIAVHPAPGAKCERCWTIATSVGEDHEHPSLCARCA 927

Query: 664 EVL 666
            V+
Sbjct: 928 AVV 930


>gi|422858978|ref|ZP_16905628.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
 gi|327458758|gb|EGF05106.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 930

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 193/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL  +YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G T + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWTDVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +   VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYHVGVANGLEVA 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     VV  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFEGQFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I ++K+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIDKIKF 432



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 179/341 (52%), Gaps = 36/341 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V
Sbjct: 606 PSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPV 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++Y++L  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ VDLS FY D AK
Sbjct: 666 EDAVAYEELRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  R   QTV    L+ I +++ PILPH AE++W  L       +    EF
Sbjct: 726 DVVYIEAAKSLERCQMQTVFYDILVKITKLLTPILPHTAEEIWSYL-------EHEKEEF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKD 625
            ++      ++ +  A  ++D  Q + I+SQ+ +   P+    L+              +
Sbjct: 835 PNEV-----IKTLLEAV-NSDVAQ-LLIVSQLTIAEGPAPEGALVF-------------E 874

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            V   V  A+G  C+RC    T V        +C  C E+L
Sbjct: 875 DVAFVVEHAQGQVCDRCRRIDTTVKERSYQALVCDHCAEIL 915


>gi|387813165|ref|YP_005428646.1| isoleucine tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
           49840]
 gi|381338176|emb|CCG94223.1| isoleucine tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
           49840]
          Length = 939

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/335 (39%), Positives = 200/335 (59%), Gaps = 30/335 (8%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
           A F R GV  +W+ PYLT+DP+ EA  +   G++  +G++ RG KPV+WS   ++ALAEA
Sbjct: 139 ADFIRLGVMGEWDKPYLTMDPKVEAGIVRALGKIVAKGHLVRGFKPVYWSVVGQSALAEA 198

Query: 62  ELEYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 119
           E+EY +   S  I   F +V   A   T G  +E   D+ L +WTTTPWT+PAN AV++ 
Sbjct: 199 EVEYQD-KTSTQIDVRFTVVDQDAVLKTFG-TSEGEGDVSLVIWTTTPWTIPANQAVSIG 256

Query: 120 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LV 178
           A ++YA+V++      D    A +               +I+A+D+V  + A+WG +   
Sbjct: 257 ADIEYALVQL------DVGHGAER---------------MILATDMVQGIMARWGVEDYK 295

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 238
           +   ++GS LEN    HPV ++Q PV++ GD+++ ++GTG VHTAP HG ED+V   +YG
Sbjct: 296 VLANVSGSALENQLLQHPVYDKQVPVLL-GDHVSLDAGTGAVHTAPDHGMEDFVVGKEYG 354

Query: 239 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 298
           +  L+ V  +G +T+ AG+F+G+ V    +  V   L+ +  L+  E + H YP+ WRTK
Sbjct: 355 IGTLNLVKADGTYTDAAGEFAGVHVY-KADEPVCAALEREGKLVRSEKFRHSYPHCWRTK 413

Query: 299 KPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            P I+RAT QWF S++    R  A++AI  V+WVP
Sbjct: 414 TPLIYRATPQWFISMDKLNLRADALEAIKGVRWVP 448



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 330 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + PQE     GAD+LRLWVS+ DY+G++ +   +LRQ +D YR++R T R+LL NL  + 
Sbjct: 614 IAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFD 673

Query: 389 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + ++ +D+  +D++ + +   +   + E Y +Y F +I+Q +  F    L  FY D+
Sbjct: 674 PDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDI 733

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDR YT    S  RRSCQT L     ++VR IAPIL   A+++WQ+LP       G   
Sbjct: 734 IKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADEIWQHLP-------GKRG 786

Query: 508 EFVFESKW-PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           + VF   W   L      F +G  Y W +I  ++  VNK LE  R    I  SL A+V L
Sbjct: 787 DTVFYETWYEGLSALPEGFELGRDY-WREIYAVKEAVNKCLEEVRARGEIKGSLSAEVTL 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  + SLA RL  +       + L+ + I S+  V P +    +      G         
Sbjct: 846 YC-EGSLAERLNYL------GEELRFVLITSEATVRPVSEAAGVEQTNLEG--------- 889

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           + + V+ A  +KCERCW++   VG   ++  LC RC
Sbjct: 890 LLVKVTPATHAKCERCWHHREDVGQNEQYSDLCGRC 925


>gi|312864585|ref|ZP_07724816.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
 gi|311099712|gb|EFQ57925.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
          Length = 935

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/331 (43%), Positives = 192/331 (58%), Gaps = 38/331 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV ADW NPY+TL  +YEAAQI VFG M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 143 FKRLGVSADWENPYVTLTHDYEAAQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEI 202

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY    VS S+Y   ++       S L N    D  + VWTTTP+T+ A+  + V A   
Sbjct: 203 EY-HNLVSTSLYYANKV---KDGKSILDN----DTYIVVWTTTPFTITASRGLTVGADFS 254

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y  V++     GD                D+K    +VA +L+  L  ++G +   + + 
Sbjct: 255 YVSVQVA----GD----------------DRK---FVVAEELLDDLAGRFGWSDFKVLER 291

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
            +GS LE     HP D++   VV+ GD++T +SGTG+VHTAPG G++DY  SLKYGL I 
Sbjct: 292 YSGSQLEYITTEHPWDSQVEEVVMVGDHVTLDSGTGIVHTAPGFGEDDYNVSLKYGLEIS 351

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             VD  G  TEEAG     D  G     V+  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 352 VTVDSRGIMTEEAGP----DFQGQFYDKVLPTVLEKLGNLLLAKEEITHSYPFDWRTKKP 407

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
            I+RA  QWFASV  FRQ  +D I +V + P
Sbjct: 408 IIWRAVPQWFASVSKFRQEILDEIEKVDFFP 438



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 178/339 (52%), Gaps = 33/339 (9%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P   A  YGA++LRLWV+SVD   DV +  ++L Q+S+ YRK+R TLR+LL N  D++  
Sbjct: 610 PNDVAKQYGAEILRLWVASVDTDNDVRVSMEILGQVSESYRKIRNTLRFLLANTSDFKKE 669

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            +++Y+DL  +DQY + +   +V  I ++YE+Y+F  +++ +  F+ VDLS FY D AKD
Sbjct: 670 QAVAYEDLRSVDQYMMVKFNQLVATITKAYENYRFMDVYKAVNNFLTVDLSAFYLDFAKD 729

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            +Y     +  RR  QTV    L+ I +++ PILPH +E++W        LED  A EFV
Sbjct: 730 VVYIEAADNLARRQMQTVFYDILVKITKLLTPILPHTSEEIWS------YLED-EAEEFV 782

Query: 511 FESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
             ++ P    + R+F   +  +  W   +  RT+  K LE AR  KLIG SLEA + ++ 
Sbjct: 783 QLAEMP----QARSFANQDSLLEAWDAFMTFRTQAQKALEEARNAKLIGKSLEAHLTVYA 838

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEV-LPSTPNGLIRNIPYSGEYLVEGKDKV 627
               +A+ L  + +       L ++ I+S++ +     P   +R          EG   V
Sbjct: 839 -SPEVAADLAALNS------DLAQLLIVSELTISQEEAPADALR---------FEG---V 879

Query: 628 WIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
              V  A G  C+RC      V       T+C  C +++
Sbjct: 880 AFKVEHAAGQVCDRCRRTDVTVKERSYGVTICDHCADIV 918


>gi|345862715|ref|ZP_08814929.1| isoleucine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
           Tica)]
 gi|345126057|gb|EGW55923.1| isoleucine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
           Tica)]
          Length = 940

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 191/338 (56%), Gaps = 35/338 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLT+D  +EA  +   G++  QG++++G KPVHW     +ALAEAE
Sbjct: 140 DFKRLGVLGEWDNPYLTMDHRFEADIVRSLGRIVEQGHVHKGSKPVHWCTDCGSALAEAE 199

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LGLAVWTTTPWTVPANAAV 116
           +EY +   S +I   FR++  P          +PD      + + +WTTTPWT+PAN AV
Sbjct: 200 VEY-QNKDSFAIDVRFRVLEEPALFDRC--HHVPDGLGEGPINMVIWTTTPWTLPANQAV 256

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT- 175
           A+N  L+YAVV+    L        N++              +++A  ++  +  ++G  
Sbjct: 257 ALNPSLEYAVVQCDGPL-------GNER--------------MVIADAMLKDVMDRYGIE 295

Query: 176 KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           K  +     G   E  +  HP  +RQ PV++ G+++T E+GTG VHTAPGHG +DYV   
Sbjct: 296 KYHVLGYAKGEAFEGLKLQHPFYDRQVPVIL-GEHVTLEAGTGAVHTAPGHGLDDYVVGQ 354

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +YGLP+ +PV + G F E    F+G  V    N  V++ L  + +L+ EE   H YP+ W
Sbjct: 355 RYGLPVDNPVGNNGCFVEGTELFAGQHVFS-ANEKVIEVLKARGALVREERLNHSYPHCW 413

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           R K P IFRAT QWF S++  G R +AM  I QV+W+P
Sbjct: 414 RHKTPIIFRATPQWFISMDQAGLRASAMREIEQVEWLP 451



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 179/341 (52%), Gaps = 35/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
            P +     GAD++RLWV++ DY  ++ +  ++L++ +D YR++R T R+LL NL+ +  
Sbjct: 617 APQKVTKNLGADIIRLWVAATDYRNEMSVSDEILKRTADAYRRIRNTTRFLLSNLNGFDP 676

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++  ++  +D++A+ +   + + I ++Y+ YQF  I+Q I  F + +L  FY DV 
Sbjct: 677 AQHMVAAGEMIELDRWAVDRTLQLQQEIADAYKGYQFHLIYQKILNFCVTELGGFYLDVI 736

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDR YT    S  RRSCQT +   + ++VR +APIL   A++VW ++P       G   E
Sbjct: 737 KDRQYTTQADSLPRRSCQTAMYHIVEAMVRWLAPILSFTADEVWAHMP-------GERGE 789

Query: 509 FVFESKWPVLDEKWRTFPVGEIY---FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            VF   W    E       G+ +   FWG+++  R  V K LE  R      +SL+A++ 
Sbjct: 790 SVFLEGWY---EGLFALDAGDSFDRAFWGQVIAARNAVGKALEPFRADG--NASLDAEID 844

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+ DD  L + L ++       D L+ + I S  +V  +   P+        +    +EG
Sbjct: 845 LYCDD-QLKAALDKL------GDELRFVLITSDARVHAMADLPDD-------AASSELEG 890

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
              + + V+ +   KC RCW++   VG+  EHP LC RC E
Sbjct: 891 ---LAVRVTASAYGKCPRCWHHREDVGANSEHPELCGRCVE 928


>gi|407794766|ref|ZP_11141788.1| isoleucyl-tRNA synthetase [Idiomarina xiamenensis 10-D-4]
 gi|407210961|gb|EKE80833.1| isoleucyl-tRNA synthetase [Idiomarina xiamenensis 10-D-4]
          Length = 947

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/343 (38%), Positives = 192/343 (55%), Gaps = 41/343 (11%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV   W+ PYLT++ + EA  I    ++   G++ +G KPVHW     +ALAEAE
Sbjct: 140 DFKRLGVLGAWDTPYLTMNFKQEADSIRALAKIIDNGHLQQGFKPVHWCTDCGSALAEAE 199

Query: 63  LEYPEGHVS-----------RSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVP 111
           +EY +   +             + A F+     P            L +A+WTTTPWT+P
Sbjct: 200 VEYQDKTSAAIDVRLPVMSETDVVARFQHPQGHPGNG--------PLSVAIWTTTPWTMP 251

Query: 112 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 171
           AN AV + A L+YA+V+I++  E                 K+++   +I+ASDLV  +  
Sbjct: 252 ANRAVTLAAGLEYALVQIEADAE-----------------KERQAERLIIASDLVADVMQ 294

Query: 172 KWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 230
           ++      K     G DLE  +  HP+ + Q P+++G D++TTESGTG VHTAPGHG +D
Sbjct: 295 RYDIDHYHKLGFCQGKDLEGVQLQHPLYDLQVPMILG-DHVTTESGTGCVHTAPGHGVDD 353

Query: 231 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
           ++   KYG+ + +PV D G + ++   F+G+ VL   N A+++ L EQ +L+  E Y+H 
Sbjct: 354 FLVGQKYGIEVYNPVGDNGVYKDDTPLFAGMHVL-KANDAIIEQLREQGNLLHHEAYQHS 412

Query: 291 YPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 331
           YP+ WR K P IFRAT QWF S+  EG RQ A+  I  V+WVP
Sbjct: 413 YPHCWRHKTPIIFRATPQWFISMEKEGLRQQALTQIDAVQWVP 455



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 189/353 (53%), Gaps = 26/353 (7%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G V  + PQ+     GAD+LRLWV+S DY+ ++ +  ++L++ +D Y
Sbjct: 605 TVDGQGRKMSKSLGNV--MSPQDVMNKLGADILRLWVASTDYSAEMTVSDEILKRSADAY 662

Query: 371 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R++R T R+LL NL+ +    +++   D+  +D++ + +  ++   +  +Y+SYQF ++ 
Sbjct: 663 RRIRNTARFLLANLNGFEPQQHALKQADMVELDRWIVGRAADLQAELLAAYDSYQFHQVV 722

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           Q +  F  ++L +FY D+ KDR YT       RRSCQT L     ++VR +API+   AE
Sbjct: 723 QKLMHFCSIELGSFYLDIIKDRQYTAKRDGNARRSCQTALYHIAEALVRWMAPIMSFTAE 782

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEV 549
           ++WQ LP       G   +F     W     ++      E  +W ++L +R +VN+ LE 
Sbjct: 783 EIWQALP-------GQRGKFAQADSWYQGFNEFAGVADSENRYWTELLAVRDQVNRALEQ 835

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
           AR   +IG SL+A++ L+     LA +L+ +       D L+ + + S   V        
Sbjct: 836 ARRDDVIGGSLQAELTLYA-QPELADKLQRL------DDELRFVMLTSAAHV------SA 882

Query: 610 IRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           +   P   E +      +W+ V R E +KCERCW++  +VG   EHP LC RC
Sbjct: 883 VDKAP--AEAVATDITGLWLQVKRTEYAKCERCWHHREEVGQIAEHPQLCQRC 933


>gi|345876494|ref|ZP_08828262.1| riboflavin biosynthesis protein ribF [endosymbiont of Riftia
           pachyptila (vent Ph05)]
 gi|344226461|gb|EGV52796.1| riboflavin biosynthesis protein ribF [endosymbiont of Riftia
           pachyptila (vent Ph05)]
          Length = 940

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 191/338 (56%), Gaps = 35/338 (10%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            FKR GV  +W+NPYLT+D  +EA  +   G++  QG++++G KPVHW     +ALAEAE
Sbjct: 140 DFKRLGVLGEWDNPYLTMDHRFEADIVRSLGRIVEQGHVHKGSKPVHWCTDCGSALAEAE 199

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LGLAVWTTTPWTVPANAAV 116
           +EY +   S +I   FR++  P          +PD      + + +WTTTPWT+PAN AV
Sbjct: 200 VEY-QNKDSFAIDVRFRVLEEPALFDRC--HHVPDGLGEGPINMVIWTTTPWTLPANQAV 256

Query: 117 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT- 175
           A+N  L+YAVV+    L        N++              +++A  ++  +  ++G  
Sbjct: 257 ALNPSLEYAVVQCDGPL-------GNER--------------MVIADAMLKDVMDRYGIE 295

Query: 176 KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
           K  +     G   E  +  HP  +RQ PV++ G+++T E+GTG VHTAPGHG +DYV   
Sbjct: 296 KYHVLGYAKGEAFEGLKLQHPFYDRQVPVIL-GEHVTLEAGTGAVHTAPGHGLDDYVVGQ 354

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDW 295
           +YGLP+ +PV + G F E    F+G  V    N  V++ L  + +L+ EE   H YP+ W
Sbjct: 355 RYGLPVDNPVGNNGCFVEGTELFAGQHVFS-ANEKVIEVLKARGALVREERLNHSYPHCW 413

Query: 296 RTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
           R K P IFRAT QWF S++  G R +AM  I QV+W+P
Sbjct: 414 RHKTPIIFRATPQWFISMDQAGLRASAMREIEQVEWLP 451



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 35/341 (10%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
            P +     GAD++RLWV++ DY  ++ +  ++L++ +D YR++R T R+LL NL+ +  
Sbjct: 617 APQKVTKNLGADIIRLWVAATDYRNEMSVSDEILKRTADAYRRIRNTTRFLLSNLNGFDP 676

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             + ++  ++  +D++A+ +   + + I ++Y+ YQF  I+Q I  F + +L  FY DV 
Sbjct: 677 AQHMVAAGEMIELDRWAVDRTLQLQQEIADAYKGYQFHLIYQKILNFCVTELGGFYLDVI 736

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDR YT    S  RRSCQT +   + ++VR +APIL   A++VW ++P       G   E
Sbjct: 737 KDRQYTTQADSLPRRSCQTAMYHIVEAMVRWLAPILSFTADEVWAHMP-------GERGE 789

Query: 509 FVFESKWPVLDEKWRTFPVGEIY---FWGKILELRTEVNKVLEVARTGKLIGSSLEAKVY 565
            VF   W    E       G+ +   FWG+++  R  V K LE  R      +SL+A++ 
Sbjct: 790 SVFLEGWY---EGLFALDAGDSFDRAFWGQVIAARNAVGKALEPFRADG--NASLDAEID 844

Query: 566 LFTDDASLASRLREMCTAKHDADTLQRIFIIS--QVEVLPSTPNGLIRNIPYSGEYLVEG 623
           L+ DD  L   L ++       D L+ + I S  +V  +   P+        +    +EG
Sbjct: 845 LYCDD-QLKVALDKL------GDELRFVLITSDARVHAMADLPDD-------AASSELEG 890

Query: 624 KDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYE 664
              + + V+ +   KC RCW++   VG+  EHP LC RC E
Sbjct: 891 ---LAVRVTASAYGKCPRCWHHREDVGANSEHPELCGRCVE 928


>gi|224541716|ref|ZP_03682255.1| hypothetical protein CATMIT_00888 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525320|gb|EEF94425.1| isoleucine--tRNA ligase [Catenibacterium mitsuokai DSM 15897]
          Length = 911

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 184/331 (55%), Gaps = 33/331 (9%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M    R G +AD+ +PYLTL  E+EA QI+VF +M++ G IY+G KPV+WSPSS +ALAE
Sbjct: 128 MQQCIRVGTFADYKHPYLTLHKEFEARQIDVFAKMAVDGLIYKGLKPVYWSPSSESALAE 187

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   S +IY  F++        G  N F+      +WTTTPWT+P N A+ +N 
Sbjct: 188 AEVEYHDVK-SPTIYVRFKVKDGKGILEGDDNYFV------IWTTTPWTIPGNQAICLNP 240

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           +  YA+V                KS  GN         ++V  +LV +L   +G K   I
Sbjct: 241 RFTYALV----------------KSEKGN---------LVVLEELVDSLWETFGLKEKEI 275

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            K   G +LE     HP+   +  +VI GD++TT+SGTG VHTA G G +D+    KY L
Sbjct: 276 LKRFKGEELEYITCTHPLYPERESLVIMGDHVTTDSGTGCVHTASGFGVDDFNICQKYKL 335

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           P+L  VD+ G   E  G++     + D N  V   L+E  +L+      H YP+DWRTKK
Sbjct: 336 PVLVNVDEHGCMMESCGEWLAGQYVDDANKTVTVKLEELGALLNLTWITHSYPHDWRTKK 395

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWV 330
           P IFRAT+QWF S++  R+  +  I  V W+
Sbjct: 396 PIIFRATDQWFCSIDKIREKLLSEIDSVNWI 426



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 178/346 (51%), Gaps = 43/346 (12%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           P +    +GAD+LRLW ++VD+  DV I   +L+++S+ YRK+R T+R+LLGNL+D++  
Sbjct: 598 PIKTINKWGADILRLWATTVDFQSDVRISDDILKKVSESYRKVRNTMRFLLGNLNDFKDT 657

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
           + +  + L  +DQY L +L +++    +S +SY F +  + I  +    LS FY D  KD
Sbjct: 658 DVLPVNQLEPVDQYMLAKLNDLMDAYHKSMDSYNFSEANKEILNYFTNTLSAFYMDFTKD 717

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
            LY     S  RR  QTVL  H  +++++I+PIL   AE++  +        D    E V
Sbjct: 718 ILYIEKADSTRRRQVQTVLYHHAKTMMKLISPILVFTAEELHDHFHC-----DAKQEESV 772

Query: 511 FESKWPVLDEKWRTFPVGEIYF-WGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTD 569
           F    P   EK+       +   +   + LRT+V K LE  R  K+I S++E K+ +   
Sbjct: 773 FLEAKP---EKFEIENEDALKAQFDLFMNLRTDVMKSLENLRAEKVINSNMEGKLTITLK 829

Query: 570 D--ASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK- 626
           D   SLA+            D+++++FI+++V +  +                 EGKD+ 
Sbjct: 830 DEYKSLAAL----------EDSMKQLFIVTKVTLDDN----------------AEGKDEY 863

Query: 627 --VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP 670
              +I   +  G +C RCWN+  + G  V+   LC RC+EV+   P
Sbjct: 864 ETCFIKAEKFHGVQCPRCWNWFEE-GELVD--GLCPRCHEVVETLP 906


>gi|218779617|ref|YP_002430935.1| isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761001|gb|ACL03467.1| Isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 932

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 190/337 (56%), Gaps = 40/337 (11%)

Query: 2   ASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEA 61
             FKR GVW +WNNPYLT++ +YEA  +   G+ +  G ++RGKKPV+W    +TALAEA
Sbjct: 138 GEFKRLGVWGEWNNPYLTMNYKYEADIMRECGKFADNGALFRGKKPVYWCNRCQTALAEA 197

Query: 62  ELEYPEGHVSRSIYAVF----RMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVA 117
           E+EY E   S SI+  F        A P  +G        + + +WTTTPWT+P N A+ 
Sbjct: 198 EVEY-EDEKSPSIFVKFAADDDFAQAIPELAG------KKVFVVIWTTTPWTLPGNLAIC 250

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK- 176
           ++   +Y+ VE+     GD                      +I+ASDLV +    +G + 
Sbjct: 251 LHPDFEYSAVEVN----GDEV--------------------LILASDLVESNMKDFGIED 286

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             +  T A S LE     HP  +R+  +V+ G+++T E+GTG VHTAPGHG+EDY   L 
Sbjct: 287 YKVLATFASSVLERKTCRHPFYDRESLMVL-GNHVTLEAGTGCVHTAPGHGREDYEVGLA 345

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           YGL   SPV+D+G F ++   F+G  V    N  V+  L E  +LI+ +  EH YP+ WR
Sbjct: 346 YGLEPYSPVNDKGCFEDDVEFFAGQFVF-KANENVIAKLKENNALILSKGLEHSYPHCWR 404

Query: 297 TKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            K+  IFRAT QWF S++  G R+AA+  I QVKWVP
Sbjct: 405 CKQSVIFRATPQWFISMDKTGLRKAALTEIDQVKWVP 441



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 188/339 (55%), Gaps = 29/339 (8%)

Query: 335 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 388
           APG     +GA++LRLWVS+ DY  D+ I  ++L+Q+SD YR++R T R++LGNL D+  
Sbjct: 613 APGKVIKSHGAEILRLWVSAADYRDDIRISDEILKQLSDAYRRIRNTCRFILGNLGDFDP 672

Query: 389 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             +++  D +  ID+YA+ +L+ +++  + +Y+ ++F  I+  +  F  VDLS FY D+ 
Sbjct: 673 QKDAVEQDMMLEIDRYAMHKLQGLIRRCKAAYDEFEFHVIYHALHNFCSVDLSAFYLDIL 732

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KDRLY     S  RRS QTVL   + +IV+++AP+L   AE+V++ +P     +     E
Sbjct: 733 KDRLYVSPPGSHARRSAQTVLYKLIDAIVKLMAPVLSFTAEEVYEYMPQVEGKKQSVHLE 792

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
                 +P +D  W+   +     W  I ++R EV K LE AR  K++G  L+A V L+ 
Sbjct: 793 L-----FPDVDPDWQNEKLAAQ--WELIRKVRGEVTKALEEARAAKVVGHPLDASVTLYV 845

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           D+       + +   +H+   L+R+FI+S+V +        +    +  E L  G     
Sbjct: 846 DE----DLFKSLSAYEHE---LRRLFIVSEVVLTKDAAPEEV----FKSETLALG----- 889

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           +    A G KC+RCW Y T VG   E PT+C RC + LA
Sbjct: 890 VSAKAAPGEKCQRCWVYDTTVGDDAEQPTVCLRCRDALA 928


>gi|290991765|ref|XP_002678505.1| predicted protein [Naegleria gruberi]
 gi|284092118|gb|EFC45761.1| predicted protein [Naegleria gruberi]
          Length = 1020

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 137/372 (36%), Positives = 205/372 (55%), Gaps = 54/372 (14%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           +  FKR+GV  +W+NPY T++P +EA Q+ +F  M  + YI+RGKKPV+WSPSS TALAE
Sbjct: 196 LNDFKRWGVMGEWDNPYKTMNPTFEAQQLRIFLDMLNKKYIFRGKKPVYWSPSSGTALAE 255

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           +ELEYP+ H+S+S Y +F + ++    S    E        VWTTTPWT+ AN A++ N 
Sbjct: 256 SELEYPDVHISKSCYVLFPITTSNTEMSQKYGELFA----TVWTTTPWTLIANEAISYNQ 311

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
            ++Y++                       +   +K   +I+AS+L+ ++  K G K   +
Sbjct: 312 DIEYSI-----------------------IYDSEKHRRLIIASELMKSVCEKTGIKNFTV 348

Query: 180 KKTLAGSDL----------ENCRYVHP----VDNRQCPVVIGGDYITTESGTGLVHTAPG 225
            + + G DL          +   YV+P    V +++ P  + G ++TTE GTGLVHTAP 
Sbjct: 349 LQAMKGKDLFVNNDILMGDKVSSYVNPLTSSVTDKKLP-FLNGSHVTTEVGTGLVHTAPN 407

Query: 226 HGQEDYVTSLKYGLPILSP--VDDEGKFTEEA--GKFSGLDVLGDGNVAVVKYLDEQMS- 280
           HG ED+       LPI  P  VD+ GK+  +       GL VL  GN  VV+ L   +S 
Sbjct: 408 HGIEDFQVVKDNSLPI-GPCFVDEYGKYNSQTPLPHLIGLPVLSVGNEKVVEMLQGDLSQ 466

Query: 281 -LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYG 339
            L+++E Y H+YPYDWRTK+P + R TEQWFA ++  +  A + + +      +  P  G
Sbjct: 467 YLLLKEDYSHRYPYDWRTKQPILIRMTEQWFAELKDLKNVAKEYVDE----KIEMIPSSG 522

Query: 340 ADVLRLWVSSVD 351
            + L+ +V S D
Sbjct: 523 RNRLKSFVESRD 534



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 178/338 (52%), Gaps = 29/338 (8%)

Query: 339  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
            G DVLRLWVS  D++ DV IG  V+ ++S   +K+R T +++LG L ++     +S + L
Sbjct: 695  GVDVLRLWVSHSDFSVDVSIGKNVIEKVSTNLKKIRNTAKFMLGVLENYDPNLPVSKEQL 754

Query: 399  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
              +D Y + +++     I ESYE++ ++K+ Q++  F   +LS+FY D+ KDRLY G   
Sbjct: 755  VEVDYYIINRVKQFCDQITESYENFNYYKVNQLLMTF-TYELSSFYLDIVKDRLYCGEEE 813

Query: 459  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVL 518
            +  R+  Q V+   L    + ++PI+ H AED++Q++ F          + +FE  W + 
Sbjct: 814  A--RKPSQKVIHYILDCYTKALSPIICHTAEDIYQSMEF-------KKNKSIFEEGWFIK 864

Query: 519  DEKWRT---FPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
             E +      P  E     + +++ELR E+ K++E AR  K+  +S E KV + + ++  
Sbjct: 865  PEDFFQGIELPQEEKTTEMFNQVIELRQEIFKLIEKARMDKVFRTSNEVKVTIESVESEK 924

Query: 574  ASR----LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVE-GKDKVW 628
              +    L    T ++    L+ I ++S VE L     G+  N  Y+ +Y       KV 
Sbjct: 925  LIQAIQPLLSQSTKQNKNTQLEDIMMVSSVEWL----KGINPNPLYTLQYETSLDSKKVS 980

Query: 629  IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            + +S+A+  KC RCW ++    S VE+   C RC  VL
Sbjct: 981  LSISKADLHKCPRCWRFA----SVVENEP-CGRCAHVL 1013


>gi|422849171|ref|ZP_16895847.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|325690192|gb|EGD32196.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 930

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 191/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL  +YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G T + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWTDVQVLDT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L     VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNQIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     V   + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 184/350 (52%), Gaps = 36/350 (10%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V
Sbjct: 606 PSDVEKQFGAEILRLWVTSVDSSNDVRISMDILGQVSETYRKIRNTLRFLIANTSDFNPV 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++Y+DL  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ VDLS FY D AK
Sbjct: 666 EDAVAYEDLRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  RR  QTV    L+ I +++ PILPH AE++W  L       +    EF
Sbjct: 726 DVVYIEAAKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYL-------EHEEEEF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKD 625
            ++      ++ +  A  ++D  Q + I+SQ+ +   P+    L+              +
Sbjct: 835 PNEV-----IKTLLEAV-NSDVAQ-LLIVSQLTIAEGPAPEGALVF-------------E 874

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMA 675
            V   V  A+G  C+RC    T V        +C  C E+L    + ++A
Sbjct: 875 DVAFVVEHAQGQVCDRCRRIDTTVKERSYQALVCDHCAEILEENFVQAVA 924


>gi|422871405|ref|ZP_16917898.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
 gi|328945573|gb|EGG39724.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 937

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 192/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL  +YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTSDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G T + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWTDVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L     VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNQIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYHVGVANGLEVA 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     VV  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFEGQFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I ++K+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIDKIKF 432



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 45/350 (12%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 389
           P      +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+   
Sbjct: 606 PSDVEKQFGAEILRLWVTSVDSSNDVRISMDILGQVSETYRKIRNTLRFLIANTSDFNPA 665

Query: 390 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 449
            ++++Y++L  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ +DLS FY D AK
Sbjct: 666 EDAVAYEELRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTIDLSAFYLDFAK 725

Query: 450 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 509
           D +Y     S  RR  QTV    L+ I +++ PILPH AE++W  L       +    EF
Sbjct: 726 DVVYIEAAKSLERRQMQTVFYDVLVKITKLLTPILPHTAEEIWSYL-------EHEKEEF 778

Query: 510 VFESKWPVLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLF 567
           V  S+ P    + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++
Sbjct: 779 VQLSELP----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVY 834

Query: 568 TDDASLASRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKD 625
            ++      ++ +  A  ++D  Q + I+SQ+ ++  P+    L+              +
Sbjct: 835 PNEV-----IKTLLEAV-NSDVAQ-LLIVSQLTIIEGPAPEGALVF-------------E 874

Query: 626 KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPT---------LCSRCYEVL 666
            V   V  A+G  C+RC    + V +F+ H T         LC  CY++L
Sbjct: 875 DVAFVVEHAQGQVCDRCRRNDSTVKTFLIHNTEDGESLNSQLCDHCYDIL 924


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/358 (38%), Positives = 212/358 (59%), Gaps = 42/358 (11%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    ++G V  + PQE     GAD++RLWVS+ DY  D+ +  ++L+++++ Y
Sbjct: 594 TVDGQGRKMSKSLGNV--ISPQEIIKSNGADIVRLWVSAEDYRDDIKLSQEILQRLTEAY 651

Query: 371 RKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 430
           RK+R TLRYLLGN++D+   +    D L  ID++A+ +L+ ++  +R +YE+++F ++F 
Sbjct: 652 RKIRNTLRYLLGNIYDYDAKDYT--DQLLEIDRWAMMRLQKLIGKVRLAYENFEFHQVFH 709

Query: 431 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 490
            I  F + D+S FY D+ KDRLYT  + S  RR+ Q VL     S++++IAPIL   AE+
Sbjct: 710 AIYNFCVTDMSAFYLDILKDRLYTFKSDSPERRAAQWVLYNIADSLIKLIAPILSFTAEE 769

Query: 491 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF-WGKILELRTEVNKVLEV 549
            WQ+LPF  T       E VF  + P ++E   +F   E+   W K++E+R EVNK LE+
Sbjct: 770 AWQHLPFKKT-------ESVFLDRMPEIEE---SFIDEELQLKWEKLIEIRDEVNKALEI 819

Query: 550 ARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGL 609
            R  K IG+SLEAKV L     S+   L++  +  +  D L  +FI+SQV++        
Sbjct: 820 KRQEKFIGNSLEAKVIL-----SVNPELKKFLSPYY--DFLPTLFIVSQVKLSD------ 866

Query: 610 IRNIPYSGEYLVEGKDKVW-IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
                      +E KD  + + + +AEG KC+RCWNYS  VG  +E P LC RCY V+
Sbjct: 867 -----------LESKDTEFTVTIDKAEGQKCQRCWNYSPMVGK-LEIPDLCPRCYHVI 912



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 181/330 (54%), Gaps = 35/330 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV+  W+ PY+T+  EYEA  ++ F      GY+YRGKKPV+W PS  TALA+AE+
Sbjct: 144 FIRLGVFGYWDEPYITMSNEYEATIVKEFLSFVKNGYVYRGKKPVYWCPSCVTALADAEV 203

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SI+  F ++        + NE    L + +WTTTPWT+PAN A+AV+    
Sbjct: 204 EYADKE-SPSIFVAFEVIDR--DRFSVKNE---PLYIVIWTTTPWTLPANLALAVHPDFD 257

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  V                        K  K + +IV  + +  L+ K          +
Sbjct: 258 YVGV------------------------KSSKGILVIV-KEAIKNLKDKIDIDETPLFEI 292

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            GS LE  +  HP  +R   VV+  D++ T  GTG+VH APGHG EDY   LKYG  I +
Sbjct: 293 KGSKLEGIKAKHPFIDRVSKVVV-ADFVETGEGTGVVHIAPGHGDEDYEVGLKYGFDIYA 351

Query: 244 PVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIF 303
           PVDD+G+FTE+   F+G +V    N A+++++ E  SLI E    H YP+ WR KKP IF
Sbjct: 352 PVDDKGRFTEDVPYFAGENVFK-ANKAIIEHMKENGSLIWEGKITHSYPHCWRCKKPIIF 410

Query: 304 RATEQWFASV--EGFRQAAMDAIGQVKWVP 331
           RAT QWF S+  +  R  A+  I +V+W+P
Sbjct: 411 RATTQWFISMSHKDLRHRALQEIDKVRWIP 440


>gi|358464417|ref|ZP_09174381.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 058 str.
           F0407]
 gi|357066817|gb|EHI76950.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 058 str.
           F0407]
          Length = 930

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 193/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWENPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +V+           PA++  +             +VA++L+ +L  K+G   + +  T
Sbjct: 251 YVLVK-----------PADESRK------------FVVAAELLTSLSEKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +   VHP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVA 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     VV  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVVPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 174/333 (52%), Gaps = 34/333 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+    ++++Y+
Sbjct: 613 FGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYE 672

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D+Y   +   +VK IR++Y +++F  I++ +  FI VDLS FY D AKD +Y  G
Sbjct: 673 ELRSVDKYMTIRFNQLVKIIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEG 732

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR  QTV    L+ I +++ PILPH AE++W  L F        A +FV  S+ P
Sbjct: 733 AKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYLEF-------EAEDFVQLSELP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
               + +TF   E  +  W   ++ R +  K LE AR  K+IG SLEA + ++ ++    
Sbjct: 786 ----EAQTFANQEEILDTWSAFMDFRGQAQKALEEARNAKVIGKSLEAHLTVYPNE---- 837

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVLPS-TPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
             + +      D++  Q + I+S++ +     P G +              + V   V R
Sbjct: 838 --VVKTLLGAVDSNVAQ-LLIVSELTIAEGPAPEGAV------------AFEDVAFTVER 882

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C+RC            H  +C  C  ++
Sbjct: 883 AAGEVCDRCRRIDPTTAERSYHAVICDHCASIV 915


>gi|344339575|ref|ZP_08770503.1| Isoleucyl-tRNA synthetase [Thiocapsa marina 5811]
 gi|343800311|gb|EGV18257.1| Isoleucyl-tRNA synthetase [Thiocapsa marina 5811]
          Length = 943

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 186/337 (55%), Gaps = 35/337 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV+ DW NPYLT+D  +EA  I   G++   G++ +G KPVHW     +ALAEAE+
Sbjct: 141 FKRLGVFGDWENPYLTMDFGFEAEIIRSLGRIIANGHVQKGFKPVHWCIDCGSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LGLAVWTTTPWTVPANAAVA 117
           EY +    +SI    R     P T        P+        + +WTTTPWT+PAN AVA
Sbjct: 201 EYAD---KQSIAIDVRFPVVEPETLEARCHGTPNGCGEGPASIVIWTTTPWTLPANQAVA 257

Query: 118 VNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-K 176
           +NA+L+Y VVE+ S                      Q    +IVA  L+     +WG  +
Sbjct: 258 LNAELEYVVVEVASA---------------------QGHERLIVAEGLLKDTMDRWGIEQ 296

Query: 177 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
             +     G D E  +  HP  +R+ PV++ G+++T ++GTG VHTAPGHG EDY+   +
Sbjct: 297 YRVMGYGRGIDFEGLKLKHPFYDREVPVIV-GEHVTLDAGTGAVHTAPGHGLEDYIVGQR 355

Query: 237 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 296
           Y LP+ +PV  +G+F  +   F+G +V    N  VV+ L  + +L++E  + H YP+ WR
Sbjct: 356 YHLPVHNPVGGDGRFLPDTPLFAGENVF-KANEHVVETLKAKGALLLETRFTHSYPHCWR 414

Query: 297 TKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            K P IFRAT QWF  +E  G R+AA+  IG V W+P
Sbjct: 415 HKTPIIFRATPQWFIGMEKQGLRKAALREIGHVSWMP 451



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 183/347 (52%), Gaps = 38/347 (10%)

Query: 330 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           V PQ+     GAD++RLWV++ DY  ++ +  ++L++ +D YR++R T R+LL NL  + 
Sbjct: 617 VKPQDVMKTLGADIIRLWVAATDYRAEMGVSDEILKRTADAYRRIRNTARFLLANLDGFD 676

Query: 389 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + ++ + +  +D++A+ +   + + + ++Y  YQF  I+Q +Q+F +VD+ +FY DV
Sbjct: 677 PATDRVAPEAMLELDRWAVDRAFRLQQEVVDAYRDYQFHVIYQKVQQFCVVDMGSFYLDV 736

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDR YT  + S  RRSCQT +     ++ R +APIL   AE++WQ LP       G   
Sbjct: 737 IKDRQYTTQSDSLPRRSCQTAMYHIAEAMSRWLAPILSFTAEEIWQYLP-------GERT 789

Query: 508 EFVFESKWPVLDEKWRTFPVG-----EIYFWGKILELRTEVNKVLEVARTGKLIGSSLEA 562
           E VF   W         FP+      +  FW +++  R  V   LE AR   LIGSSL+A
Sbjct: 790 ETVFVETWYA-----GLFPLADGDPMDRAFWDQVIATRLAVGPALETARKSGLIGSSLDA 844

Query: 563 KVYLFTDDA--SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYL 620
           ++ L+  +   ++  RL E          L+   I S+V + PS+            + L
Sbjct: 845 ELDLYCAEPLYAVLGRLGE---------ELRFALITSEVRLHPSSEQ--------PTDAL 887

Query: 621 VEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
                 + + V  ++ +KC RCW++   VG+  EHP LC RC E +A
Sbjct: 888 ETDLKGLAVRVRPSKHTKCVRCWHHRPDVGTHAEHPELCGRCVENVA 934


>gi|116624431|ref|YP_826587.1| isoleucyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227593|gb|ABJ86302.1| Isoleucyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 939

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 183/336 (54%), Gaps = 36/336 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV   W +PYLT+  EY++     F     +GY+Y+G KPVHW    RTALAEAE+
Sbjct: 145 FKRLGVLGHWEDPYLTMSAEYQSVIAGAFVDFLDRGYVYKGLKPVHWCIKDRTALAEAEV 204

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S SI+  F + S P S    L       GL +WTTTPWT+PAN A+A N +  
Sbjct: 205 EYAD-HSSPSIWVRFALTSDPASIDPALTG-RKVYGL-IWTTTPWTIPANMAIAYNPRFD 261

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           YA V++                  G+V    + +  + A  L       WG    +  T 
Sbjct: 262 YAAVDVA-----------------GDVYLVAEGLLNVTAEKL------GWGGYTKV-ATF 297

Query: 184 AGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILS 243
            G+ +E   + HP+  R+  + I  DY+T E GTG VHTAPGHGQEDY +  KYG+P   
Sbjct: 298 QGAQIEGAVFRHPLFERES-IGILADYVTLEQGTGGVHTAPGHGQEDYASGQKYGIPTFC 356

Query: 244 PVDDEGKFTEEAGKFSGL--DVLG----DGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRT 297
           PVD  G+F    G    +  D++G    +GN  VV++L    +L+  E   H YP+ WR 
Sbjct: 357 PVDAAGRFFRAEGAPGHIPDDLIGKTIWEGNPLVVEHLKAAGALLGMEKLAHSYPHCWRC 416

Query: 298 KKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
             P IFRATEQWF  +E   FRQ+A+DAI +VKW+P
Sbjct: 417 HNPVIFRATEQWFIGMERNNFRQSALDAIKKVKWMP 452



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 176/326 (53%), Gaps = 29/326 (8%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GAD+LRLW +SV++  DV +   +L ++ D YRKLR T RY+LGNL D+    +S++  
Sbjct: 632 HGADILRLWTASVEFNEDVRMSDTILTRLVDAYRKLRNTFRYMLGNLSDFDPQADSVAPA 691

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +DQ+ L + +++V   R  Y+ + F KI+  +  F  VDLS+ YFDV KDRLY  G
Sbjct: 692 ELTELDQWILLRADDLVTRCRAWYDEFAFHKIYHAVYAFATVDLSSVYFDVLKDRLYCSG 751

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                RR+ QT L   +  +VR++AP++   AE+VW ++    ++      E    S   
Sbjct: 752 AKWPERRAAQTTLYRLMDGLVRLLAPMMSFTAEEVWGHMKRPDSVHMAHFPEAGDFSAGL 811

Query: 517 VLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASR 576
             D + R    G++     +L++R  V K L+ AR  KLIG+ LEA V L T    L   
Sbjct: 812 NDDARNRA---GKM---DALLQVREAVLKQLDTARNEKLIGAPLEALVRL-TASPELYPL 864

Query: 577 LREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEG 636
           L +       AD L  +FI+S VE+ PS     +       E  VE        V RA G
Sbjct: 865 LVQY------ADFLPALFIVSAVEIEPSAQGVAV-------ELSVE--------VERAPG 903

Query: 637 SKCERCWNYSTQVGSFVEHPTLCSRC 662
            KCERCW YS +VG+    PTLC+RC
Sbjct: 904 DKCERCWKYSKEVGTDPVLPTLCARC 929


>gi|350295981|gb|EGZ76958.1| isoleucyl-tRNA synthetase [Neurospora tetrasperma FGSC 2509]
          Length = 962

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 191/340 (56%), Gaps = 36/340 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M SF+ Y V + W N + T+D  +E  Q+ +F +M  +G IYR  KPV+WSPSS TALAE
Sbjct: 135 MDSFRTYAVMSGWENRWTTMDMAFEINQLRLFQKMVSRGLIYRKFKPVYWSPSSGTALAE 194

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AELEY E H+S+S Y  F +        G L  F  +L   +WTTTPWT+PAN A+AV+ 
Sbjct: 195 AELEYNEAHISKSAYVRFPITKDSARIPG-LEGFTGNLYAVIWTTTPWTLPANRAIAVHD 253

Query: 121 KLQYAVVEIQSLLEGDSA--APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
            L Y  V +     GD A         R   VL  ++    I+A                
Sbjct: 254 DLLYHAVRV-----GDDAYLVAEGGLERVAKVLMGEEGTPEILA---------------- 292

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
              T+ GS L   +YV+P+  +       I G ++T +SG+GLVH APGHG +DY+    
Sbjct: 293 ---TVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLVHCAPGHGFDDYLLCKD 349

Query: 237 YGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 291
            G+ + +PVD++G FTEEA      +  G+ VL  G+ AV++   + +  + +  Y+HKY
Sbjct: 350 LGILVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKDNVLNVHK--YKHKY 407

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           PYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 408 PYDWRTKKPIIIRATAQWFADVDNIKELALKALEEVKFVP 447



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 161/351 (45%), Gaps = 55/351 (15%)

Query: 331 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 390
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 649 PPKDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 701

Query: 391 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 450
            S     L  +D  AL QL++ +  I   Y++Y+F K F  + R+I  DLS FY +  KD
Sbjct: 702 QSARAAPLTALDHIALVQLKDAMAEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKD 761

Query: 451 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 510
           RLY              VL    +  +R++API P L E+ W++ P A+  ED S    +
Sbjct: 762 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRP-AWMKEDPSILHPL 812

Query: 511 FE-SKWPVLDEK---------WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL 560
            +    P++D            R  PV        ++E    +    E+AR GK++GSSL
Sbjct: 813 HQLYNSPLIDSSRLSYDEAVLRRDIPV--------LMETHAAIKAASELARRGKVLGSSL 864

Query: 561 EAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIP---YSG 617
              V +   + S A     +   +   D L  +F++S V++      G+I   P   Y  
Sbjct: 865 GCSVVIKAPEESKA-----LSVLQKYKDELDAMFVVSSVDL-----GGVIEGEPAWKYVQ 914

Query: 618 EYLVEGKD-KVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
           ++ + G   + W  V   +  KC RCW +           +LC RC +V+ 
Sbjct: 915 DFEMGGHGCQAW--VLPPKDHKCPRCWRFVAPA-----EDSLCVRCEDVVG 958


>gi|422883612|ref|ZP_16930061.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK49]
 gi|332362885|gb|EGJ40678.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 930

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 190/329 (57%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKDG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y VV+           PA +  +             +VAS+L+ +L  K+G   + +  T
Sbjct: 251 YVVVQ-----------PAGESRK------------FVVASELLNSLSEKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L      HP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNQIVTAHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVF 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     V   + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFAGQFYDKVAPTVIEKLGDLLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIEKVKF 432



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 178/334 (53%), Gaps = 36/334 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V ++++Y+
Sbjct: 613 FGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYE 672

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ VDLS FY D AKD +Y   
Sbjct: 673 ELRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEA 732

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR  QTV    L+ I +++ PILPH AE++W  L       +    EFV  S+ P
Sbjct: 733 AKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYL-------EHEEEEFVQLSELP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
               +  TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++ ++    
Sbjct: 786 ----EALTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVYPNEV--- 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             ++ +  A  ++D  Q + I+SQ+ +   P+    L+              + V   V 
Sbjct: 839 --IKTLLEAV-NSDVAQ-LLIVSQLTIAEGPAPEGALVF-------------EDVAFVVE 881

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            A+G  C+RC    T V        +C  C E+L
Sbjct: 882 HAQGQVCDRCRRIDTTVKERSYQALVCDHCAEIL 915


>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822091|sp|Q5WFI3.1|SYI_BACSK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 923

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 199/329 (60%), Gaps = 36/329 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW  PY+TL+ E+EA QI+VFG+M+ +GYIY+GKKPV+WSPSS +ALAEAE+
Sbjct: 140 FMRLGVRGDWWKPYITLEKEFEAEQIKVFGKMAKKGYIYKGKKPVYWSPSSESALAEAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +   S SIY  F++        G+L E   D  L +WTTTPWT+PAN  + V+ +L+
Sbjct: 200 EYYDKR-SASIYVAFQVADG----KGVLPE---DAALVIWTTTPWTIPANLGITVHPQLE 251

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y+VV                  R G       + F +VAS L+  ++ +     +V++KT
Sbjct: 252 YSVV------------------RTGG------RSF-VVASGLLEHVQTELSWEDVVVEKT 286

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
           + G +L+     HP  +R   +V+ G+++T ++GTG VHTAPGHG +D+V   KYGL +L
Sbjct: 287 VTGKELDYIVCRHPFYDRDS-IVMNGEHVTLDAGTGCVHTAPGHGVDDFVVGQKYGLDVL 345

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTI 302
            P+DD+G  T EA  F G +   + N  V + L+   +L+      H YP+DWRTKKP I
Sbjct: 346 CPIDDKGIMTSEAPGFEG-EFYDNINKMVTEKLEAVGALLKLGFITHSYPHDWRTKKPVI 404

Query: 303 FRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           FRAT QWFAS+   R+  + A+   +W+P
Sbjct: 405 FRATSQWFASIANIRKELLQAVANTEWIP 433



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 27/338 (7%)

Query: 330 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 389
           VP       GAD+LRLWV+SVDY  D  +   +L+Q+++ YRK+R T R+LLGNLHD+  
Sbjct: 604 VPNTVMKQLGADILRLWVASVDYQADSRVSDSILKQVAETYRKIRNTFRFLLGNLHDFDP 663

Query: 390 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 448
             N++  D L  +  + L +L  + K + E Y  YQF  ++   + F  V+LS+FY D++
Sbjct: 664 KINAVPRDQLTGVHAFLLVRLNELTKRMHEGYNEYQFLNVYNHFRNFCTVELSSFYMDIS 723

Query: 449 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 508
           KD LY        RR+ QTV+   + ++ ++IAPILPH A++VW+N+P       G + +
Sbjct: 724 KDTLYIEHADHPERRAFQTVMYEVVTALTKLIAPILPHTADEVWENIP-------GVSEQ 776

Query: 509 FVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFT 568
            V  +  P  +E   T  +     W   +++R +V K LEVAR  K+IG SL+A + L+ 
Sbjct: 777 SVQLTDMPTAEELSGTDELKA--HWQAFMDIRADVLKALEVARNEKVIGKSLQASLTLYP 834

Query: 569 DDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVW 628
           +      + R +  A    + L+++FI+S V++           +P + +   +    V 
Sbjct: 835 N-----KQARALLEA---TEGLKKLFIVSNVQIANEGD-----EVPAAAQQFAD----VA 877

Query: 629 IGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           + V +AEG  CERCW  S  VG+  +HPTLC  C + +
Sbjct: 878 VLVEKAEGETCERCWQVSNTVGADEKHPTLCLSCAQTV 915


>gi|197294428|ref|YP_001798969.1| isoleucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853755|emb|CAM11681.1| Isoleucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 896

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 182/332 (54%), Gaps = 40/332 (12%)

Query: 3   SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAE 62
            F+R GV ADW NPYLTL+  + A QI +FGQM+ Q  I++  KP++WSP+  +ALAEAE
Sbjct: 139 QFQRLGVLADWKNPYLTLNKNFMANQIRIFGQMADQELIFKALKPIYWSPTLESALAEAE 198

Query: 63  LEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKL 122
           LEY + HVS SIY  F M            +   +  L +WTTTPWT+PAN A+AVN + 
Sbjct: 199 LEYYD-HVSPSIYIAFPMKET---------DLFKNTALIIWTTTPWTLPANMAIAVNPEK 248

Query: 123 QYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK--WGTKLV-I 179
            Y ++++                       +QK+   +V ++ +P L+ K  W  K + I
Sbjct: 249 NYQLIDV-----------------------NQKRY--LVGANNLPKLQKKFSWDDKEIKI 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
                G +LEN  Y +PV   Q  V++  +++  + GTGLVHTAPGHG ED++ + KYG+
Sbjct: 284 IANFQGKELENLEYFNPVGGNQGKVIL-AEHVLDDEGTGLVHTAPGHGLEDFLVAQKYGI 342

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
            ++  ++ +G  T    K+ GL      N  ++  L     L+  E   H YP+DWRTKK
Sbjct: 343 QVVCSINKKGFMTALTKKYEGL-FYTKANDEIIADLKNSNHLLKSETITHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P +  A  QWF S+E  +   +  + +V WVP
Sbjct: 402 PVVSLALSQWFVSIEKIKNNLLKEVQKVNWVP 433



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 170/333 (51%), Gaps = 40/333 (12%)

Query: 335 APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGNSI 393
           A   GAD++RLW ++V+Y  DV I   +L Q+ DIYRK+R T R++LGNLH + +  + I
Sbjct: 602 ASQKGADIIRLWAANVNYNFDVRINNDILTQIEDIYRKIRNTFRFMLGNLHAFDKNQDYI 661

Query: 394 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 453
           ++++   I Q  +  LE ++K I +SY+SY F  I + +  FI   +S FYFD AKD LY
Sbjct: 662 TFENRTPIHQAVILDLEEVLKKIIQSYQSYNFEGILRNLFPFITNKISAFYFDFAKDILY 721

Query: 454 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 513
                SF R+  Q+ +   L + ++++ PI+PH   +V+   PF +  +D      ++  
Sbjct: 722 IEKQNSFERKMIQSNIYDLLSAFLKILTPIIPHTTSEVYSFCPF-FDQKD------IYLE 774

Query: 514 KWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASL 573
           K P L  +  +  + E Y     L LR +V +VLE AR   +I SSL+A + LF     +
Sbjct: 775 KMPQLKTRQESNLLEEYY---NFLSLRKDVLQVLEKARKKNIINSSLQAHLNLFLTTKQM 831

Query: 574 ASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSR 633
            + L+ +   K     L ++FI+SQ+                     +  K+   + V +
Sbjct: 832 HT-LKVLKIEKQ----LHQLFIVSQIT--------------------LNQKESFGVDVMK 866

Query: 634 AEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           A G  C+RCWN   Q         LC RC  +L
Sbjct: 867 ANGYACKRCWNVVIQESD----QDLCKRCQTIL 895


>gi|429864032|gb|ELA38417.1| isoleucyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
          Length = 913

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 192/341 (56%), Gaps = 42/341 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ Y V  DW+  + T+DP++E  Q+ +F QM  +G IYR  KPV+WSPSSRTALAE
Sbjct: 134 MEGFRSYAVMGDWDARWTTMDPDFEIRQLRLFQQMVRRGLIYRKNKPVYWSPSSRTALAE 193

Query: 61  AELEYPEGHVSRSIYAVFRMVSAP--PSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 118
           AELEY E HVS + Y  + ++  P  P  SG L          +WTTTPWT+PAN A+A+
Sbjct: 194 AELEYNENHVSTAAYVRYPIIDGPALPGFSGQLYAI-------IWTTTPWTLPANKAIAI 246

Query: 119 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 178
           +  L+YAV+ +      + +A     +R    L+  K +F    +D  P          V
Sbjct: 247 HDDLEYAVIAV------NGSAYLTAVTR----LEAVKALF----TDAEPE---------V 283

Query: 179 IKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 236
           I  ++ GS+L   +Y + +   Q     +I  D+++ +SGTGLVH APGHG EDY     
Sbjct: 284 IVPSIKGSELRGLKYHNRLQGVQSTPQPIIHADFVSADSGTGLVHIAPGHGFEDYEACAA 343

Query: 237 YGLPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 290
            G+   +P+DDEG FT EA             +L  G+ AV+  +++   ++    Y+HK
Sbjct: 344 LGIDAFAPIDDEGNFTSEAFPDAPEKLTQSSSILKGGSKAVLALIEDD--VLQAAKYKHK 401

Query: 291 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           YPYDWRTK+P + R+T QWFA V+  +  A+ A+  VK+VP
Sbjct: 402 YPYDWRTKQPVVMRSTAQWFADVDSIKDDAITALKDVKFVP 442



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 163/339 (48%), Gaps = 44/339 (12%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 398
           G D +RLW +S +YT DV IG  VL+ +     K R  ++ LLG++H+     S      
Sbjct: 609 GPDGIRLWAASSEYTKDVAIGQNVLKSVHIQLVKYRTIIKMLLGSMHE-----SARTAPT 663

Query: 399 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 458
             +D  AL QL+++++ ++++Y S++F++ F  I R++  DLS FY +  KDRLY G   
Sbjct: 664 TTLDHIALVQLKDVMEEVQKAYASHEFYRAFSAINRWVSNDLSAFYLEAMKDRLYCGDGG 723

Query: 459 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN-----LPFAYTLEDGSAAEFVFES 513
                    VL       +R+++P+ P L E+ W +     LP  + L+    A  V   
Sbjct: 724 G--------VLEPIFHGFLRMLSPMTPLLVEEAWDHRPEWMLPLVHPLQTPYDA-LVHTI 774

Query: 514 KWPVLDEK--WRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDA 571
              V++E    +  P         +L   + +    E+ R+ K++GS+L++ V L ++D 
Sbjct: 775 PSSVINETSLRKDIPA--------LLTANSAIKAAQELGRSAKVLGSALQSSVILNSEDP 826

Query: 572 SLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWI-- 629
           ++   L +    KH+   L+ +F++S V+V   TP        Y+ E  + GK +  +  
Sbjct: 827 AILGVLEKY---KHE---LEAMFVVSSVDV--GTPVPEASEWKYAVESAMPGKPQALVHA 878

Query: 630 GVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
            V   +  KC RCW Y        +   LC RC +V A 
Sbjct: 879 TVLPPKDHKCPRCWRYIAP-----KEDDLCGRCEDVTAT 912


>gi|422881778|ref|ZP_16928234.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK355]
 gi|332363501|gb|EGJ41283.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 930

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/329 (42%), Positives = 192/329 (58%), Gaps = 38/329 (11%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW+NPY+TL P+YEAAQI VFG+M+ +GYIYRG KPV+WS SS +ALAEAE+
Sbjct: 139 FKRLGVSGDWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEI 198

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY +  VS S+Y   R+        G+L+    D  + VWTTTP+T+ A+  + V A + 
Sbjct: 199 EYHD-LVSTSLYYANRVKEG----KGVLD---TDTYIVVWTTTPFTITASRGLTVGADID 250

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVIKKT 182
           Y +V+           PA +  +             IVAS+L+ +L  K+G   + +  T
Sbjct: 251 YVLVQ-----------PAGESRK------------FIVASELLNSLSEKFGWADVQVLAT 287

Query: 183 LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPIL 242
             G +L +    HP D     +VI GD++TT+SGTG+VHTAPG G++DY   +  GL + 
Sbjct: 288 YRGQELNHIVTAHPWDTAVDELVILGDHVTTDSGTGVVHTAPGFGEDDYHVGVANGLEVA 347

Query: 243 SPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS--LIMEEPYEHKYPYDWRTKKP 300
             V++ G   E AG     D  G     VV  + E++   L+ +E   H YP+DWRTKKP
Sbjct: 348 VTVNERGIMMENAGP----DFEGQFYDKVVPTVIEKLGDFLLAQEEISHSYPFDWRTKKP 403

Query: 301 TIFRATEQWFASVEGFRQAAMDAIGQVKW 329
            I+RA  QWFASV  FRQ  +D I +VK+
Sbjct: 404 IIWRAVPQWFASVSKFRQEILDEIDKVKF 432



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 180/334 (53%), Gaps = 36/334 (10%)

Query: 338 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 396
           +GA++LRLWV+SVD + DV I   +L Q+S+ YRK+R TLR+L+ N  D+  V ++++Y+
Sbjct: 613 FGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYE 672

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
           +L  +D+Y   +   +V+ IR++Y  ++F  I++ I  F+ VDLS FY D AKD +Y   
Sbjct: 673 ELRSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEA 732

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
             S  RR  QTV    L+ + +++ PILPH AE++W  L       +    EFV  S+ P
Sbjct: 733 AKSLERRQMQTVFYDILVKVTKLLTPILPHTAEEIWSYL-------EHEEEEFVQLSELP 785

Query: 517 VLDEKWRTFPVGE--IYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLA 574
               + +TFP  E  +  W   ++ R++  K LE AR  K+IG SLEA + ++ ++    
Sbjct: 786 ----EAQTFPNQEEILDTWSAFMDFRSQAQKALEEARNEKVIGKSLEAHLTVYPNEV--- 838

Query: 575 SRLREMCTAKHDADTLQRIFIISQVEVL--PSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 632
             ++ +  A  ++D  Q + I+SQ+ ++  P+    L+              + V   V 
Sbjct: 839 --IKTLLEAV-NSDVAQ-LLIVSQLTIVDGPAPEGALVF-------------EDVAFVVE 881

Query: 633 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
            A+G  C+RC    T V        +C  C E+L
Sbjct: 882 HAQGQVCDRCRRIDTTVKERSYQALVCDHCAEIL 915


>gi|373466932|ref|ZP_09558241.1| isoleucine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
 gi|371759696|gb|EHO48408.1| isoleucine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
          Length = 941

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/333 (40%), Positives = 191/333 (57%), Gaps = 33/333 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G KPVHW     ++LAEAE+
Sbjct: 142 FIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEV 201

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY E  VS SIY  F  VSA         + +    L   +WTTTPWT+P+N A+AVNA+
Sbjct: 202 EY-EDKVSPSIYVRFPTVSAVEIEEKFNAVGKGHGKLSAVIWTTTPWTMPSNRAIAVNAE 260

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IK 180
           L+Y +V+                      L D++   +I+A++LV ++    G + V I 
Sbjct: 261 LEYNLVQ----------------------LGDER---VILAAELVESVAKAVGVEQVEIL 295

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
            ++ G  LE  R+ HP  N   PV++ GD++TT+ GTGLVHTAP HG +D++   KY LP
Sbjct: 296 GSVKGQALELVRFNHPFYNFTVPVIL-GDHVTTDGGTGLVHTAPDHGLDDFIVGQKYNLP 354

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
           +   V ++GKF      F+G  V  + N  VV+ L E  +L+  E  +H YP+ WR K P
Sbjct: 355 MAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLLKVEKIKHSYPHCWRHKTP 413

Query: 301 TIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 414 IIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 211/362 (58%), Gaps = 37/362 (10%)

Query: 312 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 370
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 371 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 429
           R++R T R+LL NL+ +      +  +++  +D++A+    +  K I++SY++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQKEIKDSYDNYQFHTVV 713

Query: 430 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 489
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 490 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI-----YFWGKILELRTEVN 544
           ++WQ+LP     E G  AEFVF  ++         F +GE       +W +++++R+EVN
Sbjct: 774 EIWQHLP---QTESGR-AEFVFTEEF-----YQGLFGLGENEKLDDAYWQQLIKVRSEVN 824

Query: 545 KVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEV--L 602
           +VLEVAR  K+IG  LEA+V ++ +D   A  L E        + L+ + I S+ EV  L
Sbjct: 825 RVLEVARNDKVIGGGLEAEVTVYANDEYRA--LLEQL-----GNELRFVLITSKAEVKAL 877

Query: 603 PSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
              P  +      +GE  +EG   + + V+R+ G KC RCW+YS ++G   EHPTLC RC
Sbjct: 878 ADKPADVA-----AGE--LEG---IAVSVARSNGEKCPRCWHYSDKIGVNSEHPTLCPRC 927

Query: 663 YE 664
            E
Sbjct: 928 VE 929


>gi|295425123|ref|ZP_06817828.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065182|gb|EFG56085.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 927

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 202/332 (60%), Gaps = 35/332 (10%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  FKR GV ADW++PY+TL PE+EA +I +FG+M  +GYIY+GKKPV+WS SS + LAE
Sbjct: 136 MTDFKRLGVMADWDHPYITLQPEFEAEEIRIFGEMYKKGYIYKGKKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +   + SI+  F +        G+++    +    +WTTTPWT+PAN A+ VN 
Sbjct: 196 AEVEYKDVK-ANSIFVAFPVKDG----KGIIDP--ENTYFVIWTTTPWTIPANEAICVNP 248

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI 179
           K  Y VV +     GD                       +VA+ L+ ++  + G K   +
Sbjct: 249 KFDYVVVNV-----GDKN--------------------YVVAAGLLDSVAEQIGWKDYKV 283

Query: 180 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 239
            KT+ G+D+E     HP+ +++  +VI G ++T + GTGLVHTAPG G++D+    KY L
Sbjct: 284 IKTIKGADMEYMTAKHPLYDKES-LVIEGFHVTLDDGTGLVHTAPGFGEDDFNVGQKYHL 342

Query: 240 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 299
           PI SPVD +GK+T+E  + +G+    D +  +V+ L +  +L+  + + H YP+DWRTKK
Sbjct: 343 PIFSPVDAQGKYTDEVPELAGM-FYQDVDKLMVQKLKDCGALLKLKVFTHSYPHDWRTKK 401

Query: 300 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P IFRAT QWFAS+E FR+  +D I +  ++P
Sbjct: 402 PVIFRATTQWFASIEPFRKQILDQIDKASFIP 433



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 170/331 (51%), Gaps = 33/331 (9%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+  D + DV +   +L Q ++ YRK+R T RY+L N  D+    N I+Y+D
Sbjct: 613 GAEIIRLWVAQADTSSDVAVSYDILSQSAESYRKIRNTFRYMLANTSDFDPEKNRIAYED 672

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           L  +DQY   +L +++++   +Y+ Y F  +F+ +  FI  DLS+FY D AKD LY    
Sbjct: 673 LRSVDQYMEVKLNDLIRDCLAAYDKYDFSTVFKKVFNFISNDLSSFYLDFAKDVLYIEAK 732

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT-LEDGSAAEFV-FESKW 515
            S  RRS QTV+    + + +++ PILPH  E+VW  L      ++  +  E V +E++ 
Sbjct: 733 DSHARRSMQTVIYDAAVKLAKILTPILPHTMEEVWSFLKEKENYVQLANMPEVVTYENRE 792

Query: 516 PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLAS 575
            +L+             W K + LR +V K LE AR  KLIG S EA V ++ D  +  S
Sbjct: 793 ELLEN------------WHKFMNLRDDVLKALEDARNNKLIGKSFEAAVTIYPDKET-KS 839

Query: 576 RLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAE 635
            L ++          + I I+S++ ++           P + E L    +   I V  AE
Sbjct: 840 MLDDLKA------NFREILIVSKLTIVYG-------EAPANAEKL----NNAAIVVEHAE 882

Query: 636 GSKCERCWNYSTQVGSFVEHPTLCSRCYEVL 666
           G  C RC      +G   + P LC RC E++
Sbjct: 883 GEVCPRCRMIRNDIGKDPKLPMLCGRCAEIV 913


>gi|384208028|ref|YP_005593748.1| isoleucyl-tRNA synthetase [Brachyspira intermedia PWS/A]
 gi|343385678|gb|AEM21168.1| isoleucyl-tRNA synthetase [Brachyspira intermedia PWS/A]
          Length = 923

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 176/332 (53%), Gaps = 36/332 (10%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           FKR GV  DW NPYLT+ PEYE+  +EVF Q+  +GYIY+G + +HW     TALA AE+
Sbjct: 140 FKRLGVMGDWENPYLTMSPEYESEIVEVFAQLVEKGYIYKGLRTIHWCMDCETALAAAEI 199

Query: 64  EYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQ 123
           EY + H S S+Y  F      P  + + ++   ++ + +WTTTPWT+P+N A A N  L+
Sbjct: 200 EYDDNHTSTSVYVRF------PVLNKINDKLDGNVDVMIWTTTPWTLPSNMACAFNRDLE 253

Query: 124 YAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTL 183
           Y  VEI                            + I+ + LV T+ +K   K   +  +
Sbjct: 254 YVAVEIDGR-------------------------YAIMTTSLVDTVLSKKDMKAEGRDMI 288

Query: 184 AGS--DLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 241
             S  ++E     HP    +   V+  DY+   +GTG+VHTAPGHG EDY T + YGL I
Sbjct: 289 PVSMEEIEKLEIAHPFIKDRKSAVVFADYVEATAGTGIVHTAPGHGMEDYQTGMNYGLEI 348

Query: 242 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 301
             PVD  G++T +  +  G+ V  D N  VV+ L+   SL  +E   H YP  WR K P 
Sbjct: 349 YCPVDKAGRYTSDFPEMQGMKVR-DANPKVVEILENNGSLYHKEKVTHSYPICWRCKNPL 407

Query: 302 IFRATEQWFASV--EGFRQAAMDAIGQVKWVP 331
           IFRAT QWF ++  +   +  + A+  +KW P
Sbjct: 408 IFRATSQWFMNMTHDNIDKRTVKALDNIKWYP 439



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 184/363 (50%), Gaps = 33/363 (9%)

Query: 306 TEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLR 364
           T  W    +G  +A   + G V  V P E    YGAD+LRLW  S D+T +  +G  +++
Sbjct: 591 THGWTLDEQG--RAMHKSAGNV--VSPLEVIDKYGADILRLWCISEDFTHNARVGDNMMK 646

Query: 365 QMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESY 423
            ++D YRK+R T RYLLGN+ D+    + I   DL  +D+YAL +L + +K   ++ + Y
Sbjct: 647 AIADNYRKIRNTFRYLLGNISDFDFTKDKIEVKDLLPVDRYALSRLHSFIKVAEKACDGY 706

Query: 424 QFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPI 483
           +F   +Q +  + +V+LS  YFD+ KDRLY     S +RRS QTVL   L  +V++IAP+
Sbjct: 707 EFHLFYQRLINYCVVELSATYFDIIKDRLYCDRKDSVSRRSAQTVLVEILDVLVKIIAPV 766

Query: 484 LPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEV 543
           LP   ++VW      Y  E+ S+        +P  D+      + +   W  IL++R +V
Sbjct: 767 LPFTTDEVWG----YYKGENASSVHLEL---YPKADDNLIDLELEK--EWASILKVRDDV 817

Query: 544 NKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLP 603
              LE AR    IG SLEA V + T + +    L +          L  IFI+S+V +  
Sbjct: 818 LLSLERARDNSTIGKSLEAYVTICTKEPATKELLTKY------EKYLNEIFIVSKVTLSD 871

Query: 604 STPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCY 663
           S  +  I           EG    ++   +A   KC RCW +   VG+  EH  LC+RC 
Sbjct: 872 SKDDTFI-----------EGG-VSFVKTEKASHEKCVRCWGHYDSVGTDSEHKELCTRCA 919

Query: 664 EVL 666
           E +
Sbjct: 920 EAV 922


>gi|347841854|emb|CCD56426.1| similar to isoleucyl-tRNA synthetase [Botryotinia fuckeliana]
          Length = 953

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 195/343 (56%), Gaps = 42/343 (12%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           M  F+ +GV ADW+  + T+D  +E  Q+ VF +M  +G I+R  KPV+WSPSSRTALAE
Sbjct: 146 MKGFREWGVMADWDKAWKTMDKTFETKQLAVFQEMVKKGLIFRRYKPVYWSPSSRTALAE 205

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---LAVWTTTPWTVPANAAVA 117
           AELEY   H+S S Y  F +     + S  L + +P+L      +WTTTPWT+PAN A+A
Sbjct: 206 AELEYNNEHISTSAYIKFPIT----NISNELKDIIPNLNNLSALIWTTTPWTLPANRAIA 261

Query: 118 VNAKLQYAVVEI--QSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT 175
            +  L Y++V+   + L+  DS   A ++S      KD+              +E     
Sbjct: 262 FHQDLTYSIVKCDEEHLIIADSRISALQES----CFKDK-------------AVE----- 299

Query: 176 KLVIKKTLAGSDLENCRYVHPV--DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVT 233
             ++++ +  S L+   Y + +   N     +I  D+++ ESGTGLVH APGHG +DY  
Sbjct: 300 --IVQQNIPNSILKTLTYTNQLRGQNSDAQPLIHADFVSAESGTGLVHCAPGHGMDDYEV 357

Query: 234 SLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYE 288
             + G+  ++PV+D G FT+ A        SG  VL DGN+ V+K L +++  I +  Y+
Sbjct: 358 CTRLGIEAVAPVNDLGCFTDAALPDDPSALSGKSVLNDGNMEVLKILGDRVLFISK--YK 415

Query: 289 HKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           HKYPYDWRTK P I RATEQWFA V   +  A++ +  V ++P
Sbjct: 416 HKYPYDWRTKLPVIVRATEQWFADVGDVKSVALERLNDVSFIP 458



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 162/342 (47%), Gaps = 43/342 (12%)

Query: 337 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYD 396
           G GAD LRLWV+S DYT D++IG  VL  ++    K R T + LLG++H      S    
Sbjct: 645 GLGADALRLWVASSDYTKDLIIGQPVLATVNSALLKYRITFKMLLGSMH-----QSARTS 699

Query: 397 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 456
            L  +D+ AL QL+ ++  +  +Y+SY+F K    I R+I  DLS FY + +KDRLY G 
Sbjct: 700 PLTKLDKIALVQLQTVMAEVEAAYDSYEFNKAVSAINRWIYTDLSAFYLEASKDRLYCGD 759

Query: 457 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 516
                      VL      +++++ PI P L E+VW +LP A+   +     F  E   P
Sbjct: 760 GGG--------VLEEIFHGLLKMLTPITPCLVEEVWNHLP-AWMAAEQPVHPFHREFLDP 810

Query: 517 VLDEKWRTFPVGEIYFWGK----ILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 572
           ++          EI    +    +L  +  +    E AR+ K+IGSSLE+ V +      
Sbjct: 811 IIPSS--RLSAEEISLIEQDIPWLLSAQISIKSAQEEARSEKIIGSSLESSVLI-----D 863

Query: 573 LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEG------KDK 626
           L  + +E+   K  AD L+ IF++S VE       G   +  +S   +  G      + K
Sbjct: 864 LPPKGQEVF--KRYADELENIFVVSSVEFGSDVNRG---DWNFSALLIPPGWHGPNEEGK 918

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAV 668
           VW  V   +  KC RCW Y        E   LC RC + + V
Sbjct: 919 VW--VVPPKDKKCPRCWRYVAP-----EEDELCRRCGDAITV 953


>gi|120553794|ref|YP_958145.1| isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166229746|sp|A1TYY9.1|SYI_MARAV RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|120323643|gb|ABM17958.1| Isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 939

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 198/333 (59%), Gaps = 30/333 (9%)

Query: 4   FKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAEL 63
           F R GV  +W+ PYLT+DP+ EA  +   G++  +G++ RG KPV+WS   ++ALAEAE+
Sbjct: 141 FIRLGVMGEWDKPYLTMDPKVEAGIVRALGKIVAKGHLVRGFKPVYWSVVGQSALAEAEV 200

Query: 64  EYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAK 121
           EY +   S  I   F +V   A   T G  +E   D+ L +WTTTPWT+PAN AV++ A 
Sbjct: 201 EYQD-KTSTQIDVRFTVVDRDAVLKTFG-TSEGEGDVSLVIWTTTPWTIPANQAVSIGAD 258

Query: 122 LQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK 180
           ++YA+V++      D    A +               +I+A+D+V  + A+WG +   + 
Sbjct: 259 IEYALVQV------DVGHGAER---------------MILATDMVQGIMARWGVEDYKVL 297

Query: 181 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 240
              AGS LEN    HPV ++Q PV++ GD+++ ++GTG VHTAP HG ED+V   +YG+ 
Sbjct: 298 ANAAGSALENQLLHHPVYDKQVPVLL-GDHVSLDAGTGAVHTAPDHGMEDFVVGKEYGIG 356

Query: 241 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 300
            L+ V  +G +T+ AG+F+G+ V    +  V   L+ +  L+  E + H YP+ WRTK P
Sbjct: 357 TLNLVKADGTYTDAAGEFAGVHVY-KADEPVCAALEREGKLVRSEKFRHSYPHCWRTKTP 415

Query: 301 TIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 331
            I+RAT QWF S++    R  A++AI  V+WVP
Sbjct: 416 LIYRATPQWFISMDKLNLRADALEAIKGVRWVP 448



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 172/336 (51%), Gaps = 27/336 (8%)

Query: 330 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 388
           + PQE     GAD+LRLWVS+ DY+G++ +   +LRQ +D YR++R T R+LL NL  + 
Sbjct: 614 IAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFD 673

Query: 389 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 447
              + ++ +D+  +D++ + +   +   + E Y +Y F +I+Q +  F    L  FY D+
Sbjct: 674 PDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDI 733

Query: 448 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 507
            KDR YT    S  RRSCQT L     ++VR IAPIL   A+++WQ+LP       G   
Sbjct: 734 IKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADEIWQHLP-------GKRG 786

Query: 508 EFVFESKW-PVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYL 566
           + VF   W   L      F +G  Y W +I  ++  VNK LE  R    I  SL A+V L
Sbjct: 787 DTVFYETWYEGLTALPEGFELGRDY-WREIYAVKEAVNKCLEEVRARGEIKGSLSAEVTL 845

Query: 567 FTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDK 626
           +  + SLA RL  +       + L+ + I S+  V P +    +      G         
Sbjct: 846 YC-EGSLAERLNYL------GEELRFVLITSEATVKPVSEAAGVEQTNLEG--------- 889

Query: 627 VWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRC 662
           + + V+ A  +KCERCW++   VG   ++  LC RC
Sbjct: 890 LLVKVTPATHAKCERCWHHREDVGQNEQYSDLCGRC 925


>gi|395242915|ref|ZP_10419903.1| Isoleucyl-tRNA synthetase [Lactobacillus hominis CRBIP 24.179]
 gi|394484735|emb|CCI80911.1| Isoleucyl-tRNA synthetase [Lactobacillus hominis CRBIP 24.179]
          Length = 934

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 199/340 (58%), Gaps = 45/340 (13%)

Query: 1   MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 60
           MA FKR GV ADW++PY+TL PE+EA +I VFG+M  +GYIY+GKKPV+WS SS + LAE
Sbjct: 136 MADFKRLGVMADWDHPYITLQPEFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAE 195

Query: 61  AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 120
           AE+EY +    R IY  F +        G+L+    D+ L +WTTTPWT+P+N  + VN 
Sbjct: 196 AEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIWTTTPWTIPSNVGITVNP 247

Query: 121 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWG-TKLVI 179
           K  Y+VVE+                         KK   ++ SD +P +    G     +
Sbjct: 248 KFDYSVVEVNG-----------------------KKY--VIGSDRLPAVAEDLGWNDYKV 282

Query: 180 KKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSL 235
            KTL G+D ++  Y HP+ ++    +  +V+   Y+T + GTGLVH A G G++DY    
Sbjct: 283 LKTLKGTDFDHMTYRHPLYDKNGLGEYGLVMNDTYVTDDDGTGLVHNATGFGEDDYNVGR 342

Query: 236 KYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQMSLIMEEPYEHKY 291
           +YG+P+  P+D +G+FT+E       D++G    D N  V + L++  +L+  + + H Y
Sbjct: 343 RYGIPVFGPMDAQGRFTKEV---PDPDLVGMFYDDANKVVAEKLEKAGALLKLDFFTHSY 399

Query: 292 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 331
           P+DWRTKKP I+RAT QWFAS++ FR   +D I +  ++P
Sbjct: 400 PHDWRTKKPVIYRATTQWFASIDKFRDQILDQIEKADFIP 439



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 180/330 (54%), Gaps = 28/330 (8%)

Query: 339 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 397
           GA+++RLWV+S D T DV +  ++LRQ ++ YRK+R T R++L N  D+    ++I+Y D
Sbjct: 619 GAEIIRLWVASADTTSDVAVSQEILRQSAEAYRKIRNTFRFMLANTSDFDPKADTIAYPD 678

Query: 398 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 457
           +  +DQ+   +L  +V+ + ++Y  Y F  +++ +  FI  DLS FY D AKD LY    
Sbjct: 679 MAGVDQFMEVKLNRLVQEVLDAYNKYDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDTQ 738

Query: 458 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 517
            S +RRS QTV+   L+ + +V+ PILPH  E++W     ++  ED    E+V  S  P 
Sbjct: 739 DSESRRSMQTVIYDVLVKLAKVLTPILPHTMEEIW-----SFLKED---EEYVQLSDMPE 790

Query: 518 LDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRL 577
           +D       V  +  W + + +R++V K LEVAR  K+IG S EA + L  +  +     
Sbjct: 791 VDHFANEDEV--LANWTEFMVVRSDVLKALEVARNEKVIGKSFEAHLTLHPNKET----- 843

Query: 578 REMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGS 637
           +E+   K D++ +++I I+S++ +      G       SG+ LVE           AEG 
Sbjct: 844 KELLD-KLDSN-IRQILIVSELTLTDDELTGDNVQDLKSGQILVE----------HAEGE 891

Query: 638 KCERCWNYSTQVGSFVEHPTLCSRCYEVLA 667
            C RC   +  VGS    P LC+RC  ++A
Sbjct: 892 VCPRCRRITNDVGSDARFPDLCARCANIVA 921


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,176,737,640
Number of Sequences: 23463169
Number of extensions: 490342050
Number of successful extensions: 1156863
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12319
Number of HSP's successfully gapped in prelim test: 2813
Number of HSP's that attempted gapping in prelim test: 1085481
Number of HSP's gapped (non-prelim): 40140
length of query: 678
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 528
effective length of database: 8,839,720,017
effective search space: 4667372168976
effective search space used: 4667372168976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)